RchiOBHm_Chr6g0292491

breast cancer carboxy-terminal domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0011125
Physical Location & Seq
Reverse (-)
55361238 .. 55365211
3974 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ26248

Sequence Viewer

Length: 2676 bp
ATGTCTGTTTCTCACGCCCAGACCCACACCTCTGATTCTCACTCTCACCCATCTGGGTTTAATAATGAAGATGATCAGAGCCACCCCAAATTCCAAGACACCGAGCCCTTTGATGAGACTATGGAGCCTGATAGCCCATTAATGGAGGAAACCCAGTTGGTGGATGGTTCGGATTGCGATGACAAGATGAGGACTGGTATGAGTGGGTTTGAGGATGAAGTGGTGCTTGACAGTGAGGATGAGGAAGTTAATGGAAGCCGAATAGTGACTGTTAGAAATTTGTCTTTGGATCGAATATGCGCTGCCGGGTTAAGCTACGTTGACTCTCAGGAACCAGGGGAGGAATCCCAAGCCAATGCACTTGATTTTGTGGATCATTTTGTGACGTTGAACGACGATCTTAGTTTTTATTCTCCAGGAACTGCCAACAGGAAAACCACTAAGGTGCAATCCCCTCCTGTTACAAACACAAAGGGGACTCATAGTTTGGCGAGGTTGGTTGAACTCAGGTCTCAAAATGAAAAAGCCAAAGCCTTTGAATGGGTTGATCCTGAGGAGAATGGAGCACTTCGTTTTTTAGACAAGAAGATGGAATCATCTTTGGTTAATCCTGAGGGCAAGGAGAGATCTGGTGTTGCAAGGAAAGAGAAAGTCAGGCATGCTAATGATACAAAATGTATTAGCTCAGGTGATGGGGGCAAAAAAGAGAGGAGCACAATTCGAAACCTCCATAAGGAAATCACAGAATCTGAAGGCAAGATTGAAAACGAGTCTGTCAATGCATCAGAACTCCAGCTGGAACCTAGTGAGGAAGGAGCAAATATAGTTGACATGTTTGATATTGGTTTTAACACTCAAATTGCTGCCGAAGCTATGGAGGCCTTAGCATATGGGGCCCATCCTGGCTGCAATACTGCAGATGTTGGTTCAGGAGGTGCTAAAGAGAATACAGCTTCTTTGGAACATCGCTCTCCTCAAAAGAGTGATTTTTCTAATGTAGCAGGTATTAGCAAAAATTTAAACCGAAGAAACCGCTCCACTAGAGTACCAAGGAGAGCAGGTGCTTCATCTAAAAAACAATCTAAGAAGCAAGAGTTAGATCCTGATTTGGCAGCAGTAACAAATGTGAAGAGAAGCAGATTTTTTGGCGAGTCTTGTAGTAATTTTGCCGAGGCCAACGATAGTTTATGTATAGAATCTCCCAAGTCTGTCAAGAAAAGGAAGCTACAGAGTGCAGCTGATTATTCCAAGGTTTCTTCTTCTGGAAAACACCAGACTACCCAGTCAACGTCAGGGGGTAGGTCAAGAAGGACCGAGGATGGATCAAACAATGGTGTGGGGGATGGTATTGTTACATACAGAAGAAAGAAGAGATGTTTAAAAGCTCAATCACCTGAAATGATCAGTAGTTCTGAGGCTGGATCAGACGAGCCAGTAGAAAAGAAGAACAATGTTAAGAAGGACAACATTGTCACATACAGGAGAAAGAAGAGAATAGATGCAAAAGAAAGTCGTTCAGTTTATGTTTCATCGGAGGGAAATAGTAGCAGAGAAGCCTGTAGCTTAAAACTAGGTCTATGGAGTCATCCCAAAGGGAAAAGAACAGGTCGCAATGCTCGAAGCAATTCCTGCAGAGCTCCTGTTCCTTCTACTCCATTTCCACTACTTGACAAAAAGGACAGTTCCCATTCTGATGAAAGGCCAGAAAGCAGCAACAATATGGCGGGGAAAGAACAATCATCGTATTGCCCACCGGTGCTTTCCTTAGATAACGACTCTGACAGAACCTTGTTTGAATTGGAATCTGGCGAGCTAGTTGGGACAGATCCCACATCTTCTGGTACTGAATGTACTGCGCCGTCTAACTCTACCACTGGCATAAATGTGGGATCATCCAAATATGTATCTCATGACTATCACAAAAAGCCATGCAACAAAAACTTTCCCAAATCACCTCTTATGAAAGAGCTTATTGGACTAGGTGTCCCTGAGTCGATGCCAGATTTTGCTTGGAAAGATTTGAGAAGGCGAAGAAGTATGGCCTATGTTCAAGTTCTGTTTAGCCAGCATTTGGATGATGATATCATTAAGCAGCAGAAAAAGATCATTGCACGACTGGGCCTATCCGTTGCTTCATGTTCTATGGATGCAACACACTTTATAGCAGATCAATTTGCACGTACAAGGAATATGTTGGAATTCATTGCTCTTGGTAAACCAGTGGTAACACATTTGTGGCTTGAGAGTTGTGGGGAAGCAAACTGTTTGATTAGTGAGAAAAGCTATATTCTGAGGGATGCCAAAAAGGAAAAGGAAATTGGTTTTAACATGCTTGTTTCACTGGACTGTGCAAAACGGTGTCCGCTTCTAAAGGGTCGAAAAGTCTTCATTACTCCGAACATAAAACCTGGAAAAGAAATGATGACCAGCTTGGTGAAGACAGCTCAGGGCGAGCCAGTGGAGAAAGCTCAGATATCTGCCGCAAAGGGTAAAAAGATTTTCAATGAATTATTGATTCTTTCTTGTGAAGAAGATGAAGCAATCTGTCTACCTTTCCTTGAGAAAGGTGCAGCAGTTTACAGTTCAGAACTTTTACTAAATGGTATAGTTATCCAGAGACTGGAATACAAGAGACATCAGCTCTTCACCAATGTCGTCAAGAAAGATCGGCCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RTT107_BRCT_5

