FvH4_7g13660

) efflux antiporter

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Reverse (-)
12226715 .. 12239046
12332 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g13660.t3

Sequence Viewer

Length: 3564 bp
ATGGATCTTGCGTGTAGTTTTCGCCAGCCGAATGTGTTGTGTGGAAGTGAAGGGGTAAGTAGTAGGAAGTTGAATGGTGTTGATTCACATATTTTGTTTGGGAGTAGAGATGGTGGTGGGGTTGGTTTTCGGGGGAATTCGAGAGTTGTTGTGAAGGCGTGTTTGGGGAAGAAGGTGAAGAGGAGTGTGTGTTTTAATGGTTGTAGGGTGTCACGTTTGGCGTATAGAGAGAATGCTGATGACCGGTGCTGGAGTTTGAATCTGAAAACGCCTTTGTTTCGAAGCTCTGGGAATGTTCTTAAGGGGTCAAGAGTGGTTTGGTGGTCACGGTGTCAGAGTAATGATTCGTTAGCGTATGTCAATGGGAATGGTCGGAATGTAGAATATGTAGAAGGTCATGATGAGAGCTCAAGAGTTGGGCCTATTCATGATGATGAATCAAGTGGTTCCAGAGAAGAGGATGGAGATAAGGACAAGATAGATGAATCAGAGGCACCTACTGTGGATGAATTGAGGGAGTTGCTGCAGAATGCCATGAAAGAATTGGAAGTTGCACGTTGTAATAGTACCATATTTGAAGAAAAAGCTCAGAAAATATCTGAAGCTGCGATTTCCCTGCAGGATGAAGCAGCAACTGCCTGGAATGATGTTAATTCTACCCTTGACTCTATCCAAGAGATTGTGAATGAAGAGGGGATTGCCAAAGAAGCTGTTCAGAAAGCAACAATGACTCTTTCATTAGCAGAGGCAAGGCTTCAGGTGGGAGTAGAATCTTTGGAGGTTGCAAAAAAAGGGACTAGTTCGCTGGATGCTTCACGAGAAAGTGACGGGGAACTTGATTCTGAAGACGATGAAAAAGCACTATTGGTTGTGCAAGAAGAAATTCGGGAATGCAAGGCGAATTTGGCCAGCTGTGAGTCAGAACTTAGGCGCTTACAGAGTAAAAAAGAAGAGTTGCAGAAGGAAGTGGACAGGTTGAATGTGGTTGCAGAGAAAGCACAGCTGAATGCTTTGAAAGCAGAGGAGGATGTAACAAATATAATGCTATTAGCAGAGCAAGCTGTTGCATTTGAACTTGAGGCTGCACAACGTGTGAATGATGCAGAGATTGCATTACAAAGAGCAGAGAAATCTCTCTCGAATTCATTTGTTGATACCACACAAAACAACGAGGGACAGGTGTCTAATGATGATGCTGCTATCGAGGAGGAGGAGATGGAAGGAAGTTCTGCTAAAATATTTACTGAAAAGGCTAAAGATCTGCTAATTGATGGGGATTTGTCTGCTATGAAGCCTTTACCAGAGAGCCCTTCAGACAGAATGACTCAAAGTGTTGAAGAAACAACCGAAACTGCTGATTTAAGTGATCACGAGAACCGAAAGATAGGCAAAGATTCTCTTAAAGAGGTTGAAGTAGAGACCGAAAAGTCAAAGAATGTGGTTCAGACTAAAAAGCAGGAATCTCAGAAGGAAATAATTAGGGAAAGTGCACCATCAAATACTCCCAAGACACTAGTGAAGAAATCTTCTCGTTTCTTTCCTGCATCTTTCTTCTCTTTTCCTGAAGATGGGACTGAATTCACACCAACATCAGTGTTCCAGGGTCTGTTTGATTATGCAAGGAAGCAATGGCCCAAGTTGGTTGTTGGAATTTTCCTATGTGGCATAGGGCTTACCTTTTACACTAATCGGGCAGAAAGAGCCACTCAACTGATACAACAGCCAGATGCCATTACCACTAGTTTTGAAGAAGTTTCCTCAACTGCGAGGCCTCTAGTTCAACAATTACGCAAACTTCCTAAGAGAATTAAAAGCCTAATTGATATGCTGCCTCATCAAGAGGTGAATGAGGAGGAAGCTTCCCTCTTTGACATGCTATGGTTATTGCTTGCAAGTGTGATATTTGTGCCTGTATTCCAGAAAATTCCTGGAGGTAGTCCAGTTCTTGGGTACTTGACAGCTGGTATCTTAATTGGGCCTTATGGCCTCTCAATTATTACTCATGTACATGGAACAAAGGCAATTGCTGAATTTGGAGTTGTTTTCTTACTGTTCAACATTGGCCTTGAGCTTTCTGTTGAAAGGTTGAGTTCCATGAAGAAATATGTATTTGGATTAGGCTCTGCTCAGGTTTTGGTTACAGCTGTTGTCATTGGCTTGGTTGCTCATTATGTTTGTGGGCTGCCTGGCCCTGCTGCAATTGTAATTGGCAATGGTCTAGCTTTATCATCCACTGCAGTTGTGCTGCAGGTTTTGCAAGAGCGGGGTGAGAGCACTTCACGCCATGGTCGTGGAACCTTTTCTGTTCTACTTTTCCAGGATTTGGCTGTTGTGGTTTTGCTAATACTTATACCTCTTATTTCACCCAATTCATCCAAAGGAGGGATTGGTTTCCAAGCTATTGCTGAAGCTCTTGGACTTGCTGCTGTAAAGGCAGCAGTTGCTATCACAGCCATTATTGCTGGTGGACGCTTGTTGCTTCGACCAATTTATAGGCAAATTGCAGATAATCAAAACGCAGAAATATTTTCTGCTAACACATTGCTTGTTATTCTAGGAACAAGTCTTCTCACTGCCAGGGCTGGACTGTCCATGGCACTGGGAGCATTTTTGGCTGGTTTGCTTCTTGCGGAAACTGAATTTTCCTTACAGGTTGAGTCAGACATTGCTCCATATCGCGGCCTTCTGTTGGGTCTCTTTTTCATGACGGTTGGAATGTCTATTGATCCAAAACTTCTTGTTTCAAACTTCCCCGTTGTAGTTGGATCATTAGGACTCCTACTCGTTGGTAAATCCCTGTTGGTTGCTTTAATTGGCAAACTATCTGGCATTTCAATAATATCAGCAATAAGAGTTGGTCTTCTTCTTGCCCCTGGTGGAGAATTTGCATTTGTTGCTTTTGGTGAAGCTGTTAATCAGGGAATAATGTCTCCTCAACTATCTTCCTTGCTCTTTCTTGTCGTTGGAATTTCAATGGCACTCACACCATGGCTAGCTGCTGGGGGACAGTTAATTGCATCTCGTTTTGAGCTGCATGATGTTCGAAGCCTACTACCTGATGAGAGCGAGACAGATGATTTACAAGATCATATAATCATCTGCGGATTTGGACGAGTTGGCCAGATAATTGCACAGCTTCTTTCAGAGCGCCTAATTCCATTTGTAGCTCTTGATGTGAGGAGTGATAGAGTGACAGTTGGACGTTCCCTGGACATTCCTGTCTATTTTGGAGATGCTGGTAGTCGAGAGGTTCTCCACAAAGTTGGTGCTCACAGAGCATGTGCTGCAGCAATAACTTTAGATTCCCCTGGTGCAAACTATAGAACTGTTTGGGCTCTGAGCAAGTATTTCCCCAACGTGAAAACTTTTGTCCGTGCTCACGATGTTGACCATGGTCTTAATTTGGAGAAGGCTGGGGCCACAGCGGTTGTCCCAGAGACCTTGGAACCAAGTCTACAGTTGGCCGCTGCTGTTCTTGCTCAGGCTAAACTACCCATGTCAGAGATTGCATCAGCCATCAATGAGTATAGGTCCCGGCATCTTGCTGAGCTAACTGAGATTTGA

Protein Analysis

1188

Amino Acids

128.41

Weight (kDa)

5.11

Isoelectric Point (pI)

41.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Na_H_Exchanger PF00999 632 - 813 5.2e-27 Sodium/hydrogen exchanger, transmembrane
Na_H_Exchanger PF00999 814 - 964 2.1e-21 Sodium/hydrogen exchanger, transmembrane
TrkA_N PF02254 996 - 1109 2.8e-20 TrkA-N domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 1426, 3218
Acc36I ACCTGC 1 cut(s) 2239
AccB1I GGYRCC 1 cut(s) 493
AccB7I CCANNNNNTGG 2 cut(s) 1946, 2323
AccBSI CCGCTC 1 cut(s) 2263
AccI GTMKAC 1 cut(s) 3454
AccII CGCG 1 cut(s) 2679
AciI CCGC 6 cut(s) 2263, 2630, 2679, 3102, 3425, 3465
AclWI GGATC 3 cut(s) 12, 2720, 2773
AcoI YGGCCR 3 cut(s) 906, 3118, 3462
AcuI CTGAAG 6 cut(s) 621, 740, 864, 1296, 1584, 2427
AdeI CACNNNGTG 1 cut(s) 1091
AfaI GTAC 3 cut(s) 568, 1952, 2007
AfiI CCNNNNNNNGG 6 cut(s) 1568, 1946, 2323, 2382, 2678, 2689
AflII CTTAAG 1 cut(s) 299
AflIII ACRYGT 1 cut(s) 1090
AgeI ACCGGT 1 cut(s) 243
AhlI ACTAGT 3 cut(s) 797, 1513, 1739
AjnI CCWGG 9 cut(s) 638, 1599, 1927, 2185, 2316, 2576, 2872, 3207, 3307
AjuI GAANNNNNNNTTGG 2 cut(s) 146, 178
Alw21I GWGCWC 5 cut(s) 410, 1492, 2276, 3271, 3379
Alw26I GTCTC 5 cut(s) 1412, 2699, 2934, 3062, 3431
Alw44I GTGCAC 1 cut(s) 1488
AlwI GGATC 3 cut(s) 12, 2720, 2773
AlwNI CAGNNNCTG 2 cut(s) 635, 1606
ApaLI GTGCAC 1 cut(s) 1488
AsiGI ACCGGT 1 cut(s) 243
Asp700I GAANNNNTTC 3 cut(s) 711, 882, 2299
AspLEI GCGC 2 cut(s) 933, 3150
AspS9I GGNCC 6 cut(s) 419, 1632, 1976, 2189, 3417, 3531
AsuC2I CCSGG 1 cut(s) 3535
AsuHPI GGTGA 5 cut(s) 187, 1855, 2279, 2355, 2915
AsuII TTCGAA 2 cut(s) 280, 3043
AsuNHI GCTAGC 1 cut(s) 2992
AvaII GGWCC 1 cut(s) 3531
BaeGI GKGCMC 1 cut(s) 1492
BalI TGGCCA 2 cut(s) 908, 3120
BanI GGYRCC 1 cut(s) 493
BanII GRGCYC 3 cut(s) 410, 1310, 3337
BauI CACGAG 2 cut(s) 816, 1370
BbsI GAAGAC 3 cut(s) 852, 2558, 2852
Bbv12I GWGCWC 5 cut(s) 410, 1492, 2276, 3271, 3379
BccI CCATC 7 cut(s) 104, 455, 1210, 1265, 1501, 1562, 3524
BcgI CGANNNNNNTGC 4 cut(s) 598, 632, 3023, 3057
BciT130I CCWGG 9 cut(s) 640, 1601, 1929, 2187, 2318, 2578, 2874, 3209, 3309
BclI TGATCA 1 cut(s) 1366
BcnI CCSGG 1 cut(s) 3535
BcoDI GTCTC 5 cut(s) 1412, 2699, 2934, 3062, 3431
BcuI ACTAGT 3 cut(s) 797, 1513, 1739
BfaI CTAG 7 cut(s) 798, 1514, 1740, 1775, 2219, 2555, 2993
BfmI CTRYAG 7 cut(s) 524, 617, 2235, 2246, 3285, 3319, 3455
BfoI RGCGCY 2 cut(s) 934, 3151
BfrI CTTAAG 1 cut(s) 299
BfuAI ACCTGC 1 cut(s) 2239
BglII AGATCT 1 cut(s) 1258
BlpI GCTNAGC 1 cut(s) 3546
Bme18I GGWCC 1 cut(s) 3531
BmgT120I GGNCC 6 cut(s) 419, 1632, 1976, 2189, 3417, 3531
BmiI GGNNCC 6 cut(s) 448, 495, 2296, 3418, 3447, 3533
BmrI ACTGGG 1 cut(s) 2609
BmsI GCATC 9 cut(s) 799, 1090, 1183, 1553, 1717, 3026, 3223, 3518, 3547
BmtI GCTAGC 1 cut(s) 2996
BmuI ACTGGG 1 cut(s) 2609
BoxI GACNNNNGTC 2 cut(s) 1180, 3393
BpiI GAAGAC 3 cut(s) 852, 2558, 2852
