AT4G03130

Regulator of Ty1 transposition protein 107 BRCT domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0011125
Physical Location & Seq
Reverse (-)
1387781 .. 1390781
3001 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G03130.2

Sequence Viewer

Length: 2301 bp
ATGGAAACCGAAGATTTCGCCTCCGATTTGCAGTCTCCTTCAGCTTCTTCGGATCATAGGTTTGAGGTTAATCGGATTTTGGGATGTGGGGAAATTGAAGATACAGAGGCGATTGATGAAGCATTAGTACTTAATAGCTCGTTACTTGAAACCCCATTTCAAGTGCTCTACGACGATACGGAGCTAGTAGATAACGGAAATTGTGGTGACGAGGAATCACTGAACCAGGAATGTTACGGTCTCGACCAAGTGGTGGTGGATGATAGTGATGATGAAGATGGAAGTGTCGCTGCTGGTGAGCCGATGTGTTTGCCGGAGCTAAGCCCGAAAGCTGGAGATATACTTTTGGAGTCTGATGGATCAAATGATCACGAATGTCAAACAGGCAAGCAAGAATCAAATTGTGATACAGTGACCGGTTTCCAAGGTTCATTGCGGATTACTGCTAGTAGCCATGGTCCAGGGCTTGATTTTTTGGATTCTCAAGAACCAGGAGAGTCAACACAAGCAGATGCCCTTGGTTTTGTTGACCACTTTTTGATGGACAAAGATCTAAATTTGTCTCCAGTTGATCTCCCGGTTAATAGTTGCAGAAGGAAGTCATCTCCTGTATCAGGTGCAAAAGGATGTCAATCTCTGGCCAAAAGAATTATGAGCAGAAGTCCAACCAGGAAAATGAGTGTCTTTGATTGGAGTAGTGATCAGTGTGATGTGAGTGACCCTAAAACCTCTCCAGTCACTCGTGCAAGTATTACATGCTCCAAGATAAGAGAAGATCAGGTTGCAGGTGATGATTTTGGAGTGAAGAAACGATCTAGGGATCCGTGTGATATTAGAAAAGTCTCAAGTCATCCCACACAAAGAGTTATGAAGAACAGTTCTGCAAAGCATCTCAAGATGGAACAAGCATCGGGTTTGAGTGAGGGCATTATGTTTATCTCACAGAAGGATGCTCAGTTGGAGGATAAGGCGCCAAAGGAGCCCTTGGAACCCGAGGAAGACTTTATTGACATTGGTATTAACACTCAAATTGCTGCTGAAGCAATGAGTGCTTTAGTGTATGCTCCCTGTACTACAGAAGAAGCTTGTGAATCAGACCCAATTCCTGGGAGTGTATCAGAAATGAGGGATCAAGTTAGTAATCTTTCTAGAAGGAACAATGATACCATTGAGGGTGAACCTGAAAGAGACAAATTGAATGGTCTGTTTAGTGCTGCTCCACACAGGGAAAGAAACTCTAAGAAGAAGAGAAAATTCACCAATGAAGAGAGAACCAGAGCTAACGTCTCTGTTAAAACATGTCTTCTCAACTTATGTGAATGGAGGCATCCCAGAGCCAAAAGATCACGTCTTATGCAAAGACATCACGTCCCACCTAGGAGATCTTGGGGTGCTAGTTTAGTTAAAGACAGAAGTGAAACCAACACTTTGTCAAGCAGCTTACGAGGATCGTTAAGTGGGACAAGACAAGCCTCTTCTTGCCAATCAGGAGTCATTGACTTGAATGTTGCATATCATGCTTCTCCAAGGAAAATATATGACGGAAGTCATGAAAGCCCTTGCAATAAAGATTTCCCCAGGTTATTCCTTCAGAAGGAGCTTACTACGAGCCTTGGAGGACCTGGTAAAATAGGTGACTTCGTGTGGAAAGACTTAAGGAAACGAAGAAACTTGGCACATGTTCGAGTCTTATTCAGCCAGAATCTGGATGATGAAACAGTCAAGCAGCAGAAGAAGATAATGGTTCGACTCGGAATTTCTCCGGCATCTTCATCAGCAGATTCAACACATTTCATAGCAGACAGATTTGCTCGGACAAGGAATATGTTGGAAGCCATAGCTCTTGGTAAATTTGTTGTTACGCCTATATGGCTCGAGAGCTGTGCACAAACAAGATGCTTGATAGATGAGAAGAGTTACATTTTAAGGGATATCAAAAAGGAAAAAGACGGGTTCTGCTTGCTTACATCTTTGGCCCGTGCGAAGCAGCATCCCCTTCTTAAGGGGTTTAAAGTCTGCATCACCCCCAGCATTAAACCAAGCAGAGGTATGATTACTGATTTAGTAAAGATGACTCAAGGGCAGGTAGTGGAGGCAAGTGAGATAATTGCTGCAGAGGATAGAAACTTTCCAGAAGATGTGTTGATTCTTTCTTGCAAAGAAGATCGAGATTTCTGTCTTCCTTTCGTTAATCAAGGAGCTGTAATTTTCACCTCTGAGCTTTTACTGAATGGAATCGTGATTCAGAAACTGGAATATGCCAGGTTTGCAACGCATTATCACCAAAATCAGAGATTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RTT107_BRCT_5

Protein Analysis

766

Amino Acids

85.04

Weight (kDa)

5.56

Isoelectric Point (pI)

52.62

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RTT107_BRCT_5 PF16770 558 - 646 7.8e-10 Regulator of Ty1 transposition protein 107 BRCT domain
BRCT_2 PF16589 669 - 757 8.5e-14 BRCT domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011125)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G03130 AT4G03130 AT4G03130 AT4G03130
fragaria_vesca FvH4_2g24660
malus_domestica MD11G1297400.v1.1 MD11G1297500.v1.1
prunus_persica Prupe.8G251900_v2.0.a1 Prupe.8G251900_v2.0.a1
pyrus_communis pycom11g26140
rosa_chinensis RchiOBHm_Chr6g0292491
rosa_laevigata RLG00000012019
rosa_multiflora Rmu_sc0001354.1_g000027
rosa_roxburghii Rroxscaffold_7G00175010
rosa_rugosa Rorug06G0227200
rosa_samantha Rh6AG340400 Rh6BG347700 Rh6CG354700 Rh6DG340500
rosa_wichuraiana Rw6G029640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2299
AarI CACCTGC 1 cut(s) 776
Acc36I ACCTGC 2 cut(s) 776, 2074
AccB1I GGYRCC 1 cut(s) 970
AccB7I CCANNNNNTGG 3 cut(s) 253, 1106, 1705
AciI CCGC 1 cut(s) 436
AclWI GGATC 6 cut(s) 60, 367, 815, 828, 1137, 1456
AcoI YGGCCR 1 cut(s) 639
AcsI RAATTY 4 cut(s) 556, 1253, 1755, 1850
AcuI CTGAAG 3 cut(s) 24, 1059, 1574
AcyI GRCGYC 1 cut(s) 971
AfaI GTAC 2 cut(s) 129, 1072
AfiI CCNNNNNNNGG 8 cut(s) 253, 332, 614, 1106, 1594, 1705, 2002, 2045
AflII CTTAAG 2 cut(s) 1654, 2000
AflIII ACRYGT 2 cut(s) 1298, 1678
AgeI ACCGGT 1 cut(s) 416
AgsI TTSAA 6 cut(s) 98, 149, 161, 1198, 1504, 1785
AhdI GACNNNNNGTC 1 cut(s) 1367
AjiI CACGTC 2 cut(s) 1349, 1369
