pycom01g08210

Serine threonine-protein kinase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr1
Physical Location & Seq
Forward (+)
9163663 .. 9173566
9904 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom01g08210.3

Sequence Viewer

Length: 1719 bp
ATGGGGGGTCAATGCTTCAAACTCATACCATGTTGCTGGAATTCACAAATGAAGGCAGTGGTTCTCGAAACTCCTGATATTGATAATGAGGAGAAGAGTGAGGTTGATAACTTACCTGCATTTCGTGAATTCACATTTGAGCAACTTAAAAATGCAACATCTGGTTTTGCCGTGGAGTACATTGTGTCTGAGCAAGGAGAGAAGGCTCCAAATATTGTTTATAAAGGGAAACTTGAAAATCAGAAGAGAATTGCTGTTAAGCGCTTCAATAGGTTGGCCTGGCCCGATGCTCAGCAATTTGTGGAGGAAGCAAGATTGGTCGGTCACCTCCGCAACCATAGATTGGTCAATTTGCTTGGTTGTTGTTGTGAAGGTGATGAAAGGTTGCTTGTGTCGGAATATATGCCCAATGAAACACTTGCAAAGCATCTTTTTCATTGGGATACACAGCCTATGAAATGGGTAATGCGATTAAGGGTTGTGTTACATCTTGCACAGGCTCTAGAATACTGCACAAGTAAGGGGCGTGCGCTTTATCACAACCTTAATGGTTACAGAATTTTATTTGATGAGGATGGCAATCCTAGAATATCCACCTTTGGACTGATGAAAAATAGTAGGGATGGGAAGAGTTATAGTACAAATCTAGCATTTACTCCTCCTGAATATATTAGGACTGGGAGAGTAACACCAGAAAGTGCAATATATAGCTTTGGGACTCTCTTGATTGATCTTCTCAGCGGAAAGCATATCCCCCCTAGCCATGCCCTAGACCTGATTCGAGACAGAAATCTTCAGATGCTGATAGATTCTTGCTTGGAAGTACAGCTTTCTAATGATGATGGTACTGAGTTGGCACGCTTGGCTTCACGATGTTTACAATCTGAACCCGGAGAGCGACCAAATCCAAAGTCATTAGTTGCTTCTTTGACTCCTCTTCAGAAAGAAACTGAGGTTCCTTCTTCTGTTTTGATGGGTATCCCACACGGTACCTCCTGGTCTTCTCTTTCACCACTCGGCGAAGCCTGCACAAGAAGGGATTTGACTGCTATACATGAGATCCTAGAGAGTATCGGCTATAAAGATGATGGAATGACAAATGAGCTCTCGTTCCAAATGTGGACTGGCCAAATGCAGGAATCATTAGATTCAAAGAAAAAGGGGGATTCTGCTTTTAAGCACAAGGACTTCAGAACCACGATTGAGTGTTATTCACAGTTCATTGATGTTGGAACGATGGTTTCTCCAACAATTTTTGCCCGGCGTAGTTTGTCTTATCTCATGAGTGACAAGCCTCAGAAAGCTCTAAACGATGCAATGCAAGCACAAGTAGTCTCCCCAGTTTGGCACATTGCGTGTTATCTTCAGGCTGTTGCCCTTTCGGCACTTGGAATGGACATTGAAACTCAAGCAGCACTTAAGGAGGGTACTACGCTTGAATCCAAAAGGAGTAAAGCTGTTGGACAAAAACAACTCAAGGAAGCTATAAACAATGCAATGCAAGCACAAGTAGTTTCCCCAGTTTGGCACTTGCATGTTATCTTCAGGCTGTTGCCCTTTCGGCCCTTGGAATGGATGGTGAAGCTCATGCAGCACTTACGGAGGGTACTATGCTTGAATCCTAAAGGAGCAAAGCAGCTGGACAGAAGTGAAAATCTAGGCCGGTCAACAAGGTGCCTAGTTTGCCACTTCTCTCGGTTTGGCTCTCAGCTTATATAG

Protein Analysis

573

Amino Acids

64.68

Weight (kDa)

8.26

Isoelectric Point (pI)

