Rw6G029640

breast cancer carboxy-terminal domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr6
OG0011125
Physical Location & Seq
Reverse (-)
53693588 .. 53697348
3761 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw6G029640.1

Sequence Viewer

Length: 2712 bp
ATGGCTGTTTCTCACGCCCAGACCCACACCTCTGATTCTCACTCTCACCCATCTGGGTTTAATAAACTCAAAGATGAAGATGATCAGAACCACCCCAAATTCCAAGACACCGAGCCCTTTGATGAGACTATGGTGCCTGATAGCCCATTAATGGAGGAAACCCAGTTGGTGGATGGTTCGGATTGCGATGACAAGATGAGGACTGGTCTGAGTGGGTTTGAGGATGAAGTGGTGCTTGACAGTGAGGATGAGGAAGTTAATGGAAGCCGAATAGTGACTGTTAGAAATTTGTCTTCGGATCGAATATGCGCTGCAGGGTTAAGCTACGTTGACTCTCAGGAACCAGGGGAGGAATCCCAAGCCAATGCACTTGATTTTGTGGATCATTTTGTGACGTTGAACGACGATCTTAGTTTTTATTCTCCAGGAACTGCCAACAGGAAAACCACTAAGGTGCAATCCCCTCCTGTTACAAACACAAAGGGGACTCATAGTTTGGCGAGGTTGGTTGAACTCAGGTCTCAAAATGAAAAAGCCAAAGCCTTTGAATGGGTTGATCCTGAGGAGAATGGAGCACTTCGTTTTTTAGACAAGAAGATGGAATCATCTTTGGTTAATCCTGAGGGCAAGGAGAGATCTGGTGTTGCAAGGAAAGAGAAAGTCAGGCATGCTAATCATACAAAATGTATTAGCTCAGGTGATGGGGGCAAAAAAGAGAGCAGCACAATTCGAAACCTCCATAAGGAAATCACAGAATCTGAAGGCAAGATTGAAAACGAGTCTGTCAATGCATCAGAAGATTATTTATATGCAAAACCAACAGAACTCCAGCTGGAACCTAGTGAGGAAGGAGCAAATATAGTTGACATGTTTGATATTGGTTTTAACACTCAAATTGCTGCCGAAGCTATGGAGGCCTTAGCATATGGGGGCCATCCTGGCTGCAATACTGCAGATGTTGGTTCAGGAGGTGCTAAAGAGAATACAGCTTCTTTGGAACATCGCTCTCCTCAAAAGAGTGATTTTTCTAATGTAGCAGGTATTAGCAAAAATGTAAACCAAAGAAACCGCTCCACTAGAGTACCAAGGAGAGCAGGTGCTTCATCTAAAAAACAATCTAAGAAGCAAGAGTTAGATCCTGATTTGGCGGCAGTAACAAATGTGAAGAGAAGCAGATTTTTTGGCGAGTCTTGTAGTAATTTTGCCGAGGCCAACAATAGTTTATGTATAGAATCTCCCAAGTCTGTCAAGAAAAGGAAGCTACAGAGTGCAGCTGATTATTCCAAGGTTTCTTCTTCTGGAAAACACCAGACTACCCAGTCAACGTCAGGGGTTAGGTCAAGAAGGACCGAGGATGCATCAAACAATGGTGTGGGGGATGGTATTGTTACATACAGAAGAAAGAACAGATGTTTAAAAGCTCAATCACCTGAAATGATCAGTAGTTCTGAGGCTGGATCAGACGAACCAGTAGAAAAGAAGAACAATGTTAAGAAGGACAACATTGTCACATACAGGAGAAAGAAGAGAATAGATGCAAAAGAAAGTCGTTCAGTTTATGTTTCATCGGAGGGAAATAGTAGCAGAGAAGCCTGTAGCTTAAAACTAAGTCTATGGAGTCATCCCAAAGGGAAAAGAACAGGTCGCAATGCTCGAAGCAATTCCTGCAGAGCTCCTGTTCCTTCTACTCCATTTCCACTACTTGACAAAAAGGACAGTTCCCATTCTGATGAAAGGCCAGAAAGCAGCAACAATATGGCGGGGAAAGAACAATCATCGTATTGCCCACCGGTGCTTTCCTTAGATAACGACTCTGACAGAACCTTGTTTGAATTGCAATCTGGTGAGCTAGTTGGGACAGATCCTATATCTTCTGGTACGGAATGTACTGCGCCATCTAACTCTACCACTGGCATAAATGTGGGATCATCCAAATATGTATCTCATGACTATCACAAAAAGCCATGCAACAAAAACTTTCCCAAATCACCTCTTATGAAAGAGCTTATTGGACTAGGTGTCCCTGAGTCGATGCCAGATTTTGCTTGGAAAGATTTGAGAAGGCGAAGAAGTATGGCCTATGTTCAAGTTCTGTTTAGCCAGCATTTGGATGATGATATCATTAAGCAGCAGAAAAAGATCATTGCACGACTGGGCCTATCCGTTGCTTCATGTTCTATGGATGCAACACACTTTATAGCAGATCAATTTGCACGTACAAGGAATATGTTGGAATTCATTGCTCTTGGTAAACCAGTGGTAACACATTTGTGGCTTGAGAGTTGTGGGGAAGCAAACTGTTTGATTAGTGAGAAAAGCTATATTCTGAGGGATGCCAAAAAGGAAAAGGAAATTGGTTTTAGCATGCTTGTTTCACTGGACTGTGCAAAACGGTGTCCGCTTCTAAAGGGTCGAAAAGTCTTCATTACTCCGAACATAAAACCTGGAAAAGAAATGATGACCAGCTTGGTGAAGACAGCTCAGGGCGAGCCAGTGGAGAAAGCTCAGATATCTGCCGCAAAGGGTAAAAAGATTTTCAATGAATTATTGATTCTTTCTTGTGAAGAAGATGAAGCAATCTGTCTACCTTTCCTTGAGAAAGGTGCAGCAGTTTACAGTTCAGAACTTTTACTAAATGGTATAGTTATCCAGAGACTGGAATACAAGAGACATCAGCTCTACACCAATGTCGTCAAGAAAGATCGGCCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RTT107_BRCT_5

Protein Analysis

903

Amino Acids

99.68

Weight (kDa)

7.51

Isoelectric Point (pI)

54.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BRCT_2 PF16589 800 - 888 1.8e-16 BRCT domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011125)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G03130 AT4G03130 AT4G03130 AT4G03130
fragaria_vesca FvH4_2g24660
malus_domestica MD11G1297400.v1.1 MD11G1297500.v1.1
prunus_persica Prupe.8G251900_v2.0.a1 Prupe.8G251900_v2.0.a1
pyrus_communis pycom11g26140
rosa_chinensis RchiOBHm_Chr6g0292491
rosa_laevigata RLG00000012019
rosa_multiflora Rmu_sc0001354.1_g000027
rosa_roxburghii Rroxscaffold_7G00175010
rosa_rugosa Rorug06G0227200
rosa_samantha Rh6AG340400 Rh6BG347700 Rh6CG354700 Rh6DG340500
rosa_wichuraiana Rw6G029640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1085
AasI GACNNNNNNGTC 2 cut(s) 1318, 1505
Acc36I ACCTGC 2 cut(s) 1028, 1085
AccB1I GGYRCC 1 cut(s) 133
AccB7I CCANNNNNTGG 3 cut(s) 169, 2107, 2656
AccBSI CCGCTC 1 cut(s) 1071
AccI GTMKAC 1 cut(s) 2584
AciI CCGC 5 cut(s) 1069, 1148, 1760, 2399, 2517
AclWI GGATC 7 cut(s) 306, 390, 551, 1130, 1465, 1856, 1933
AcsI RAATTY 3 cut(s) 98, 286, 2234
AcuI CTGAAG 1 cut(s) 780
AfaI GTAC 4 cut(s) 1083, 1879, 1888, 2218
AfiI CCNNNNNNNGG 6 cut(s) 151, 169, 549, 742, 2107, 2656
AflIII ACRYGT 1 cut(s) 867
AgeI ACCGGT 1 cut(s) 1789
AgsI TTSAA 7 cut(s) 400, 512, 548, 773, 1832, 2087, 2539
