RLG00000012019

breast cancer carboxy-terminal domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0011125
Physical Location & Seq
Forward (+)
14602177 .. 14605916
3740 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000012019

Sequence Viewer

Length: 2733 bp
ATGGCGGTTTCTCACGCCCAGACCCACACCTCTGATTCTCACCCTCACCCATCTGGGTATAATGAGCTCACAGATGAAGATGATCAGAACCACCCCCAATTCCAAGACACCGAGCCCTTTGATGAGACTATGGTGCCTGATAGCCCATTAATGGAGGAAACCCAGTTGGTGGATGGTTCGGATTGCGATGACAAGATGAGGACTGGTATGAGTGGGTTTGAGGATGAAGTGGTGCTTGACAGTGAGGATGAGGAAGTTAATGGAAGCCGAATAGTGACTCTTAGAAATTTGTCTTTGGATCGAATATGCGCTGCAGGGTTAAGTTACGTTGACTCTCAGGAACCAGGGGAGGAATCCCAAGTCAATGCACTTGATTTTGTGGATCATTTTGTGACGTTGAACGACGATCTTAGTTTTTATTCTCCAGGAACTGCCAACTGGAAAACCACTAAGGTGAAATCCCCTCCTGTTACAAACACAATGGGGACTCATAGTTTGGCGAGGTTGGTTGAACTCAGGTCTCAAAATGAAAAAGCCAAAGCCTTTGAATGGGTTGATCCTGAGGAGAATGGAGCACTTCGTTTTTTAGACAAGAAGATGGAATCATCTTCGGTTATTCCTGAGGGCAAGGAGAGATCTGGTGTTGCAAGGAAAGAGAAAGTCAGGCATGCTAATGATACAAAATGTATTAGCTCAGGTGATGGGGGCAAAAAAGAGAGGAGCATAATTCGAAACCTCCACAAGGAAATCACAGAATCTGAAGGCAAGATTGAAAACGAGTCTGTCAATGCATCAGAAGATTATTTATATGCAAAACCAACAGAACTCCAGCTGGAACCTAGTGAGGAAGGAGGAAATATAGTTGACATGTTTGATATTGGTTTTAACACTCAAATTGCTGCCGAAGCTATGGAGGCCTTAGCATATGGGGGCCATCCTGGCTGCAATACTGCGGATGCTGGTTCAGGAGGTGTTAAAGAGAATACAGCTTCTTTGGAACATCACTCTCCTCAAAGGAGTAATTTTTCTAATGTTGCAGGTATTAGCAAAAATGTAAACCGAAGAAACCGCTCCACTAGAGTACCAAGGAGAGCAGGTGCTTCATCTCAAAAACCATCTAAGAAGCAAGAGTTAGATCCTGATTTGGCGGCAGTAACAAATGTGAAGAGAAGCAGATTTTTTGGTGAGTCTTGTAGTAATTTTGCCGAGGCCAATGATAGTTTATGTATAGAATCGCCCAAGTCTGTCAAGAAAAGGAAGCTACAGAGTTTAGCTGATTATTCCAAGTTTTCTTCTTCTGGAAAACACCAGACTACCCAGTCAACGTCAGGGGGTAGGTCAAGAAGGACTGAGGATGGATCAAACAATGGTGTGGGGGATGGTATTGTTACATACAGAAGAAAGAAGAGATGTTTAAAAGCTCAATCACCTGAAATGTTCAGTAGTTCTGAGGCTGGATCAGACGAGCCAGTAGAAAAGAAAAACAATGTTAAGAAGGACAACATTGTCACATACAGGAGAAAGAAGAGAATAGGTGCAAAAGAAAGTCGTTCAGTTTATGTTTCATCAGAGGGAAATAGTTGCAGAGAAGCCTGTAGCTTAAAACTAGGTCTATGGAGTCATCCCAAAGGGAAAAGAACAGGTCGCAATGCTCGAAGCAATTCCTGCAGAGCTCCTGTTCCTTCTACTCCAGTTCCACTACTTGACAAAAAGGACAGTTCCCATTCTGATGAAAGGCCAGAAAGCAGCAACAATATGGCTGGGAAAGAACAATCATCGTATTGCCCACCGGTGCTTTCCTTAGATAACAACTCTGACAGAACCTTGTTTGAATTGCAATCTGGCGAGCTAGTTGGGACAGATCCTACATCTTCTGGTACGGAATGTACTGCACCATCTAACTCTACCACTGGCATAAATGTGGGATCATCCAAATATGTATCTCATGACTATCACAAAAAGCCATGCAACAAAAACTTACCCAAATCATCTCTTATGAAAGAGCTTATTGGACTAGGTGTCCCTGAGTCGATGCCAGATTTTACTTGGAAAGATTTGAGAAGGCGAAGAAGTATGGCCTATGTTCAAGTTCTGTTTAGCCAGCATTTGGATGATGATATCATTAAGCAGCAGAAAAAGATCATTGCACGACTGGGCCTATCCGTTGCTTCATGTTCTATGGATGCAACACACTTTATAGCAGATCAATTTGCACGTACAAGGAATATGTTGGAATTCATTGCTCTTGGTAAACCAGTGGTAACACATTTGTGGCTTGAGAGTTGTGGGGAAGCAAATTGTTTGATTAGTGAGAAAAGCTATATTCTGAGGGATGCCAAAAAGGAAAAGGAAATTGGTTTTAGCATGCTTGTTTCACTGGACTGTGCAAAACGGTGTCCGCTTCTAAAGGGTCGAAAAGTCTTCATTACTCCAAACATAAAACCTGGAAAAGAAATGATGACCAGCTTGGTGAAGACAGCTCAGGGCGAGCCAGTGGAGAAAGCTCAGATATCTGCCGGAAAGGGTAAAAAGATTTTCAATGAATTATTGATTCTTTCTTGTGAAGAAGATGAAGCAATCTGTCTACCTTTCCTTGAGAAAGGTGCAGCAGTTTACAGTTCAGAACTTTTACTAAATGGTATAGTTATCCAGAGACTGGAATACAAGAGACATCAGCTCTTCACCAAAGGCCTACCACATAATGAGGGGGACTGTATAAAACCATGTAGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RTT107_BRCT_5

Protein Analysis

911

Amino Acids

100.37

Weight (kDa)

6.65

Isoelectric Point (pI)

55.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BRCT_2 PF16589 800 - 888 1.9e-16 BRCT domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011125)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G03130 AT4G03130 AT4G03130 AT4G03130
fragaria_vesca FvH4_2g24660
malus_domestica MD11G1297400.v1.1 MD11G1297500.v1.1
prunus_persica Prupe.8G251900_v2.0.a1 Prupe.8G251900_v2.0.a1
pyrus_communis pycom11g26140
rosa_chinensis RchiOBHm_Chr6g0292491
rosa_laevigata RLG00000012019
rosa_multiflora Rmu_sc0001354.1_g000027
rosa_roxburghii Rroxscaffold_7G00175010
rosa_rugosa Rorug06G0227200
rosa_samantha Rh6AG340400 Rh6BG347700 Rh6CG354700 Rh6DG340500
rosa_wichuraiana Rw6G029640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1085
AasI GACNNNNNNGTC 2 cut(s) 1318, 1505
Acc36I ACCTGC 2 cut(s) 1028, 1085
AccB1I GGYRCC 1 cut(s) 133
AccB7I CCANNNNNTGG 3 cut(s) 169, 2107, 2656
AccBSI CCGCTC 1 cut(s) 1071
AccI GTMKAC 1 cut(s) 2584
AciI CCGC 5 cut(s) 5, 953, 1069, 1148, 2399
AclWI GGATC 8 cut(s) 306, 390, 551, 1130, 1366, 1465, 1856, 1933
AcsI RAATTY 2 cut(s) 286, 2234
AcuI CTGAAG 1 cut(s) 780
AfaI GTAC 4 cut(s) 1083, 1879, 1888, 2218
AfiI CCNNNNNNNGG 6 cut(s) 151, 169, 549, 742, 2107, 2656
AflIII ACRYGT 1 cut(s) 867
AgeI ACCGGT 1 cut(s) 1789
AgsI TTSAA 7 cut(s) 400, 512, 548, 773, 1832, 2087, 2539
AhdI GACNNNNNGTC 1 cut(s) 2018
AjnI CCWGG 4 cut(s) 343, 424, 937, 2443
AjuI GAANNNNNNNTTGG 2 cut(s) 2337, 2369
AleI CACNNNNGTG 2 cut(s) 452, 2269
