Rmu_sc0001354.1_g000027

breast cancer carboxy-terminal domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001354.1
OG0011125
Physical Location & Seq
Reverse (-)
108567 .. 111190
2624 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001354.1_g000027.1.cds

Sequence Viewer

Length: 2217 bp
atggctgtttctcacgcccagaaccacacctctgattctcactctcacccatctgggtttaataaactcaaagatgaagatgatcagaaccaccccaaattccaagacaccgagccctttgatgagaccatggtgcctgatagcccattaatggaggaaacccagttggtggatggttcggattgcgatgacaagatgaggactggtatgagtggttttgaggatgaagtggtgcttgacagtgaggatgaggaagttaatggaagccgaatagtgactgttagaaatttgtcttcggatcgaatatgcgctgcagggttaagctacgttgactctcaggaaccaggggaggaatcccaagccaatgcacttgattttgtggatcattttgtgacgttgaacgacgatcttagtttttattctccaggaactgccaacaggaaaaccaccaaggtgcaatcccctcctgttacaaacacaaaggggactcatagtttggcgaggttggttgaactcaggtctcaaaatgaaaaagccaaagcctttgaatgggttgatcctgaggagaatggagcacttcgttttttagacaagaagatggaatcatctttggttaattctgagggcaaggagagatctggtgttgcaaggaaagagaaagtcaggcatgctaatgatgcaaagtgtattagctcaggtgatgggggcaaaaaagagaggagcacaattcgaaacctccataaggaaatcacagaatctgaaggcaagattgaaaacgagtctgtcaatgcatcagaagattatttatatgcaaaaccaacagaactccagctggaacctagtgaggaaggagcaaatatagttgacatgtttgatattggttttaacactcaaattgctgccgaagctatggaggccttagcatatgggggccatcctggctgcaatactgcagatgttggttcaggaggtgctaaagagaatacagcttctttggaacattgctctcctcaaaagagtgatttttctaatgtagcaggtattagcaaaaatgtaaaccgaagaaaccgctccactagagtaccaaggagagcaggtgcttcatctcaaaaacaatctaagaagcaagagttagatcctgatttggctgcagttgcttcatctcaaaaacaatctaagaagcaagagttagatcctgatttggcggcagcaacaaatgtgaagagaagcagattttttggcgagtcttgtagtaattttgccgaggccaacgatagtttatgtatagaatctcccaagtctgtcaagaaaaggaagctacagagtgcagctgattattccaaggtttcttcttctggaaaacaccagactacccagtcaacgtcagggggtaggtcaagaaggaccgaggatggatcaaacaatggtgtgggggatggtattgttacatacagaagaaagaagagatgtttaaaacctcaatcacatgaaatcatcagtagttctgaggctggatcagatgagccagtagaaaagaagaacaatgttaagaaggacaacattgtcacatacaggagaaagaagagaatagatgcaaaagaaagtagttcagtttatgtttcatcggagggaaatagtagcagagaagcctgtagcttaaaactaggtctatggagtcatcccaaagggaaaagaacaggtcgcaatgctcgaagcaattcctgcagagctcctgttccttctactccatttccactacttgacaaaaaggacagttcccattctgttgaaaggccagaaagcagcaacaatatggcggggaaagaacaatcatcgtattgcccaccggtgctttccttagataatgactctgacggaaccttgtttgaattgcaatctggcgagctagttgggacagatcctacatcttctggtacggaatgtactgcaccatctaactctaccactggcataaatgtgggatcatccaaatatgtatctcatgaatatcacaaaaagccatgcaacaaaaactttcccaaatcacctcttatgaaagagcttattggactaggtgtccctgagtcgatgccagattttgcttggaaagatttgagaaggcgaagaagtatggcctatgttcaagttctgtttagccagcatttggatgatgatatcattaagcagcagaaaaaggtacgttttgaatttgtctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RTT107_BRCT_5

Protein Analysis

738

Amino Acids

81.06

Weight (kDa)

6.28

Isoelectric Point (pI)

62.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011125)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G03130 AT4G03130 AT4G03130 AT4G03130
fragaria_vesca FvH4_2g24660
malus_domestica MD11G1297400.v1.1 MD11G1297500.v1.1
prunus_persica Prupe.8G251900_v2.0.a1 Prupe.8G251900_v2.0.a1
pyrus_communis pycom11g26140
rosa_chinensis RchiOBHm_Chr6g0292491
rosa_laevigata RLG00000012019
rosa_multiflora Rmu_sc0001354.1_g000027
rosa_roxburghii Rroxscaffold_7G00175010
rosa_rugosa Rorug06G0227200
rosa_samantha Rh6AG340400 Rh6BG347700 Rh6CG354700 Rh6DG340500
rosa_wichuraiana Rw6G029640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1085
AasI GACNNNNNNGTC 2 cut(s) 1375, 1562
Acc36I ACCTGC 2 cut(s) 1028, 1085
AccB1I GGYRCC 1 cut(s) 133
AccB7I CCANNNNNTGG 2 cut(s) 169, 2164
AccBSI CCGCTC 1 cut(s) 1071
AciI CCGC 3 cut(s) 1069, 1205, 1817
AclWI GGATC 9 cut(s) 306, 390, 551, 1130, 1187, 1423, 1522, 1913, 1990
AcsI RAATTY 3 cut(s) 98, 286, 2207
AcuI CTGAAG 1 cut(s) 780
AfaI GTAC 4 cut(s) 1083, 1936, 1945, 2199
AfiI CCNNNNNNNGG 5 cut(s) 151, 169, 549, 742, 2164
AflIII ACRYGT 1 cut(s) 867
AgeI ACCGGT 1 cut(s) 1846
AgsI TTSAA 8 cut(s) 400, 512, 548, 773, 1790, 1889, 2144, 2207
AhdI GACNNNNNGTC 1 cut(s) 2075
AjnI CCWGG 3 cut(s) 343, 424, 937
AleI CACNNNNGTG 1 cut(s) 452
Alw21I GWGCWC 3 cut(s) 577, 725, 1732
Alw26I GTCTC 2 cut(s) 119, 525
AlwI GGATC 9 cut(s) 306, 390, 551, 1130, 1187, 1423, 1522, 1913, 1990
AlwNI CAGNNNCTG 2 cut(s) 431, 758
AoxI GGCC 5 cut(s) 915, 931, 1266, 1793, 2133
ApeKI GCWGC 8 cut(s) 311, 899, 942, 1148, 1208, 1328, 1803, 2185
ApoI RAATTY 3 cut(s) 98, 286, 2207
ArsI GACNNNNNNTTYG 2 cut(s) 478, 510
AseI ATTAAT 1 cut(s) 149
AsiGI ACCGGT 1 cut(s) 1846
Asp700I GAANNNNTTC 1 cut(s) 1717
AspLEI GCGC 1 cut(s) 311