AhdI GACNNNNNGTC 1 cut(s) 2018
AjnI CCWGG 4 cut(s) 343, 424, 937, 2443
AjuI GAANNNNNNNTTGG 2 cut(s) 2337, 2369
AleI CACNNNNGTG 2 cut(s) 452, 2269
Alw21I GWGCWC 2 cut(s) 577, 1675
Alw26I GTCTC 4 cut(s) 119, 525, 2647, 2662
AlwI GGATC 7 cut(s) 306, 390, 551, 1130, 1465, 1856, 1933
AlwNI CAGNNNCTG 3 cut(s) 431, 758, 2656
AoxI GGCC 7 cut(s) 915, 931, 1209, 1736, 2076, 2155, 2705
ApeKI GCWGC 8 cut(s) 311, 720, 899, 942, 1271, 1746, 2128, 2606
ApoI RAATTY 3 cut(s) 98, 286, 2234
ArsI GACNNNNNNTTYG 2 cut(s) 478, 510
AseI ATTAAT 1 cut(s) 149
AsiGI ACCGGT 1 cut(s) 1789
Asp700I GAANNNNTTC 1 cut(s) 1660
AspLEI GCGC 2 cut(s) 311, 1894
AspS9I GGNCC 3 cut(s) 931, 1347, 2155
AsuHPI GGTGA 6 cut(s) 38, 710, 1419, 1856, 1980, 2482
AsuII TTCGAA 1 cut(s) 730
AvaII GGWCC 1 cut(s) 1347
AxyI CCTNAGG 2 cut(s) 561, 621
BaeI ACNNNNGTAYC 2 cut(s) 1065, 1098
BanI GGYRCC 1 cut(s) 133
BanII GRGCYC 2 cut(s) 117, 1675
BbsI GAAGAC 3 cut(s) 285, 2413, 2480
Bbv12I GWGCWC 2 cut(s) 577, 1675
BbvI GCAGC 8 cut(s) 298, 732, 886, 929, 1283, 1758, 2140, 2618
BccI CCATC 7 cut(s) 58, 167, 592, 695, 942, 1373, 1903
BciT130I CCWGG 4 cut(s) 345, 426, 939, 2445
BclI TGATCA 2 cut(s) 82, 1437
BcoDI GTCTC 4 cut(s) 119, 525, 2647, 2662
BfaI CTAG 4 cut(s) 840, 1077, 1850, 2015
BfmI CTRYAG 5 cut(s) 312, 951, 1262, 1594, 1666
BfuAI ACCTGC 2 cut(s) 1028, 1085
BglI GCCNNNNNGGC 1 cut(s) 939
BglII AGATCT 1 cut(s) 635
Bme1390I CCNGG 4 cut(s) 345, 426, 939, 2445
Bme18I GGWCC 1 cut(s) 1347
BmeRI GACNNNNNGTC 1 cut(s) 2018
BmgT120I GGNCC 3 cut(s) 931, 1347, 2155
BmiI GGNNCC 4 cut(s) 135, 342, 837, 932
BmrFI CCNGG 4 cut(s) 345, 426, 939, 2445
BmrI ACTGGG 3 cut(s) 157, 1312, 2162
BmsI GCATC 7 cut(s) 800, 1345, 1367, 1525, 2022, 2173, 2323
BmuI ACTGGG 3 cut(s) 157, 1312, 2162
BpiI GAAGAC 3 cut(s) 285, 2413, 2480
BpmI CTGGAG 2 cut(s) 408, 812
Bpu10I CCTNAGC 3 cut(s) 694, 919, 2481
Bpu14I TTCGAA 1 cut(s) 730
BpuEI CTTGAG 2 cut(s) 2297, 2615
BsaAI YACGTR 1 cut(s) 2216
BsaI GGTCTC 1 cut(s) 525
BsaJI CCNNGG 5 cut(s) 344, 1085, 1206, 1284, 1350
BsaWI WCCGGW 1 cut(s) 1789
BsaXI ACNNNNNCTCC 2 cut(s) 1081, 1111
Bsc4I CCNNNNNNNGG 6 cut(s) 151, 169, 549, 742, 2107, 2656
Bse118I RCCGGY 1 cut(s) 1789
Bse21I CCTNAGG 2 cut(s) 561, 621
Bse3DI GCAATG 3 cut(s) 1654, 2142, 2238
BseBI CCWGG 4 cut(s) 345, 426, 939, 2445
BseDI CCNNGG 5 cut(s) 344, 1085, 1206, 1284, 1350
BseLI CCNNNNNNNGG 6 cut(s) 151, 169, 549, 742, 2107, 2656
BseMI GCAATG 3 cut(s) 1654, 2142, 2238
BseRI GAGGAG 2 cut(s) 578, 999
BseXI GCAGC 8 cut(s) 298, 732, 886, 929, 1283, 1758, 2140, 2618
BsgI GTGCAG 2 cut(s) 1290, 2625
BshFI GGCC 7 cut(s) 917, 933, 1211, 1738, 2078, 2157, 2707
BshNI GGYRCC 1 cut(s) 133
BshTI ACCGGT 1 cut(s) 1789
BsiHKAI GWGCWC 2 cut(s) 577, 1675
BsiSI CCGG 1 cut(s) 1790
BslFI GGGAC 3 cut(s) 499, 1870, 2006
BslI CCNNNNNNNGG 6 cut(s) 151, 169, 549, 742, 2107, 2656
BsmAI GTCTC 4 cut(s) 119, 525, 2647, 2662
BsmFI GGGAC 3 cut(s) 499, 1870, 2006
BsnI GGCC 7 cut(s) 917, 933, 1211, 1738, 2078, 2157, 2707
Bso31I GGTCTC 1 cut(s) 525
Bsp119I TTCGAA 1 cut(s) 730
Bsp1286I GDGCHC 3 cut(s) 117, 577, 1675
BspACI CCGC 5 cut(s) 1069, 1148, 1760, 2399, 2517
BspANI GGCC 7 cut(s) 917, 933, 1211, 1738, 2078, 2157, 2707
BspHI TCATGA 1 cut(s) 1945
BspLI GGNNCC 4 cut(s) 135, 342, 837, 932
BspMAI CTGCAG 3 cut(s) 316, 955, 1670
BspMI ACCTGC 2 cut(s) 1028, 1085
BspPI GGATC 7 cut(s) 306, 390, 551, 1130, 1465, 1856, 1933
BspT104I TTCGAA 1 cut(s) 730
BspT107I GGYRCC 1 cut(s) 133
BspTNI GGTCTC 1 cut(s) 525
BsrBI CCGCTC 1 cut(s) 1071
BsrDI GCAATG 3 cut(s) 1654, 2142, 2238
BsrFI RCCGGY 1 cut(s) 1789
BssAI RCCGGY 1 cut(s) 1789
BssECI CCNNGG 5 cut(s) 344, 1085, 1206, 1284, 1350
BssT1I CCWWGG 2 cut(s) 1085, 1284
Bst2UI CCWGG 4 cut(s) 345, 426, 939, 2445
Bst4CI ACNGT 7 cut(s) 242, 280, 1718, 2300, 2384, 2394, 2618
Bst6I CTCTTC 2 cut(s) 1160, 1520
BstAPI GCANNNNNTGC 1 cut(s) 1665
BstBAI YACGTR 1 cut(s) 2216
BstBI TTCGAA 1 cut(s) 730
BstC8I GCNNGC 4 cut(s) 669, 2102, 2366, 2489
BstENI CCTNNNNNAGG 1 cut(s) 740
BstHHI GCGC 2 cut(s) 311, 1894
BstMAI GTCTC 4 cut(s) 119, 525, 2647, 2662
BstMWI GCNNNNNNNGC 4 cut(s) 905, 914, 939, 1665
BstNI CCWGG 4 cut(s) 345, 426, 939, 2445
BstNSI RCATGY 3 cut(s) 671, 871, 2368
BstSCI CCNGG 4 cut(s) 343, 424, 937, 2443
BstSFI CTRYAG 5 cut(s) 312, 951, 1262, 1594, 1666
BstV1I GCAGC 8 cut(s) 298, 732, 886, 929, 1283, 1758, 2140, 2618
BstV2I GAAGAC 3 cut(s) 285, 2413, 2480
BstX2I RGATCY 3 cut(s) 635, 1135, 1861