BplI GAGNNNNNCTC 2 cut(s) 3237, 3269
BpmI CTGGAG 2 cut(s) 271, 1950
Bpu10I CCTNAGC 2 cut(s) 2127, 3480
Bpu1102I GCTNAGC 1 cut(s) 3546
Bpu14I TTCGAA 2 cut(s) 280, 3043
BpuEI CTTGAG 3 cut(s) 394, 1097, 2087
BpuMI CCSGG 1 cut(s) 3535
BsaI GGTCTC 3 cut(s) 1412, 2699, 3431
BsaWI WCCGGW 1 cut(s) 243
BsaXI ACNNNNNCTCC 2 cut(s) 175, 205
Bsc4I CCNNNNNNNGG 6 cut(s) 1568, 1946, 2323, 2382, 2678, 2689
Bse118I RCCGGY 1 cut(s) 243
Bse1I ACTGG 2 cut(s) 1940, 2604
Bse3DI GCAATG 4 cut(s) 1634, 2218, 2540, 2664
BseBI CCWGG 9 cut(s) 640, 1601, 1929, 2187, 2318, 2578, 2874, 3209, 3309
BseGI GGATG 7 cut(s) 466, 511, 628, 814, 1033, 2228, 2372
BseLI CCNNNNNNNGG 6 cut(s) 1568, 1946, 2323, 2382, 2678, 2689
BseMI GCAATG 4 cut(s) 1634, 2218, 2540, 2664
BseMII CTCAG 7 cut(s) 602, 1478, 2141, 3329, 3494, 3537, 3546
BseNI ACTGG 2 cut(s) 1940, 2604
BseRI GAGGAG 8 cut(s) 196, 1037, 1220, 1223, 1226, 1865, 2922, 3193
BseSI GKGCMC 1 cut(s) 1492
BseYI CCCAGC 2 cut(s) 2999, 3413
BsgI GTGCAG 1 cut(s) 1068
Bsh1236I CGCG 1 cut(s) 2679
BshNI GGYRCC 1 cut(s) 493
BshTI ACCGGT 1 cut(s) 243
BsiHKAI GWGCWC 5 cut(s) 410, 1492, 2276, 3271, 3379
BsiSI CCGG 2 cut(s) 244, 3535
BslFI GGGAC 6 cut(s) 808, 1188, 1585, 3018, 3416, 3517
BslI CCNNNNNNNGG 6 cut(s) 1568, 1946, 2323, 2382, 2678, 2689
BsmAI GTCTC 5 cut(s) 1412, 2699, 2934, 3062, 3431
BsmFI GGGAC 6 cut(s) 808, 1188, 1585, 3018, 3416, 3517
BsmI GAATGC 4 cut(s) 238, 535, 896, 1012
Bso31I GGTCTC 3 cut(s) 1412, 2699, 3431
Bsp119I TTCGAA 2 cut(s) 280, 3043
Bsp1286I GDGCHC 7 cut(s) 410, 1310, 1492, 2276, 3271, 3337, 3379
Bsp1407I TGTACA 1 cut(s) 2005
Bsp143I GATC 6 cut(s) 4, 1258, 1366, 2725, 2765, 3085
Bsp1720I GCTNAGC 1 cut(s) 3546
Bsp19I CCATGG 4 cut(s) 2284, 2592, 2987, 3391
BspACI CCGC 6 cut(s) 2263, 2630, 2679, 3102, 3425, 3465
BspCNI CTCAG 7 cut(s) 601, 1477, 2140, 3330, 3493, 3538, 3547
BspFNI CGCG 1 cut(s) 2679
BspHI TCATGA 3 cut(s) 397, 427, 2703
BspLI GGNNCC 6 cut(s) 448, 495, 2296, 3418, 3447, 3533
BspMAI CTGCAG 5 cut(s) 528, 621, 2239, 2250, 3289
BspMI ACCTGC 1 cut(s) 2239
BspOI GCTAGC 1 cut(s) 2996
BspPI GGATC 3 cut(s) 12, 2720, 2773
BspT104I TTCGAA 2 cut(s) 280, 3043
BspT107I GGYRCC 1 cut(s) 493
BspTI CTTAAG 1 cut(s) 299
