Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr7

Orthogroup ID

OG0007831

Physical Location & Seq

Genomic Coordinates Forward (+)

15865976 .. 15874970

Gene Structure 8995 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom07g14030.16

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3618 bp

ATGGATTTTGCGTGTAGTTTTCAGCAGCCAAATGTGTTATATGGCAGTGAAGGGGCTAGCTATAAGAGGTTGAATTGCCTTAGTAGTTCACCGATTATCTTTGGGAGTAAAGATGTTAGTTGTAACTTTCTGCGTAATTCGAGGATTGTTGTGAAAGCATGTTCAGGTAAGAAGTTGAAGAGAACTGTCTGTGTAAGTGGTTGTAGGATTTCACGTTTGACCTATAGAGAAAAAGCTGACGATCGTTTGTGGAATTTGAATCCAAAAGTGCCTTTATCTTGTAACTTTGGTAGTGTTTTCAAAGGGTCAAGAACAGTTTGGTGGTCGCGGTGTCAGAGTAATGACTCATTAGAGTATGTTAATGGAAATGGTCAGAATGTGGAATACCCAGAAGGTCATGATGAGAGCTCAGGAGTTGGGTCTGTTCATGATGCCGAGTTGAGTGATTCCAGAGAAGAGGATGGATATGAAGAACAAAAAGAACCAGAGGCACCTACATTGGATGAATTGAAGGAATTGCTGCAAAATGCCATGAAAGAACTTGAAGCTGCACGACTTAATAGTACCATGTTTGAAGAAAAGGCTCAGAGAATATCAGAAGCTGCGATATGCCTACAGGATGGAGCAGCAAATGCTTGGAATAATGTTAACTCAGCCCTTGATAGTGTCCAAGAGATCGTTCATGAAGAGACTATTGCCAAAGAAGGTGTTCAGAAAGCAAAAATAGCACTTTCATTAGCAGAGGCAAGGCTTCAGGTGGCAGTAGAATCTTTACAGGTTGCAAAAAGAGAGACCAATTCTTCTGAAATTTCACAAGAGAATGATGGGGAATATGATTTCAAAGAAGAAGAAAAAGCACTTTTGGTTGCCCAGGAAGATATTAAGGAATGCCAGGCGAATTTGGCCAACTGTGAGGCAGAGCTAATGCACTTGCATAGTAAAAAAGAGGAGTTGCAGAAGGAAGTGGACTGGTTGAATGAGGTTGCAGAGAAAGCACAGCTCAGTGCTTTGAAAGCAGAAGAGGATGTAACCAACATAATGCTTTTAGCAGAGCAAGCTGTTGCTTTTGAACTTGAAGCTGCAAAGCATGTCAACGATGCAGAAATTGCATTACAAAGAGTAGTCAAATCTATCTCCAACTCAATTGTTGACACCACAGAAAACAACCAAGGACAGGTGCTGAGTGATGATAATGCTGCTCTTGAGGAAGAGGAGACGGTAGTCCTAGGAAGTTCTGCTGATATCATTGTTGAAAGGGACAGAGATGTGGTAATTGATGGTGATTTGTTGGCTGTCAAGCCTTTGGCAGACAGCCCTTCTGACAAAATCAGCCGGAGTTTTGAAGACGCAAATGAATTTGTTGATTTGAATGATCATGAGAATGGAAAGTTAAGTCTGGATTCTCTAAAAGATGCTGACGTAGAAGCTGAAATGTCAAAGAATGTGGTTCAAGCCAAAAAGCAGGAAACTCAGAAGGACTTGAGTAGGGAGAGTTCACCATTAAATTCTCCAAAGACATTATCGAAGAAATCTTCTCGTTTCTTTTCTGCATCTTTCTTCTCTTCTGCAGATGGGACTCCGACACCAGTTTTCCAAGGTCTGATGGAGTATGTAAGGAAGCAATGGTCAATGCTGGTTGTTGGGATGTTCCTATTTGGAGTAGGGCTCACGTTTTATGCTAATCGAGTGGAAAGGGCCACACAACTGTTACAACAGCCAGACGTCATCACCACTAGTATTGAAGAAGTTTCCTCAACTGCGAAGCCTCTAGTTCGAGAATTACAGAAACTCCCTAGAAGAATTAAAAAACTAATTGATATGATTCCTCATCAAGAGGTGAATGAGGAGGAAGCTTCTCTTTTTGACATGTTATGGTTATTGTTAGCAAGTGTGATATTTGTGCCTGTATTTCAAAGAATTCCTGGAGGCAGTCCTGTTCTTGGGTACTTAGCTGCTGGCATCTTGATTGGGCCTTATGGCCTTTCTATTATTCGTCATGTACATGGGACAAAGGCAATTGCTGAATTTGGGGTTGTTTTCTTGCTGTTCAACATTGGCCTCGAGCTTTCTGTTGAAAGGTTGAGTTCAATGAAGAAATACGTATTTGGATTAGGCTCTGCTCAGGTTTTGGTGACAGCTGTTGTTATTGGTGTGGTTGCTCATTATGTTTGTGGGCTGCCTGGTCCTGCTGCAATAGTAATTGGCAATGGTCTGGCTTTATCATCCACTGCAGTTGTTCTGCAGGTCTTGCAAGAGCGGGGTGAGAGCACTTCGCGTCATGGCCGTGCTACGTTTTCTGTCCTACTTTTCCAGGATTTGGCTGTTGTGGTTTTGCTGATTCTTATACCTCTGATTTCACCAAATTCATCCAAAGGAGGGATTGGTGTTCAAGCCATTGCTGAAGCTCTTGGACTTGCTGCTGTAAAGGCAGCAGTTGCCATCACGGCCATAATTGCTGGTGGACGCTTGCTGCTTCGACCAATTTATAGGCAAATTGCAGAAAATCAAAATGCAGAAATATTTTCCGCCAATACTTTGCTTGTTATTCTAGGAACAAGTCTTCTCACTGCCAGGGCTGGACTATCCATGGCATTGGGAGCATTTTTGGCTGGTTTGCTTCTTGCAGAAACTGAATTTTCTTTACAGGTTGAGTCAGATATTGCTCCATATCGTGGTCTTCTACTGGGTCTCTTCTTTATGACGGTTGGAATGTCTATTGATCCGAAACTTCTTCTTTCAAACTTCCCGGTTATAGCTGGATCACTAGGACTTCTGATTGGTGGCAAATCCTTATTGGTTGGTTTGATTGGCAAACTGTTTGGCGTTTCAATAATATCTGCAATAAGAGTTGGTCTTCTTCTTGCTCCTGGTGGAGAGTTTGCATTTGTTGCATTTGGTGAAGCTGTTAATCAGGGAATAATGACTCCTCAGTTATCATCTTTGCTCTTCCTTGTCGTTGGAATTTCAATGGCCATCACACCATGGCTAGCTGCTGGAGGGCAGTTAATTGCATCTCGTTTTGAGGTGCATGACGTTCGAAGTTTACTACCAATAATTGCGCAGCTTCTTTCTGAGAGTCTAATTCCATTTGTAGCTCTTGATGTGAGGAGTGATAGAGTGGCAGTCGGACGCTCGCTGGACCTTCCAGTCTACTTTGGAGATGCTGGTAGCCGAGAGGTGCTCCACAAAGTTGGTGCTGAAAGAGCATGCGCTGCAGCAATCACTTTAGATTCTCCTGGTGCAAACTATAGAACTGTTTGGGCTCTGAGCAAGTATTTCCCTAATGTGAAAACTTTTGTTCGTGCTCATGATGTTGATCATGGTCTTAATTTGGAGAAGGCTGGGGCTACAGCGGTTGTCCCAGAGACCTTGGAACCTAGTCTACAGTTGGCAGCTGCTGTTCTAGCTCAGGCTAAGCTACCCATGTCAGAGATCGCATCAACAATCAATGCGTATAGGTCCCGTCACCTTGCTGAGCTAACTGAGGTACTCCACTTATGTGAAACTAGCGGCAGTTCTCTTGGCTACGGGTTTTCTCGAATGATGAGTAAACCCAAAACTCCAACTCCGGATTCCACAGATGAGAACCAGTTCACTGAAGGAACACTGGCAATCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005451 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006996 GO:0008150 GO:0008324 GO:0009507 GO:0009526 GO:0009536 GO:0009657 GO:0009658 GO:0009941 GO:0009987 GO:0010109 GO:0015075 GO:0015077 GO:0015078 GO:0015079 GO:0015291 GO:0015297 GO:0015298 GO:0015299 GO:0015318 GO:0015386 GO:0015491 GO:0015672 GO:0016020 GO:0016043 GO:0019222 GO:0022804 GO:0022821 GO:0022857 GO:0022890 GO:0030001 GO:0031090 GO:0031323 GO:0031967 GO:0031969 GO:0031975 GO:0034220 GO:0042170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046873 GO:0050789 GO:0050794 GO:0051179 GO:0051234 GO:0055085 GO:0065007 GO:0071804 GO:0071805 GO:0071840 GO:0098655 GO:0098660 GO:0098662 GO:0099516 GO:1902600