BstYI RGATCY 3 cut(s) 635, 1135, 1861
Bsu36I CCTNAGG 2 cut(s) 561, 621
BsuRI GGCC 7 cut(s) 917, 933, 1211, 1738, 2078, 2157, 2707
BtgZI GCGATG 2 cut(s) 201, 986
BtsIMutI CAGTG 5 cut(s) 247, 1908, 2262, 2375, 2499
BveI ACCTGC 2 cut(s) 1028, 1085
Cac8I GCNNGC 4 cut(s) 669, 2102, 2366, 2489
CaiI CAGNNNCTG 3 cut(s) 431, 758, 2656
CciI TCATGA 1 cut(s) 1945
CfoI GCGC 2 cut(s) 311, 1894
Cfr10I RCCGGY 1 cut(s) 1789
Cfr13I GGNCC 3 cut(s) 931, 1347, 2155
Csp6I GTAC 4 cut(s) 1082, 1878, 1887, 2217
CspAI ACCGGT 1 cut(s) 1789
CviAII CATG 6 cut(s) 668, 868, 1946, 1965, 2172, 2365
CviQI GTAC 4 cut(s) 1082, 1878, 1887, 2217
DraI TTTAAA 1 cut(s) 1416
DrdI GACNNNNNNGTC 2 cut(s) 1318, 1505
DriI GACNNNNNGTC 1 cut(s) 2018
DseDI GACNNNNNNGTC 2 cut(s) 1318, 1505
Eam1104I CTCTTC 2 cut(s) 1160, 1520
Eam1105I GACNNNNNGTC 1 cut(s) 2018
EarI CTCTTC 2 cut(s) 1160, 1520
Ecl136II GAGCTC 1 cut(s) 1673
Eco130I CCWWGG 2 cut(s) 1085, 1284
Eco147I AGGCCT 1 cut(s) 917
Eco24I GRGCYC 2 cut(s) 117, 1675
Eco31I GGTCTC 1 cut(s) 525
Eco32I GATATC 2 cut(s) 2119, 2511
Eco47I GGWCC 1 cut(s) 1347
Eco53kI GAGCTC 1 cut(s) 1673
Eco57I CTGAAG 1 cut(s) 780
Eco81I CCTNAGG 2 cut(s) 561, 621
EcoICRI GAGCTC 1 cut(s) 1673
EcoNI CCTNNNNNAGG 1 cut(s) 740
EcoRI GAATTC 1 cut(s) 2234
EcoRII CCWGG 4 cut(s) 343, 424, 937, 2443
EcoRV GATATC 2 cut(s) 2119, 2511
EcoT14I CCWWGG 2 cut(s) 1085, 1284
EcoT22I ATGCAT 2 cut(s) 793, 1360
EcoT38I GRGCYC 2 cut(s) 117, 1675
ErhI CCWWGG 2 cut(s) 1085, 1284
FaeI CATG 6 cut(s) 671, 871, 1949, 1968, 2175, 2368
FalI AAGNNNNNCTT 2 cut(s) 219, 251
FaqI GGGAC 3 cut(s) 499, 1870, 2006
FatI CATG 6 cut(s) 667, 867, 1945, 1964, 2171, 2364
FauI CCCGC 1 cut(s) 1753
FauNDI CATATG 1 cut(s) 925
FbaI TGATCA 2 cut(s) 82, 1437
FblI GTMKAC 1 cut(s) 2584
FriOI GRGCYC 2 cut(s) 117, 1675
FspBI CTAG 4 cut(s) 840, 1077, 1850, 2015
GlaI GCGC 2 cut(s) 310, 1893
GsuI CTGGAG 2 cut(s) 408, 812
HaeIII GGCC 7 cut(s) 917, 933, 1211, 1738, 2078, 2157, 2707
HapII CCGG 1 cut(s) 1790
HhaI GCGC 2 cut(s) 311, 1894
Hin1II CATG 6 cut(s) 671, 871, 1949, 1968, 2175, 2368
Hin6I GCGC 2 cut(s) 309, 1892
HinP1I GCGC 2 cut(s) 309, 1892
HincII GTYRAC 3 cut(s) 331, 865, 1323
HindII GTYRAC 3 cut(s) 331, 865, 1323
HpaII CCGG 1 cut(s) 1790
