AT4G00710

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Forward (+)
289779 .. 293492
3714 bp
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UTR
Exon/CDS
Intron
AT4G00710.2

Sequence Viewer

Length: 1470 bp
ATGGGAGGTCAATGCTCTAGCCTGAGTTGTTGCAGGAACACTTCACACAAGACAGCTGTTCTTGAAGCTCCTGATGTTGATAATGGAGAGAGTAGTGAGATCACTGATGTTCCTAATTTCCGGGAGTATACTTTAGAACAGCTTAAGGCAGCTACTTCTGGTTTTGCCGTGGAGTATATTGTATCTGAACATGGAGAAAAGGCTCCAAATGTTGTCTATAAAGGGAAATTGGAGAACCAAAAGAAGATTGCTGTCAAGCGTTTTACTAGAATGGCCTGGCCTGATTCACGACAGTTCTTGGAGGAAGCGAGGTCGGTTGGTCAGCTACGGAGTGAGAGAATGGCCAATTTACTCGGATGTTGCTGCGAAGGTGACGAGAGGTTACTTGTAGCAGAGTTTATGCCTAATGAAACACTAGCCAAACACCTTTTTCACTGGGAAACTCAACCTATGAAATGGACTATGAGGCTACGAGTTGTTTTATATCTAGCACAAGCTCTTGAATACTGCACCAGCAAAGGCCGTACTCTTTACCACGACCTCAATGCTTACCGGGTTTTGTTTGATGAGGAATGCAATCCAAGACTATCTACTTTTGGCTTGATGAAGAATAGTCGGGATGGAAAAAGTTACAGCACTAATCTTGCTTTCACCCCTCCTGAATATCTACGAACTGGGAGAATTACTCCAGAGAGTGTAATATACAGCTTTGGCACTCTTCTGCTTGATCTTCTCAGCGGAAAACATATACCTCCTAGCCATGCCCTTGATCTGATTAGAGACAGAAATCTCCAGACGCTAACTGATTCTTGCCTAGATGGGCAGTTTTCTGATAGTGATGGTACAGAGCTAGTACGCCTAGCTTCTCGTTGTCTTCAGTATGAAGCTCGTGAGCGGCCAAACACCAAATCTTTAGTGACTGCCTTGACACCTCTTCAGAAGGAGACAGAGGTCCTGTCTCATGTTCTAATGGGTCTACCTCACAGTGGTTCAGTCTCTCCTCTGTCCCCTCTTGGTGAGGCTTGTTCAAGAAGGGACCTGACCGCTATGCTTGAGATCCTGGAGAAACTTGGATACAAAGACGACGAGGGTGTCACCAATGAGCTCTCGTTTCATATGTGGACAGACCAGATGCAAGAGTCTTTGAACTCGAAGAAGAAGGGTGATGTGGCTTTCAGGCAAAAAGACTTTAGAGAGGCCATCGAGTGTTACACACAGTTTATTGATGGAGGAATGATCTCTCCAACAGTGTGTGCTCGGCGTAGTCTGTGTTACCTAATGAGTGACATGCCGAAAGAAGCTTTAGATGATGCAATTCAGGCTCAAGTGATCTCTCCCGTGTGGCATGTCGCATCATATCTGCAGTCTGCTTCCCTTGGTATCCTGGGAATGGAGAAGGAATCTCAAATCGCACTGAAAGAGGGCTCGAACCTTGAAGCAAAGATGAATGGAGTTCCCCGAGTGAAGTAA

Protein Analysis

489

Amino Acids

54.91

Weight (kDa)

5.87

Isoelectric Point (pI)