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MutS_I MutS_II MutS_III MutS_V Na_H_Exchanger TrkA_N

Protein Analysis

1206

Amino Acids

130.35

Weight (kDa)

5.07

Isoelectric Point (pI)

39.39

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007831)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G00630 AT4G00630
fragaria_vesca	FvH4_7g13660 FvH4_7g13660 FvH4_7g13660 FvH4_7g13660 FvH4_7g13660
malus_domestica	MD01G1053700.v1.1 MD07G1141400.v1.1
prunus_persica	Prupe.2G162700_v2.0.a1 Prupe.2G162700_v2.0.a1
pyrus_communis	pycom01g07930 pycom07g14030
rosa_chinensis	RchiOBHm_Chr1g0353741
rosa_laevigata	RLG00000028262
rosa_multiflora	Rmu_sc0005947.1_g000021
rosa_roxburghii	Rroxscaffold_4G00301700
rosa_rugosa	Rorug01G0237300 Rorug01G0237300
rosa_samantha	Rh1AG249500 Rh1BG219600 Rh1CG232200 Rh1DG246600
rosa_wichuraiana	Rw1G021770

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	3146
AatII	GACGTC	1 cut(s)	1725
Acc16I	TGCGCA	1 cut(s)	3060
Acc36I	ACCTGC	1 cut(s)	2233
AccB1I	GGYRCC	1 cut(s)	490
AccB7I	CCANNNNNTGG	2 cut(s)	2317, 2672
AccBSI	CCGCTC	1 cut(s)	2257
AccI	GTMKAC	2 cut(s)	3150, 3382
AccII	CGCG	2 cut(s)	328, 2275
AccIII	TCCGGA	1 cut(s)	3568
AciI	CCGC	5 cut(s)	328, 2257, 2526, 3353, 3510
AclWI	GGATC	2 cut(s)	2714, 2767
AcoI	YGGCCR	4 cut(s)	903, 2281, 2445, 2970
AcuI	CTGAAG	3 cut(s)	737, 2421, 3618
AcyI	GRCGYC	1 cut(s)	1722
AfaI	GTAC	4 cut(s)	565, 1946, 2001, 3489
AfiI	CCNNNNNNNGG	5 cut(s)	1174, 1940, 2317, 2376, 2672
AflIII	ACRYGT	1 cut(s)	1866
AhlI	ACTAGT	1 cut(s)	1733
AjnI	CCWGG	8 cut(s)	870, 891, 1921, 2179, 2310, 2570, 2866, 3235
AjuI	GAANNNNNNNTTGG	4 cut(s)	663, 695, 3556, 3588
AleI	CACNNNNGTG	1 cut(s)	3498
Alw21I	GWGCWC	4 cut(s)	410, 2270, 3183, 3307
Alw26I	GTCTC	5 cut(s)	683, 785, 1208, 2693, 3359
AlwI	GGATC	2 cut(s)	2714, 2767
AlwNI	CAGNNNCTG	4 cut(s)	602, 1180, 2630, 3398
Ama87I	CYCGRG	1 cut(s)	2060
Aor13HI	TCCGGA	1 cut(s)	3568
AoxI	GGCC	8 cut(s)	903, 1695, 1970, 1978, 2056, 2281, 2445, 2970
Asp700I	GAANNNNTTC	2 cut(s)	708, 3590
AspA2I	CCTAGG	1 cut(s)	1225
AspLEI	GCGC	2 cut(s)	3061, 3212
AspS9I	GGNCC	5 cut(s)	1695, 1970, 2183, 3139, 3459
AsuC2I	CCSGG	1 cut(s)	2747
AsuII	TTCGAA	1 cut(s)	3037
AsuNHI	GCTAGC	2 cut(s)	56, 2986
AvaI	CYCGRG	1 cut(s)	2060
AvaII	GGWCC	3 cut(s)	2183, 3139, 3459
AvrII	CCTAGG	1 cut(s)	1225
BalI	TGGCCA	2 cut(s)	905, 2972
BanI	GGYRCC	1 cut(s)	490
BanII	GRGCYC	3 cut(s)	410, 1668, 3265
BbsI	GAAGAC	4 cut(s)	1350, 2552, 2669, 2846
Bbv12I	GWGCWC	4 cut(s)	410, 2270, 3183, 3307
BccI	CCATC	8 cut(s)	455, 614, 818, 1271, 1565, 1597, 2447, 2981
BceAI	ACGGC	2 cut(s)	2268, 2460
BcgI	CGANNNNNNTGC	2 cut(s)	3017, 3051
