Rh6DG340500

breast cancer carboxy-terminal domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
OG0011125
Physical Location & Seq
Reverse (-)
54382753 .. 54386775
4023 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG340500.1

Sequence Viewer

Length: 2118 bp
ATGGAATCATCTTTGGTTAATCCTGAGGGCAAGGAGAGATCTGGTGTTGCAAGGAAAGAGAAAGTCAGGCATGCTAATGATACAAAATGTATTAGCTCAGGTGATGGGAGCAAAAAAGAGAGGAGCATAATTCGAAACCTCCATAAGGAAATCACAGAATCTGAAGGCAAGATTGAAAACGAGTCTGTCAATGCATCAGAAGATTATTTATATGCAAAACCAACAGAACTCCAGCTGGAACCTAGTGAGGAAGGAGGAAATATAGTTGACATGTTTGATATTGGTTTTAACACTCAAATTGCTGCCGAAGCTATGGAGGCCTTAGCATATGGGGGCCATCCTGGCTGCAATACTGCGGATGTTGGTTCAGGAGGTGCTAAAGAGAATACAGCTTCTTTGGAACATCGCTCTCCTCAAAAGAGTGATTTTTCTAATGTAGCAGGTATTAGCACAAATGTAAACCGAAGAAACCGCTCCACTAGAGTACCAAGGAGAGCAGGTGCTTCATCTCAAAAACAATCTAAGAAGCAAGAGTTAGATCCTGATTTGGCGGCAGTAACAAATGTGAAGAGAAGCAGATTTTTTGGTGAGTCTTGTAGTAATTTTGCCGAGGCCAACGATAGTTTATGTATAGAATCTCCCAAGTCTGTCAAGAATAGGAAGCTACAGAGTGCAGCTGATTATTCCAAGGTTTCTTCTTCTGGAAAACACCAGACTACCCAGTCAACGTCAGGGGGTAGGTCAAGAAGGACCGAGGATGGATCAAACAATGGTGTGGGGGATGGTATTGTTACATACAGAAGAAAGAAGAGATGTTTAAAAGCTCAATCACCTGAAATGATCAGTAGTTCTGAGGCTGGATCAGACGAGCCAGTAGAAAAGAAGAACAATGTTAAGAAGGACGACATTGTCACATACAGGAGAAAGAGAATAGGTGCAAAAGAAAGTCGTTCAGTTTATGTTTCATCGGAGGGAAATAGTAGCAGAGAAGCCTGTAGCTTAAAACTAGGTCTATGGAGTCATCCCAAAGGGAAAAGAACAGGTCGCAATGCTCGAAGCAATTCCTGCAGAGTTCCTGTTCCTTCTACTCCATTTCCACTACTTGACAAAAAGGACAGTTCCCATTCTGATGAAAGGCCAGAAAGCAGCAACAATATGGCGGGGAAAGAACAATCATCATATTGCCCACCGGTGCTTTCCTTAGATAACAACTCTGACAGAACCTTGTTTGAATTGCAATCTGGCGAGCTAGTTGGGACAGATCCTACATCTTCTGGTACGGAATGTACTGCGCCATCTAACTCTACCACTGGCATAAATGTGGGATCATCCAAATATGTATCTCATGACTATCACAAAAAGCCATGCAACAAAAACTTACCCAAATCATCTCTTATGAAAGAGCTTATTGGACTAGGTGTCCCTGAGTCGATGCCAGATTTTGCTTGGAAAGATTTGAGAAGGCGAAGAAGTATGGCCTATGTTCAAGTTCTGTTTAGCCAGCATTTGGATGATGATATCATTAAGCAGCAGAAAAAGATCATTGCACGACTGGGCCTATCCGTTGCTTCATGTTCTATGGATGCAACACACTTTATAGCAGATCAATTTGCACGTACAAGGAATATGTTGGAATTCATTGCTCTTGGTAAACCAGTGGTAACACATTTGTGGCTTGAGAGTTGTGGGGAAGCAAACTGTTTGATTAGTGAGAAAAGCTATATTCTGAGGGATGCCAAAAAGGAAAAGGAAATTGGTTTTAGCATGCTTGTTTCACTGGACTGTGCAAAACGGTGTCCGCTTCTAAAGGGTCAAAAAGTCTTCATTACTCCGAACATAAAACCTGGAAAAGAAATGATGACCAGCTTGGTGAAGACAGCTCAGGGCGAGCCAGTGGAGAAAGCTCAGATATCTGCCGCAAAGGGTAAAAAGATTTTCAATGAATTATTGATTCTTTCTTGTGAAGAAGATGAAGCAATCTGTCTACCTTTCCTTGAGAAAGGTGCAGCAGTTTACAGTTCAGAACTTTTACTAAATGGTATAGTTATCCAGAGACTGGAATACAAGAGACATCAGCTCTTCACCAATGTTGTCAAGAAAGATCGGCCTTCCACATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RTT107_BRCT_5

Protein Analysis

705

Amino Acids

77.5

Weight (kDa)

9.09

Isoelectric Point (pI)

58.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BRCT_2 PF16589 600 - 688 2e-16 BRCT domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011125)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G03130 AT4G03130 AT4G03130 AT4G03130
fragaria_vesca FvH4_2g24660
malus_domestica MD11G1297400.v1.1 MD11G1297500.v1.1
prunus_persica Prupe.8G251900_v2.0.a1 Prupe.8G251900_v2.0.a1
pyrus_communis pycom11g26140
rosa_chinensis RchiOBHm_Chr6g0292491
rosa_laevigata RLG00000012019
rosa_multiflora Rmu_sc0001354.1_g000027
rosa_roxburghii Rroxscaffold_7G00175010
rosa_rugosa Rorug06G0227200
rosa_samantha Rh6AG340400 Rh6BG347700 Rh6CG354700 Rh6DG340500
rosa_wichuraiana Rw6G029640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 488
AasI GACNNNNNNGTC 2 cut(s) 721, 908
Acc36I ACCTGC 2 cut(s) 431, 488
AccB7I CCANNNNNTGG 2 cut(s) 1507, 2056
AccBSI CCGCTC 1 cut(s) 474
AccI GTMKAC 1 cut(s) 1984
AciI CCGC 6 cut(s) 356, 472, 551, 1160, 1799, 1917
AclWI GGATC 5 cut(s) 533, 769, 868, 1256, 1333
AcsI RAATTY 1 cut(s) 1634
AcuI CTGAAG 1 cut(s) 183
AfaI GTAC 4 cut(s) 486, 1279, 1288, 1618
AfiI CCNNNNNNNGG 3 cut(s) 145, 1507, 2056
AflIII ACRYGT 1 cut(s) 270
AgeI ACCGGT 1 cut(s) 1189
AgsI TTSAA 4 cut(s) 176, 1232, 1487, 1939
AhdI GACNNNNNGTC 1 cut(s) 1418
AjnI CCWGG 2 cut(s) 340, 1843
AjuI GAANNNNNNNTTGG 2 cut(s) 1737, 1769
AleI CACNNNNGTG 1 cut(s) 1669
Alw26I GTCTC 2 cut(s) 2047, 2062
AlwI GGATC 5 cut(s) 533, 769, 868, 1256, 1333
AlwNI CAGNNNCTG 2 cut(s) 161, 2056
AoxI GGCC 7 cut(s) 318, 334, 612, 1136, 1476, 1555, 2105
ApeKI GCWGC 6 cut(s) 302, 345, 674, 1146, 1528, 2006
ApoI RAATTY 1 cut(s) 1634
AsiGI ACCGGT 1 cut(s) 1189
Asp700I GAANNNNTTC 1 cut(s) 1060
