MD11G1297500.v1.1

breast cancer carboxy-terminal domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0011125
Physical Location & Seq
Reverse (-)
41483235 .. 41486562
3328 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1297500.v1.1.491

Sequence Viewer

Length: 2538 bp
ATGGCTGTTTCTCACACCGGGACCCAGAGTTTGGATCTTCTGTCTCACCCATCAGGATATGAACTCAAGGGTGTTGATGAAGTTGATGAACATCAGCAGCAGCTACAATTTCAGGACACCGTGCCTCTTGAAGATGCTTTTGTGCCTGACAGCCTTTCGATGGAGGAAACCCAGTTGGTCGATTTTTCGGATTTTTCCGAAAAGACTAGGACTGGTGTACATGAGTACGAGGAAGAAGTTGTGCTAGACAGTGAGGACGATGAAGTGAATGGAAGCAGAATAGTGAGTGTTAAATCCAATGTGTTGTTGGATCAAAAGCTCGGTCCTCATCGCGAGCAATTCGCTGCAGGACTAGTTTCTCCGATTAATTTTGGTACGACTGAAGGGGAAAAGGATGAAGGATCTCCGCCAATTGCGAGGTTAAATTATATTGACTCTCAGGAACCTGGGGAGTCAGCCCAAGCCAATGCACTTGGTTTTGTGGACCTTTTTGTGTCATTGAACGACGTTTTGGGTGGCTCTCCGAAAATTGATGATCACAAGAAACCGGTTAGGGAGAAATCCCCTCCTGTCTCAAACACAAAGGGGTTTCAAAGGTTGGCTAGGATGAAGTCTCAAGTTGAAATACACAAGGCCTTTGAATGGGTTGATCTTCCTGAGGAGCGATGGGGTGTTGATCTCATTAACAAGGAGATCAATTCGTCTTCTGATTTTCGAGAGTGCAAGCAGGGATCCGTTGTACAGAATCAGAAGGTCAGGCATGGTGGTGGTGACAAAAAATGTATCAGCTTGGGCGGTAAGAGCAAAGAGAAGAAAATAACTCAGGGCCTCCATAAGGAAATAACAGAATCGGAAGGGATGATTGGAAATGAATCTGACAATAAGTCGGAACAACATTTGAATGCGAAATCAACAGGACTGGAGGAGGAAGCTAGTGACGTAAGAACAGATATGGTTGACATGTTTGATGTTGGTTTTAACACTCAAATTGCTGCTGAAGCTATGGAGGCCTTAGCATATGGGGACCTTCCCGACTGCAATTTTGCTGATGCTTATCAAGGTATGGAGAAGACAGCAGATGTTTCACGAGGTGCTCCAGAGAATAAAGCGCTTTTGGAACTTCCTCTTCGAAAGAGTGATGTTCCTGATATAGGAGGCATTAACAAAAATGCAAAGCAAAGAAAGCGTTCAACTAGAACAGTAAGGAGAGTAGCTGCTTCATATCAAAAGCAATCTTCGAGTTGGGAGTTAGATCCTCATTTGGCAGCACAAACAAAAGGGAAAAGAAGCAGATTCTTTTCTGAACATTGTAGTAATTTTGCTGCCGCCAATGGAAATTTTTGTAGACAATCTCCTAAGCATACCAAGCATCGAAAGGTAGAGAGAGCTACTGGAGGTAGGTCAGTAGGGACTGGGGATGAACCTAAGAATCCAGGAGAAAGGGTGAATGATGTTACAGGGGACTGTATTATTAAATACAGAAGAAGGAAGAGACGTTTAAATGCTCATCCATCTGAAATAATCAGTGGGAGTGAGGGCGGATTTAACAAGCGAGTAGAAAGCATGAATAAAGTTACGAAGGGGGATATTATTACATACAAGAGAAAGAAGAGTATCAGCCCCAAAGAAAACTCTTCCAAATCTTGTGTTTCGTCTGAGCGAGATAAAAACAGAACAACCAGTACTTTGAACTTAGAATCATGGAGCCATCCAAAAGGGAAAAGAACACGTCTCAATGCCCGAAGAAATTCTTGCCTAGCTACTTTCCTCTGCACTTCATTTCCAATAGTTGATGGAAAGGACAGCACTTCCCGTTTTGATGAAAGGCCAGAAAGCAACAACAATATAAGGGGAAAGATACACTCATTGGATAAAGATTCTGACAGATCCTTGCTAGCGTTACAATCCAGGAAGCTAGATGCCAGAGATCCTACATCACTGGTAGACATAAAAAGCCATACCTCAGTAGTGTCATCTGGTTCAGAATATACTGCTCAATCTAACTCTACCACTGGCATAAACGTGGGATCATCCAAACATGTGTCTGATGGTCATCACAGAAAGACATACAACAAAAACTTGCCCAAATCGTCCCTTTTGAAAGAGCTTATTGGACTAGGTGTCCCTGAATCAACATCAGATTATGCATGGAAAGACTTAAGAAGGCGAAGAAACATGGCATATGTTCGAGTTCTGTTTAGCCAGCACTTGGAAGATGCTATCATTAAGCAACAGAAAAAGGTCATCGCACGACTGGGCCTATCTGTTGCATCATGTTCTACTGATGCAACACACTTTGTAGCAGATCAATTTGCACGAACAAGGAACATGTTGGAATTCATTGCTCTTGGTAAACCAGTGGTAACTCATTTGTGGCTTGAGAGTTGCGGGCAAGCAAACTGTTTGATTAGTGAGAAAATCTACATTCTGAGGGATGCCAAAAAGGAAAAGGAAATAGGCTTTAGCATGCCTGTTTCACTGGATTGCGCGAAACGGTGTCCACTTCTAAAGGTAATGCATGCGCTTTTGTTCATTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RTT107_BRCT_5

Protein Analysis

846

Amino Acids

93.98

Weight (kDa)

8.59

Isoelectric Point (pI)

48.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011125)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G03130 AT4G03130 AT4G03130 AT4G03130
fragaria_vesca FvH4_2g24660
malus_domestica MD11G1297400.v1.1 MD11G1297500.v1.1
prunus_persica Prupe.8G251900_v2.0.a1 Prupe.8G251900_v2.0.a1
pyrus_communis pycom11g26140
rosa_chinensis RchiOBHm_Chr6g0292491
rosa_laevigata RLG00000012019
rosa_multiflora Rmu_sc0001354.1_g000027
rosa_roxburghii Rroxscaffold_7G00175010
rosa_rugosa Rorug06G0227200
rosa_samantha Rh6AG340400 Rh6BG347700 Rh6CG354700 Rh6DG340500
rosa_wichuraiana Rw6G029640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 2 cut(s) 31, 2209
AccI GTMKAC 2 cut(s) 1345, 1944
AccII CGCG 2 cut(s) 333, 2489
AciI CCGC 5 cut(s) 407, 795, 1326, 1539, 2388
AclWI GGATC 9 cut(s) 42, 318, 409, 726, 739, 1247, 1881, 1922, 2035
AcsI RAATTY 3 cut(s) 1336, 1747, 2336
AcuI CTGAAG 2 cut(s) 402, 1017
AdeI CACNNNGTG 1 cut(s) 1091
AfaI GTAC 5 cut(s) 219, 227, 376, 741, 1684
AfeI AGCGCT 1 cut(s) 1110
AfiI CCNNNNNNNGG 6 cut(s) 31, 160, 642, 835, 1151, 2209
AflII CTTAAG 1 cut(s) 2158
AflIII ACRYGT 4 cut(s) 960, 1727, 2038, 2328
AgeI ACCGGT 1 cut(s) 547
AgsI TTSAA 9 cut(s) 131, 502, 593, 623, 641, 901, 1191, 1690, 2101
AhdI GACNNNNNGTC 2 cut(s) 883, 2120
AhlI ACTAGT 1 cut(s) 352
AjiI CACGTC 1 cut(s) 1730
AjnI CCWGG 3 cut(s) 445, 1432, 1907
AjuI GAANNNNNNNTTGG 4 cut(s) 494, 526, 846, 878
Alw21I GWGCWC 1 cut(s) 1096
Alw26I GTCTC 5 cut(s) 48, 577, 618, 1486, 1736
AlwI GGATC 9 cut(s) 42, 318, 409, 726, 739, 1247, 1881, 1922, 2035