AjnI CCWGG 8 cut(s) 225, 460, 490, 668, 1105, 1577, 1621, 2261
Alw21I GWGCWC 2 cut(s) 168, 1888
Alw26I GTCTC 6 cut(s) 39, 245, 567, 847, 1182, 1291
Alw44I GTGCAC 1 cut(s) 1884
AlwI GGATC 6 cut(s) 60, 367, 815, 828, 1137, 1456
AlwNI CAGNNNCTG 2 cut(s) 1705, 2251
Ama87I CYCGRG 2 cut(s) 992, 1874
AoxI GGCC 2 cut(s) 639, 1974
ApaLI GTGCAC 1 cut(s) 1884
ApeKI GCWGC 7 cut(s) 290, 1034, 1214, 1437, 1726, 1987, 2111
ApoI RAATTY 4 cut(s) 556, 1253, 1755, 1850
AsiGI ACCGGT 1 cut(s) 416
AspA2I CCTAGG 1 cut(s) 1376
AspLEI GCGC 1 cut(s) 973
AspS9I GGNCC 3 cut(s) 458, 1619, 1975
AsuC2I CCSGG 1 cut(s) 578
AsuHPI GGTGA 9 cut(s) 218, 308, 800, 1187, 1249, 1646, 2014, 2203, 2273
AvaI CYCGRG 2 cut(s) 992, 1874
AvaII GGWCC 2 cut(s) 458, 1619
AvrII CCTAGG 1 cut(s) 1376
BaeGI GKGCMC 1 cut(s) 1888
BalI TGGCCA 1 cut(s) 641
BamHI GGATCC 1 cut(s) 820
BanI GGYRCC 1 cut(s) 970
BanII GRGCYC 1 cut(s) 984
BarI GAAGNNNNNNTAC 2 cut(s) 111, 143
BauI CACGAG 1 cut(s) 741
BbsI GAAGAC 3 cut(s) 1005, 1295, 2171
Bbv12I GWGCWC 2 cut(s) 168, 1888
BbvI GCAGC 7 cut(s) 277, 1021, 1201, 1449, 1738, 1999, 2098
BccI CCATC 4 cut(s) 272, 350, 535, 892
BcgI CGANNNNNNTGC 4 cut(s) 292, 326, 1865, 1899
BciT130I CCWGG 8 cut(s) 227, 462, 492, 670, 1107, 1579, 1623, 2263
BclI TGATCA 2 cut(s) 367, 700
BcnI CCSGG 1 cut(s) 578
BcoDI GTCTC 6 cut(s) 39, 245, 567, 847, 1182, 1291
BfaI CTAG 6 cut(s) 185, 447, 816, 1149, 1377, 1395
BfmI CTRYAG 2 cut(s) 1074, 2112
BfoI RGCGCY 1 cut(s) 974
BfrI CTTAAG 2 cut(s) 1654, 2000
BfuAI ACCTGC 2 cut(s) 776, 2074
BglI GCCNNNNNGGC 1 cut(s) 1870
BglII AGATCT 2 cut(s) 550, 1382
BisI GCNGC 7 cut(s) 291, 1035, 1215, 1438, 1727, 1988, 2112
BlnI CCTAGG 1 cut(s) 1376
BlpI GCTNAGC 1 cut(s) 320
BlsI GCNGC 7 cut(s) 292, 1036, 1216, 1439, 1728, 1989, 2113
BmcAI AGTACT 1 cut(s) 129
Bme1390I CCNGG 9 cut(s) 227, 462, 492, 578, 670, 1107, 1579, 1623, 2263
Bme18I GGWCC 2 cut(s) 458, 1619
BmeRI GACNNNNNGTC 1 cut(s) 1367
BmeT110I CYCGRG 2 cut(s) 992, 1874
BmgBI CACGTC 2 cut(s) 1349, 1369
BmgT120I GGNCC 3 cut(s) 458, 1619, 1975
BmiI GGNNCC 4 cut(s) 822, 972, 981, 990
BmrFI CCNGG 9 cut(s) 227, 462, 492, 578, 670, 1107, 1579, 1623, 2263