BspTNI GGTCTC 3 cut(s) 1412, 2699, 3431
BsrBI CCGCTC 1 cut(s) 2263
BsrDI GCAATG 4 cut(s) 1634, 2218, 2540, 2664
BsrFI RCCGGY 1 cut(s) 243
BsrGI TGTACA 1 cut(s) 2005
BsrI ACTGG 2 cut(s) 1940, 2604
BssAI RCCGGY 1 cut(s) 243
BssMI GATC 6 cut(s) 4, 1258, 1366, 2725, 2765, 3085
BssSI CACGAG 2 cut(s) 816, 1370
BssT1I CCWWGG 5 cut(s) 2284, 2592, 2987, 3391, 3441
Bst2BI CACGAG 2 cut(s) 816, 1370
Bst2UI CCWGG 9 cut(s) 640, 1601, 1929, 2187, 2318, 2578, 2874, 3209, 3309
Bst4CI ACNGT 9 cut(s) 330, 502, 2052, 2589, 2710, 3009, 3196, 3328, 3459
Bst6I CTCTTC 4 cut(s) 173, 450, 684, 945
BstAFI CTTAAG 1 cut(s) 299
BstAPI GCANNNNNTGC 6 cut(s) 635, 1109, 2254, 2441, 2894, 3284
BstAUI TGTACA 1 cut(s) 2005
BstBI TTCGAA 2 cut(s) 280, 3043
BstC8I GCNNGC 5 cut(s) 26, 910, 1059, 1890, 2994
BstDEI CTNAG 9 cut(s) 588, 926, 1464, 1800, 2127, 3338, 3480, 3546, 3555
BstDSI CCRYGG 4 cut(s) 2284, 2592, 2987, 3391
BstF5I GGATG 7 cut(s) 466, 511, 628, 814, 1033, 2228, 2372
BstFNI CGCG 1 cut(s) 2679
BstH2I RGCGCY 2 cut(s) 934, 3151
BstHHI GCGC 2 cut(s) 933, 3150
BstKTI GATC 6 cut(s) 7, 1261, 1369, 2728, 2768, 3088
BstMAI GTCTC 5 cut(s) 1412, 2699, 2934, 3062, 3431
BstMBI GATC 6 cut(s) 4, 1258, 1366, 2725, 2765, 3085
BstNI CCWGG 9 cut(s) 640, 1601, 1929, 2187, 2318, 2578, 2874, 3209, 3309
BstNSI RCATGY 2 cut(s) 1876, 3282
BstPAI GACNNNNGTC 2 cut(s) 1180, 3393
BstSFI CTRYAG 7 cut(s) 524, 617, 2235, 2246, 3285, 3319, 3455
BstSLI GKGCMC 1 cut(s) 1492
BstUI CGCG 1 cut(s) 2679
BstV2I GAAGAC 3 cut(s) 852, 2558, 2852
BstX2I RGATCY 2 cut(s) 4, 1258
BstXI CCANNNNNNTGG 3 cut(s) 2291, 2599, 3263
BstYI RGATCY 2 cut(s) 4, 1258
BtgI CCRYGG 4 cut(s) 2284, 2592, 2987, 3391
BtsCI GGATG 7 cut(s) 466, 511, 628, 814, 1033, 2228, 2372
BtsI GCAGTG 2 cut(s) 2232, 2571
BtsIMutI CAGTG 4 cut(s) 1599, 2232, 2571, 2597
BveI ACCTGC 1 cut(s) 2239
Cac8I GCNNGC 5 cut(s) 26, 910, 1059, 1890, 2994
CaiI CAGNNNCTG 2 cut(s) 635, 1606
CciI TCATGA 3 cut(s) 397, 427, 2703
CfoI GCGC 2 cut(s) 933, 3150
Cfr10I RCCGGY 1 cut(s) 243
Cfr13I GGNCC 6 cut(s) 419, 1632, 1976, 2189, 3417, 3531
CseI GACGC 1 cut(s) 2478
Csp6I GTAC 3 cut(s) 567, 1951, 2006
CspAI ACCGGT 1 cut(s) 243
CspCI CAANNNNNGTGG 8 cut(s) 1419, 1454, 1726, 1761, 2221, 2256, 3409, 3444