AspLEI GCGC 1 cut(s) 1294
AspS9I GGNCC 3 cut(s) 334, 750, 1555
AsuHPI GGTGA 5 cut(s) 113, 599, 822, 1882, 2074
AsuII TTCGAA 1 cut(s) 133
AvaII GGWCC 1 cut(s) 750
AxyI CCTNAGG 1 cut(s) 24
BaeI ACNNNNGTAYC 2 cut(s) 468, 501
BbsI GAAGAC 2 cut(s) 1813, 1880
BbvI GCAGC 6 cut(s) 289, 332, 686, 1158, 1540, 2018
BccI CCATC 5 cut(s) 98, 345, 752, 776, 1303
BciT130I CCWGG 2 cut(s) 342, 1845
BclI TGATCA 1 cut(s) 840
BcoDI GTCTC 2 cut(s) 2047, 2062
BfaI CTAG 5 cut(s) 243, 480, 1007, 1250, 1415
BfmI CTRYAG 3 cut(s) 665, 994, 1066
BfuAI ACCTGC 2 cut(s) 431, 488
BglI GCCNNNNNGGC 1 cut(s) 342
BglII AGATCT 1 cut(s) 38
BisI GCNGC 8 cut(s) 303, 346, 552, 675, 1147, 1529, 1917, 2007
BlsI GCNGC 8 cut(s) 304, 347, 553, 676, 1148, 1530, 1918, 2008
Bme1390I CCNGG 2 cut(s) 342, 1845
Bme18I GGWCC 1 cut(s) 750
BmeRI GACNNNNNGTC 1 cut(s) 1418
BmgT120I GGNCC 3 cut(s) 334, 750, 1555
BmiI GGNNCC 2 cut(s) 240, 335
BmrFI CCNGG 2 cut(s) 342, 1845
BmrI ACTGGG 2 cut(s) 715, 1562
BmsI GCATC 4 cut(s) 203, 1422, 1573, 1723
BmuI ACTGGG 2 cut(s) 715, 1562
BpiI GAAGAC 2 cut(s) 1813, 1880
BpmI CTGGAG 1 cut(s) 215
Bpu10I CCTNAGC 3 cut(s) 97, 322, 1881
Bpu14I TTCGAA 1 cut(s) 133
BpuEI CTTGAG 2 cut(s) 1697, 2015
BsaAI YACGTR 1 cut(s) 1616
BsaJI CCNNGG 4 cut(s) 488, 609, 687, 753
BsaWI WCCGGW 1 cut(s) 1189
BsaXI ACNNNNNCTCC 2 cut(s) 484, 514
Bsc4I CCNNNNNNNGG 3 cut(s) 145, 1507, 2056
Bse118I RCCGGY 1 cut(s) 1189
Bse1I ACTGG 8 cut(s) 721, 872, 1315, 1557, 1655, 1782, 1892, 2061
Bse21I CCTNAGG 1 cut(s) 24
Bse3DI GCAATG 3 cut(s) 1054, 1542, 1638
BseBI CCWGG 2 cut(s) 342, 1845
BseDI CCNNGG 4 cut(s) 488, 609, 687, 753
BseGI GGATG 9 cut(s) 337, 364, 763, 787, 1021, 1328, 1516, 1588, 1738
BseLI CCNNNNNNNGG 3 cut(s) 145, 1507, 2056
BseMI GCAATG 3 cut(s) 1054, 1542, 1638
BseMII CTCAG 7 cut(s) 15, 111, 843, 1416, 1718, 1895, 1919
BseNI ACTGG 8 cut(s) 721, 872, 1315, 1557, 1655, 1782, 1892, 2061
BseRI GAGGAG 2 cut(s) 136, 402
BseXI GCAGC 6 cut(s) 289, 332, 686, 1158, 1540, 2018
BsgI GTGCAG 2 cut(s) 693, 2025
BshFI GGCC 7 cut(s) 320, 336, 614, 1138, 1478, 1557, 2107
BshTI ACCGGT 1 cut(s) 1189
BsiSI CCGG 1 cut(s) 1190