BmsI GCATC 9 cut(s) 502, 898, 917, 940, 1336, 1775, 1886, 1999, 2028
BoxI GACNNNNGTC 1 cut(s) 1545
BpiI GAAGAC 3 cut(s) 1005, 1295, 2171
BpmI CTGGAG 3 cut(s) 354, 549, 717
Bpu1102I GCTNAGC 1 cut(s) 320
BpuEI CTTGAG 4 cut(s) 468, 829, 878, 2061
BpuMI CCSGG 1 cut(s) 578
BsaBI GATNNNNATC 1 cut(s) 631
BsaHI GRCGYC 1 cut(s) 971
BsaI GGTCTC 1 cut(s) 245
BsaWI WCCGGW 1 cut(s) 416
Bsc4I CCNNNNNNNGG 8 cut(s) 253, 332, 614, 1106, 1594, 1705, 2002, 2045
Bse118I RCCGGY 1 cut(s) 416
Bse1I ACTGG 3 cut(s) 566, 734, 2256
Bse3DI GCAATG 2 cut(s) 431, 1050
Bse8I GATNNNNATC 1 cut(s) 631
BseBI CCWGG 8 cut(s) 227, 462, 492, 670, 1107, 1579, 1623, 2263
BseGI GGATG 8 cut(s) 89, 265, 632, 850, 955, 1327, 1714, 1990
BseJI GATNNNNATC 1 cut(s) 631
BseLI CCNNNNNNNGG 8 cut(s) 253, 332, 614, 1106, 1594, 1705, 2002, 2045
BseMI GCAATG 2 cut(s) 431, 1050
BseMII CTCAG 2 cut(s) 968, 2208
BseNI ACTGG 3 cut(s) 566, 734, 2256
BseSI GKGCMC 1 cut(s) 1888
BseXI GCAGC 7 cut(s) 277, 1021, 1201, 1449, 1738, 1999, 2098
BseYI CCCAGC 1 cut(s) 2027
BshFI GGCC 2 cut(s) 641, 1976
BshNI GGYRCC 1 cut(s) 970
BshTI ACCGGT 1 cut(s) 416
BsiHKAI GWGCWC 2 cut(s) 168, 1888
BsiHKCI CYCGRG 2 cut(s) 992, 1874
BsiSI CCGG 4 cut(s) 314, 417, 578, 1763
BslFI GGGAC 2 cut(s) 1355, 1474
BslI CCNNNNNNNGG 8 cut(s) 253, 332, 614, 1106, 1594, 1705, 2002, 2045
BsmAI GTCTC 6 cut(s) 39, 245, 567, 847, 1182, 1291
BsmBI CGTCTC 1 cut(s) 1291
BsmFI GGGAC 2 cut(s) 1355, 1474
BsnI GGCC 2 cut(s) 641, 1976
Bso31I GGTCTC 1 cut(s) 245
BsoBI CYCGRG 2 cut(s) 992, 1874
Bsp1286I GDGCHC 3 cut(s) 168, 984, 1888
Bsp1720I GCTNAGC 1 cut(s) 320
Bsp19I CCATGG 1 cut(s) 454
BspACI CCGC 1 cut(s) 436
BspANI GGCC 2 cut(s) 641, 1976
BspCNI CTCAG 2 cut(s) 967, 2209
BspHI TCATGA 1 cut(s) 1549
BspLI GGNNCC 4 cut(s) 822, 972, 981, 990
BspMAI CTGCAG 1 cut(s) 2116
BspMI ACCTGC 2 cut(s) 776, 2074
BspPI GGATC 6 cut(s) 60, 367, 815, 828, 1137, 1456
BspT107I GGYRCC 1 cut(s) 970
BspTI CTTAAG 2 cut(s) 1654, 2000
BspTNI GGTCTC 1 cut(s) 245
BsrDI GCAATG 2 cut(s) 431, 1050
BsrFI RCCGGY 1 cut(s) 416
BsrI ACTGG 3 cut(s) 566, 734, 2256
BssAI RCCGGY 1 cut(s) 416
BssNI GRCGYC 1 cut(s) 971