BciT130I	CCWGG	8 cut(s)	872, 893, 1923, 2181, 2312, 2572, 2868, 3237
BclI	TGATCA	2 cut(s)	1372, 3316
BcnI	CCSGG	1 cut(s)	2747
BcoDI	GTCTC	5 cut(s)	683, 785, 1208, 2693, 3359
BcuI	ACTAGT	1 cut(s)	1733
BfmI	CTRYAG	9 cut(s)	223, 614, 1566, 2229, 2240, 3213, 3247, 3348, 3383
BfuAI	ACCTGC	1 cut(s)	2233
BglI	GCCNNNNNGGC	1 cut(s)	2444
BlnI	CCTAGG	1 cut(s)	1225
BlpI	GCTNAGC	2 cut(s)	3414, 3474
Bme1390I	CCNGG	9 cut(s)	872, 893, 1923, 2181, 2312, 2572, 2747, 2868, 3237
Bme18I	GGWCC	3 cut(s)	2183, 3139, 3459
BmeT110I	CYCGRG	1 cut(s)	2060
BmgT120I	GGNCC	5 cut(s)	1695, 1970, 2183, 3139, 3459
BmiI	GGNNCC	3 cut(s)	492, 3375, 3461
BmrFI	CCNGG	9 cut(s)	872, 893, 1923, 2181, 2312, 2572, 2747, 2868, 3237
BmrI	ACTGGG	1 cut(s)	2693
BmsI	GCATC	8 cut(s)	421, 1087, 1402, 1559, 1968, 3020, 3151, 3446
BmtI	GCTAGC	2 cut(s)	60, 2990
BmuI	ACTGGG	1 cut(s)	2693
BoxI	GACNNNNGTC	1 cut(s)	1220
BpiI	GAAGAC	4 cut(s)	1350, 2552, 2669, 2846
BplI	GAGNNNNNCTC	4 cut(s)	1650, 1682, 3165, 3197
BpmI	CTGGAG	2 cut(s)	1944, 3015
Bpu10I	CCTNAGC	3 cut(s)	409, 2121, 3408
Bpu1102I	GCTNAGC	2 cut(s)	3414, 3474
Bpu14I	TTCGAA	1 cut(s)	3037
BpuEI	CTTGAG	2 cut(s)	1223, 1501
BpuMI	CCSGG	1 cut(s)	2747
BsaAI	YACGTR	1 cut(s)	2101
BsaBI	GATNNNNATC	1 cut(s)	3315
BsaHI	GRCGYC	1 cut(s)	1722
BsaI	GGTCTC	3 cut(s)	785, 2693, 3359
BsaJI	CCNNGG	8 cut(s)	870, 1168, 1225, 1594, 2571, 2586, 2981, 3369
BsaWI	WCCGGW	1 cut(s)	3568
BsaXI	ACNNNNNCTCC	4 cut(s)	1773, 1803, 3550, 3580
Bsc4I	CCNNNNNNNGG	5 cut(s)	1174, 1940, 2317, 2376, 2672
Bse1I	ACTGG	6 cut(s)	974, 1586, 2688, 3146, 3589, 3612
Bse3DI	GCAATG	3 cut(s)	1628, 2212, 2394
Bse8I	GATNNNNATC	1 cut(s)	3315
BseAI	TCCGGA	1 cut(s)	3568
BseBI	CCWGG	8 cut(s)	872, 893, 1923, 2181, 2312, 2572, 2868, 3237
BseDI	CCNNGG	8 cut(s)	870, 1168, 1225, 1594, 2571, 2586, 2981, 3369
BseGI	GGATG	7 cut(s)	466, 508, 625, 1030, 1650, 2222, 2366
BseJI	GATNNNNATC	1 cut(s)	3315
BseLI	CCNNNNNNNGG	5 cut(s)	1174, 1940, 2317, 2376, 2672
BseMI	GCAATG	3 cut(s)	1628, 2212, 2394
BseNI	ACTGG	6 cut(s)	974, 1586, 2688, 3146, 3589, 3612
BseRI	GAGGAG	5 cut(s)	962, 1226, 1859, 2916, 3121
BseYI	CCCAGC	1 cut(s)	3341
BsgI	GTGCAG	1 cut(s)	534
Bsh1236I	CGCG	2 cut(s)	328, 2275
Bsh1285I	CGRYCG	1 cut(s)	244
BshFI	GGCC	8 cut(s)	905, 1697, 1972, 1980, 2058, 2283, 2447, 2972
BshNI	GGYRCC	1 cut(s)	490
BsiEI	CGRYCG	1 cut(s)	244
BsiHKAI	GWGCWC	4 cut(s)	410, 2270, 3183, 3307
BsiHKCI	CYCGRG	1 cut(s)	2060
BsiSI	CCGG	3 cut(s)	1333, 2747, 3569
BslFI	GGGAC	5 cut(s)	1271, 1588, 2020, 3344, 3445
BslI	CCNNNNNNNGG	5 cut(s)	1174, 1940, 2317, 2376, 2672
BsmAI	GTCTC	5 cut(s)	683, 785, 1208, 2693, 3359