AspS9I GGNCC 2 cut(s) 931, 1404
AsuHPI GGTGA 3 cut(s) 38, 710, 2037
AsuII TTCGAA 1 cut(s) 730
AvaII GGWCC 1 cut(s) 1404
AxyI CCTNAGG 1 cut(s) 561
BaeI ACNNNNGTAYC 2 cut(s) 1065, 1098
BanI GGYRCC 1 cut(s) 133
BanII GRGCYC 2 cut(s) 117, 1732
BbsI GAAGAC 1 cut(s) 285
Bbv12I GWGCWC 3 cut(s) 577, 725, 1732
BbvI GCAGC 8 cut(s) 298, 886, 929, 1135, 1220, 1340, 1815, 2197
BccI CCATC 8 cut(s) 58, 167, 592, 695, 942, 1406, 1430, 1960
BciT130I CCWGG 3 cut(s) 345, 426, 939
BclI TGATCA 1 cut(s) 82
BcoDI GTCTC 2 cut(s) 119, 525
BfaI CTAG 5 cut(s) 840, 1077, 1664, 1907, 2072
BfmI CTRYAG 6 cut(s) 312, 951, 1149, 1319, 1651, 1723
BfuAI ACCTGC 2 cut(s) 1028, 1085
BglI GCCNNNNNGGC 1 cut(s) 939
BglII AGATCT 1 cut(s) 635
BisI GCNGC 9 cut(s) 312, 900, 943, 1149, 1206, 1209, 1329, 1804, 2186
BlsI GCNGC 9 cut(s) 313, 901, 944, 1150, 1207, 1210, 1330, 1805, 2187
Bme1390I CCNGG 3 cut(s) 345, 426, 939
Bme18I GGWCC 1 cut(s) 1404
BmeRI GACNNNNNGTC 1 cut(s) 2075
BmgT120I GGNCC 2 cut(s) 931, 1404
BmiI GGNNCC 5 cut(s) 135, 342, 837, 932, 1879
BmrFI CCNGG 3 cut(s) 345, 426, 939
BmrI ACTGGG 2 cut(s) 157, 1369
BmsI GCATC 4 cut(s) 667, 800, 1582, 2079
BmuI ACTGGG 2 cut(s) 157, 1369
BpiI GAAGAC 1 cut(s) 285
BpmI CTGGAG 2 cut(s) 408, 812
Bpu10I CCTNAGC 2 cut(s) 694, 919
Bpu14I TTCGAA 1 cut(s) 730
BsaI GGTCTC 2 cut(s) 119, 525
BsaJI CCNNGG 7 cut(s) 129, 344, 450, 1085, 1263, 1341, 1407
BsaWI WCCGGW 1 cut(s) 1846
BsaXI ACNNNNNCTCC 2 cut(s) 1081, 1111
Bsc4I CCNNNNNNNGG 5 cut(s) 151, 169, 549, 742, 2164
Bse118I RCCGGY 1 cut(s) 1846
Bse1I ACTGG 5 cut(s) 163, 208, 1375, 1526, 1972
Bse21I CCTNAGG 1 cut(s) 561
Bse3DI GCAATG 2 cut(s) 1000, 1711
BseBI CCWGG 3 cut(s) 345, 426, 939
BseDI CCNNGG 7 cut(s) 129, 344, 450, 1085, 1263, 1341, 1407
BseGI GGATG 9 cut(s) 178, 229, 253, 934, 1417, 1441, 1678, 1985, 2173
BseLI CCNNNNNNNGG 5 cut(s) 151, 169, 549, 742, 2164
BseMI GCAATG 2 cut(s) 1000, 1711
BseMII CTCAG 7 cut(s) 350, 529, 552, 612, 708, 1497, 2073
BseNI ACTGG 5 cut(s) 163, 208, 1375, 1526, 1972
BseRI GAGGAG 3 cut(s) 578, 733, 999
BseXI GCAGC 8 cut(s) 298, 886, 929, 1135, 1220, 1340, 1815, 2197
BsgI GTGCAG 2 cut(s) 1347, 1932
BshFI GGCC 5 cut(s) 917, 933, 1268, 1795, 2135
BshNI GGYRCC 1 cut(s) 133
BshTI ACCGGT 1 cut(s) 1846