43.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 71 - 309 4.2e-26 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 71 - 306 3.4e-21 Protein kinase domain
TPR_BSK1_C PF25575 340 - 456 6.3e-59 Serine/threonine-protein kinase BSK1-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1091
AccBSI CCGCTC 1 cut(s) 895
AccI GTMKAC 2 cut(s) 128, 976
AciI CCGC 3 cut(s) 738, 895, 1044
AclWI GGATC 1 cut(s) 1051
AcoI YGGCCR 2 cut(s) 342, 896
AcuI CTGAAG 2 cut(s) 860, 920
AfaI GTAC 3 cut(s) 526, 844, 855
AfiI CCNNNNNNNGG 2 cut(s) 986, 1390
AflII CTTAAG 1 cut(s) 143
AgsI TTSAA 5 cut(s) 65, 503, 1029, 1147, 1436
AjnI CCWGG 3 cut(s) 275, 1059, 1383
Alw21I GWGCWC 2 cut(s) 1107, 1258
Alw26I GTCTC 4 cut(s) 774, 938, 963, 1000
AlwI GGATC 1 cut(s) 1051
Ama87I CYCGRG 1 cut(s) 1458
AoxI GGCC 6 cut(s) 273, 278, 342, 520, 896, 1197
ApeKI GCWGC 2 cut(s) 149, 363
AspS9I GGNCC 2 cut(s) 952, 1036
AsuC2I CCSGG 2 cut(s) 122, 554
AsuHPI GGTGA 5 cut(s) 383, 643, 1028, 1087, 1175
AvaI CYCGRG 1 cut(s) 1458
AvaII GGWCC 2 cut(s) 952, 1036
BalI TGGCCA 1 cut(s) 344
BanII GRGCYC 2 cut(s) 1107, 1427
BauI CACGAG 1 cut(s) 888
BbsI GAAGAC 1 cut(s) 866
Bbv12I GWGCWC 2 cut(s) 1107, 1258
BbvI GCAGC 2 cut(s) 161, 350
BccI CCATC 5 cut(s) 614, 812, 833, 1208, 1220
BceAI ACGGC 2 cut(s) 152, 507
BcgI CGANNNNNNTGC 2 cut(s) 527, 561
BciT130I CCWGG 3 cut(s) 277, 1061, 1385
BciVI GTATCC 2 cut(s) 1067, 1391
BcnI CCSGG 2 cut(s) 122, 554
BcoDI GTCTC 4 cut(s) 774, 938, 963, 1000
BfaI CTAG 8 cut(s) 18, 267, 416, 488, 756, 815, 851, 860
BfmI CTRYAG 1 cut(s) 1361
BfrI CTTAAG 1 cut(s) 143
BfuI GTATCC 2 cut(s) 1067, 1391
BisI GCNGC 3 cut(s) 150, 364, 896
BlsI GCNGC 3 cut(s) 151, 365, 897
Bme1390I CCNGG 5 cut(s) 122, 277, 554, 1061, 1385
Bme18I GGWCC 2 cut(s) 952, 1036
BmeT110I CYCGRG 1 cut(s) 1458
BmgT120I GGNCC 2 cut(s) 952, 1036
BmiI GGNNCC 2 cut(s) 204, 1037
BmrFI CCNGG 5 cut(s) 122, 277, 554, 1061, 1385
BmrI ACTGGG 2 cut(s) 445, 684
BmsI GCATC 3 cut(s) 1122, 1300, 1361
BmuI ACTGGG 2 cut(s) 445, 684
BoxI GACNNNNGTC 1 cut(s) 950
BpiI GAAGAC 1 cut(s) 866
BplI GAGNNNNNCTC 2 cut(s) 670, 702
BpmI CTGGAG 3 cut(s) 672, 776, 1082
BpuEI CTTGAG 2 cut(s) 1073, 1308
BpuMI CCSGG 2 cut(s) 122, 554
BsaJI CCNNGG 3 cut(s) 168, 1375, 1384
Bsc4I CCNNNNNNNGG 2 cut(s) 986, 1390
Bse1I ACTGG 2 cut(s) 440, 679
BseBI CCWGG 3 cut(s) 277, 1061, 1385
BseDI CCNNGG 3 cut(s) 168, 1375, 1384
BseGI GGATG 2 cut(s) 362, 625
BseLI CCNNNNNNNGG 2 cut(s) 986, 1390
BseMII CTCAG 2 cut(s) 14, 748