BslFI GGGAC 2 cut(s) 1270, 1406
BslI CCNNNNNNNGG 3 cut(s) 145, 1507, 2056
BsmAI GTCTC 2 cut(s) 2047, 2062
BsmFI GGGAC 2 cut(s) 1270, 1406
BsnI GGCC 7 cut(s) 320, 336, 614, 1138, 1478, 1557, 2107
Bsp119I TTCGAA 1 cut(s) 133
BspACI CCGC 6 cut(s) 356, 472, 551, 1160, 1799, 1917
BspANI GGCC 7 cut(s) 320, 336, 614, 1138, 1478, 1557, 2107
BspCNI CTCAG 7 cut(s) 16, 110, 844, 1417, 1719, 1894, 1918
BspHI TCATGA 1 cut(s) 1345
BspLI GGNNCC 2 cut(s) 240, 335
BspMAI CTGCAG 1 cut(s) 1070
BspMI ACCTGC 2 cut(s) 431, 488
BspPI GGATC 5 cut(s) 533, 769, 868, 1256, 1333
BspQI GCTCTTC 1 cut(s) 2084
BspT104I TTCGAA 1 cut(s) 133
BsrBI CCGCTC 1 cut(s) 474
BsrDI GCAATG 3 cut(s) 1054, 1542, 1638
BsrFI RCCGGY 1 cut(s) 1189
BsrI ACTGG 8 cut(s) 721, 872, 1315, 1557, 1655, 1782, 1892, 2061
BssAI RCCGGY 1 cut(s) 1189
BssECI CCNNGG 4 cut(s) 488, 609, 687, 753
BssT1I CCWWGG 2 cut(s) 488, 687
Bst2UI CCWGG 2 cut(s) 342, 1845
Bst4CI ACNGT 5 cut(s) 1118, 1700, 1784, 1794, 2018
Bst6I CTCTTC 3 cut(s) 563, 803, 2084
BstAPI GCANNNNNTGC 1 cut(s) 1065
BstBAI YACGTR 1 cut(s) 1616
BstBI TTCGAA 1 cut(s) 133
BstC8I GCNNGC 5 cut(s) 72, 1247, 1502, 1766, 1889
BstENI CCTNNNNNAGG 1 cut(s) 143
BstF5I GGATG 9 cut(s) 337, 364, 763, 787, 1021, 1328, 1516, 1588, 1738
BstHHI GCGC 1 cut(s) 1294
BstMAI GTCTC 2 cut(s) 2047, 2062
BstMWI GCNNNNNNNGC 4 cut(s) 308, 317, 342, 1065
BstNI CCWGG 2 cut(s) 342, 1845
BstNSI RCATGY 3 cut(s) 74, 274, 1768
BstSCI CCNGG 2 cut(s) 340, 1843
BstSFI CTRYAG 3 cut(s) 665, 994, 1066
BstV1I GCAGC 6 cut(s) 289, 332, 686, 1158, 1540, 2018
BstV2I GAAGAC 2 cut(s) 1813, 1880
BstX2I RGATCY 3 cut(s) 38, 538, 1261
BstYI RGATCY 3 cut(s) 38, 538, 1261
Bsu36I CCTNAGG 1 cut(s) 24
BsuRI GGCC 7 cut(s) 320, 336, 614, 1138, 1478, 1557, 2107
BtgZI GCGATG 1 cut(s) 389
BtsCI GGATG 9 cut(s) 337, 364, 763, 787, 1021, 1328, 1516, 1588, 1738
BtsIMutI CAGTG 4 cut(s) 1308, 1662, 1775, 1899
BveI ACCTGC 2 cut(s) 431, 488
Cac8I GCNNGC 5 cut(s) 72, 1247, 1502, 1766, 1889
CaiI CAGNNNCTG 2 cut(s) 161, 2056
CciI TCATGA 1 cut(s) 1345
CfoI GCGC 1 cut(s) 1294
Cfr10I RCCGGY 1 cut(s) 1189
Cfr13I GGNCC 3 cut(s) 334, 750, 1555