Alw21I GWGCWC 3 cut(s) 69, 577, 1675
Alw26I GTCTC 4 cut(s) 119, 525, 2647, 2662
AlwI GGATC 8 cut(s) 306, 390, 551, 1130, 1366, 1465, 1856, 1933
AlwNI CAGNNNCTG 3 cut(s) 431, 758, 2656
AoxI GGCC 7 cut(s) 915, 931, 1209, 1736, 2076, 2155, 2689
ApeKI GCWGC 6 cut(s) 311, 899, 942, 1746, 2128, 2606
ApoI RAATTY 2 cut(s) 286, 2234
ArsI GACNNNNNNTTYG 2 cut(s) 478, 510
AseI ATTAAT 1 cut(s) 149
AsiGI ACCGGT 1 cut(s) 1789
Asp700I GAANNNNTTC 1 cut(s) 1660
AspLEI GCGC 1 cut(s) 311
AspS9I GGNCC 2 cut(s) 931, 2155
AsuHPI GGTGA 8 cut(s) 32, 38, 466, 710, 1196, 1419, 2482, 2674
AsuII TTCGAA 1 cut(s) 730
AxyI CCTNAGG 2 cut(s) 561, 621
BaeI ACNNNNGTAYC 2 cut(s) 1065, 1098
BanI GGYRCC 1 cut(s) 133
BanII GRGCYC 3 cut(s) 69, 117, 1675
BbsI GAAGAC 2 cut(s) 2413, 2480
Bbv12I GWGCWC 3 cut(s) 69, 577, 1675
BbvI GCAGC 6 cut(s) 298, 886, 929, 1758, 2140, 2618
BccI CCATC 9 cut(s) 58, 167, 592, 695, 942, 1123, 1349, 1373, 1903
BciT130I CCWGG 4 cut(s) 345, 426, 939, 2445
BclI TGATCA 1 cut(s) 82
BcoDI GTCTC 4 cut(s) 119, 525, 2647, 2662
BfaI CTAG 5 cut(s) 840, 1077, 1607, 1850, 2015
BfmI CTRYAG 4 cut(s) 312, 1262, 1594, 1666
BfuAI ACCTGC 2 cut(s) 1028, 1085
BglI GCCNNNNNGGC 1 cut(s) 939
BglII AGATCT 1 cut(s) 635
BisI GCNGC 7 cut(s) 312, 900, 943, 1149, 1747, 2129, 2607
BlsI GCNGC 7 cut(s) 313, 901, 944, 1150, 1748, 2130, 2608
Bme1390I CCNGG 4 cut(s) 345, 426, 939, 2445
BmeRI GACNNNNNGTC 1 cut(s) 2018
BmgT120I GGNCC 2 cut(s) 931, 2155
BmiI GGNNCC 4 cut(s) 135, 342, 837, 932
BmrFI CCNGG 4 cut(s) 345, 426, 939, 2445
BmrI ACTGGG 3 cut(s) 157, 1312, 2162
BmsI GCATC 5 cut(s) 800, 946, 2022, 2173, 2323
BmuI ACTGGG 3 cut(s) 157, 1312, 2162
BpiI GAAGAC 2 cut(s) 2413, 2480
BpmI CTGGAG 3 cut(s) 408, 812, 1674
Bpu10I CCTNAGC 3 cut(s) 694, 919, 2481
Bpu14I TTCGAA 1 cut(s) 730
BpuEI CTTGAG 2 cut(s) 2297, 2615
BsaAI YACGTR 1 cut(s) 2216
BsaI GGTCTC 1 cut(s) 525
BsaJI CCNNGG 3 cut(s) 344, 1085, 1206
BsaWI WCCGGW 1 cut(s) 1789
BsaXI ACNNNNNCTCC 2 cut(s) 1081, 1111
Bsc4I CCNNNNNNNGG 6 cut(s) 151, 169, 549, 742, 2107, 2656
Bse118I RCCGGY 1 cut(s) 1789
Bse21I CCTNAGG 2 cut(s) 561, 621
Bse3DI GCAATG 3 cut(s) 1654, 2142, 2238
BseBI CCWGG 4 cut(s) 345, 426, 939, 2445
BseDI CCNNGG 3 cut(s) 344, 1085, 1206
BseLI CCNNNNNNNGG 6 cut(s) 151, 169, 549, 742, 2107, 2656
BseMI GCAATG 3 cut(s) 1654, 2142, 2238