BssSI CACGAG 1 cut(s) 741
BssT1I CCWWGG 7 cut(s) 424, 454, 517, 984, 1376, 1526, 1612
Bst2BI CACGAG 1 cut(s) 741
Bst2UI CCWGG 8 cut(s) 227, 462, 492, 670, 1107, 1579, 1623, 2263
Bst4CI ACNGT 4 cut(s) 239, 412, 878, 1720
Bst6I CTCTTC 4 cut(s) 1241, 1260, 1480, 1907
BstACI GRCGYC 1 cut(s) 971
BstAFI CTTAAG 2 cut(s) 1654, 2000
BstAPI GCANNNNNTGC 2 cut(s) 1049, 1517
BstC8I GCNNGC 2 cut(s) 389, 1961
BstDEI CTNAG 4 cut(s) 320, 954, 1239, 2217
BstDSI CCRYGG 1 cut(s) 454
BstENI CCTNNNNNAGG 3 cut(s) 612, 1592, 2000
BstF5I GGATG 8 cut(s) 89, 265, 632, 850, 955, 1327, 1714, 1990
BstH2I RGCGCY 1 cut(s) 974
BstHHI GCGC 1 cut(s) 973
BstMAI GTCTC 6 cut(s) 39, 245, 567, 847, 1182, 1291
BstMWI GCNNNNNNNGC 6 cut(s) 979, 1040, 1049, 1517, 1870, 2267
BstNI CCWGG 8 cut(s) 227, 462, 492, 670, 1107, 1579, 1623, 2263
BstNSI RCATGY 3 cut(s) 759, 1302, 1682
BstPAI GACNNNNGTC 1 cut(s) 1545
BstSCI CCNGG 9 cut(s) 225, 460, 490, 576, 668, 1105, 1577, 1621, 2261
BstSFI CTRYAG 2 cut(s) 1074, 2112
BstSLI GKGCMC 1 cut(s) 1888
BstV1I GCAGC 7 cut(s) 277, 1021, 1201, 1449, 1738, 1999, 2098
BstV2I GAAGAC 3 cut(s) 1005, 1295, 2171
BstX2I RGATCY 3 cut(s) 550, 820, 1382
BstYI RGATCY 3 cut(s) 550, 820, 1382
BsuRI GGCC 2 cut(s) 641, 1976
BtgI CCRYGG 1 cut(s) 454
BtrI CACGTC 2 cut(s) 1349, 1369
BtsCI GGATG 8 cut(s) 89, 265, 632, 850, 955, 1327, 1714, 1990
BtsIMutI CAGTG 3 cut(s) 218, 417, 710
BveI ACCTGC 2 cut(s) 776, 2074
Cac8I GCNNGC 2 cut(s) 389, 1961
CaiI CAGNNNCTG 2 cut(s) 1705, 2251
CciI TCATGA 1 cut(s) 1549
CfoI GCGC 1 cut(s) 973
Cfr10I RCCGGY 1 cut(s) 416
Cfr13I GGNCC 3 cut(s) 458, 1619, 1975
CsiI ACCWGGT 1 cut(s) 1621
Csp6I GTAC 2 cut(s) 128, 1071
CspAI ACCGGT 1 cut(s) 416
CviAII CATG 6 cut(s) 455, 756, 1299, 1517, 1550, 1679
CviQI GTAC 2 cut(s) 128, 1071
DdeI CTNAG 4 cut(s) 320, 954, 1239, 2217
DinI GGCGCC 1 cut(s) 972
DraI TTTAAA 1 cut(s) 2011
DriI GACNNNNNGTC 1 cut(s) 1367
EaeI YGGCCR 1 cut(s) 639
Eam1104I CTCTTC 4 cut(s) 1241, 1260, 1480, 1907
Eam1105I GACNNNNNGTC 1 cut(s) 1367
EarI CTCTTC 4 cut(s) 1241, 1260, 1480, 1907
Eco130I CCWWGG 7 cut(s) 424, 454, 517, 984, 1376, 1526, 1612