BseNI ACTGG 2 cut(s) 440, 679
BseRI GAGGAG 1 cut(s) 990
BseXI GCAGC 2 cut(s) 161, 350
BsgI GTGCAG 1 cut(s) 493
BshFI GGCC 6 cut(s) 275, 280, 344, 522, 898, 1199
BsiHKAI GWGCWC 2 cut(s) 1107, 1258
BsiHKCI CYCGRG 1 cut(s) 1458
BsiSI CCGG 2 cut(s) 121, 553
BslFI GGGAC 2 cut(s) 991, 1049
BslI CCNNNNNNNGG 2 cut(s) 986, 1390
BsmAI GTCTC 4 cut(s) 774, 938, 963, 1000
BsmFI GGGAC 2 cut(s) 991, 1049
BsmI GAATGC 1 cut(s) 578
BsnI GGCC 6 cut(s) 275, 280, 344, 522, 898, 1199
BsoBI CYCGRG 1 cut(s) 1458
Bsp1286I GDGCHC 3 cut(s) 1107, 1258, 1427
Bsp143I GATC 6 cut(s) 99, 727, 769, 1056, 1236, 1329
BspACI CCGC 3 cut(s) 738, 895, 1044
BspANI GGCC 6 cut(s) 275, 280, 344, 522, 898, 1199
BspCNI CTCAG 2 cut(s) 15, 747
BspLI GGNNCC 2 cut(s) 204, 1037
BspMAI CTGCAG 1 cut(s) 1365
BspPI GGATC 1 cut(s) 1051
BspTI CTTAAG 1 cut(s) 143
BsrBI CCGCTC 1 cut(s) 895
BsrI ACTGG 2 cut(s) 440, 679
BssECI CCNNGG 3 cut(s) 168, 1375, 1384
BssMI GATC 6 cut(s) 99, 727, 769, 1056, 1236, 1329
BssNAI GTATAC 1 cut(s) 129
BssSI CACGAG 1 cut(s) 888
BssT1I CCWWGG 1 cut(s) 1375
Bst1107I GTATAC 1 cut(s) 129
Bst2BI CACGAG 1 cut(s) 888
Bst2UI CCWGG 3 cut(s) 277, 1061, 1385
Bst4CI ACNGT 4 cut(s) 294, 986, 1218, 1249
Bst6I CTCTTC 2 cut(s) 723, 939
BstAFI CTTAAG 1 cut(s) 143
BstDEI CTNAG 2 cut(s) 23, 734
BstDSI CCRYGG 1 cut(s) 168
BstF5I GGATG 2 cut(s) 362, 625
BstKTI GATC 6 cut(s) 102, 730, 772, 1059, 1239, 1332
BstMAI GTCTC 4 cut(s) 774, 938, 963, 1000
BstMBI GATC 6 cut(s) 99, 727, 769, 1056, 1236, 1329
BstMWI GCNNNNNNNGC 1 cut(s) 1319
BstNI CCWGG 3 cut(s) 277, 1061, 1385
BstNSI RCATGY 2 cut(s) 1291, 1349
BstPAI GACNNNNGTC 1 cut(s) 950
BstSCI CCNGG 5 cut(s) 120, 275, 552, 1059, 1383
BstSFI CTRYAG 1 cut(s) 1361
BstV1I GCAGC 2 cut(s) 161, 350
BstV2I GAAGAC 1 cut(s) 866
BstX2I RGATCY 1 cut(s) 1056
BstYI RGATCY 1 cut(s) 1056
BstZ17I GTATAC 1 cut(s) 129
BsuI GTATCC 2 cut(s) 1067, 1391
BsuRI GGCC 6 cut(s) 275, 280, 344, 522, 898, 1199
BtgI CCRYGG 1 cut(s) 168
BtsCI GGATG 2 cut(s) 362, 625
BtsIMutI CAGTG 5 cut(s) 102, 433, 991, 1254, 1412
Cfr13I GGNCC 2 cut(s) 952, 1036
CseI GACGC 1 cut(s) 805
Csp6I GTAC 3 cut(s) 525, 843, 854
CviAII CATG 5 cut(s) 191, 761, 962, 1288, 1346
CviQI GTAC 3 cut(s) 525, 843, 854
DdeI CTNAG 2 cut(s) 23, 734
DpnI GATC 6 cut(s) 101, 729, 771, 1058, 1238, 1331
DpnII GATC 6 cut(s) 99, 727, 769, 1056, 1236, 1329
DrdI GACNNNNNNGTC 1 cut(s) 1091
DseDI GACNNNNNNGTC 1 cut(s) 1091
EaeI YGGCCR 2 cut(s) 342, 896
Eam1104I CTCTTC 2 cut(s) 723, 939
EarI CTCTTC 2 cut(s) 723, 939