BseRI GAGGAG 3 cut(s) 578, 733, 999
BseXI GCAGC 6 cut(s) 298, 886, 929, 1758, 2140, 2618
BseYI CCCAGC 1 cut(s) 1760
BsgI GTGCAG 2 cut(s) 1875, 2625
BshFI GGCC 7 cut(s) 917, 933, 1211, 1738, 2078, 2157, 2691
BshNI GGYRCC 1 cut(s) 133
BshTI ACCGGT 1 cut(s) 1789
BsiHKAI GWGCWC 3 cut(s) 69, 577, 1675
BsiSI CCGG 2 cut(s) 1790, 2517
BslFI GGGAC 4 cut(s) 499, 1870, 2006, 2723
BslI CCNNNNNNNGG 6 cut(s) 151, 169, 549, 742, 2107, 2656
BsmAI GTCTC 4 cut(s) 119, 525, 2647, 2662
BsmFI GGGAC 4 cut(s) 499, 1870, 2006, 2723
BsnI GGCC 7 cut(s) 917, 933, 1211, 1738, 2078, 2157, 2691
Bso31I GGTCTC 1 cut(s) 525
Bsp119I TTCGAA 1 cut(s) 730
Bsp1286I GDGCHC 4 cut(s) 69, 117, 577, 1675
BspACI CCGC 5 cut(s) 5, 953, 1069, 1148, 2399
BspANI GGCC 7 cut(s) 917, 933, 1211, 1738, 2078, 2157, 2691
BspHI TCATGA 1 cut(s) 1945
BspLI GGNNCC 4 cut(s) 135, 342, 837, 932
BspMAI CTGCAG 2 cut(s) 316, 1670
BspMI ACCTGC 2 cut(s) 1028, 1085
BspPI GGATC 8 cut(s) 306, 390, 551, 1130, 1366, 1465, 1856, 1933
BspQI GCTCTTC 1 cut(s) 2684
BspT104I TTCGAA 1 cut(s) 730
BspT107I GGYRCC 1 cut(s) 133
BspTNI GGTCTC 1 cut(s) 525
BsrBI CCGCTC 1 cut(s) 1071
BsrDI GCAATG 3 cut(s) 1654, 2142, 2238
BsrFI RCCGGY 1 cut(s) 1789
BssAI RCCGGY 1 cut(s) 1789
BssECI CCNNGG 3 cut(s) 344, 1085, 1206
BssT1I CCWWGG 1 cut(s) 1085
Bst2UI CCWGG 4 cut(s) 345, 426, 939, 2445
Bst4CI ACNGT 6 cut(s) 242, 1718, 2384, 2394, 2618, 2714
Bst6I CTCTTC 4 cut(s) 1160, 1400, 1520, 2684
BstAPI GCANNNNNTGC 1 cut(s) 1665
BstBAI YACGTR 1 cut(s) 2216
BstBI TTCGAA 1 cut(s) 730
BstC8I GCNNGC 5 cut(s) 669, 1847, 2102, 2366, 2489
BstENI CCTNNNNNAGG 1 cut(s) 740
BstHHI GCGC 1 cut(s) 311
BstMAI GTCTC 4 cut(s) 119, 525, 2647, 2662
BstMWI GCNNNNNNNGC 4 cut(s) 905, 914, 939, 1665
BstNI CCWGG 4 cut(s) 345, 426, 939, 2445
BstNSI RCATGY 3 cut(s) 671, 871, 2368
BstSCI CCNGG 4 cut(s) 343, 424, 937, 2443
BstSFI CTRYAG 4 cut(s) 312, 1262, 1594, 1666
BstV1I GCAGC 6 cut(s) 298, 886, 929, 1758, 2140, 2618
BstV2I GAAGAC 2 cut(s) 2413, 2480
BstX2I RGATCY 3 cut(s) 635, 1135, 1861
BstYI RGATCY 3 cut(s) 635, 1135, 1861
Bsu36I CCTNAGG 2 cut(s) 561, 621
BsuRI GGCC 7 cut(s) 917, 933, 1211, 1738, 2078, 2157, 2691
BtgZI GCGATG 1 cut(s) 201
BtsIMutI CAGTG 5 cut(s) 247, 1908, 2262, 2375, 2499
BveI ACCTGC 2 cut(s) 1028, 1085
Cac8I GCNNGC 5 cut(s) 669, 1847, 2102, 2366, 2489