HphI GGTGA 6 cut(s) 38, 710, 1419, 1856, 1980, 2482
Hpy166II GTNNAC 7 cut(s) 331, 865, 1057, 1323, 2252, 2585, 2614
Hpy8I GTNNAC 7 cut(s) 331, 865, 1057, 1323, 2252, 2585, 2614
Hpy99I CGWCG 1 cut(s) 407
HpyAV CCTTC 6 cut(s) 755, 842, 1338, 1489, 1692, 2055
HpyCH4III ACNGT 7 cut(s) 242, 280, 1718, 2300, 2384, 2394, 2618
HpyCH4IV ACGT 4 cut(s) 327, 395, 1325, 2215
HpyF10VI GCNNNNNNNGC 4 cut(s) 905, 914, 939, 1665
HpySE526I ACGT 4 cut(s) 327, 395, 1325, 2215
Hsp92II CATG 6 cut(s) 671, 871, 1949, 1968, 2175, 2368
HspAI GCGC 2 cut(s) 309, 1892
Ksp22I TGATCA 2 cut(s) 82, 1437
LmnI GCTCC 4 cut(s) 572, 851, 1076, 1678
Lsp1109I GCAGC 8 cut(s) 298, 732, 886, 929, 1283, 1758, 2140, 2618
LweI GCATC 7 cut(s) 800, 1345, 1367, 1525, 2022, 2173, 2323
MaeI CTAG 4 cut(s) 840, 1077, 1850, 2015
MaeII ACGT 4 cut(s) 327, 395, 1325, 2215
MaeIII GTNAC 7 cut(s) 274, 391, 469, 1153, 1387, 1507, 2260
MbiI CCGCTC 1 cut(s) 1071
MflI RGATCY 3 cut(s) 635, 1135, 1861
MhlI GDGCHC 3 cut(s) 117, 577, 1675
MlyI GAGTC 7 cut(s) 326, 481, 788, 1196, 1627, 1805, 2036
MmeI TCCRAC 1 cut(s) 2211
Mph1103I ATGCAT 2 cut(s) 793, 1360
MroXI GAANNNNTTC 1 cut(s) 1660
MslI CAYNNNNRTG 5 cut(s) 452, 1728, 1919, 2109, 2269
MspA1I CMGCKG 2 cut(s) 832, 1274
MspI CCGG 1 cut(s) 1790
MspR9I CCNGG 4 cut(s) 345, 426, 939, 2445
MvaI CCWGG 4 cut(s) 345, 426, 939, 2445
MwoI GCNNNNNNNGC 4 cut(s) 905, 914, 939, 1665
NdeI CATATG 1 cut(s) 925
NlaIII CATG 6 cut(s) 671, 871, 1949, 1968, 2175, 2368
NlaIV GGNNCC 4 cut(s) 135, 342, 837, 932
NmeAIII GCCGAG 1 cut(s) 1231
NmuCI GTSAC 3 cut(s) 274, 391, 1507
NsiI ATGCAT 2 cut(s) 793, 1360
NspI RCATGY 3 cut(s) 671, 871, 2368
NspV TTCGAA 1 cut(s) 730
OliI CACNNNNGTG 2 cut(s) 452, 2269
PaeI GCATGC 2 cut(s) 671, 2368
PagI TCATGA 1 cut(s) 1945
PaqCI CACCTGC 1 cut(s) 1085
PceI AGGCCT 1 cut(s) 917
PciI ACATGT 1 cut(s) 867
PcsI WCGNNNNNNNCGW 1 cut(s) 1651
PdmI GAANNNNTTC 1 cut(s) 1660
PfeI GAWTC 6 cut(s) 35, 353, 602, 755, 1232, 2551
PflMI CCANNNNNTGG 3 cut(s) 169, 2107, 2656
PfoI TCCNGGA 1 cut(s) 424
PinAI ACCGGT 1 cut(s) 1789
PleI GAGTC 7 cut(s) 326, 481, 787, 1195, 1626, 1805, 2035
PpsI GAGTC 7 cut(s) 326, 481, 787, 1195, 1626, 1805, 2035
Ppu21I YACGTR 1 cut(s) 2216
PscI ACATGT 1 cut(s) 867
PshBI ATTAAT 1 cut(s) 149