Aor51HI AGCGCT 1 cut(s) 1110
AoxI GGCC 5 cut(s) 633, 826, 1008, 1826, 2257
ApeKI GCWGC 7 cut(s) 97, 100, 344, 992, 1214, 1265, 1322
ApoI RAATTY 3 cut(s) 1336, 1747, 2336
ArsI GACNNNNNNTTYG 6 cut(s) 13, 45, 307, 339, 1025, 1057
AseI ATTAAT 1 cut(s) 366
AsiGI ACCGGT 1 cut(s) 547
Asp700I GAANNNNTTC 2 cut(s) 1186, 1747
AspLEI GCGC 3 cut(s) 1111, 2489, 2524
AspS9I GGNCC 6 cut(s) 21, 323, 484, 826, 1024, 2257
AsuC2I CCSGG 1 cut(s) 19
AsuHPI GGTGA 3 cut(s) 38, 782, 1456
AsuII TTCGAA 1 cut(s) 1129
AsuNHI GCTAGC 1 cut(s) 1894
AvaII GGWCC 4 cut(s) 21, 323, 484, 1024
AxyI CCTNAGG 1 cut(s) 657
BamHI GGATCC 1 cut(s) 731
BauI CACGAG 1 cut(s) 1086
BbsI GAAGAC 2 cut(s) 696, 1076
Bbv12I GWGCWC 1 cut(s) 1096
BbvI GCAGC 7 cut(s) 109, 112, 331, 979, 1201, 1277, 1309
BccI CCATC 7 cut(s) 58, 154, 660, 1519, 1716, 1787, 2042
BciT130I CCWGG 3 cut(s) 447, 1434, 1909
BclI TGATCA 1 cut(s) 535
BcnI CCSGG 1 cut(s) 19
BcoDI GTCTC 5 cut(s) 48, 577, 618, 1486, 1736
BcuI ACTAGT 1 cut(s) 352
BfmI CTRYAG 1 cut(s) 345
BfoI RGCGCY 1 cut(s) 1112
BfrI CTTAAG 1 cut(s) 2158
BisI GCNGC 8 cut(s) 98, 101, 345, 993, 1215, 1266, 1323, 1326
BlsI GCNGC 8 cut(s) 99, 102, 346, 994, 1216, 1267, 1324, 1327
BmcAI AGTACT 1 cut(s) 1684
Bme1390I CCNGG 4 cut(s) 19, 447, 1434, 1909
Bme18I GGWCC 4 cut(s) 21, 323, 484, 1024
BmeRI GACNNNNNGTC 2 cut(s) 883, 2120
BmgBI CACGTC 1 cut(s) 1730
BmgT120I GGNCC 6 cut(s) 21, 323, 484, 826, 1024, 2257
BmiI GGNNCC 6 cut(s) 22, 23, 444, 733, 1025, 1706
BmrFI CCNGG 4 cut(s) 19, 447, 1434, 1909
BmrI ACTGGG 3 cut(s) 166, 1422, 2264
BmsI GCATC 8 cut(s) 124, 1039, 1378, 1909, 2206, 2275, 2279, 2425
BmtI GCTAGC 1 cut(s) 1898
BmuI ACTGGG 3 cut(s) 166, 1422, 2264
BpiI GAAGAC 2 cut(s) 696, 1076
BpmI CTGGAG 3 cut(s) 941, 1080, 1413
Bpu10I CCTNAGC 2 cut(s) 1012, 1356
Bpu14I TTCGAA 1 cut(s) 1129
BpuEI CTTGAG 3 cut(s) 50, 600, 2399
BpuMI CCSGG 1 cut(s) 19
BsaBI GATNNNNATC 3 cut(s) 90, 1053, 2052
BsaJI CCNNGG 1 cut(s) 446
BsaWI WCCGGW 1 cut(s) 547
BsaXI ACNNNNNCTCC 2 cut(s) 1428, 1458
Bsc4I CCNNNNNNNGG 6 cut(s) 31, 160, 642, 835, 1151, 2209
Bse118I RCCGGY 1 cut(s) 547
Bse21I CCTNAGG 1 cut(s) 657
Bse3DI GCAATG 1 cut(s) 2340
Bse8I GATNNNNATC 3 cut(s) 90, 1053, 2052
BseBI CCWGG 3 cut(s) 447, 1434, 1909
BseDI CCNNGG 1 cut(s) 446