CviQI GTAC 3 cut(s) 567, 1951, 2006
DdeI CTNAG 9 cut(s) 588, 926, 1464, 1800, 2127, 3338, 3480, 3546, 3555
DpnI GATC 6 cut(s) 6, 1260, 1368, 2727, 2767, 3087
DpnII GATC 6 cut(s) 4, 1258, 1366, 2725, 2765, 3085
DraIII CACNNNGTG 1 cut(s) 1091
DrdI GACNNNNNNGTC 2 cut(s) 1426, 3218
DseDI GACNNNNNNGTC 2 cut(s) 1426, 3218
EaeI YGGCCR 3 cut(s) 906, 3118, 3462
Eam1104I CTCTTC 4 cut(s) 173, 450, 684, 945
EarI CTCTTC 4 cut(s) 173, 450, 684, 945
Ecl136II GAGCTC 1 cut(s) 408
Eco130I CCWWGG 5 cut(s) 2284, 2592, 2987, 3391, 3441
Eco147I AGGCCT 1 cut(s) 1771
Eco24I GRGCYC 3 cut(s) 410, 1310, 3337
Eco31I GGTCTC 3 cut(s) 1412, 2699, 3431
Eco47I GGWCC 1 cut(s) 3531
Eco53kI GAGCTC 1 cut(s) 408
Eco57I CTGAAG 6 cut(s) 621, 740, 864, 1296, 1584, 2427
EcoICRI GAGCTC 1 cut(s) 408
EcoO109I RGGNCCY 1 cut(s) 3531
EcoRI GAATTC 3 cut(s) 136, 1141, 1577
EcoRII CCWGG 9 cut(s) 638, 1599, 1927, 2185, 2316, 2576, 2872, 3207, 3307
EcoT14I CCWWGG 5 cut(s) 2284, 2592, 2987, 3391, 3441
EcoT38I GRGCYC 3 cut(s) 410, 1310, 3337
ErhI CCWWGG 5 cut(s) 2284, 2592, 2987, 3391, 3441
FalI AAGNNNNNCTT 2 cut(s) 1383, 1415
FaqI GGGAC 6 cut(s) 808, 1188, 1585, 3018, 3416, 3517
FauI CCCGC 1 cut(s) 2256
FbaI TGATCA 1 cut(s) 1366
FblI GTMKAC 1 cut(s) 3454
FokI GGATG 7 cut(s) 473, 518, 635, 821, 1040, 2215, 2359
FriOI GRGCYC 3 cut(s) 410, 1310, 3337
FspBI CTAG 7 cut(s) 798, 1514, 1740, 1775, 2219, 2555, 2993
GlaI GCGC 2 cut(s) 932, 3149
GsaI CCCAGC 2 cut(s) 3003, 3417
GsuI CTGGAG 2 cut(s) 271, 1950
HaeII RGCGCY 2 cut(s) 934, 3151
HapII CCGG 2 cut(s) 244, 3535
HgaI GACGC 1 cut(s) 2478
HhaI GCGC 2 cut(s) 933, 3150
Hin6I GCGC 2 cut(s) 931, 3148
HinP1I GCGC 2 cut(s) 931, 3148
HincII GTYRAC 1 cut(s) 3388
HindII GTYRAC 1 cut(s) 3388
HindIII AAGCTT 1 cut(s) 1857
HpaII CCGG 2 cut(s) 244, 3535
HphI GGTGA 5 cut(s) 187, 1855, 2279, 2355, 2915
Hpy166II GTNNAC 5 cut(s) 970, 1490, 2468, 3388, 3455
Hpy8I GTNNAC 5 cut(s) 970, 1490, 2468, 3388, 3455
HpyCH4III ACNGT 9 cut(s) 330, 502, 2052, 2589, 2710, 3009, 3196, 3328, 3459
HpyCH4IV ACGT 5 cut(s) 214, 556, 1090, 3202, 3357
HpyF3I CTNAG 9 cut(s) 588, 926, 1464, 1800, 2127, 3338, 3480, 3546, 3555
HpySE526I ACGT 5 cut(s) 214, 556, 1090, 3202, 3357
HspAI GCGC 2 cut(s) 931, 3148
Ksp22I TGATCA 1 cut(s) 1366