BsiHKAI GWGCWC 3 cut(s) 577, 725, 1732
BsiSI CCGG 1 cut(s) 1847
BslFI GGGAC 3 cut(s) 499, 1927, 2063
BslI CCNNNNNNNGG 5 cut(s) 151, 169, 549, 742, 2164
BsmAI GTCTC 2 cut(s) 119, 525
BsmFI GGGAC 3 cut(s) 499, 1927, 2063
BsnI GGCC 5 cut(s) 917, 933, 1268, 1795, 2135
Bso31I GGTCTC 2 cut(s) 119, 525
Bsp119I TTCGAA 1 cut(s) 730
Bsp1286I GDGCHC 4 cut(s) 117, 577, 725, 1732
Bsp19I CCATGG 1 cut(s) 129
BspACI CCGC 3 cut(s) 1069, 1205, 1817
BspANI GGCC 5 cut(s) 917, 933, 1268, 1795, 2135
BspCNI CTCAG 7 cut(s) 349, 528, 553, 613, 707, 1498, 2074
BspHI TCATGA 1 cut(s) 2002
BspLI GGNNCC 5 cut(s) 135, 342, 837, 932, 1879
BspMAI CTGCAG 4 cut(s) 316, 955, 1153, 1727
BspMI ACCTGC 2 cut(s) 1028, 1085
BspPI GGATC 9 cut(s) 306, 390, 551, 1130, 1187, 1423, 1522, 1913, 1990
BspT104I TTCGAA 1 cut(s) 730
BspT107I GGYRCC 1 cut(s) 133
BspTNI GGTCTC 2 cut(s) 119, 525
BsrBI CCGCTC 1 cut(s) 1071
BsrDI GCAATG 2 cut(s) 1000, 1711
BsrFI RCCGGY 1 cut(s) 1846
BsrI ACTGG 5 cut(s) 163, 208, 1375, 1526, 1972
BssAI RCCGGY 1 cut(s) 1846
BssECI CCNNGG 7 cut(s) 129, 344, 450, 1085, 1263, 1341, 1407
BssT1I CCWWGG 4 cut(s) 129, 450, 1085, 1341
Bst2UI CCWGG 3 cut(s) 345, 426, 939
Bst4CI ACNGT 3 cut(s) 242, 280, 1775
Bst6I CTCTTC 3 cut(s) 1217, 1457, 1577
BstAPI GCANNNNNTGC 1 cut(s) 1722
BstBI TTCGAA 1 cut(s) 730
BstC8I GCNNGC 3 cut(s) 669, 1904, 2159
BstDSI CCRYGG 1 cut(s) 129
BstENI CCTNNNNNAGG 1 cut(s) 740
BstF5I GGATG 9 cut(s) 178, 229, 253, 934, 1417, 1441, 1678, 1985, 2173
BstHHI GCGC 1 cut(s) 311
BstMAI GTCTC 2 cut(s) 119, 525
BstMWI GCNNNNNNNGC 6 cut(s) 677, 905, 914, 939, 1154, 1722
BstNI CCWGG 3 cut(s) 345, 426, 939
BstNSI RCATGY 2 cut(s) 671, 871
BstSCI CCNGG 3 cut(s) 343, 424, 937
BstSFI CTRYAG 6 cut(s) 312, 951, 1149, 1319, 1651, 1723
BstV1I GCAGC 8 cut(s) 298, 886, 929, 1135, 1220, 1340, 1815, 2197
BstV2I GAAGAC 1 cut(s) 285
BstX2I RGATCY 4 cut(s) 635, 1135, 1192, 1918
BstYI RGATCY 4 cut(s) 635, 1135, 1192, 1918
Bsu36I CCTNAGG 1 cut(s) 561
BsuRI GGCC 5 cut(s) 917, 933, 1268, 1795, 2135
BtgI CCRYGG 1 cut(s) 129
BtgZI GCGATG 1 cut(s) 201
BtsCI GGATG 9 cut(s) 178, 229, 253, 934, 1417, 1441, 1678, 1985, 2173
BtsIMutI CAGTG 2 cut(s) 247, 1965
BveI ACCTGC 2 cut(s) 1028, 1085
Cac8I GCNNGC 3 cut(s) 669, 1904, 2159