Csp6I GTAC 4 cut(s) 485, 1278, 1287, 1617
CspAI ACCGGT 1 cut(s) 1189
CviAII CATG 6 cut(s) 71, 271, 1346, 1365, 1572, 1765
CviQI GTAC 4 cut(s) 485, 1278, 1287, 1617
DraI TTTAAA 1 cut(s) 819
DrdI GACNNNNNNGTC 2 cut(s) 721, 908
DriI GACNNNNNGTC 1 cut(s) 1418
DseDI GACNNNNNNGTC 2 cut(s) 721, 908
Eam1104I CTCTTC 3 cut(s) 563, 803, 2084
Eam1105I GACNNNNNGTC 1 cut(s) 1418
EarI CTCTTC 3 cut(s) 563, 803, 2084
Eco130I CCWWGG 2 cut(s) 488, 687
Eco147I AGGCCT 1 cut(s) 320
Eco32I GATATC 2 cut(s) 1519, 1911
Eco47I GGWCC 1 cut(s) 750
Eco57I CTGAAG 1 cut(s) 183
Eco81I CCTNAGG 1 cut(s) 24
EcoNI CCTNNNNNAGG 1 cut(s) 143
EcoRI GAATTC 1 cut(s) 1634
EcoRII CCWGG 2 cut(s) 340, 1843
EcoRV GATATC 2 cut(s) 1519, 1911
EcoT14I CCWWGG 2 cut(s) 488, 687
EcoT22I ATGCAT 1 cut(s) 196
ErhI CCWWGG 2 cut(s) 488, 687
FaeI CATG 6 cut(s) 74, 274, 1349, 1368, 1575, 1768
FaqI GGGAC 2 cut(s) 1270, 1406
FatI CATG 6 cut(s) 70, 270, 1345, 1364, 1571, 1764
FauI CCCGC 1 cut(s) 1153
FauNDI CATATG 1 cut(s) 328
FbaI TGATCA 1 cut(s) 840
FblI GTMKAC 1 cut(s) 1984
Fnu4HI GCNGC 8 cut(s) 303, 346, 552, 675, 1147, 1529, 1917, 2007
FokI GGATG 9 cut(s) 324, 371, 770, 794, 1008, 1315, 1523, 1595, 1745
Fsp4HI GCNGC 8 cut(s) 303, 346, 552, 675, 1147, 1529, 1917, 2007
FspBI CTAG 5 cut(s) 243, 480, 1007, 1250, 1415
GlaI GCGC 1 cut(s) 1293
GluI GCNGC 8 cut(s) 303, 346, 552, 675, 1147, 1529, 1917, 2007
GsuI CTGGAG 1 cut(s) 215
HaeIII GGCC 7 cut(s) 320, 336, 614, 1138, 1478, 1557, 2107
HapII CCGG 1 cut(s) 1190
HhaI GCGC 1 cut(s) 1294
Hin1II CATG 6 cut(s) 74, 274, 1349, 1368, 1575, 1768
Hin6I GCGC 1 cut(s) 1292
HinP1I GCGC 1 cut(s) 1292
HincII GTYRAC 2 cut(s) 268, 726
HindII GTYRAC 2 cut(s) 268, 726
HinfI GANTC 8 cut(s) 5, 158, 182, 590, 635, 1018, 1427, 1951
HpaII CCGG 1 cut(s) 1190
HphI GGTGA 5 cut(s) 113, 599, 822, 1882, 2074
Hpy166II GTNNAC 6 cut(s) 268, 460, 726, 1652, 1985, 2014
Hpy188III TCNNGA 9 cut(s) 23, 369, 542, 652, 702, 744, 1346, 2050, 2095
Hpy8I GTNNAC 6 cut(s) 268, 460, 726, 1652, 1985, 2014
HpyAV CCTTC 7 cut(s) 158, 245, 741, 892, 1092, 1455, 2118
HpyCH4III ACNGT 5 cut(s) 1118, 1700, 1784, 1794, 2018