Ecl136II GAGCTC 1 cut(s) 1105
Eco130I CCWWGG 1 cut(s) 1375
Eco24I GRGCYC 2 cut(s) 1107, 1427
Eco47I GGWCC 2 cut(s) 952, 1036
Eco53kI GAGCTC 1 cut(s) 1105
Eco57I CTGAAG 2 cut(s) 860, 920
Eco88I CYCGRG 1 cut(s) 1458
EcoICRI GAGCTC 1 cut(s) 1105
EcoO109I RGGNCCY 2 cut(s) 952, 1036
EcoRII CCWGG 3 cut(s) 275, 1059, 1383
EcoT14I CCWWGG 1 cut(s) 1375
EcoT38I GRGCYC 2 cut(s) 1107, 1427
ErhI CCWWGG 1 cut(s) 1375
FaeI CATG 5 cut(s) 194, 764, 965, 1291, 1349
FaqI GGGAC 2 cut(s) 991, 1049
FatI CATG 5 cut(s) 190, 760, 961, 1287, 1345
FauNDI CATATG 1 cut(s) 1116
FblI GTMKAC 2 cut(s) 128, 976
Fnu4HI GCNGC 3 cut(s) 150, 364, 896
FokI GGATG 2 cut(s) 369, 632
FriOI GRGCYC 2 cut(s) 1107, 1427
Fsp4HI GCNGC 3 cut(s) 150, 364, 896
FspBI CTAG 8 cut(s) 18, 267, 416, 488, 756, 815, 851, 860
GluI GCNGC 3 cut(s) 150, 364, 896
GsuI CTGGAG 3 cut(s) 672, 776, 1082
HaeIII GGCC 6 cut(s) 275, 280, 344, 522, 898, 1199
HapII CCGG 2 cut(s) 121, 553
HgaI GACGC 1 cut(s) 805
Hin1II CATG 5 cut(s) 194, 764, 965, 1291, 1349
HindIII AAGCTT 1 cut(s) 1299
HinfI GANTC 4 cut(s) 284, 806, 1139, 1400
HpaII CCGG 2 cut(s) 121, 553
HphI GGTGA 5 cut(s) 383, 643, 1028, 1087, 1175
Hpy166II GTNNAC 3 cut(s) 129, 977, 1122
Hpy188I TCNGA 5 cut(s) 187, 356, 774, 832, 939
Hpy8I GTNNAC 3 cut(s) 129, 977, 1122
Hpy99I CGWCG 1 cut(s) 1088
HpyAV CCTTC 5 cut(s) 362, 934, 1026, 1153, 1390
HpyCH4III ACNGT 4 cut(s) 294, 986, 1218, 1249
HpyCH4V TGCA 6 cut(s) 33, 510, 576, 1135, 1313, 1363
HpyF10VI GCNNNNNNNGC 1 cut(s) 1319
HpyF3I CTNAG 2 cut(s) 23, 734
Hsp92II CATG 5 cut(s) 194, 764, 965, 1291, 1349
Kzo9I GATC 6 cut(s) 99, 727, 769, 1056, 1236, 1329
LmnI GCTCC 2 cut(s) 73, 208
Lsp1109I GCAGC 2 cut(s) 161, 350
LweI GCATC 3 cut(s) 1122, 1300, 1361
MaeI CTAG 8 cut(s) 18, 267, 416, 488, 756, 815, 851, 860
MaeIII GTNAC 8 cut(s) 371, 381, 629, 916, 1093, 1208, 1271, 1283
MalI GATC 6 cut(s) 101, 729, 771, 1058, 1238, 1331
MbiI CCGCTC 1 cut(s) 895
MboI GATC 6 cut(s) 99, 727, 769, 1056, 1236, 1329
MboII GAAGA 8 cut(s) 256, 619, 710, 722, 866, 926, 1165, 1168
MflI RGATCY 1 cut(s) 1056
MhlI GDGCHC 3 cut(s) 1107, 1258, 1427
MlsI TGGCCA 1 cut(s) 344
MluCI AATT 5 cut(s) 115, 227, 346, 681, 1314
MluNI TGGCCA 1 cut(s) 344
MlyI GAGTC 1 cut(s) 1148
MmeI TCCRAC 1 cut(s) 1268
Mox20I TGGCCA 1 cut(s) 344
MscI TGGCCA 1 cut(s) 344
MseI TTAA 1 cut(s) 144
Msp20I TGGCCA 1 cut(s) 344
MspA1I CMGCKG 2 cut(s) 56, 738
MspCI CTTAAG 1 cut(s) 143
MspI CCGG 2 cut(s) 121, 553
MspR9I CCNGG 5 cut(s) 122, 277, 554, 1061, 1385