CaiI CAGNNNCTG 3 cut(s) 431, 758, 2656
CciI TCATGA 1 cut(s) 1945
CfoI GCGC 1 cut(s) 311
Cfr10I RCCGGY 1 cut(s) 1789
Cfr13I GGNCC 2 cut(s) 931, 2155
Csp6I GTAC 4 cut(s) 1082, 1878, 1887, 2217
CspAI ACCGGT 1 cut(s) 1789
CviAII CATG 7 cut(s) 668, 868, 1946, 1965, 2172, 2365, 2724
CviQI GTAC 4 cut(s) 1082, 1878, 1887, 2217
DraI TTTAAA 1 cut(s) 1416
DrdI GACNNNNNNGTC 2 cut(s) 1318, 1505
DriI GACNNNNNGTC 1 cut(s) 2018
DseDI GACNNNNNNGTC 2 cut(s) 1318, 1505
Eam1104I CTCTTC 4 cut(s) 1160, 1400, 1520, 2684
Eam1105I GACNNNNNGTC 1 cut(s) 2018
EarI CTCTTC 4 cut(s) 1160, 1400, 1520, 2684
Ecl136II GAGCTC 2 cut(s) 67, 1673
Eco130I CCWWGG 1 cut(s) 1085
Eco147I AGGCCT 2 cut(s) 917, 2691
Eco24I GRGCYC 3 cut(s) 69, 117, 1675
Eco31I GGTCTC 1 cut(s) 525
Eco32I GATATC 2 cut(s) 2119, 2511
Eco53kI GAGCTC 2 cut(s) 67, 1673
Eco57I CTGAAG 1 cut(s) 780
Eco81I CCTNAGG 2 cut(s) 561, 621
EcoICRI GAGCTC 2 cut(s) 67, 1673
EcoNI CCTNNNNNAGG 1 cut(s) 740
EcoRI GAATTC 1 cut(s) 2234
EcoRII CCWGG 4 cut(s) 343, 424, 937, 2443
EcoRV GATATC 2 cut(s) 2119, 2511
EcoT14I CCWWGG 1 cut(s) 1085
EcoT22I ATGCAT 1 cut(s) 793
EcoT38I GRGCYC 3 cut(s) 69, 117, 1675
ErhI CCWWGG 1 cut(s) 1085
FaeI CATG 7 cut(s) 671, 871, 1949, 1968, 2175, 2368, 2727
FalI AAGNNNNNCTT 2 cut(s) 219, 251
FaqI GGGAC 4 cut(s) 499, 1870, 2006, 2723
FatI CATG 7 cut(s) 667, 867, 1945, 1964, 2171, 2364, 2723
FauNDI CATATG 1 cut(s) 925
FbaI TGATCA 1 cut(s) 82
FblI GTMKAC 1 cut(s) 2584
Fnu4HI GCNGC 7 cut(s) 312, 900, 943, 1149, 1747, 2129, 2607
FriOI GRGCYC 3 cut(s) 69, 117, 1675
Fsp4HI GCNGC 7 cut(s) 312, 900, 943, 1149, 1747, 2129, 2607
FspBI CTAG 5 cut(s) 840, 1077, 1607, 1850, 2015
GlaI GCGC 1 cut(s) 310
GluI GCNGC 7 cut(s) 312, 900, 943, 1149, 1747, 2129, 2607
GsaI CCCAGC 1 cut(s) 1764
GsuI CTGGAG 3 cut(s) 408, 812, 1674
HaeIII GGCC 7 cut(s) 917, 933, 1211, 1738, 2078, 2157, 2691
HapII CCGG 2 cut(s) 1790, 2517
HhaI GCGC 1 cut(s) 311
Hin1II CATG 7 cut(s) 671, 871, 1949, 1968, 2175, 2368, 2727
Hin6I GCGC 1 cut(s) 309
HinP1I GCGC 1 cut(s) 309
HincII GTYRAC 3 cut(s) 331, 865, 1323
HindII GTYRAC 3 cut(s) 331, 865, 1323
HpaII CCGG 2 cut(s) 1790, 2517
HphI GGTGA 8 cut(s) 32, 38, 466, 710, 1196, 1419, 2482, 2674
Hpy166II GTNNAC 7 cut(s) 331, 865, 1057, 1323, 2252, 2585, 2614
Hpy8I GTNNAC 7 cut(s) 331, 865, 1057, 1323, 2252, 2585, 2614
Hpy99I CGWCG 1 cut(s) 407