BsmBI	CGTCTC	1 cut(s)	1208
BsmFI	GGGAC	5 cut(s)	1271, 1588, 2020, 3344, 3445
BsmI	GAATGC	1 cut(s)	893
BsnI	GGCC	8 cut(s)	905, 1697, 1972, 1980, 2058, 2283, 2447, 2972
Bso31I	GGTCTC	3 cut(s)	785, 2693, 3359
BsoBI	CYCGRG	1 cut(s)	2060
Bsp119I	TTCGAA	1 cut(s)	3037
Bsp1286I	GDGCHC	6 cut(s)	410, 1668, 2270, 3183, 3265, 3307
Bsp13I	TCCGGA	1 cut(s)	3568
Bsp1407I	TGTACA	1 cut(s)	1999
Bsp143I	GATC	7 cut(s)	241, 675, 1372, 2719, 2759, 3316, 3432
Bsp1720I	GCTNAGC	2 cut(s)	3414, 3474
Bsp19I	CCATGG	2 cut(s)	2586, 2981
BspACI	CCGC	5 cut(s)	328, 2257, 2526, 3353, 3510
BspANI	GGCC	8 cut(s)	905, 1697, 1972, 1980, 2058, 2283, 2447, 2972
BspEI	TCCGGA	1 cut(s)	3568
BspFNI	CGCG	2 cut(s)	328, 2275
BspHI	TCATGA	5 cut(s)	397, 427, 682, 1375, 3307
BspLI	GGNNCC	3 cut(s)	492, 3375, 3461
BspMAI	CTGCAG	4 cut(s)	1570, 2233, 2244, 3217
BspMI	ACCTGC	1 cut(s)	2233
BspOI	GCTAGC	2 cut(s)	60, 2990
BspPI	GGATC	2 cut(s)	2714, 2767
BspQI	GCTCTTC	1 cut(s)	2951
BspT104I	TTCGAA	1 cut(s)	3037
BspT107I	GGYRCC	1 cut(s)	490
BspTNI	GGTCTC	3 cut(s)	785, 2693, 3359
BsrBI	CCGCTC	1 cut(s)	2257
BsrDI	GCAATG	3 cut(s)	1628, 2212, 2394
BsrGI	TGTACA	1 cut(s)	1999
BsrI	ACTGG	6 cut(s)	974, 1586, 2688, 3146, 3589, 3612
BssECI	CCNNGG	8 cut(s)	870, 1168, 1225, 1594, 2571, 2586, 2981, 3369
BssMI	GATC	7 cut(s)	241, 675, 1372, 2719, 2759, 3316, 3432
BssNI	GRCGYC	1 cut(s)	1722
BssT1I	CCWWGG	6 cut(s)	1168, 1225, 1594, 2586, 2981, 3369
Bst2UI	CCWGG	8 cut(s)	872, 893, 1923, 2181, 2312, 2572, 2868, 3237
Bst4CI	ACNGT	9 cut(s)	187, 316, 911, 1219, 1707, 2704, 2817, 3256, 3387
Bst6I	CTCTTC	8 cut(s)	173, 450, 681, 1014, 1203, 1567, 2696, 2951
BstACI	GRCGYC	1 cut(s)	1722
BstAPI	GCANNNNNTGC	6 cut(s)	632, 1106, 2248, 2435, 2888, 3212
BstAUI	TGTACA	1 cut(s)	1999
BstBAI	YACGTR	1 cut(s)	2101
BstBI	TTCGAA	1 cut(s)	3037
BstC8I	GCNNGC	7 cut(s)	58, 1056, 1957, 2468, 2988, 3134, 3208
BstDSI	CCRYGG	2 cut(s)	2586, 2981
BstF5I	GGATG	7 cut(s)	466, 508, 625, 1030, 1650, 2222, 2366
BstFNI	CGCG	2 cut(s)	328, 2275
BstHHI	GCGC	2 cut(s)	3061, 3212
BstKTI	GATC	7 cut(s)	244, 678, 1375, 2722, 2762, 3319, 3435
BstMAI	GTCTC	5 cut(s)	683, 785, 1208, 2693, 3359
BstMBI	GATC	7 cut(s)	241, 675, 1372, 2719, 2759, 3316, 3432
BstMCI	CGRYCG	1 cut(s)	244
BstNI	CCWGG	8 cut(s)	872, 893, 1923, 2181, 2312, 2572, 2868, 3237
BstNSI	RCATGY	4 cut(s)	162, 1091, 1870, 3210
BstPAI	GACNNNNGTC	1 cut(s)	1220
BstSCI	CCNGG	9 cut(s)	870, 891, 1921, 2179, 2310, 2570, 2745, 2866, 3235
BstSFI	CTRYAG	9 cut(s)	223, 614, 1566, 2229, 2240, 3213, 3247, 3348, 3383
BstSNI	TACGTA	1 cut(s)	2101
BstUI	CGCG	2 cut(s)	328, 2275
BstV2I	GAAGAC	4 cut(s)	1350, 2552, 2669, 2846