Psp124BI GAGCTC 1 cut(s) 1675
Psp6I CCWGG 4 cut(s) 343, 424, 937, 2443
PspGI CCWGG 4 cut(s) 343, 424, 937, 2443
PspN4I GGNNCC 4 cut(s) 135, 342, 837, 932
PspPI GGNCC 3 cut(s) 931, 1347, 2155
PstI CTGCAG 3 cut(s) 316, 955, 1670
PstNI CAGNNNCTG 3 cut(s) 431, 758, 2656
PsuI RGATCY 3 cut(s) 635, 1135, 1861
PvuII CAGCTG 2 cut(s) 832, 1274
RsaI GTAC 4 cut(s) 1083, 1879, 1888, 2218
RsaNI GTAC 4 cut(s) 1082, 1878, 1887, 2217
RseI CAYNNNNRTG 5 cut(s) 452, 1728, 1919, 2109, 2269
SacI GAGCTC 1 cut(s) 1675
Sau96I GGNCC 3 cut(s) 931, 1347, 2155
SchI GAGTC 7 cut(s) 326, 481, 788, 1196, 1627, 1805, 2036
ScrFI CCNGG 4 cut(s) 345, 426, 939, 2445
SduI GDGCHC 3 cut(s) 117, 577, 1675
SfaNI GCATC 7 cut(s) 800, 1345, 1367, 1525, 2022, 2173, 2323
SfcI CTRYAG 5 cut(s) 312, 951, 1262, 1594, 1666
SfuI TTCGAA 1 cut(s) 730
SgrAI CRCCGGYG 1 cut(s) 1789
SinI GGWCC 1 cut(s) 1347
SmiMI CAYNNNNRTG 5 cut(s) 452, 1728, 1919, 2109, 2269
SmlI CTYRAG 2 cut(s) 2276, 2594
SmoI CTYRAG 2 cut(s) 2276, 2594
SphI GCATGC 2 cut(s) 671, 2368
SseBI AGGCCT 1 cut(s) 917
SsiI CCGC 5 cut(s) 1069, 1148, 1760, 2399, 2517
SspMI CTAG 4 cut(s) 840, 1077, 1850, 2015
SstI GAGCTC 1 cut(s) 1675
StuI AGGCCT 1 cut(s) 917
StyD4I CCNGG 4 cut(s) 343, 424, 937, 2443
StyI CCWWGG 2 cut(s) 1085, 1284
TaaI ACNGT 7 cut(s) 242, 280, 1718, 2300, 2384, 2394, 2618
TaiI ACGT 4 cut(s) 330, 398, 1328, 2218
TaqI TCGA 5 cut(s) 301, 730, 1654, 2030, 2413
TaqII GACCGA 1 cut(s) 1364
TatI WGTACW 1 cut(s) 1886
TauI GCSGC 2 cut(s) 1151, 2519
TfiI GAWTC 6 cut(s) 35, 353, 602, 755, 1232, 2551
TscAI CASTG 5 cut(s) 247, 1915, 2262, 2382, 2499
TseFI GTSAC 3 cut(s) 274, 391, 1507
TseI GCWGC 8 cut(s) 311, 720, 899, 942, 1271, 1746, 2128, 2606
Tsp45I GTSAC 3 cut(s) 274, 391, 1507
TspGWI ACGGA 2 cut(s) 1895, 2152
TspRI CASTG 5 cut(s) 247, 1915, 2262, 2382, 2499
Van91I CCANNNNNTGG 3 cut(s) 169, 2107, 2656
VpaK11BI GGWCC 1 cut(s) 1347
VspI ATTAAT 1 cut(s) 149
XagI CCTNNNNNAGG 1 cut(s) 740
XapI RAATTY 3 cut(s) 98, 286, 2234
XceI RCATGY 3 cut(s) 671, 871, 2368
XcmI CCANNNNNNNNNTGG 2 cut(s) 170, 2043
XmiI GTMKAC 1 cut(s) 2584
XmnI GAANNNNTTC 1 cut(s) 1660
XspI CTAG 4 cut(s) 840, 1077, 1850, 2015
Zsp2I ATGCAT 2 cut(s) 793, 1360
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.