Eco24I GRGCYC 1 cut(s) 984
Eco31I GGTCTC 1 cut(s) 245
Eco32I GATATC 1 cut(s) 1933
Eco47I GGWCC 2 cut(s) 458, 1619
Eco57I CTGAAG 3 cut(s) 24, 1059, 1574
Eco88I CYCGRG 2 cut(s) 992, 1874
EcoNI CCTNNNNNAGG 3 cut(s) 612, 1592, 2000
EcoO109I RGGNCCY 1 cut(s) 1619
EcoRII CCWGG 8 cut(s) 225, 460, 490, 668, 1105, 1577, 1621, 2261
EcoRV GATATC 1 cut(s) 1933
EcoT14I CCWWGG 7 cut(s) 424, 454, 517, 984, 1376, 1526, 1612
EcoT38I GRGCYC 1 cut(s) 984
EgeI GGCGCC 1 cut(s) 972
EheI GGCGCC 1 cut(s) 972
ErhI CCWWGG 7 cut(s) 424, 454, 517, 984, 1376, 1526, 1612
Esp3I CGTCTC 1 cut(s) 1291
FaeI CATG 6 cut(s) 458, 759, 1302, 1520, 1553, 1682
FalI AAGNNNNNCTT 2 cut(s) 968, 1000
FaqI GGGAC 2 cut(s) 1355, 1474
FatI CATG 6 cut(s) 454, 755, 1298, 1516, 1549, 1678
FbaI TGATCA 2 cut(s) 367, 700
Fnu4HI GCNGC 7 cut(s) 291, 1035, 1215, 1438, 1727, 1988, 2112
FokI GGATG 8 cut(s) 96, 272, 639, 837, 962, 1314, 1721, 1977
FriOI GRGCYC 1 cut(s) 984
Fsp4HI GCNGC 7 cut(s) 291, 1035, 1215, 1438, 1727, 1988, 2112
FspBI CTAG 6 cut(s) 185, 447, 816, 1149, 1377, 1395
GlaI GCGC 1 cut(s) 972
GluI GCNGC 7 cut(s) 291, 1035, 1215, 1438, 1727, 1988, 2112
GsaI CCCAGC 1 cut(s) 2031
GsuI CTGGAG 3 cut(s) 354, 549, 717
HaeII RGCGCY 1 cut(s) 974
HaeIII GGCC 2 cut(s) 641, 1976
HapII CCGG 4 cut(s) 314, 417, 578, 1763
HhaI GCGC 1 cut(s) 973
Hin1I GRCGYC 1 cut(s) 971
Hin1II CATG 6 cut(s) 458, 759, 1302, 1520, 1553, 1682
Hin6I GCGC 1 cut(s) 971
HinP1I GCGC 1 cut(s) 971
HincII GTYRAC 2 cut(s) 501, 529
HindII GTYRAC 2 cut(s) 501, 529
HindIII AAGCTT 1 cut(s) 1083
HpaII CCGG 4 cut(s) 314, 417, 578, 1763
HphI GGTGA 9 cut(s) 218, 308, 800, 1187, 1249, 1646, 2014, 2203, 2273
Hpy166II GTNNAC 4 cut(s) 501, 529, 1178, 1886
Hpy8I GTNNAC 4 cut(s) 501, 529, 1178, 1886
Hpy99I CGWCG 1 cut(s) 176
HpyAV CCTTC 7 cut(s) 48, 588, 940, 1146, 1588, 1598, 2006
HpyCH4III ACNGT 4 cut(s) 239, 412, 878, 1720
HpyCH4IV ACGT 3 cut(s) 1284, 1348, 1368
HpyF10VI GCNNNNNNNGC 6 cut(s) 979, 1040, 1049, 1517, 1870, 2267
HpyF3I CTNAG 4 cut(s) 320, 954, 1239, 2217
HpySE526I ACGT 3 cut(s) 1284, 1348, 1368
Hsp92I GRCGYC 1 cut(s) 971
Hsp92II CATG 6 cut(s) 458, 759, 1302, 1520, 1553, 1682