47.95

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 222
Acc36I ACCTGC 1 cut(s) 124
Acc65I GGTACC 1 cut(s) 989
AccB1I GGYRCC 2 cut(s) 989, 1674
AccB7I CCANNNNNTGG 1 cut(s) 343
AciI CCGC 2 cut(s) 331, 741
AclWI GGATC 1 cut(s) 1054
AcoI YGGCCR 1 cut(s) 1126
AcsI RAATTY 3 cut(s) 40, 128, 558
AcuI CTGAAG 5 cut(s) 779, 923, 1174, 1349, 1528
AfaI GTAC 7 cut(s) 179, 640, 825, 847, 991, 1429, 1608
AfeI AGCGCT 1 cut(s) 263
AfiI CCNNNNNNNGG 5 cut(s) 343, 1135, 1344, 1524, 1572
AflII CTTAAG 1 cut(s) 1418
AgsI TTSAA 7 cut(s) 19, 236, 268, 1152, 1403, 1439, 1618
AjnI CCWGG 2 cut(s) 278, 995
AluBI AGCT 9 cut(s) 711, 829, 1105, 1304, 1457, 1484, 1585, 1639, 1711
AluI AGCT 9 cut(s) 711, 829, 1105, 1304, 1457, 1484, 1585, 1639, 1711
Alw21I GWGCWC 1 cut(s) 1107
Alw26I GTCTC 2 cut(s) 777, 1339
AlwI GGATC 1 cut(s) 1054
AlwNI CAGNNNCTG 1 cut(s) 802
Aor51HI AGCGCT 1 cut(s) 263
AoxI GGCC 5 cut(s) 276, 281, 1126, 1562, 1660
ApeKI GCWGC 3 cut(s) 1412, 1591, 1636
ApoI RAATTY 3 cut(s) 40, 128, 558
ArsI GACNNNNNNTTYG 2 cut(s) 896, 928
Asp718I GGTACC 1 cut(s) 989
AspLEI GCGC 2 cut(s) 264, 532
AspS9I GGNCC 2 cut(s) 282, 1563
AsuC2I CCSGG 2 cut(s) 891, 1261
AsuHPI GGTGA 4 cut(s) 317, 386, 1002, 1591
BalI TGGCCA 1 cut(s) 1128
BanI GGYRCC 2 cut(s) 989, 1674
BanII GRGCYC 1 cut(s) 1107
BbsI GAAGAC 1 cut(s) 993
Bbv12I GWGCWC 1 cut(s) 1107
BbvI GCAGC 3 cut(s) 1424, 1603, 1648
BccI CCATC 7 cut(s) 569, 617, 836, 967, 1082, 1231, 1570
BceAI ACGGC 1 cut(s) 155
BciT130I CCWGG 2 cut(s) 280, 997
BciVI GTATCC 2 cut(s) 436, 989
BcnI CCSGG 2 cut(s) 891, 1261
BcoDI GTCTC 2 cut(s) 777, 1339
BfaI CTAG 8 cut(s) 503, 585, 647, 759, 770, 1064, 1658, 1679
BfoI RGCGCY 1 cut(s) 265
BfrI CTTAAG 1 cut(s) 1418
BfuAI ACCTGC 1 cut(s) 124
BfuI GTATCC 2 cut(s) 436, 989
BglI GCCNNNNNGGC 2 cut(s) 1382, 1561
BisI GCNGC 3 cut(s) 1413, 1592, 1637
BlpI GCTNAGC 1 cut(s) 291
BlsI GCNGC 3 cut(s) 1414, 1593, 1638
Bme1390I CCNGG 4 cut(s) 280, 891, 997, 1261
BmgT120I GGNCC 2 cut(s) 282, 1563
BmiI GGNNCC 4 cut(s) 207, 957, 991, 1676
BmrFI CCNGG 4 cut(s) 280, 891, 997, 1261
BmrI ACTGGG 3 cut(s) 687, 1334, 1514
BmsI GCATC 4 cut(s) 277, 436, 789, 1303
BmuI ACTGGG 3 cut(s) 687, 1334, 1514