BseGI GGATG 8 cut(s) 400, 612, 864, 1423, 1507, 1708, 2030, 2440
BseJI GATNNNNATC 3 cut(s) 90, 1053, 2052
BseLI CCNNNNNNNGG 6 cut(s) 31, 160, 642, 835, 1151, 2209
BseMI GCAATG 1 cut(s) 2340
BseMII CTCAG 6 cut(s) 452, 648, 836, 1647, 1977, 2420
BseRI GAGGAG 2 cut(s) 674, 938
BseXI GCAGC 7 cut(s) 109, 112, 331, 979, 1201, 1277, 1309
BsgI GTGCAG 1 cut(s) 1756
Bsh1236I CGCG 2 cut(s) 333, 2489
BshFI GGCC 5 cut(s) 635, 828, 1010, 1828, 2259
BshTI ACCGGT 1 cut(s) 547
BsiHKAI GWGCWC 1 cut(s) 1096
BsiSI CCGG 2 cut(s) 18, 548
BslFI GGGAC 6 cut(s) 34, 1037, 1423, 1475, 2077, 2108
BslI CCNNNNNNNGG 6 cut(s) 31, 160, 642, 835, 1151, 2209
BsmAI GTCTC 5 cut(s) 48, 577, 618, 1486, 1736
BsmBI CGTCTC 2 cut(s) 1486, 1736
BsmFI GGGAC 6 cut(s) 34, 1037, 1423, 1475, 2077, 2108
BsmI GAATGC 1 cut(s) 907
BsnI GGCC 5 cut(s) 635, 828, 1010, 1828, 2259
Bsp119I TTCGAA 1 cut(s) 1129
Bsp1286I GDGCHC 1 cut(s) 1096
Bsp1407I TGTACA 2 cut(s) 217, 739
Bsp68I TCGCGA 1 cut(s) 333
BspACI CCGC 5 cut(s) 407, 795, 1326, 1539, 2388
BspANI GGCC 5 cut(s) 635, 828, 1010, 1828, 2259
BspCNI CTCAG 6 cut(s) 451, 649, 835, 1648, 1976, 2421
BspFNI CGCG 2 cut(s) 333, 2489
BspLI GGNNCC 6 cut(s) 22, 23, 444, 733, 1025, 1706
BspMAI CTGCAG 1 cut(s) 349
BspOI GCTAGC 1 cut(s) 1898
BspPI GGATC 9 cut(s) 42, 318, 409, 726, 739, 1247, 1881, 1922, 2035
BspT104I TTCGAA 1 cut(s) 1129
BspTI CTTAAG 1 cut(s) 2158
BsrDI GCAATG 1 cut(s) 2340
BsrFI RCCGGY 1 cut(s) 547
BsrGI TGTACA 2 cut(s) 217, 739
BssAI RCCGGY 1 cut(s) 547
BssECI CCNNGG 1 cut(s) 446
BssSI CACGAG 1 cut(s) 1086
Bst2BI CACGAG 1 cut(s) 1086
Bst2UI CCWGG 3 cut(s) 447, 1434, 1909
Bst4CI ACNGT 6 cut(s) 121, 251, 1201, 1466, 2402, 2496
Bst6I CTCTTC 4 cut(s) 1131, 1484, 1604, 1639
BstAFI CTTAAG 1 cut(s) 2158
BstAUI TGTACA 2 cut(s) 217, 739
BstBI TTCGAA 1 cut(s) 1129
BstC8I GCNNGC 8 cut(s) 335, 725, 1896, 2204, 2390, 2394, 2468, 2520
BstENI CCTNNNNNAGG 2 cut(s) 833, 1149
BstF5I GGATG 8 cut(s) 400, 612, 864, 1423, 1507, 1708, 2030, 2440
BstFNI CGCG 2 cut(s) 333, 2489
BstH2I RGCGCY 1 cut(s) 1112
BstHHI GCGC 3 cut(s) 1111, 2489, 2524
BstMAI GTCTC 5 cut(s) 48, 577, 618, 1486, 1736
BstMWI GCNNNNNNNGC 5 cut(s) 801, 998, 1007, 1183, 1366
BstNI CCWGG 3 cut(s) 447, 1434, 1909
BstNSI RCATGY 5 cut(s) 964, 2042, 2332, 2470, 2522
BstSCI CCNGG 4 cut(s) 17, 445, 1432, 1907