CaiI CAGNNNCTG 2 cut(s) 431, 758
CciI TCATGA 1 cut(s) 2002
CfoI GCGC 1 cut(s) 311
Cfr10I RCCGGY 1 cut(s) 1846
Cfr13I GGNCC 2 cut(s) 931, 1404
Csp6I GTAC 4 cut(s) 1082, 1935, 1944, 2198
CspAI ACCGGT 1 cut(s) 1846
CviAII CATG 6 cut(s) 130, 668, 868, 1487, 2003, 2022
CviQI GTAC 4 cut(s) 1082, 1935, 1944, 2198
DraI TTTAAA 1 cut(s) 1473
DrdI GACNNNNNNGTC 2 cut(s) 1375, 1562
DriI GACNNNNNGTC 1 cut(s) 2075
DseDI GACNNNNNNGTC 2 cut(s) 1375, 1562
Eam1104I CTCTTC 3 cut(s) 1217, 1457, 1577
Eam1105I GACNNNNNGTC 1 cut(s) 2075
EarI CTCTTC 3 cut(s) 1217, 1457, 1577
Ecl136II GAGCTC 1 cut(s) 1730
Eco130I CCWWGG 4 cut(s) 129, 450, 1085, 1341
Eco147I AGGCCT 1 cut(s) 917
Eco24I GRGCYC 2 cut(s) 117, 1732
Eco31I GGTCTC 2 cut(s) 119, 525
Eco32I GATATC 1 cut(s) 2176
Eco47I GGWCC 1 cut(s) 1404
Eco53kI GAGCTC 1 cut(s) 1730
Eco57I CTGAAG 1 cut(s) 780
Eco81I CCTNAGG 1 cut(s) 561
EcoICRI GAGCTC 1 cut(s) 1730
EcoNI CCTNNNNNAGG 1 cut(s) 740
EcoRII CCWGG 3 cut(s) 343, 424, 937
EcoRV GATATC 1 cut(s) 2176
EcoT14I CCWWGG 4 cut(s) 129, 450, 1085, 1341
EcoT22I ATGCAT 1 cut(s) 793
EcoT38I GRGCYC 2 cut(s) 117, 1732
ErhI CCWWGG 4 cut(s) 129, 450, 1085, 1341
FaeI CATG 6 cut(s) 133, 671, 871, 1490, 2006, 2025
FalI AAGNNNNNCTT 2 cut(s) 219, 251
FaqI GGGAC 3 cut(s) 499, 1927, 2063
FatI CATG 6 cut(s) 129, 667, 867, 1486, 2002, 2021
FauI CCCGC 1 cut(s) 1810
FauNDI CATATG 1 cut(s) 925
FbaI TGATCA 1 cut(s) 82
Fnu4HI GCNGC 9 cut(s) 312, 900, 943, 1149, 1206, 1209, 1329, 1804, 2186
FokI GGATG 9 cut(s) 185, 236, 260, 921, 1424, 1448, 1665, 1972, 2180
FriOI GRGCYC 2 cut(s) 117, 1732
Fsp4HI GCNGC 9 cut(s) 312, 900, 943, 1149, 1206, 1209, 1329, 1804, 2186
FspBI CTAG 5 cut(s) 840, 1077, 1664, 1907, 2072
GlaI GCGC 1 cut(s) 310
GluI GCNGC 9 cut(s) 312, 900, 943, 1149, 1206, 1209, 1329, 1804, 2186
GsuI CTGGAG 2 cut(s) 408, 812
HaeIII GGCC 5 cut(s) 917, 933, 1268, 1795, 2135
HapII CCGG 1 cut(s) 1847
HhaI GCGC 1 cut(s) 311
Hin1II CATG 6 cut(s) 133, 671, 871, 1490, 2006, 2025
Hin6I GCGC 1 cut(s) 309
HinP1I GCGC 1 cut(s) 309
HincII GTYRAC 3 cut(s) 331, 865, 1380
HindII GTYRAC 3 cut(s) 331, 865, 1380
HpaII CCGG 1 cut(s) 1847
HphI GGTGA 3 cut(s) 38, 710, 2037
Hpy166II GTNNAC 4 cut(s) 331, 865, 1057, 1380