Protein Analysis

891

Amino Acids

98.32

Weight (kDa)

7.26

Isoelectric Point (pI)

56.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BRCT_2 PF16589 788 - 876 1.8e-16 BRCT domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011125)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G03130 AT4G03130 AT4G03130 AT4G03130
fragaria_vesca FvH4_2g24660
malus_domestica MD11G1297400.v1.1 MD11G1297500.v1.1
prunus_persica Prupe.8G251900_v2.0.a1 Prupe.8G251900_v2.0.a1
pyrus_communis pycom11g26140
rosa_chinensis RchiOBHm_Chr6g0292491
rosa_laevigata RLG00000012019
rosa_multiflora Rmu_sc0001354.1_g000027
rosa_roxburghii Rroxscaffold_7G00175010
rosa_rugosa Rorug06G0227200
rosa_samantha Rh6AG340400 Rh6BG347700 Rh6CG354700 Rh6DG340500
rosa_wichuraiana Rw6G029640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1049
AasI GACNNNNNNGTC 2 cut(s) 1282, 1469
Acc36I ACCTGC 2 cut(s) 992, 1049
AccB7I CCANNNNNTGG 3 cut(s) 160, 2071, 2620
AccBSI CCGCTC 1 cut(s) 1035
AccI GTMKAC 1 cut(s) 2548
AciI CCGC 4 cut(s) 1033, 1724, 2363, 2481
AclWI GGATC 8 cut(s) 297, 381, 542, 1094, 1330, 1429, 1820, 1897
AcsI RAATTY 4 cut(s) 89, 277, 1015, 2198
AcuI CTGAAG 1 cut(s) 771
AfaI GTAC 4 cut(s) 1047, 1843, 1852, 2182
AfiI CCNNNNNNNGG 6 cut(s) 142, 160, 540, 733, 2071, 2620
AflIII ACRYGT 1 cut(s) 831
AgeI ACCGGT 1 cut(s) 1753
AgsI TTSAA 7 cut(s) 391, 503, 539, 764, 1796, 2051, 2503
AhdI GACNNNNNGTC 1 cut(s) 1982
AjnI CCWGG 4 cut(s) 334, 415, 901, 2407
AjuI GAANNNNNNNTTGG 2 cut(s) 2301, 2333
AleI CACNNNNGTG 2 cut(s) 443, 2233
Alw21I GWGCWC 3 cut(s) 568, 716, 1639
Alw26I GTCTC 4 cut(s) 110, 516, 2611, 2626
AlwI GGATC 8 cut(s) 297, 381, 542, 1094, 1330, 1429, 1820, 1897
AlwNI CAGNNNCTG 3 cut(s) 422, 749, 2620
AoxI GGCC 7 cut(s) 879, 894, 1173, 1700, 2040, 2119, 2669
ApaI GGGCCC 1 cut(s) 898
ApeKI GCWGC 8 cut(s) 302, 863, 906, 1112, 1235, 1710, 2092, 2570
ApoI RAATTY 4 cut(s) 89, 277, 1015, 2198
ArsI GACNNNNNNTTYG 2 cut(s) 469, 501
AseI ATTAAT 1 cut(s) 140
AsiGI ACCGGT 1 cut(s) 1753
Asp700I GAANNNNTTC 1 cut(s) 1624
AspLEI GCGC 2 cut(s) 302, 1858
AspS9I GGNCC 4 cut(s) 894, 895, 1311, 2119