Kzo9I GATC 6 cut(s) 4, 1258, 1366, 2725, 2765, 3085
LmnI GCTCC 2 cut(s) 2603, 2674
LweI GCATC 9 cut(s) 799, 1090, 1183, 1553, 1717, 3026, 3223, 3518, 3547
MaeI CTAG 7 cut(s) 798, 1514, 1740, 1775, 2219, 2555, 2993
MaeII ACGT 5 cut(s) 214, 556, 1090, 3202, 3357
MaeIII GTNAC 6 cut(s) 210, 324, 824, 1030, 2137, 3190
MalI GATC 6 cut(s) 6, 1260, 1368, 2727, 2767, 3087
MbiI CCGCTC 1 cut(s) 2263
MboI GATC 6 cut(s) 4, 1258, 1366, 2725, 2765, 3085
MfeI CAATTG 2 cut(s) 2022, 2199
MflI RGATCY 2 cut(s) 4, 1258
MhlI GDGCHC 7 cut(s) 410, 1310, 1492, 2276, 3271, 3337, 3379
MlsI TGGCCA 2 cut(s) 908, 3120
MluNI TGGCCA 2 cut(s) 908, 3120
MlyI GAGTC 6 cut(s) 659, 724, 926, 1318, 2666, 2769
MmeI TCCRAC 6 cut(s) 353, 1627, 2692, 2743, 2944, 3178
Mox20I TGGCCA 2 cut(s) 908, 3120
MroXI GAANNNNTTC 3 cut(s) 711, 882, 2299
MscI TGGCCA 2 cut(s) 908, 3120
MslI CAYNNNNRTG 3 cut(s) 432, 2007, 2289
Msp20I TGGCCA 2 cut(s) 908, 3120
MspA1I CMGCKG 6 cut(s) 912, 1003, 1961, 2144, 3425, 3467
MspCI CTTAAG 1 cut(s) 299
MspI CCGG 2 cut(s) 244, 3535
MunI CAATTG 2 cut(s) 2022, 2199
Mva1269I GAATGC 4 cut(s) 238, 535, 896, 1012
MvaI CCWGG 9 cut(s) 640, 1601, 1929, 2187, 2318, 2578, 2874, 3209, 3309
MvnI CGCG 1 cut(s) 2679
NciI CCSGG 1 cut(s) 3535
NcoI CCATGG 4 cut(s) 2284, 2592, 2987, 3391
NdeII GATC 6 cut(s) 4, 1258, 1366, 2725, 2765, 3085
NheI GCTAGC 1 cut(s) 2992
NlaIV GGNNCC 6 cut(s) 448, 495, 2296, 3418, 3447, 3533
NmuCI GTSAC 4 cut(s) 210, 324, 824, 3190
NspI RCATGY 2 cut(s) 1876, 3282
NspV TTCGAA 2 cut(s) 280, 3043
PagI TCATGA 3 cut(s) 397, 427, 2703
PceI AGGCCT 1 cut(s) 1771
PcsI WCGNNNNNNNCGW 1 cut(s) 2287
PctI GAATGC 4 cut(s) 238, 535, 896, 1012
PdmI GAANNNNTTC 3 cut(s) 711, 882, 2299
PflMI CCANNNNNTGG 2 cut(s) 1946, 2323
PfoI TCCNGGA 2 cut(s) 1927, 2316
PinAI ACCGGT 1 cut(s) 243
PleI GAGTC 6 cut(s) 659, 724, 925, 1318, 2665, 2769
PpsI GAGTC 6 cut(s) 659, 724, 925, 1318, 2665, 2769
PpuMI RGGWCCY 1 cut(s) 3531
PshAI GACNNNNGTC 2 cut(s) 1180, 3393
Psp124BI GAGCTC 1 cut(s) 410
Psp5II RGGWCCY 1 cut(s) 3531
Psp6I CCWGG 9 cut(s) 638, 1599, 1927, 2185, 2316, 2576, 2872, 3207, 3307
PspFI CCCAGC 2 cut(s) 2999, 3413
PspGI CCWGG 9 cut(s) 638, 1599, 1927, 2185, 2316, 2576, 2872, 3207, 3307