BstXI	CCANNNNNNTGG	2 cut(s)	2593, 3191
BsuRI	GGCC	8 cut(s)	905, 1697, 1972, 1980, 2058, 2283, 2447, 2972
BtgI	CCRYGG	2 cut(s)	2586, 2981
BtsCI	GGATG	7 cut(s)	466, 508, 625, 1030, 1650, 2222, 2366
BtsI	GCAGTG	3 cut(s)	52, 2226, 2565
BtsIMutI	CAGTG	6 cut(s)	52, 1009, 2226, 2565, 3594, 3605
BveI	ACCTGC	1 cut(s)	2233
Cac8I	GCNNGC	7 cut(s)	58, 1056, 1957, 2468, 2988, 3134, 3208
CaiI	CAGNNNCTG	4 cut(s)	602, 1180, 2630, 3398
CciI	TCATGA	5 cut(s)	397, 427, 682, 1375, 3307
CfoI	GCGC	2 cut(s)	3061, 3212
Cfr13I	GGNCC	5 cut(s)	1695, 1970, 2183, 3139, 3459
CseI	GACGC	4 cut(s)	1355, 2264, 2472, 3138
Csp6I	GTAC	4 cut(s)	564, 1945, 2000, 3488
CspCI	CAANNNNNGTGG	6 cut(s)	1425, 1460, 1720, 1755, 2215, 2250
CviQI	GTAC	4 cut(s)	564, 1945, 2000, 3488
DpnI	GATC	7 cut(s)	243, 677, 1374, 2721, 2761, 3318, 3434
DpnII	GATC	7 cut(s)	241, 675, 1372, 2719, 2759, 3316, 3432
DrdI	GACNNNNNNGTC	1 cut(s)	3146
DseDI	GACNNNNNNGTC	1 cut(s)	3146
EaeI	YGGCCR	4 cut(s)	903, 2281, 2445, 2970
Eam1104I	CTCTTC	8 cut(s)	173, 450, 681, 1014, 1203, 1567, 2696, 2951
EarI	CTCTTC	8 cut(s)	173, 450, 681, 1014, 1203, 1567, 2696, 2951
EciI	GGCGGA	1 cut(s)	2515
Ecl136II	GAGCTC	1 cut(s)	408
Eco105I	TACGTA	1 cut(s)	2101
Eco130I	CCWWGG	6 cut(s)	1168, 1225, 1594, 2586, 2981, 3369
Eco24I	GRGCYC	3 cut(s)	410, 1668, 3265
Eco31I	GGTCTC	3 cut(s)	785, 2693, 3359
Eco32I	GATATC	1 cut(s)	1243
Eco47I	GGWCC	3 cut(s)	2183, 3139, 3459
Eco53kI	GAGCTC	1 cut(s)	408
Eco57I	CTGAAG	3 cut(s)	737, 2421, 3618
Eco88I	CYCGRG	1 cut(s)	2060
EcoICRI	GAGCTC	1 cut(s)	408
EcoO109I	RGGNCCY	1 cut(s)	3459
EcoRI	GAATTC	1 cut(s)	1917
EcoRII	CCWGG	8 cut(s)	870, 891, 1921, 2179, 2310, 2570, 2866, 3235
EcoRV	GATATC	1 cut(s)	1243
EcoT14I	CCWWGG	6 cut(s)	1168, 1225, 1594, 2586, 2981, 3369
EcoT38I	GRGCYC	3 cut(s)	410, 1668, 3265
ErhI	CCWWGG	6 cut(s)	1168, 1225, 1594, 2586, 2981, 3369
Esp3I	CGTCTC	1 cut(s)	1208
FalI	AAGNNNNNCTT	2 cut(s)	1842, 1874
FaqI	GGGAC	5 cut(s)	1271, 1588, 2020, 3344, 3445
FauI	CCCGC	1 cut(s)	2250
FbaI	TGATCA	2 cut(s)	1372, 3316
FblI	GTMKAC	2 cut(s)	3150, 3382
FokI	GGATG	7 cut(s)	473, 515, 632, 1037, 1657, 2209, 2353
FriOI	GRGCYC	3 cut(s)	410, 1668, 3265
FspI	TGCGCA	1 cut(s)	3060
GlaI	GCGC	2 cut(s)	3060, 3211
GsaI	CCCAGC	1 cut(s)	3345
GsuI	CTGGAG	2 cut(s)	1944, 3015
HaeIII	GGCC	8 cut(s)	905, 1697, 1972, 1980, 2058, 2283, 2447, 2972
HapII	CCGG	3 cut(s)	1333, 2747, 3569
HgaI	GACGC	4 cut(s)	1355, 2264, 2472, 3138
HhaI	GCGC	2 cut(s)	3061, 3212
Hin1I	GRCGYC	1 cut(s)	1722
Hin6I	GCGC	2 cut(s)	3059, 3210
HinP1I	GCGC	2 cut(s)	3059, 3210
HincII	GTYRAC	3 cut(s)	649, 1093, 1150
HindII	GTYRAC	3 cut(s)	649, 1093, 1150