HpyAV CCTTC 6 cut(s) 755, 842, 1338, 1489, 1692, 2055
HpyCH4III ACNGT 6 cut(s) 242, 1718, 2384, 2394, 2618, 2714
HpyCH4IV ACGT 4 cut(s) 327, 395, 1325, 2215
HpyF10VI GCNNNNNNNGC 4 cut(s) 905, 914, 939, 1665
HpySE526I ACGT 4 cut(s) 327, 395, 1325, 2215
Hsp92II CATG 7 cut(s) 671, 871, 1949, 1968, 2175, 2368, 2727
HspAI GCGC 1 cut(s) 309
Ksp22I TGATCA 1 cut(s) 82
LguI GCTCTTC 1 cut(s) 2684
LmnI GCTCC 4 cut(s) 572, 720, 1076, 1678
Lsp1109I GCAGC 6 cut(s) 298, 886, 929, 1758, 2140, 2618
LweI GCATC 5 cut(s) 800, 946, 2022, 2173, 2323
MaeI CTAG 5 cut(s) 840, 1077, 1607, 1850, 2015
MaeII ACGT 4 cut(s) 327, 395, 1325, 2215
MaeIII GTNAC 8 cut(s) 274, 323, 391, 469, 1153, 1387, 1507, 2260
MbiI CCGCTC 1 cut(s) 1071
MflI RGATCY 3 cut(s) 635, 1135, 1861
MhlI GDGCHC 4 cut(s) 69, 117, 577, 1675
MlyI GAGTC 7 cut(s) 271, 326, 481, 788, 1196, 1627, 2036
MmeI TCCRAC 1 cut(s) 2211
Mph1103I ATGCAT 1 cut(s) 793
MroXI GAANNNNTTC 1 cut(s) 1660
MseI TTAA 9 cut(s) 149, 258, 320, 885, 975, 1415, 1491, 1601, 2124
MslI CAYNNNNRTG 6 cut(s) 452, 672, 1728, 1919, 2109, 2269
MspA1I CMGCKG 1 cut(s) 832
MspI CCGG 2 cut(s) 1790, 2517
MspR9I CCNGG 4 cut(s) 345, 426, 939, 2445
MvaI CCWGG 4 cut(s) 345, 426, 939, 2445
MwoI GCNNNNNNNGC 4 cut(s) 905, 914, 939, 1665
NdeI CATATG 1 cut(s) 925
NlaIII CATG 7 cut(s) 671, 871, 1949, 1968, 2175, 2368, 2727
NlaIV GGNNCC 4 cut(s) 135, 342, 837, 932
NmeAIII GCCGAG 1 cut(s) 1231
NmuCI GTSAC 3 cut(s) 274, 391, 1507
NsiI ATGCAT 1 cut(s) 793
NspI RCATGY 3 cut(s) 671, 871, 2368
NspV TTCGAA 1 cut(s) 730
OliI CACNNNNGTG 2 cut(s) 452, 2269
PaeI GCATGC 2 cut(s) 671, 2368
PagI TCATGA 1 cut(s) 1945
PaqCI CACCTGC 1 cut(s) 1085
PceI AGGCCT 2 cut(s) 917, 2691
PciI ACATGT 1 cut(s) 867
PciSI GCTCTTC 1 cut(s) 2684
PcsI WCGNNNNNNNCGW 1 cut(s) 1651
PdmI GAANNNNTTC 1 cut(s) 1660
PfeI GAWTC 6 cut(s) 35, 353, 602, 755, 1232, 2551
PflMI CCANNNNNTGG 3 cut(s) 169, 2107, 2656
PfoI TCCNGGA 1 cut(s) 424
PinAI ACCGGT 1 cut(s) 1789
PkrI GCNGC 7 cut(s) 313, 901, 944, 1150, 1748, 2130, 2608
PleI GAGTC 7 cut(s) 271, 326, 481, 787, 1195, 1626, 2035
PpsI GAGTC 7 cut(s) 271, 326, 481, 787, 1195, 1626, 2035
Ppu21I YACGTR 1 cut(s) 2216
PscI ACATGT 1 cut(s) 867
PshBI ATTAAT 1 cut(s) 149
Psp124BI GAGCTC 2 cut(s) 69, 1675
Psp6I CCWGG 4 cut(s) 343, 424, 937, 2443
PspFI CCCAGC 1 cut(s) 1760