HpyCH4IV ACGT 2 cut(s) 728, 1615
HpyF10VI GCNNNNNNNGC 4 cut(s) 308, 317, 342, 1065
HpySE526I ACGT 2 cut(s) 728, 1615
Hsp92II CATG 6 cut(s) 74, 274, 1349, 1368, 1575, 1768
HspAI GCGC 1 cut(s) 1292
Ksp22I TGATCA 1 cut(s) 840
LguI GCTCTTC 1 cut(s) 2084
LmnI GCTCC 3 cut(s) 108, 123, 479
Lsp1109I GCAGC 6 cut(s) 289, 332, 686, 1158, 1540, 2018
LweI GCATC 4 cut(s) 203, 1422, 1573, 1723
MaeI CTAG 5 cut(s) 243, 480, 1007, 1250, 1415
MaeII ACGT 2 cut(s) 728, 1615
MaeIII GTNAC 4 cut(s) 556, 790, 910, 1660
MbiI CCGCTC 1 cut(s) 474
MflI RGATCY 3 cut(s) 38, 538, 1261
MluCI AATT 9 cut(s) 129, 297, 601, 1060, 1232, 1607, 1634, 1752, 1943
MlyI GAGTC 4 cut(s) 191, 599, 1027, 1436
MmeI TCCRAC 1 cut(s) 1611
Mph1103I ATGCAT 1 cut(s) 196
MroXI GAANNNNTTC 1 cut(s) 1060
MseI TTAA 6 cut(s) 18, 288, 818, 894, 1001, 1524
MslI CAYNNNNRTG 5 cut(s) 75, 1128, 1319, 1509, 1669
MspA1I CMGCKG 2 cut(s) 235, 677
MspI CCGG 1 cut(s) 1190
MspR9I CCNGG 2 cut(s) 342, 1845
MvaI CCWGG 2 cut(s) 342, 1845
MwoI GCNNNNNNNGC 4 cut(s) 308, 317, 342, 1065
NdeI CATATG 1 cut(s) 328
NlaIII CATG 6 cut(s) 74, 274, 1349, 1368, 1575, 1768
NlaIV GGNNCC 2 cut(s) 240, 335
NmeAIII GCCGAG 1 cut(s) 634
NmuCI GTSAC 1 cut(s) 910
NsiI ATGCAT 1 cut(s) 196
NspI RCATGY 3 cut(s) 74, 274, 1768
NspV TTCGAA 1 cut(s) 133
OliI CACNNNNGTG 1 cut(s) 1669
PaeI GCATGC 2 cut(s) 74, 1768
PagI TCATGA 1 cut(s) 1345
PaqCI CACCTGC 1 cut(s) 488
PceI AGGCCT 1 cut(s) 320
PciI ACATGT 1 cut(s) 270
PciSI GCTCTTC 1 cut(s) 2084
PcsI WCGNNNNNNNCGW 1 cut(s) 1051
PdmI GAANNNNTTC 1 cut(s) 1060
PfeI GAWTC 4 cut(s) 5, 158, 635, 1951
PflFI GACNNNGTC 1 cut(s) 908
PflMI CCANNNNNTGG 2 cut(s) 1507, 2056
PinAI ACCGGT 1 cut(s) 1189
PkrI GCNGC 8 cut(s) 304, 347, 553, 676, 1148, 1530, 1918, 2008
PleI GAGTC 4 cut(s) 190, 598, 1026, 1435
PpsI GAGTC 4 cut(s) 190, 598, 1026, 1435
Ppu21I YACGTR 1 cut(s) 1616
PscI ACATGT 1 cut(s) 270
Psp6I CCWGG 2 cut(s) 340, 1843
PspGI CCWGG 2 cut(s) 340, 1843
PspN4I GGNNCC 2 cut(s) 240, 335
PspPI GGNCC 3 cut(s) 334, 750, 1555
PstI CTGCAG 1 cut(s) 1070
PstNI CAGNNNCTG 2 cut(s) 161, 2056
PsuI RGATCY 3 cut(s) 38, 538, 1261
PsyI GACNNNGTC 1 cut(s) 908