HindIII	AAGCTT	1 cut(s)	1851
HpaI	GTTAAC	1 cut(s)	649
HpaII	CCGG	3 cut(s)	1333, 2747, 3569
HpyCH4III	ACNGT	9 cut(s)	187, 316, 911, 1219, 1707, 2704, 2817, 3256, 3387
HpyCH4IV	ACGT	7 cut(s)	214, 1419, 1670, 1722, 2100, 2291, 3033
HpySE526I	ACGT	7 cut(s)	214, 1419, 1670, 1722, 2100, 2291, 3033
Hsp92I	GRCGYC	1 cut(s)	1722
HspAI	GCGC	2 cut(s)	3059, 3210
Kpn2I	TCCGGA	1 cut(s)	3568
Ksp22I	TGATCA	2 cut(s)	1372, 3316
KspAI	GTTAAC	1 cut(s)	649
Kzo9I	GATC	7 cut(s)	241, 675, 1372, 2719, 2759, 3316, 3432
LguI	GCTCTTC	1 cut(s)	2951
LmnI	GCTCC	5 cut(s)	623, 2597, 2668, 2869, 3186
LweI	GCATC	8 cut(s)	421, 1087, 1402, 1559, 1968, 3020, 3151, 3446
MaeII	ACGT	7 cut(s)	214, 1419, 1670, 1722, 2100, 2291, 3033
MaeIII	GTNAC	6 cut(s)	122, 281, 1027, 1707, 2131, 3464
MalI	GATC	7 cut(s)	243, 677, 1374, 2721, 2761, 3318, 3434
MbiI	CCGCTC	1 cut(s)	2257
MboI	GATC	7 cut(s)	241, 675, 1372, 2719, 2759, 3316, 3432
MfeI	CAATTG	2 cut(s)	1143, 2016
MhlI	GDGCHC	6 cut(s)	410, 1668, 2270, 3183, 3265, 3307
MlsI	TGGCCA	2 cut(s)	905, 2972
MluNI	TGGCCA	2 cut(s)	905, 2972
MlyI	GAGTC	5 cut(s)	338, 1570, 2660, 2917, 3085
MmeI	TCCRAC	6 cut(s)	1161, 1604, 2686, 2938, 3106, 3587
Mox20I	TGGCCA	2 cut(s)	905, 2972
MroI	TCCGGA	1 cut(s)	3568
MroXI	GAANNNNTTC	2 cut(s)	708, 3590
MscI	TGGCCA	2 cut(s)	905, 2972
MslI	CAYNNNNRTG	4 cut(s)	1380, 2001, 2283, 3498
Msp20I	TGGCCA	2 cut(s)	905, 2972
MspA1I	CMGCKG	3 cut(s)	2138, 3353, 3395
MspI	CCGG	3 cut(s)	1333, 2747, 3569
MspR9I	CCNGG	9 cut(s)	872, 893, 1923, 2181, 2312, 2572, 2747, 2868, 3237
MunI	CAATTG	2 cut(s)	1143, 2016
Mva1269I	GAATGC	1 cut(s)	893
MvaI	CCWGG	8 cut(s)	872, 893, 1923, 2181, 2312, 2572, 2868, 3237
MvnI	CGCG	2 cut(s)	328, 2275
NciI	CCSGG	1 cut(s)	2747
NcoI	CCATGG	2 cut(s)	2586, 2981
NdeII	GATC	7 cut(s)	241, 675, 1372, 2719, 2759, 3316, 3432
NheI	GCTAGC	2 cut(s)	56, 2986
NlaIV	GGNNCC	3 cut(s)	492, 3375, 3461
NmeAIII	GCCGAG	2 cut(s)	460, 3197
NmuCI	GTSAC	2 cut(s)	2131, 3464
NsbI	TGCGCA	1 cut(s)	3060
NspI	RCATGY	4 cut(s)	162, 1091, 1870, 3210
NspV	TTCGAA	1 cut(s)	3037
OliI	CACNNNNGTG	1 cut(s)	3498
PaeI	GCATGC	1 cut(s)	3210
PaeR7I	CTCGAG	1 cut(s)	2060
PagI	TCATGA	5 cut(s)	397, 427, 682, 1375, 3307
PciI	ACATGT	1 cut(s)	1866
PciSI	GCTCTTC	1 cut(s)	2951
PctI	GAATGC	1 cut(s)	893
PdmI	GAANNNNTTC	2 cut(s)	708, 3590
PfeI	GAWTC	8 cut(s)	259, 446, 767, 1400, 1822, 2338, 3230, 3572
PflMI	CCANNNNNTGG	2 cut(s)	2317, 2672
PfoI	TCCNGGA	2 cut(s)	1921, 2310
Ple19I	CGATCG	1 cut(s)	244
PleI	GAGTC	5 cut(s)	338, 1570, 2659, 2917, 3084
PpsI	GAGTC	5 cut(s)	338, 1570, 2659, 2917, 3084
Ppu21I	YACGTR	1 cut(s)	2101
PpuMI	RGGWCCY	1 cut(s)	3459