AsuC2I CCSGG 1 cut(s) 307
AsuHPI GGTGA 6 cut(s) 38, 701, 1383, 1944, 2446, 2638
AsuII TTCGAA 1 cut(s) 721
AvaII GGWCC 1 cut(s) 1311
AxyI CCTNAGG 2 cut(s) 552, 612
BaeGI GKGCMC 1 cut(s) 898
BaeI ACNNNNGTAYC 2 cut(s) 1029, 1062
BanII GRGCYC 3 cut(s) 108, 898, 1639
BbsI GAAGAC 2 cut(s) 2377, 2444
Bbv12I GWGCWC 3 cut(s) 568, 716, 1639
BbvI GCAGC 8 cut(s) 289, 850, 893, 1124, 1247, 1722, 2104, 2582
BccI CCATC 7 cut(s) 58, 158, 583, 686, 906, 1313, 1337
BceAI ACGGC 1 cut(s) 1843
BciT130I CCWGG 4 cut(s) 336, 417, 903, 2409
BclI TGATCA 2 cut(s) 73, 1401
BcnI CCSGG 1 cut(s) 307
BcoDI GTCTC 4 cut(s) 110, 516, 2611, 2626
BfaI CTAG 5 cut(s) 804, 1041, 1571, 1814, 1979
BfmI CTRYAG 4 cut(s) 915, 1226, 1558, 1630
BfuAI ACCTGC 2 cut(s) 992, 1049
BglII AGATCT 1 cut(s) 626
BisI GCNGC 9 cut(s) 303, 864, 907, 1113, 1236, 1711, 2093, 2481, 2571
BlsI GCNGC 9 cut(s) 304, 865, 908, 1114, 1237, 1712, 2094, 2482, 2572
Bme1390I CCNGG 5 cut(s) 307, 336, 417, 903, 2409
Bme18I GGWCC 1 cut(s) 1311
BmeRI GACNNNNNGTC 1 cut(s) 1982
BmgT120I GGNCC 4 cut(s) 894, 895, 1311, 2119
BmiI GGNNCC 5 cut(s) 126, 333, 801, 895, 896
BmrFI CCNGG 5 cut(s) 307, 336, 417, 903, 2409
BmrI ACTGGG 3 cut(s) 148, 1276, 2126
BmsI GCATC 5 cut(s) 791, 1489, 1986, 2137, 2287
BmuI ACTGGG 3 cut(s) 148, 1276, 2126
BpiI GAAGAC 2 cut(s) 2377, 2444
BpmI CTGGAG 2 cut(s) 399, 776
Bpu10I CCTNAGC 3 cut(s) 685, 883, 2445
Bpu14I TTCGAA 1 cut(s) 721
BpuEI CTTGAG 2 cut(s) 2261, 2579
BpuMI CCSGG 1 cut(s) 307
BsaAI YACGTR 1 cut(s) 2180
BsaI GGTCTC 1 cut(s) 516
BsaJI CCNNGG 5 cut(s) 335, 1049, 1170, 1248, 1314
BsaWI WCCGGW 1 cut(s) 1753
BsaXI ACNNNNNCTCC 2 cut(s) 1045, 1075
Bsc4I CCNNNNNNNGG 6 cut(s) 142, 160, 540, 733, 2071, 2620
Bse118I RCCGGY 1 cut(s) 1753
Bse21I CCTNAGG 2 cut(s) 552, 612
Bse3DI GCAATG 3 cut(s) 1618, 2106, 2202
BseBI CCWGG 4 cut(s) 336, 417, 903, 2409
BseDI CCNNGG 5 cut(s) 335, 1049, 1170, 1248, 1314
BseLI CCNNNNNNNGG 6 cut(s) 142, 160, 540, 733, 2071, 2620
BseMI GCAATG 3 cut(s) 1618, 2106, 2202
BseRI GAGGAG 3 cut(s) 569, 724, 963
BseSI GKGCMC 1 cut(s) 898
BseXI GCAGC 8 cut(s) 289, 850, 893, 1124, 1247, 1722, 2104, 2582