BpiI GAAGAC 1 cut(s) 993
Bpu1102I GCTNAGC 1 cut(s) 291
BpuEI CTTGAG 2 cut(s) 1392, 1460
BpuMI CCSGG 2 cut(s) 891, 1261
BsaBI GATNNNNATC 2 cut(s) 579, 977
BsaJI CCNNGG 2 cut(s) 171, 1566
BsaXI ACNNNNNCTCC 2 cut(s) 977, 1007
Bsc4I CCNNNNNNNGG 5 cut(s) 343, 1135, 1344, 1524, 1572
Bse118I RCCGGY 1 cut(s) 1662
Bse1I ACTGG 4 cut(s) 682, 1129, 1340, 1520
Bse3DI GCAATG 3 cut(s) 1323, 1350, 1503
Bse8I GATNNNNATC 2 cut(s) 579, 977
BseBI CCWGG 2 cut(s) 280, 997
BseDI CCNNGG 2 cut(s) 171, 1566
BseGI GGATG 3 cut(s) 580, 628, 1581
BseJI GATNNNNATC 2 cut(s) 579, 977
BseLI CCNNNNNNNGG 5 cut(s) 343, 1135, 1344, 1524, 1572
BseMI GCAATG 3 cut(s) 1323, 1350, 1503
BseMII CTCAG 6 cut(s) 180, 305, 751, 840, 942, 1310
BseNI ACTGG 4 cut(s) 682, 1129, 1340, 1520
BseRI GAGGAG 3 cut(s) 104, 648, 924
BseXI GCAGC 3 cut(s) 1424, 1603, 1648
BsgI GTGCAG 2 cut(s) 496, 1012
BshFI GGCC 5 cut(s) 278, 283, 1128, 1564, 1662
BshNI GGYRCC 2 cut(s) 989, 1674
BsiHKAI GWGCWC 1 cut(s) 1107
BsiSI CCGG 3 cut(s) 891, 1261, 1663
BslFI GGGAC 1 cut(s) 730
BslI CCNNNNNNNGG 5 cut(s) 343, 1135, 1344, 1524, 1572
BsmAI GTCTC 2 cut(s) 777, 1339
BsmFI GGGAC 1 cut(s) 730
BsnI GGCC 5 cut(s) 278, 283, 1128, 1564, 1662
Bsp1286I GDGCHC 1 cut(s) 1107
Bsp143I GATC 2 cut(s) 730, 1059
Bsp1720I GCTNAGC 1 cut(s) 291
BspACI CCGC 2 cut(s) 331, 741
BspANI GGCC 5 cut(s) 278, 283, 1128, 1564, 1662
BspCNI CTCAG 6 cut(s) 181, 304, 750, 841, 943, 1309
BspHI TCATGA 1 cut(s) 1281
BspLI GGNNCC 4 cut(s) 207, 957, 991, 1676
BspMI ACCTGC 1 cut(s) 124
BspPI GGATC 1 cut(s) 1054
BspT107I GGYRCC 2 cut(s) 989, 1674
BspTI CTTAAG 1 cut(s) 1418
BsrDI GCAATG 3 cut(s) 1323, 1350, 1503
BsrFI RCCGGY 1 cut(s) 1662
BsrI ACTGG 4 cut(s) 682, 1129, 1340, 1520
BssAI RCCGGY 1 cut(s) 1662
BssECI CCNNGG 2 cut(s) 171, 1566
BssMI GATC 2 cut(s) 730, 1059
BssT1I CCWWGG 1 cut(s) 1566
Bst2UI CCWGG 2 cut(s) 280, 997
Bst4CI ACNGT 2 cut(s) 989, 1218
Bst6I CTCTTC 4 cut(s) 89, 239, 623, 942
BstAFI CTTAAG 1 cut(s) 1418
BstC8I GCNNGC 5 cut(s) 528, 859, 1027, 1323, 1503
BstDEI CTNAG 7 cut(s) 189, 291, 737, 849, 951, 1296, 1707
BstDSI CCRYGG 1 cut(s) 171
BstEII GGTNACC 1 cut(s) 323
BstF5I GGATG 3 cut(s) 580, 628, 1581
BstH2I RGCGCY 1 cut(s) 265