PspN4I GGNNCC 6 cut(s) 448, 495, 2296, 3418, 3447, 3533
PspPI GGNCC 6 cut(s) 419, 1632, 1976, 2189, 3417, 3531
PspPPI RGGWCCY 1 cut(s) 3531
PsrI GAACNNNNNNTAC 2 cut(s) 3438, 3470
PstI CTGCAG 5 cut(s) 528, 621, 2239, 2250, 3289
PstNI CAGNNNCTG 2 cut(s) 635, 1606
PsuI RGATCY 2 cut(s) 4, 1258
PvuII CAGCTG 4 cut(s) 912, 1003, 1961, 2144
RsaI GTAC 3 cut(s) 568, 1952, 2007
RsaNI GTAC 3 cut(s) 567, 1951, 2006
RseI CAYNNNNRTG 3 cut(s) 432, 2007, 2289
SacI GAGCTC 1 cut(s) 410
Sau3AI GATC 6 cut(s) 4, 1258, 1366, 2725, 2765, 3085
Sau96I GGNCC 6 cut(s) 419, 1632, 1976, 2189, 3417, 3531
SbfI CCTGCAGG 1 cut(s) 621
SchI GAGTC 6 cut(s) 659, 724, 926, 1318, 2666, 2769
SdaI CCTGCAGG 1 cut(s) 621
SduI GDGCHC 7 cut(s) 410, 1310, 1492, 2276, 3271, 3337, 3379
SfaNI GCATC 9 cut(s) 799, 1090, 1183, 1553, 1717, 3026, 3223, 3518, 3547
SfcI CTRYAG 7 cut(s) 524, 617, 2235, 2246, 3285, 3319, 3455
SfuI TTCGAA 2 cut(s) 280, 3043
SinI GGWCC 1 cut(s) 3531
SmiMI CAYNNNNRTG 3 cut(s) 432, 2007, 2289
SmlI CTYRAG 4 cut(s) 299, 409, 1076, 2066
SmoI CTYRAG 4 cut(s) 299, 409, 1076, 2066
SpeI ACTAGT 3 cut(s) 797, 1513, 1739
Sse8387I CCTGCAGG 1 cut(s) 621
SseBI AGGCCT 1 cut(s) 1771
SsiI CCGC 6 cut(s) 2263, 2630, 2679, 3102, 3425, 3465
SspI AATATT 2 cut(s) 1239, 2526
SspMI CTAG 7 cut(s) 798, 1514, 1740, 1775, 2219, 2555, 2993
SstI GAGCTC 1 cut(s) 410
StuI AGGCCT 1 cut(s) 1771
StyI CCWWGG 5 cut(s) 2284, 2592, 2987, 3391, 3441
TaaI ACNGT 9 cut(s) 330, 502, 2052, 2589, 2710, 3009, 3196, 3328, 3459
TaiI ACGT 5 cut(s) 217, 559, 1093, 3205, 3360
TaqI TCGA 7 cut(s) 140, 280, 1139, 1203, 2482, 3043, 3244
TaqII GACCGA 1 cut(s) 1436
TatI WGTACW 1 cut(s) 2005
TauI GCSGC 2 cut(s) 2682, 3467
TscAI CASTG 4 cut(s) 1599, 2239, 2578, 2604
TseFI GTSAC 4 cut(s) 210, 324, 824, 3190
Tsp45I GTSAC 4 cut(s) 210, 324, 824, 3190
TspGWI ACGGA 1 cut(s) 3362
TspRI CASTG 4 cut(s) 1599, 2239, 2578, 2604
Van91I CCANNNNNTGG 2 cut(s) 1946, 2323
Vha464I CTTAAG 1 cut(s) 299
VneI GTGCAC 1 cut(s) 1488
VpaK11BI GGWCC 1 cut(s) 3531
XceI RCATGY 2 cut(s) 1876, 3282
XcmI CCANNNNNNNNNTGG 2 cut(s) 541, 1925
XmiI GTMKAC 1 cut(s) 3454
XmnI GAANNNNTTC 3 cut(s) 711, 882, 2299
XspI CTAG 7 cut(s) 798, 1514, 1740, 1775, 2219, 2555, 2993
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.