HspAI GCGC 1 cut(s) 971
KasI GGCGCC 1 cut(s) 970
Ksp22I TGATCA 2 cut(s) 367, 700
LmnI GCTCC 8 cut(s) 181, 316, 764, 979, 1069, 1222, 1597, 2198
Lsp1109I GCAGC 7 cut(s) 277, 1021, 1201, 1449, 1738, 1999, 2098
LweI GCATC 9 cut(s) 502, 898, 917, 940, 1336, 1775, 1886, 1999, 2028
MabI ACCWGGT 1 cut(s) 1621
MaeI CTAG 6 cut(s) 185, 447, 816, 1149, 1377, 1395
MaeII ACGT 3 cut(s) 1284, 1348, 1368
MaeIII GTNAC 9 cut(s) 141, 206, 233, 412, 716, 736, 1634, 1858, 1916
MflI RGATCY 3 cut(s) 550, 820, 1382
MhlI GDGCHC 3 cut(s) 168, 984, 1888
MlsI TGGCCA 1 cut(s) 641
MluNI TGGCCA 1 cut(s) 641
Mly113I GGCGCC 1 cut(s) 971
MlyI GAGTC 6 cut(s) 359, 506, 1500, 1695, 1743, 2068
MmeI TCCRAC 3 cut(s) 689, 939, 1809
Mox20I TGGCCA 1 cut(s) 641
MscI TGGCCA 1 cut(s) 641
Msp20I TGGCCA 1 cut(s) 641
MspCI CTTAAG 2 cut(s) 1654, 2000
MspI CCGG 4 cut(s) 314, 417, 578, 1763
MspR9I CCNGG 9 cut(s) 227, 462, 492, 578, 670, 1107, 1579, 1623, 2263
MvaI CCWGG 8 cut(s) 227, 462, 492, 670, 1107, 1579, 1623, 2263
MwoI GCNNNNNNNGC 6 cut(s) 979, 1040, 1049, 1517, 1870, 2267
NarI GGCGCC 1 cut(s) 971
NciI CCSGG 1 cut(s) 578
NcoI CCATGG 1 cut(s) 454
NlaIII CATG 6 cut(s) 458, 759, 1302, 1520, 1553, 1682
NlaIV GGNNCC 4 cut(s) 822, 972, 981, 990
NmuCI GTSAC 5 cut(s) 206, 412, 716, 736, 1634
NspI RCATGY 3 cut(s) 759, 1302, 1682
PaeR7I CTCGAG 1 cut(s) 1874
PagI TCATGA 1 cut(s) 1549
PaqCI CACCTGC 1 cut(s) 776
PciI ACATGT 2 cut(s) 1298, 1678
PfeI GAWTC 9 cut(s) 215, 395, 479, 1091, 1702, 1781, 2146, 2235, 2242
PflMI CCANNNNNTGG 3 cut(s) 253, 1106, 1705
PinAI ACCGGT 1 cut(s) 416
PkrI GCNGC 7 cut(s) 292, 1036, 1216, 1439, 1728, 1989, 2113
PleI GAGTC 6 cut(s) 358, 505, 1499, 1694, 1743, 2068
PluTI GGCGCC 1 cut(s) 974
PpsI GAGTC 6 cut(s) 358, 505, 1499, 1694, 1743, 2068
PpuMI RGGWCCY 1 cut(s) 1619
PscI ACATGT 2 cut(s) 1298, 1678
PshAI GACNNNNGTC 1 cut(s) 1545
PsiI TTATAA 1 cut(s) 2299
Psp5II RGGWCCY 1 cut(s) 1619
Psp6I CCWGG 8 cut(s) 225, 460, 490, 668, 1105, 1577, 1621, 2261
PspFI CCCAGC 1 cut(s) 2027
PspGI CCWGG 8 cut(s) 225, 460, 490, 668, 1105, 1577, 1621, 2261
PspN4I GGNNCC 4 cut(s) 822, 972, 981, 990