BstHHI GCGC 2 cut(s) 264, 532
BstKTI GATC 2 cut(s) 733, 1062
BstMAI GTCTC 2 cut(s) 777, 1339
BstMBI GATC 2 cut(s) 730, 1059
BstMWI GCNNNNNNNGC 8 cut(s) 863, 1026, 1322, 1382, 1502, 1561, 1591, 1683
BstNI CCWGG 2 cut(s) 280, 997
BstNSI RCATGY 1 cut(s) 1538
BstPI GGTNACC 1 cut(s) 323
BstSCI CCNGG 4 cut(s) 278, 889, 995, 1259
BstV1I GCAGC 3 cut(s) 1424, 1603, 1648
BstV2I GAAGAC 1 cut(s) 993
BstX2I RGATCY 1 cut(s) 1059
BstXI CCANNNNNNTGG 1 cut(s) 36
BstYI RGATCY 1 cut(s) 1059
BsuI GTATCC 2 cut(s) 436, 989
BsuRI GGCC 5 cut(s) 278, 283, 1128, 1564, 1662
BtgI CCRYGG 1 cut(s) 171
BtsCI GGATG 3 cut(s) 580, 628, 1581
BtsI GCAGTG 1 cut(s) 63
BtsIMutI CAGTG 1 cut(s) 63
BveI ACCTGC 1 cut(s) 124
Cac8I GCNNGC 5 cut(s) 528, 859, 1027, 1323, 1503
CaiI CAGNNNCTG 1 cut(s) 802
CciI TCATGA 1 cut(s) 1281
CfoI GCGC 2 cut(s) 264, 532
Cfr10I RCCGGY 1 cut(s) 1662
Cfr13I GGNCC 2 cut(s) 282, 1563
Csp6I GTAC 7 cut(s) 178, 639, 824, 846, 990, 1428, 1607
CviAII CATG 6 cut(s) 30, 764, 1055, 1282, 1535, 1588
CviQI GTAC 7 cut(s) 178, 639, 824, 846, 990, 1428, 1607
DdeI CTNAG 7 cut(s) 189, 291, 737, 849, 951, 1296, 1707
DpnI GATC 2 cut(s) 732, 1061
DpnII GATC 2 cut(s) 730, 1059
EaeI YGGCCR 1 cut(s) 1126
Eam1104I CTCTTC 4 cut(s) 89, 239, 623, 942
EarI CTCTTC 4 cut(s) 89, 239, 623, 942
Ecl136II GAGCTC 1 cut(s) 1105
Eco130I CCWWGG 1 cut(s) 1566
Eco24I GRGCYC 1 cut(s) 1107
Eco47III AGCGCT 1 cut(s) 263
Eco53kI GAGCTC 1 cut(s) 1105
Eco57I CTGAAG 5 cut(s) 779, 923, 1174, 1349, 1528
Eco91I GGTNACC 1 cut(s) 323
EcoICRI GAGCTC 1 cut(s) 1105
EcoO65I GGTNACC 1 cut(s) 323
EcoRI GAATTC 2 cut(s) 40, 128
EcoRII CCWGG 2 cut(s) 278, 995
EcoT14I CCWWGG 1 cut(s) 1566
EcoT38I GRGCYC 1 cut(s) 1107
ErhI CCWWGG 1 cut(s) 1566
FaeI CATG 6 cut(s) 33, 767, 1058, 1285, 1538, 1591
FalI AAGNNNNNCTT 6 cut(s) 216, 248, 813, 845, 1401, 1433
FaqI GGGAC 1 cut(s) 730
FatI CATG 6 cut(s) 29, 763, 1054, 1281, 1534, 1587
Fnu4HI GCNGC 3 cut(s) 1413, 1592, 1637
FokI GGATG 3 cut(s) 587, 635, 1588
FriOI GRGCYC 1 cut(s) 1107
Fsp4HI GCNGC 3 cut(s) 1413, 1592, 1637
FspBI CTAG 8 cut(s) 503, 585, 647, 759, 770, 1064, 1658, 1679
GlaI GCGC 2 cut(s) 263, 531
GluI GCNGC 3 cut(s) 1413, 1592, 1637
HaeII RGCGCY 1 cut(s) 265