BstSFI CTRYAG 1 cut(s) 345
BstUI CGCG 2 cut(s) 333, 2489
BstV1I GCAGC 7 cut(s) 109, 112, 331, 979, 1201, 1277, 1309
BstV2I GAAGAC 2 cut(s) 696, 1076
BstX2I RGATCY 6 cut(s) 34, 401, 731, 1252, 1886, 1927
BstYI RGATCY 6 cut(s) 34, 401, 731, 1252, 1886, 1927
Bsu36I CCTNAGG 1 cut(s) 657
BsuRI GGCC 5 cut(s) 635, 828, 1010, 1828, 2259
BtgZI GCGATG 3 cut(s) 314, 679, 2230
BtrI CACGTC 1 cut(s) 1730
BtsCI GGATG 8 cut(s) 400, 612, 864, 1423, 1507, 1708, 2030, 2440
BtsIMutI CAGTG 6 cut(s) 256, 1531, 1937, 2010, 2364, 2477
BtuMI TCGCGA 1 cut(s) 333
Cac8I GCNNGC 8 cut(s) 335, 725, 1896, 2204, 2390, 2394, 2468, 2520
CfoI GCGC 3 cut(s) 1111, 2489, 2524
Cfr10I RCCGGY 1 cut(s) 547
Cfr13I GGNCC 6 cut(s) 21, 323, 484, 826, 1024, 2257
Csp6I GTAC 5 cut(s) 218, 226, 375, 740, 1683
CspAI ACCGGT 1 cut(s) 547
CviQI GTAC 5 cut(s) 218, 226, 375, 740, 1683
DraI TTTAAA 1 cut(s) 1500
DraIII CACNNNGTG 1 cut(s) 1091
DriI GACNNNNNGTC 2 cut(s) 883, 2120
Eam1104I CTCTTC 4 cut(s) 1131, 1484, 1604, 1639
Eam1105I GACNNNNNGTC 2 cut(s) 883, 2120
EarI CTCTTC 4 cut(s) 1131, 1484, 1604, 1639
EciI GGCGGA 2 cut(s) 396, 1554
Eco147I AGGCCT 2 cut(s) 635, 1010
Eco47I GGWCC 4 cut(s) 21, 323, 484, 1024
Eco47III AGCGCT 1 cut(s) 1110
Eco57I CTGAAG 2 cut(s) 402, 1017
Eco81I CCTNAGG 1 cut(s) 657
EcoNI CCTNNNNNAGG 2 cut(s) 833, 1149
EcoO109I RGGNCCY 3 cut(s) 21, 826, 1024
EcoRI GAATTC 1 cut(s) 2336
EcoRII CCWGG 3 cut(s) 445, 1432, 1907
EcoT22I ATGCAT 2 cut(s) 2149, 2520
Esp3I CGTCTC 2 cut(s) 1486, 1736
FalI AAGNNNNNCTT 2 cut(s) 1735, 1767
FaqI GGGAC 6 cut(s) 34, 1037, 1423, 1475, 2077, 2108
FauI CCCGC 1 cut(s) 2381
FauNDI CATATG 2 cut(s) 1018, 2182
FbaI TGATCA 1 cut(s) 535
FblI GTMKAC 2 cut(s) 1345, 1944
Fnu4HI GCNGC 8 cut(s) 98, 101, 345, 993, 1215, 1266, 1323, 1326
FokI GGATG 8 cut(s) 407, 619, 871, 1430, 1494, 1695, 2017, 2447
Fsp4HI GCNGC 8 cut(s) 98, 101, 345, 993, 1215, 1266, 1323, 1326
GlaI GCGC 3 cut(s) 1110, 2488, 2523
GluI GCNGC 8 cut(s) 98, 101, 345, 993, 1215, 1266, 1323, 1326
GsuI CTGGAG 3 cut(s) 941, 1080, 1413
HaeII RGCGCY 1 cut(s) 1112
HaeIII GGCC 5 cut(s) 635, 828, 1010, 1828, 2259
HapII CCGG 2 cut(s) 18, 548
HhaI GCGC 3 cut(s) 1111, 2489, 2524
Hin6I GCGC 3 cut(s) 1109, 2487, 2522
HinP1I GCGC 3 cut(s) 1109, 2487, 2522
HincII GTYRAC 1 cut(s) 958