BsgI GTGCAG 2 cut(s) 1254, 2589
BshFI GGCC 7 cut(s) 881, 896, 1175, 1702, 2042, 2121, 2671
BshTI ACCGGT 1 cut(s) 1753
BsiHKAI GWGCWC 3 cut(s) 568, 716, 1639
BsiSI CCGG 2 cut(s) 306, 1754
BslFI GGGAC 3 cut(s) 490, 1834, 1970
BslI CCNNNNNNNGG 6 cut(s) 142, 160, 540, 733, 2071, 2620
BsmAI GTCTC 4 cut(s) 110, 516, 2611, 2626
BsmFI GGGAC 3 cut(s) 490, 1834, 1970
BsnI GGCC 7 cut(s) 881, 896, 1175, 1702, 2042, 2121, 2671
Bso31I GGTCTC 1 cut(s) 516
Bsp119I TTCGAA 1 cut(s) 721
Bsp120I GGGCCC 1 cut(s) 894
Bsp1286I GDGCHC 5 cut(s) 108, 568, 716, 898, 1639
BspACI CCGC 4 cut(s) 1033, 1724, 2363, 2481
BspANI GGCC 7 cut(s) 881, 896, 1175, 1702, 2042, 2121, 2671
BspHI TCATGA 1 cut(s) 1909
BspLI GGNNCC 5 cut(s) 126, 333, 801, 895, 896
BspMAI CTGCAG 2 cut(s) 919, 1634
BspMI ACCTGC 2 cut(s) 992, 1049
BspPI GGATC 8 cut(s) 297, 381, 542, 1094, 1330, 1429, 1820, 1897
BspQI GCTCTTC 1 cut(s) 2648
BspT104I TTCGAA 1 cut(s) 721
BspTNI GGTCTC 1 cut(s) 516
BsrBI CCGCTC 1 cut(s) 1035
BsrDI GCAATG 3 cut(s) 1618, 2106, 2202
BsrFI RCCGGY 1 cut(s) 1753
BssAI RCCGGY 1 cut(s) 1753
BssECI CCNNGG 5 cut(s) 335, 1049, 1170, 1248, 1314
BssT1I CCWWGG 2 cut(s) 1049, 1248
Bst2UI CCWGG 4 cut(s) 336, 417, 903, 2409
Bst4CI ACNGT 7 cut(s) 233, 271, 1682, 2264, 2348, 2358, 2582
Bst6I CTCTTC 4 cut(s) 1124, 1364, 1484, 2648
BstAPI GCANNNNNTGC 1 cut(s) 1629
BstBAI YACGTR 1 cut(s) 2180
BstBI TTCGAA 1 cut(s) 721
BstC8I GCNNGC 4 cut(s) 660, 1811, 2066, 2453
BstENI CCTNNNNNAGG 1 cut(s) 731
BstHHI GCGC 2 cut(s) 302, 1858
BstMAI GTCTC 4 cut(s) 110, 516, 2611, 2626
BstMWI GCNNNNNNNGC 4 cut(s) 869, 878, 893, 1629
BstNI CCWGG 4 cut(s) 336, 417, 903, 2409
BstNSI RCATGY 3 cut(s) 662, 835, 2332
BstSCI CCNGG 5 cut(s) 305, 334, 415, 901, 2407
BstSFI CTRYAG 4 cut(s) 915, 1226, 1558, 1630
BstSLI GKGCMC 1 cut(s) 898
BstV1I GCAGC 8 cut(s) 289, 850, 893, 1124, 1247, 1722, 2104, 2582
BstV2I GAAGAC 2 cut(s) 2377, 2444
BstX2I RGATCY 3 cut(s) 626, 1099, 1825
BstYI RGATCY 3 cut(s) 626, 1099, 1825
Bsu36I CCTNAGG 2 cut(s) 552, 612
BsuRI GGCC 7 cut(s) 881, 896, 1175, 1702, 2042, 2121, 2671
BtgZI GCGATG 2 cut(s) 192, 950
BtsIMutI CAGTG 5 cut(s) 238, 1872, 2226, 2339, 2463