HaeIII GGCC 5 cut(s) 278, 283, 1128, 1564, 1662
HapII CCGG 3 cut(s) 891, 1261, 1663
HhaI GCGC 2 cut(s) 264, 532
Hin1II CATG 6 cut(s) 33, 767, 1058, 1285, 1538, 1591
Hin6I GCGC 2 cut(s) 262, 530
HinP1I GCGC 2 cut(s) 262, 530
HincII GTYRAC 1 cut(s) 1668
HindII GTYRAC 1 cut(s) 1668
HinfI GANTC 9 cut(s) 718, 778, 809, 931, 1139, 1148, 1166, 1439, 1618
HpaII CCGG 3 cut(s) 891, 1261, 1663
HphI GGTGA 4 cut(s) 317, 386, 1002, 1591
Hpy166II GTNNAC 3 cut(s) 878, 1122, 1668
Hpy188I TCNGA 8 cut(s) 190, 243, 397, 798, 886, 942, 1193, 1299
Hpy188III TCNNGA 9 cut(s) 65, 74, 125, 503, 662, 724, 782, 870, 1282
Hpy8I GTNNAC 3 cut(s) 878, 1122, 1668
HpyAV CCTTC 5 cut(s) 46, 196, 365, 969, 1029
HpyCH4III ACNGT 2 cut(s) 989, 1218
HpyF10VI GCNNNNNNNGC 8 cut(s) 863, 1026, 1322, 1382, 1502, 1561, 1591, 1683
HpyF3I CTNAG 7 cut(s) 189, 291, 737, 849, 951, 1296, 1707
Hsp92II CATG 6 cut(s) 33, 767, 1058, 1285, 1538, 1591
HspAI GCGC 2 cut(s) 262, 530
KpnI GGTACC 1 cut(s) 993
Kzo9I GATC 2 cut(s) 730, 1059
LmnI GCTCC 2 cut(s) 211, 1628
Lsp1109I GCAGC 3 cut(s) 1424, 1603, 1648
LweI GCATC 4 cut(s) 277, 436, 789, 1303
MaeI CTAG 8 cut(s) 503, 585, 647, 759, 770, 1064, 1658, 1679
MaeIII GTNAC 5 cut(s) 323, 483, 551, 685, 1286
MalI GATC 2 cut(s) 732, 1061
MboI GATC 2 cut(s) 730, 1059
MflI RGATCY 1 cut(s) 1059
MhlI GDGCHC 1 cut(s) 1107
MlsI TGGCCA 1 cut(s) 1128
MluCI AATT 7 cut(s) 40, 128, 249, 296, 349, 558, 1251
MluNI TGGCCA 1 cut(s) 1128
MlyI GAGTC 2 cut(s) 712, 925
MmeI TCCRAC 4 cut(s) 375, 1210, 1271, 1441
Mox20I TGGCCA 1 cut(s) 1128
MscI TGGCCA 1 cut(s) 1128
MseI TTAA 6 cut(s) 147, 258, 473, 546, 1176, 1419
MslI CAYNNNNRTG 1 cut(s) 1533
Msp20I TGGCCA 1 cut(s) 1128
MspA1I CMGCKG 2 cut(s) 741, 1639
MspCI CTTAAG 1 cut(s) 1418
MspI CCGG 3 cut(s) 891, 1261, 1663
MspR9I CCNGG 4 cut(s) 280, 891, 997, 1261
MvaI CCWGG 2 cut(s) 280, 997
MwoI GCNNNNNNNGC 8 cut(s) 863, 1026, 1322, 1382, 1502, 1561, 1591, 1683
NciI CCSGG 2 cut(s) 891, 1261
NdeII GATC 2 cut(s) 730, 1059
NlaIII CATG 6 cut(s) 33, 767, 1058, 1285, 1538, 1591
NlaIV GGNNCC 4 cut(s) 207, 957, 991, 1676
NmeAIII GCCGAG 1 cut(s) 996
NmuCI GTSAC 2 cut(s) 323, 1286
NspI RCATGY 1 cut(s) 1538
PagI TCATGA 1 cut(s) 1281