HindII GTYRAC 1 cut(s) 958
HpaII CCGG 2 cut(s) 18, 548
HphI GGTGA 3 cut(s) 38, 782, 1456
Hpy166II GTNNAC 7 cut(s) 218, 484, 958, 1346, 1945, 2354, 2501
Hpy8I GTNNAC 7 cut(s) 218, 484, 958, 1346, 1945, 2354, 2501
Hpy99I CGWCG 1 cut(s) 509
HpyAV CCTTC 8 cut(s) 377, 392, 745, 848, 1037, 1479, 1573, 2157
HpyCH4III ACNGT 6 cut(s) 121, 251, 1201, 1466, 2402, 2496
HpyCH4IV ACGT 5 cut(s) 507, 939, 1495, 1729, 2022
HpyF10VI GCNNNNNNNGC 5 cut(s) 801, 998, 1007, 1183, 1366
HpySE526I ACGT 5 cut(s) 507, 939, 1495, 1729, 2022
HspAI GCGC 3 cut(s) 1109, 2487, 2522
KflI GGGWCCC 1 cut(s) 21
Ksp22I TGATCA 1 cut(s) 535
LmnI GCTCC 3 cut(s) 661, 1099, 1704
Lsp1109I GCAGC 7 cut(s) 109, 112, 331, 979, 1201, 1277, 1309
LweI GCATC 8 cut(s) 124, 1039, 1378, 1909, 2206, 2275, 2279, 2425
MaeII ACGT 5 cut(s) 507, 939, 1495, 1729, 2022
MaeIII GTNAC 6 cut(s) 770, 935, 1453, 1573, 1899, 2362
MfeI CAATTG 1 cut(s) 411
MflI RGATCY 6 cut(s) 34, 401, 731, 1252, 1886, 1927
MhlI GDGCHC 1 cut(s) 1096
MlyI GAGTC 2 cut(s) 428, 461
MmeI TCCRAC 3 cut(s) 288, 867, 2313
Mph1103I ATGCAT 2 cut(s) 2149, 2520
MroXI GAANNNNTTC 2 cut(s) 1186, 1747
MslI CAYNNNNRTG 3 cut(s) 765, 900, 2021
MspCI CTTAAG 1 cut(s) 2158
MspI CCGG 2 cut(s) 18, 548
MspR9I CCNGG 4 cut(s) 19, 447, 1434, 1909
MunI CAATTG 1 cut(s) 411
Mva1269I GAATGC 1 cut(s) 907
MvaI CCWGG 3 cut(s) 447, 1434, 1909
MvnI CGCG 2 cut(s) 333, 2489
MwoI GCNNNNNNNGC 5 cut(s) 801, 998, 1007, 1183, 1366
NciI CCSGG 1 cut(s) 19
NdeI CATATG 2 cut(s) 1018, 2182
NheI GCTAGC 1 cut(s) 1894
NlaIV GGNNCC 6 cut(s) 22, 23, 444, 733, 1025, 1706
NmuCI GTSAC 2 cut(s) 770, 935
NruI TCGCGA 1 cut(s) 333
NsiI ATGCAT 2 cut(s) 2149, 2520
NspI RCATGY 5 cut(s) 964, 2042, 2332, 2470, 2522
NspV TTCGAA 1 cut(s) 1129
PaeI GCATGC 2 cut(s) 2470, 2522
PceI AGGCCT 2 cut(s) 635, 1010
PciI ACATGT 3 cut(s) 960, 2038, 2328
PctI GAATGC 1 cut(s) 907
PdmI GAANNNNTTC 2 cut(s) 1186, 1747
PfeI GAWTC 8 cut(s) 745, 848, 872, 1293, 1429, 1697, 1877, 2129
PflMI CCANNNNNTGG 2 cut(s) 31, 2209
PfoI TCCNGGA 2 cut(s) 1432, 1907
PinAI ACCGGT 1 cut(s) 547
PkrI GCNGC 8 cut(s) 99, 102, 346, 994, 1216, 1267, 1324, 1327
PleI GAGTC 2 cut(s) 428, 460
PpsI GAGTC 2 cut(s) 428, 460
PpuMI RGGWCCY 2 cut(s) 21, 1024
PscI ACATGT 3 cut(s) 960, 2038, 2328
PshBI ATTAAT 1 cut(s) 366