Mva1269I GAATGC 1 cut(s) 578
MvaI CCWGG 3 cut(s) 277, 1061, 1385
MwoI GCNNNNNNNGC 1 cut(s) 1319
NciI CCSGG 2 cut(s) 122, 554
NdeI CATATG 1 cut(s) 1116
NdeII GATC 6 cut(s) 99, 727, 769, 1056, 1236, 1329
NlaIII CATG 5 cut(s) 194, 764, 965, 1291, 1349
NlaIV GGNNCC 2 cut(s) 204, 1037
NmeAIII GCCGAG 1 cut(s) 1237
NmuCI GTSAC 4 cut(s) 371, 916, 1093, 1283
NspI RCATGY 2 cut(s) 1291, 1349
PctI GAATGC 1 cut(s) 578
PfeI GAWTC 3 cut(s) 284, 806, 1400
PfoI TCCNGGA 2 cut(s) 120, 1059
PkrI GCNGC 3 cut(s) 151, 365, 897
PleI GAGTC 1 cut(s) 1147
PpsI GAGTC 1 cut(s) 1147
PpuMI RGGWCCY 2 cut(s) 952, 1036
PshAI GACNNNNGTC 1 cut(s) 950
Psp124BI GAGCTC 1 cut(s) 1107
Psp5II RGGWCCY 2 cut(s) 952, 1036
Psp6I CCWGG 3 cut(s) 275, 1059, 1383
PspGI CCWGG 3 cut(s) 275, 1059, 1383
PspN4I GGNNCC 2 cut(s) 204, 1037
PspPI GGNCC 2 cut(s) 952, 1036
PspPPI RGGWCCY 2 cut(s) 952, 1036
PstI CTGCAG 1 cut(s) 1365
PsuI RGATCY 1 cut(s) 1056
PvuII CAGCTG 1 cut(s) 56
RsaI GTAC 3 cut(s) 526, 844, 855
RsaNI GTAC 3 cut(s) 525, 843, 854
SacI GAGCTC 1 cut(s) 1107
SaqAI TTAA 1 cut(s) 144
SatI GCNGC 3 cut(s) 150, 364, 896
Sau3AI GATC 6 cut(s) 99, 727, 769, 1056, 1236, 1329
Sau96I GGNCC 2 cut(s) 952, 1036
SchI GAGTC 1 cut(s) 1148
ScrFI CCNGG 5 cut(s) 122, 277, 554, 1061, 1385
SduI GDGCHC 3 cut(s) 1107, 1258, 1427
SfaNI GCATC 3 cut(s) 1122, 1300, 1361
SfcI CTRYAG 1 cut(s) 1361
SinI GGWCC 2 cut(s) 952, 1036
SmlI CTYRAG 3 cut(s) 143, 1052, 1323
SmoI CTYRAG 3 cut(s) 143, 1052, 1323
Sse9I AATT 5 cut(s) 115, 227, 346, 681, 1314
SsiI CCGC 3 cut(s) 738, 895, 1044
SspMI CTAG 8 cut(s) 18, 267, 416, 488, 756, 815, 851, 860
SstI GAGCTC 1 cut(s) 1107
StyD4I CCNGG 5 cut(s) 120, 275, 552, 1059, 1383
StyI CCWWGG 1 cut(s) 1375
TaaI ACNGT 4 cut(s) 294, 986, 1218, 1249
TaqI TCGA 3 cut(s) 1151, 1203, 1427
TasI AATT 5 cut(s) 115, 227, 346, 681, 1314
TauI GCSGC 1 cut(s) 898
TfiI GAWTC 3 cut(s) 284, 806, 1400
Tru1I TTAA 1 cut(s) 144
Tru9I TTAA 1 cut(s) 144
TscAI CASTG 5 cut(s) 109, 440, 991, 1254, 1419
TseFI GTSAC 4 cut(s) 371, 916, 1093, 1283
TseI GCWGC 2 cut(s) 149, 363
Tsp45I GTSAC 4 cut(s) 371, 916, 1093, 1283
TspDTI ATGAA 6 cut(s) 423, 467, 620, 897, 1103, 1460
TspGWI ACGGA 1 cut(s) 343
TspRI CASTG 5 cut(s) 109, 440, 991, 1254, 1419
Vha464I CTTAAG 1 cut(s) 143
VpaK11BI GGWCC 2 cut(s) 952, 1036
XceI RCATGY 2 cut(s) 1291, 1349
XmiI GTMKAC 2 cut(s) 128, 976
XspI CTAG 8 cut(s) 18, 267, 416, 488, 756, 815, 851, 860
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.