PfeI GAWTC 7 cut(s) 778, 809, 1139, 1148, 1166, 1439, 1618
PflMI CCANNNNNTGG 1 cut(s) 343
PkrI GCNGC 3 cut(s) 1414, 1593, 1638
PleI GAGTC 2 cut(s) 712, 925
PpsI GAGTC 2 cut(s) 712, 925
PsiI TTATAA 1 cut(s) 222
Psp124BI GAGCTC 1 cut(s) 1107
Psp6I CCWGG 2 cut(s) 278, 995
PspEI GGTNACC 1 cut(s) 323
PspGI CCWGG 2 cut(s) 278, 995
PspN4I GGNNCC 4 cut(s) 207, 957, 991, 1676
PspPI GGNCC 2 cut(s) 282, 1563
PstNI CAGNNNCTG 1 cut(s) 802
PsuI RGATCY 1 cut(s) 1059
PvuII CAGCTG 1 cut(s) 1639
RsaI GTAC 7 cut(s) 179, 640, 825, 847, 991, 1429, 1608
RsaNI GTAC 7 cut(s) 178, 639, 824, 846, 990, 1428, 1607
RseI CAYNNNNRTG 1 cut(s) 1533
SacI GAGCTC 1 cut(s) 1107
SaqAI TTAA 6 cut(s) 147, 258, 473, 546, 1176, 1419
SatI GCNGC 3 cut(s) 1413, 1592, 1637
Sau3AI GATC 2 cut(s) 730, 1059
Sau96I GGNCC 2 cut(s) 282, 1563
SchI GAGTC 2 cut(s) 712, 925
ScrFI CCNGG 4 cut(s) 280, 891, 997, 1261
SduI GDGCHC 1 cut(s) 1107
SfaNI GCATC 4 cut(s) 277, 436, 789, 1303
SmiMI CAYNNNNRTG 1 cut(s) 1533
SmlI CTYRAG 3 cut(s) 1407, 1418, 1475
SmoI CTYRAG 3 cut(s) 1407, 1418, 1475
Sse9I AATT 7 cut(s) 40, 128, 249, 296, 349, 558, 1251
SsiI CCGC 2 cut(s) 331, 741
SspI AATATT 1 cut(s) 214
SspMI CTAG 8 cut(s) 503, 585, 647, 759, 770, 1064, 1658, 1679
SstI GAGCTC 1 cut(s) 1107
StyD4I CCNGG 4 cut(s) 278, 889, 995, 1259
StyI CCWWGG 1 cut(s) 1566
TaaI ACNGT 2 cut(s) 989, 1218
TaqI TCGA 2 cut(s) 66, 781
TaqII GACCGA 1 cut(s) 311
TasI AATT 7 cut(s) 40, 128, 249, 296, 349, 558, 1251
TatI WGTACW 3 cut(s) 177, 638, 823
TfiI GAWTC 7 cut(s) 778, 809, 1139, 1148, 1166, 1439, 1618
Tru1I TTAA 6 cut(s) 147, 258, 473, 546, 1176, 1419
Tru9I TTAA 6 cut(s) 147, 258, 473, 546, 1176, 1419
TscAI CASTG 1 cut(s) 63
TseFI GTSAC 2 cut(s) 323, 1286
TseI GCWGC 3 cut(s) 1412, 1591, 1636
Tsp45I GTSAC 2 cut(s) 323, 1286
TspDTI ATGAA 7 cut(s) 65, 393, 425, 426, 470, 623, 1210
TspGWI ACGGA 1 cut(s) 1615
TspRI CASTG 1 cut(s) 63
Van91I CCANNNNNTGG 1 cut(s) 343
Vha464I CTTAAG 1 cut(s) 1418
XapI RAATTY 3 cut(s) 40, 128, 558
XbaI TCTAGA 1 cut(s) 502
XceI RCATGY 1 cut(s) 1538
XcmI CCANNNNNNNNNTGG 1 cut(s) 1121
XspI CTAG 8 cut(s) 503, 585, 647, 759, 770, 1064, 1658, 1679
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.