PvuII CAGCTG 2 cut(s) 235, 677
RsaI GTAC 4 cut(s) 486, 1279, 1288, 1618
RsaNI GTAC 4 cut(s) 485, 1278, 1287, 1617
RseI CAYNNNNRTG 5 cut(s) 75, 1128, 1319, 1509, 1669
SapI GCTCTTC 1 cut(s) 2084
SaqAI TTAA 6 cut(s) 18, 288, 818, 894, 1001, 1524
SatI GCNGC 8 cut(s) 303, 346, 552, 675, 1147, 1529, 1917, 2007
Sau96I GGNCC 3 cut(s) 334, 750, 1555
SchI GAGTC 4 cut(s) 191, 599, 1027, 1436
ScrFI CCNGG 2 cut(s) 342, 1845
SfaNI GCATC 4 cut(s) 203, 1422, 1573, 1723
SfcI CTRYAG 3 cut(s) 665, 994, 1066
SfuI TTCGAA 1 cut(s) 133
SgrAI CRCCGGYG 1 cut(s) 1189
SinI GGWCC 1 cut(s) 750
SmiMI CAYNNNNRTG 5 cut(s) 75, 1128, 1319, 1509, 1669
SmlI CTYRAG 2 cut(s) 1676, 1994
SmoI CTYRAG 2 cut(s) 1676, 1994
SphI GCATGC 2 cut(s) 74, 1768
Sse9I AATT 9 cut(s) 129, 297, 601, 1060, 1232, 1607, 1634, 1752, 1943
SseBI AGGCCT 1 cut(s) 320
SsiI CCGC 6 cut(s) 356, 472, 551, 1160, 1799, 1917
SspMI CTAG 5 cut(s) 243, 480, 1007, 1250, 1415
StuI AGGCCT 1 cut(s) 320
StyD4I CCNGG 2 cut(s) 340, 1843
StyI CCWWGG 2 cut(s) 488, 687
TaaI ACNGT 5 cut(s) 1118, 1700, 1784, 1794, 2018
TaiI ACGT 2 cut(s) 731, 1618
TaqI TCGA 3 cut(s) 133, 1054, 1430
TaqII GACCGA 1 cut(s) 767
TasI AATT 9 cut(s) 129, 297, 601, 1060, 1232, 1607, 1634, 1752, 1943
TatI WGTACW 1 cut(s) 1286
TauI GCSGC 2 cut(s) 554, 1919
TfiI GAWTC 4 cut(s) 5, 158, 635, 1951
Tru1I TTAA 6 cut(s) 18, 288, 818, 894, 1001, 1524
Tru9I TTAA 6 cut(s) 18, 288, 818, 894, 1001, 1524
TscAI CASTG 4 cut(s) 1315, 1662, 1782, 1899
TseFI GTSAC 1 cut(s) 910
TseI GCWGC 6 cut(s) 302, 345, 674, 1146, 1528, 2006
Tsp45I GTSAC 1 cut(s) 910
TspDTI ATGAA 9 cut(s) 495, 954, 1146, 1412, 1560, 1627, 1813, 1956, 1986
TspGWI ACGGA 2 cut(s) 1295, 1552
TspRI CASTG 4 cut(s) 1315, 1662, 1782, 1899
Tth111I GACNNNGTC 1 cut(s) 908
Van91I CCANNNNNTGG 2 cut(s) 1507, 2056
VpaK11BI GGWCC 1 cut(s) 750
XagI CCTNNNNNAGG 1 cut(s) 143
XapI RAATTY 1 cut(s) 1634
XceI RCATGY 3 cut(s) 74, 274, 1768
XcmI CCANNNNNNNNNTGG 1 cut(s) 1443
XmiI GTMKAC 1 cut(s) 1984
XmnI GAANNNNTTC 1 cut(s) 1060
XspI CTAG 5 cut(s) 243, 480, 1007, 1250, 1415
Zsp2I ATGCAT 1 cut(s) 196
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.