PspGI CCWGG 4 cut(s) 343, 424, 937, 2443
PspN4I GGNNCC 4 cut(s) 135, 342, 837, 932
PspPI GGNCC 2 cut(s) 931, 2155
PstI CTGCAG 2 cut(s) 316, 1670
PstNI CAGNNNCTG 3 cut(s) 431, 758, 2656
PsuI RGATCY 3 cut(s) 635, 1135, 1861
PvuII CAGCTG 1 cut(s) 832
RsaI GTAC 4 cut(s) 1083, 1879, 1888, 2218
RsaNI GTAC 4 cut(s) 1082, 1878, 1887, 2217
RseI CAYNNNNRTG 6 cut(s) 452, 672, 1728, 1919, 2109, 2269
SacI GAGCTC 2 cut(s) 69, 1675
SapI GCTCTTC 1 cut(s) 2684
SaqAI TTAA 9 cut(s) 149, 258, 320, 885, 975, 1415, 1491, 1601, 2124
SatI GCNGC 7 cut(s) 312, 900, 943, 1149, 1747, 2129, 2607
Sau96I GGNCC 2 cut(s) 931, 2155
SchI GAGTC 7 cut(s) 271, 326, 481, 788, 1196, 1627, 2036
ScrFI CCNGG 4 cut(s) 345, 426, 939, 2445
SduI GDGCHC 4 cut(s) 69, 117, 577, 1675
SfaNI GCATC 5 cut(s) 800, 946, 2022, 2173, 2323
SfcI CTRYAG 4 cut(s) 312, 1262, 1594, 1666
SfuI TTCGAA 1 cut(s) 730
SgrAI CRCCGGYG 1 cut(s) 1789
SmiMI CAYNNNNRTG 6 cut(s) 452, 672, 1728, 1919, 2109, 2269
SmlI CTYRAG 2 cut(s) 2276, 2594
SmoI CTYRAG 2 cut(s) 2276, 2594
SphI GCATGC 2 cut(s) 671, 2368
SseBI AGGCCT 2 cut(s) 917, 2691
SsiI CCGC 5 cut(s) 5, 953, 1069, 1148, 2399
SspMI CTAG 5 cut(s) 840, 1077, 1607, 1850, 2015
SstI GAGCTC 2 cut(s) 69, 1675
StuI AGGCCT 2 cut(s) 917, 2691
StyD4I CCNGG 4 cut(s) 343, 424, 937, 2443
StyI CCWWGG 1 cut(s) 1085
TaaI ACNGT 6 cut(s) 242, 1718, 2384, 2394, 2618, 2714
TaiI ACGT 4 cut(s) 330, 398, 1328, 2218
TaqI TCGA 5 cut(s) 301, 730, 1654, 2030, 2413
TatI WGTACW 1 cut(s) 1886
TauI GCSGC 1 cut(s) 1151
TfiI GAWTC 6 cut(s) 35, 353, 602, 755, 1232, 2551
Tru1I TTAA 9 cut(s) 149, 258, 320, 885, 975, 1415, 1491, 1601, 2124
Tru9I TTAA 9 cut(s) 149, 258, 320, 885, 975, 1415, 1491, 1601, 2124
TscAI CASTG 5 cut(s) 247, 1915, 2262, 2382, 2499
TseFI GTSAC 3 cut(s) 274, 391, 1507
TseI GCWGC 6 cut(s) 311, 899, 942, 1746, 2128, 2606
Tsp45I GTSAC 3 cut(s) 274, 391, 1507
TspGWI ACGGA 2 cut(s) 1895, 2152
TspRI CASTG 5 cut(s) 247, 1915, 2262, 2382, 2499
Van91I CCANNNNNTGG 3 cut(s) 169, 2107, 2656
VspI ATTAAT 1 cut(s) 149
XagI CCTNNNNNAGG 1 cut(s) 740
XapI RAATTY 2 cut(s) 286, 2234
XceI RCATGY 3 cut(s) 671, 871, 2368
XcmI CCANNNNNNNNNTGG 2 cut(s) 170, 2043
XmiI GTMKAC 1 cut(s) 2584
XmnI GAANNNNTTC 1 cut(s) 1660
XspI CTAG 5 cut(s) 840, 1077, 1607, 1850, 2015
Zsp2I ATGCAT 1 cut(s) 793
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.