PscI	ACATGT	1 cut(s)	1866
PshAI	GACNNNNGTC	1 cut(s)	1220
Psp124BI	GAGCTC	1 cut(s)	410
Psp5II	RGGWCCY	1 cut(s)	3459
Psp6I	CCWGG	8 cut(s)	870, 891, 1921, 2179, 2310, 2570, 2866, 3235
PspFI	CCCAGC	1 cut(s)	3341
PspGI	CCWGG	8 cut(s)	870, 891, 1921, 2179, 2310, 2570, 2866, 3235
PspN4I	GGNNCC	3 cut(s)	492, 3375, 3461
PspPI	GGNCC	5 cut(s)	1695, 1970, 2183, 3139, 3459
PspPPI	RGGWCCY	1 cut(s)	3459
PspXI	VCTCGAGB	1 cut(s)	2060
PsrI	GAACNNNNNNTAC	4 cut(s)	1477, 1509, 3366, 3398
PstI	CTGCAG	4 cut(s)	1570, 2233, 2244, 3217
PstNI	CAGNNNCTG	4 cut(s)	602, 1180, 2630, 3398
PvuI	CGATCG	1 cut(s)	244
PvuII	CAGCTG	2 cut(s)	2138, 3395
RsaI	GTAC	4 cut(s)	565, 1946, 2001, 3489
RsaNI	GTAC	4 cut(s)	564, 1945, 2000, 3488
RseI	CAYNNNNRTG	4 cut(s)	1380, 2001, 2283, 3498
SacI	GAGCTC	1 cut(s)	410
SapI	GCTCTTC	1 cut(s)	2951
Sau3AI	GATC	7 cut(s)	241, 675, 1372, 2719, 2759, 3316, 3432
Sau96I	GGNCC	5 cut(s)	1695, 1970, 2183, 3139, 3459
SchI	GAGTC	5 cut(s)	338, 1570, 2660, 2917, 3085
ScrFI	CCNGG	9 cut(s)	872, 893, 1923, 2181, 2312, 2572, 2747, 2868, 3237
SduI	GDGCHC	6 cut(s)	410, 1668, 2270, 3183, 3265, 3307
SfaNI	GCATC	8 cut(s)	421, 1087, 1402, 1559, 1968, 3020, 3151, 3446
SfcI	CTRYAG	9 cut(s)	223, 614, 1566, 2229, 2240, 3213, 3247, 3348, 3383
Sfr274I	CTCGAG	1 cut(s)	2060
SfuI	TTCGAA	1 cut(s)	3037
SinI	GGWCC	3 cut(s)	2183, 3139, 3459
SlaI	CTCGAG	1 cut(s)	2060
SmiMI	CAYNNNNRTG	4 cut(s)	1380, 2001, 2283, 3498
SmlI	CTYRAG	3 cut(s)	1202, 1480, 2060
SmoI	CTYRAG	3 cut(s)	1202, 1480, 2060
SnaBI	TACGTA	1 cut(s)	2101
SpeI	ACTAGT	1 cut(s)	1733
SphI	GCATGC	1 cut(s)	3210
SsiI	CCGC	5 cut(s)	328, 2257, 2526, 3353, 3510
SspI	AATATT	1 cut(s)	2520
SstI	GAGCTC	1 cut(s)	410
StyD4I	CCNGG	9 cut(s)	870, 891, 1921, 2179, 2310, 2570, 2745, 2866, 3235
StyI	CCWWGG	6 cut(s)	1168, 1225, 1594, 2586, 2981, 3369
TaaI	ACNGT	9 cut(s)	187, 316, 911, 1219, 1707, 2704, 2817, 3256, 3387
TaiI	ACGT	7 cut(s)	217, 1422, 1673, 1725, 2103, 2294, 3036
TaqI	TCGA	8 cut(s)	140, 1523, 1684, 1774, 2061, 2476, 3037, 3538
TatI	WGTACW	1 cut(s)	1999
TauI	GCSGC	1 cut(s)	3513
TfiI	GAWTC	8 cut(s)	259, 446, 767, 1400, 1822, 2338, 3230, 3572
TscAI	CASTG	6 cut(s)	52, 1009, 2233, 2572, 3601, 3612
TseFI	GTSAC	2 cut(s)	2131, 3464
Tsp45I	GTSAC	2 cut(s)	2131, 3464
TspRI	CASTG	6 cut(s)	52, 1009, 2233, 2572, 3601, 3612
Van91I	CCANNNNNTGG	2 cut(s)	2317, 2672
VpaK11BI	GGWCC	3 cut(s)	2183, 3139, 3459
XceI	RCATGY	4 cut(s)	162, 1091, 1870, 3210
XhoI	CTCGAG	1 cut(s)	2060
XmaJI	CCTAGG	1 cut(s)	1225
XmiI	GTMKAC	2 cut(s)	3150, 3382
XmnI	GAANNNNTTC	2 cut(s)	708, 3590
ZraI	GACGTC	1 cut(s)	1723

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.