PspPI GGNCC 3 cut(s) 458, 1619, 1975
PspPPI RGGWCCY 1 cut(s) 1619
PstI CTGCAG 1 cut(s) 2116
PstNI CAGNNNCTG 2 cut(s) 1705, 2251
PsuI RGATCY 3 cut(s) 550, 820, 1382
RsaI GTAC 2 cut(s) 129, 1072
RsaNI GTAC 2 cut(s) 128, 1071
SatI GCNGC 7 cut(s) 291, 1035, 1215, 1438, 1727, 1988, 2112
Sau96I GGNCC 3 cut(s) 458, 1619, 1975
ScaI AGTACT 1 cut(s) 129
SchI GAGTC 6 cut(s) 359, 506, 1500, 1695, 1743, 2068
ScrFI CCNGG 9 cut(s) 227, 462, 492, 578, 670, 1107, 1579, 1623, 2263
SduI GDGCHC 3 cut(s) 168, 984, 1888
SexAI ACCWGGT 1 cut(s) 1621
SfaNI GCATC 9 cut(s) 502, 898, 917, 940, 1336, 1775, 1886, 1999, 2028
SfcI CTRYAG 2 cut(s) 1074, 2112
SfoI GGCGCC 1 cut(s) 972
Sfr274I CTCGAG 1 cut(s) 1874
SinI GGWCC 2 cut(s) 458, 1619
SlaI CTCGAG 1 cut(s) 1874
SmlI CTYRAG 7 cut(s) 483, 844, 893, 1654, 1874, 2000, 2076
SmoI CTYRAG 7 cut(s) 483, 844, 893, 1654, 1874, 2000, 2076
SsiI CCGC 1 cut(s) 436
SspDI GGCGCC 1 cut(s) 970
SspMI CTAG 6 cut(s) 185, 447, 816, 1149, 1377, 1395
StyD4I CCNGG 9 cut(s) 225, 460, 490, 576, 668, 1105, 1577, 1621, 2261
StyI CCWWGG 7 cut(s) 424, 454, 517, 984, 1376, 1526, 1612
TaaI ACNGT 4 cut(s) 239, 412, 878, 1720
TaiI ACGT 3 cut(s) 1287, 1351, 1371
TaqI TCGA 5 cut(s) 243, 1684, 1747, 1875, 2167
TatI WGTACW 2 cut(s) 127, 1070
TfiI GAWTC 9 cut(s) 215, 395, 479, 1091, 1702, 1781, 2146, 2235, 2242
TscAI CASTG 3 cut(s) 225, 417, 710
TseFI GTSAC 5 cut(s) 206, 412, 716, 736, 1634
TseI GCWGC 7 cut(s) 290, 1034, 1214, 1437, 1726, 1987, 2111
Tsp45I GTSAC 5 cut(s) 206, 412, 716, 736, 1634
TspDTI ATGAA 9 cut(s) 132, 288, 420, 884, 1278, 1566, 1728, 1761, 1783
TspGWI ACGGA 4 cut(s) 194, 210, 813, 1557
TspRI CASTG 3 cut(s) 225, 417, 710
Van91I CCANNNNNTGG 3 cut(s) 253, 1106, 1705
Vha464I CTTAAG 2 cut(s) 1654, 2000
VneI GTGCAC 1 cut(s) 1884
VpaK11BI GGWCC 2 cut(s) 458, 1619
XagI CCTNNNNNAGG 3 cut(s) 612, 1592, 2000
XapI RAATTY 4 cut(s) 556, 1253, 1755, 1850
XbaI TCTAGA 1 cut(s) 1148
XceI RCATGY 3 cut(s) 759, 1302, 1682
XhoI CTCGAG 1 cut(s) 1874
XmaJI CCTAGG 1 cut(s) 1376
XspI CTAG 6 cut(s) 185, 447, 816, 1149, 1377, 1395
ZrmI AGTACT 1 cut(s) 129
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.