Psp5II RGGWCCY 2 cut(s) 21, 1024
Psp6I CCWGG 3 cut(s) 445, 1432, 1907
PspGI CCWGG 3 cut(s) 445, 1432, 1907
PspN4I GGNNCC 6 cut(s) 22, 23, 444, 733, 1025, 1706
PspPI GGNCC 6 cut(s) 21, 323, 484, 826, 1024, 2257
PspPPI RGGWCCY 2 cut(s) 21, 1024
PsrI GAACNNNNNNTAC 2 cut(s) 1666, 1698
PstI CTGCAG 1 cut(s) 349
PsuI RGATCY 6 cut(s) 34, 401, 731, 1252, 1886, 1927
RruI TCGCGA 1 cut(s) 333
RsaI GTAC 5 cut(s) 219, 227, 376, 741, 1684
RsaNI GTAC 5 cut(s) 218, 226, 375, 740, 1683
RseI CAYNNNNRTG 3 cut(s) 765, 900, 2021
SatI GCNGC 8 cut(s) 98, 101, 345, 993, 1215, 1266, 1323, 1326
Sau96I GGNCC 6 cut(s) 21, 323, 484, 826, 1024, 2257
ScaI AGTACT 1 cut(s) 1684
SchI GAGTC 2 cut(s) 428, 461
ScrFI CCNGG 4 cut(s) 19, 447, 1434, 1909
SduI GDGCHC 1 cut(s) 1096
SfaNI GCATC 8 cut(s) 124, 1039, 1378, 1909, 2206, 2275, 2279, 2425
SfcI CTRYAG 1 cut(s) 345
SfuI TTCGAA 1 cut(s) 1129
SinI GGWCC 4 cut(s) 21, 323, 484, 1024
SmiMI CAYNNNNRTG 3 cut(s) 765, 900, 2021
SmlI CTYRAG 4 cut(s) 65, 615, 2158, 2378
SmoI CTYRAG 4 cut(s) 65, 615, 2158, 2378
SpeI ACTAGT 1 cut(s) 352
SphI GCATGC 2 cut(s) 2470, 2522
SseBI AGGCCT 2 cut(s) 635, 1010
SsiI CCGC 5 cut(s) 407, 795, 1326, 1539, 2388
StuI AGGCCT 2 cut(s) 635, 1010
StyD4I CCNGG 4 cut(s) 17, 445, 1432, 1907
TaaI ACNGT 6 cut(s) 121, 251, 1201, 1466, 2402, 2496
TaiI ACGT 5 cut(s) 510, 942, 1498, 1732, 2025
TaqI TCGA 7 cut(s) 158, 180, 715, 1129, 1238, 1372, 2188
TaqII GACCGA 1 cut(s) 311
TatI WGTACW 3 cut(s) 217, 739, 1682
TauI GCSGC 1 cut(s) 1328
TfiI GAWTC 8 cut(s) 745, 848, 872, 1293, 1429, 1697, 1877, 2129
TscAI CASTG 6 cut(s) 256, 1531, 1944, 2017, 2364, 2484
TseFI GTSAC 2 cut(s) 770, 935
TseI GCWGC 7 cut(s) 97, 100, 344, 992, 1214, 1265, 1322
Tsp45I GTSAC 2 cut(s) 770, 935
TspGWI ACGGA 1 cut(s) 724
TspRI CASTG 6 cut(s) 256, 1531, 1944, 2017, 2364, 2484
Van91I CCANNNNNTGG 2 cut(s) 31, 2209
Vha464I CTTAAG 1 cut(s) 2158
VpaK11BI GGWCC 4 cut(s) 21, 323, 484, 1024
VspI ATTAAT 1 cut(s) 366
XagI CCTNNNNNAGG 2 cut(s) 833, 1149
XapI RAATTY 3 cut(s) 1336, 1747, 2336
XceI RCATGY 5 cut(s) 964, 2042, 2332, 2470, 2522
XcmI CCANNNNNNNNNTGG 1 cut(s) 304
XmiI GTMKAC 2 cut(s) 1345, 1944
XmnI GAANNNNTTC 2 cut(s) 1186, 1747
ZrmI AGTACT 1 cut(s) 1684
Zsp2I ATGCAT 2 cut(s) 2149, 2520
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.