Hpy188III TCNNGA 9 cut(s) 338, 560, 966, 1139, 1196, 1306, 1356, 1398, 2003
Hpy8I GTNNAC 4 cut(s) 331, 865, 1057, 1380
Hpy99I CGWCG 1 cut(s) 407
HpyAV CCTTC 6 cut(s) 755, 842, 1395, 1546, 1749, 2112
HpyCH4III ACNGT 3 cut(s) 242, 280, 1775
HpyCH4IV ACGT 4 cut(s) 327, 395, 1382, 2200
HpyF10VI GCNNNNNNNGC 6 cut(s) 677, 905, 914, 939, 1154, 1722
HpySE526I ACGT 4 cut(s) 327, 395, 1382, 2200
Hsp92II CATG 6 cut(s) 133, 671, 871, 1490, 2006, 2025
HspAI GCGC 1 cut(s) 309
Ksp22I TGATCA 1 cut(s) 82
LmnI GCTCC 5 cut(s) 572, 720, 851, 1076, 1735
Lsp1109I GCAGC 8 cut(s) 298, 886, 929, 1135, 1220, 1340, 1815, 2197
LweI GCATC 4 cut(s) 667, 800, 1582, 2079
MaeI CTAG 5 cut(s) 840, 1077, 1664, 1907, 2072
MaeII ACGT 4 cut(s) 327, 395, 1382, 2200
MaeIII GTNAC 5 cut(s) 274, 391, 469, 1444, 1564
MbiI CCGCTC 1 cut(s) 1071
MflI RGATCY 4 cut(s) 635, 1135, 1192, 1918
MhlI GDGCHC 4 cut(s) 117, 577, 725, 1732
MluCI AATT 9 cut(s) 98, 286, 616, 726, 894, 1255, 1717, 1889, 2207
MlyI GAGTC 7 cut(s) 326, 481, 788, 1253, 1684, 1862, 2093
Mph1103I ATGCAT 1 cut(s) 793
MroXI GAANNNNTTC 1 cut(s) 1717
MslI CAYNNNNRTG 4 cut(s) 452, 672, 1976, 2166
MspA1I CMGCKG 2 cut(s) 832, 1331
MspI CCGG 1 cut(s) 1847
MspR9I CCNGG 3 cut(s) 345, 426, 939
MvaI CCWGG 3 cut(s) 345, 426, 939
MwoI GCNNNNNNNGC 6 cut(s) 677, 905, 914, 939, 1154, 1722
NcoI CCATGG 1 cut(s) 129
NdeI CATATG 1 cut(s) 925
NlaIII CATG 6 cut(s) 133, 671, 871, 1490, 2006, 2025
NlaIV GGNNCC 5 cut(s) 135, 342, 837, 932, 1879
NmeAIII GCCGAG 1 cut(s) 1288
NmuCI GTSAC 3 cut(s) 274, 391, 1564
NsiI ATGCAT 1 cut(s) 793
NspI RCATGY 2 cut(s) 671, 871
NspV TTCGAA 1 cut(s) 730
OliI CACNNNNGTG 1 cut(s) 452
PaeI GCATGC 1 cut(s) 671
PagI TCATGA 1 cut(s) 2002
PaqCI CACCTGC 1 cut(s) 1085
PceI AGGCCT 1 cut(s) 917
PciI ACATGT 1 cut(s) 867
PcsI WCGNNNNNNNCGW 1 cut(s) 1708
PdmI GAANNNNTTC 1 cut(s) 1717
PfeI GAWTC 5 cut(s) 35, 353, 602, 755, 1289
PflMI CCANNNNNTGG 2 cut(s) 169, 2164
PfoI TCCNGGA 1 cut(s) 424
PinAI ACCGGT 1 cut(s) 1846
PkrI GCNGC 9 cut(s) 313, 901, 944, 1150, 1207, 1210, 1330, 1805, 2187
PleI GAGTC 7 cut(s) 326, 481, 787, 1252, 1683, 1862, 2092
PpsI GAGTC 7 cut(s) 326, 481, 787, 1252, 1683, 1862, 2092
PscI ACATGT 1 cut(s) 867
PshBI ATTAAT 1 cut(s) 149
Psp124BI GAGCTC 1 cut(s) 1732
Psp6I CCWGG 3 cut(s) 343, 424, 937
PspGI CCWGG 3 cut(s) 343, 424, 937
PspN4I GGNNCC 5 cut(s) 135, 342, 837, 932, 1879
PspPI GGNCC 2 cut(s) 931, 1404
PstI CTGCAG 4 cut(s) 316, 955, 1153, 1727
PstNI CAGNNNCTG 2 cut(s) 431, 758
PsuI RGATCY 4 cut(s) 635, 1135, 1192, 1918
PvuII CAGCTG 2 cut(s) 832, 1331
RsaI GTAC 4 cut(s) 1083, 1936, 1945, 2199
RsaNI GTAC 4 cut(s) 1082, 1935, 1944, 2198
RseI CAYNNNNRTG 4 cut(s) 452, 672, 1976, 2166
SacI GAGCTC 1 cut(s) 1732
SatI GCNGC 9 cut(s) 312, 900, 943, 1149, 1206, 1209, 1329, 1804, 2186
Sau96I GGNCC 2 cut(s) 931, 1404
SchI GAGTC 7 cut(s) 326, 481, 788, 1253, 1684, 1862, 2093
ScrFI CCNGG 3 cut(s) 345, 426, 939
SduI GDGCHC 4 cut(s) 117, 577, 725, 1732
SfaNI GCATC 4 cut(s) 667, 800, 1582, 2079
SfcI CTRYAG 6 cut(s) 312, 951, 1149, 1319, 1651, 1723
SfuI TTCGAA 1 cut(s) 730
SgrAI CRCCGGYG 1 cut(s) 1846
SinI GGWCC 1 cut(s) 1404
SmiMI CAYNNNNRTG 4 cut(s) 452, 672, 1976, 2166
SphI GCATGC 1 cut(s) 671
Sse9I AATT 9 cut(s) 98, 286, 616, 726, 894, 1255, 1717, 1889, 2207
SseBI AGGCCT 1 cut(s) 917
SsiI CCGC 3 cut(s) 1069, 1205, 1817
SspMI CTAG 5 cut(s) 840, 1077, 1664, 1907, 2072
SstI GAGCTC 1 cut(s) 1732
StuI AGGCCT 1 cut(s) 917
StyD4I CCNGG 3 cut(s) 343, 424, 937
StyI CCWWGG 4 cut(s) 129, 450, 1085, 1341
TaaI ACNGT 3 cut(s) 242, 280, 1775
TaiI ACGT 4 cut(s) 330, 398, 1385, 2203
TaqI TCGA 4 cut(s) 301, 730, 1711, 2087
TaqII GACCGA 1 cut(s) 1421
TasI AATT 9 cut(s) 98, 286, 616, 726, 894, 1255, 1717, 1889, 2207
TatI WGTACW 1 cut(s) 1943
TauI GCSGC 1 cut(s) 1208
TfiI GAWTC 5 cut(s) 35, 353, 602, 755, 1289
TscAI CASTG 2 cut(s) 247, 1972
TseFI GTSAC 3 cut(s) 274, 391, 1564
TseI GCWGC 8 cut(s) 311, 899, 942, 1148, 1208, 1328, 1803, 2185
Tsp45I GTSAC 3 cut(s) 274, 391, 1564
TspDTI ATGAA 9 cut(s) 90, 240, 543, 1092, 1149, 1503, 1611, 2019, 2069
TspGWI ACGGA 2 cut(s) 1890, 1952
TspRI CASTG 2 cut(s) 247, 1972
Van91I CCANNNNNTGG 2 cut(s) 169, 2164
VpaK11BI GGWCC 1 cut(s) 1404
VspI ATTAAT 1 cut(s) 149
XagI CCTNNNNNAGG 1 cut(s) 740
XapI RAATTY 3 cut(s) 98, 286, 2207
XceI RCATGY 2 cut(s) 671, 871
XcmI CCANNNNNNNNNTGG 2 cut(s) 170, 2100
XmnI GAANNNNTTC 1 cut(s) 1717
XspI CTAG 5 cut(s) 840, 1077, 1664, 1907, 2072
Zsp2I ATGCAT 1 cut(s) 793
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.