BveI ACCTGC 2 cut(s) 992, 1049
Cac8I GCNNGC 4 cut(s) 660, 1811, 2066, 2453
CaiI CAGNNNCTG 3 cut(s) 422, 749, 2620
CciI TCATGA 1 cut(s) 1909
CfoI GCGC 2 cut(s) 302, 1858
Cfr10I RCCGGY 1 cut(s) 1753
Cfr13I GGNCC 4 cut(s) 894, 895, 1311, 2119
Csp6I GTAC 4 cut(s) 1046, 1842, 1851, 2181
CspAI ACCGGT 1 cut(s) 1753
CviAII CATG 6 cut(s) 659, 832, 1910, 1929, 2136, 2329
CviQI GTAC 4 cut(s) 1046, 1842, 1851, 2181
DraI TTTAAA 2 cut(s) 1020, 1380
DrdI GACNNNNNNGTC 2 cut(s) 1282, 1469
DriI GACNNNNNGTC 1 cut(s) 1982
DseDI GACNNNNNNGTC 2 cut(s) 1282, 1469
Eam1104I CTCTTC 4 cut(s) 1124, 1364, 1484, 2648
Eam1105I GACNNNNNGTC 1 cut(s) 1982
EarI CTCTTC 4 cut(s) 1124, 1364, 1484, 2648
Ecl136II GAGCTC 1 cut(s) 1637
Eco130I CCWWGG 2 cut(s) 1049, 1248
Eco147I AGGCCT 1 cut(s) 881
Eco24I GRGCYC 3 cut(s) 108, 898, 1639
Eco31I GGTCTC 1 cut(s) 516
Eco32I GATATC 2 cut(s) 2083, 2475
Eco47I GGWCC 1 cut(s) 1311
Eco53kI GAGCTC 1 cut(s) 1637
Eco57I CTGAAG 1 cut(s) 771
Eco81I CCTNAGG 2 cut(s) 552, 612
EcoICRI GAGCTC 1 cut(s) 1637
EcoNI CCTNNNNNAGG 1 cut(s) 731
EcoO109I RGGNCCY 1 cut(s) 894
EcoRI GAATTC 1 cut(s) 2198
EcoRII CCWGG 4 cut(s) 334, 415, 901, 2407
EcoRV GATATC 2 cut(s) 2083, 2475
EcoT14I CCWWGG 2 cut(s) 1049, 1248
EcoT22I ATGCAT 1 cut(s) 784
EcoT38I GRGCYC 3 cut(s) 108, 898, 1639
ErhI CCWWGG 2 cut(s) 1049, 1248
FaeI CATG 6 cut(s) 662, 835, 1913, 1932, 2139, 2332
FalI AAGNNNNNCTT 2 cut(s) 210, 242
FaqI GGGAC 3 cut(s) 490, 1834, 1970
FatI CATG 6 cut(s) 658, 831, 1909, 1928, 2135, 2328
FauI CCCGC 1 cut(s) 1717
FauNDI CATATG 1 cut(s) 889
FbaI TGATCA 2 cut(s) 73, 1401
FblI GTMKAC 1 cut(s) 2548
Fnu4HI GCNGC 9 cut(s) 303, 864, 907, 1113, 1236, 1711, 2093, 2481, 2571
FriOI GRGCYC 3 cut(s) 108, 898, 1639
Fsp4HI GCNGC 9 cut(s) 303, 864, 907, 1113, 1236, 1711, 2093, 2481, 2571
FspBI CTAG 5 cut(s) 804, 1041, 1571, 1814, 1979
GlaI GCGC 2 cut(s) 301, 1857
GluI GCNGC 9 cut(s) 303, 864, 907, 1113, 1236, 1711, 2093, 2481, 2571
GsuI CTGGAG 2 cut(s) 399, 776
HaeIII GGCC 7 cut(s) 881, 896, 1175, 1702, 2042, 2121, 2671
HapII CCGG 2 cut(s) 306, 1754
HhaI GCGC 2 cut(s) 302, 1858
Hin1II CATG 6 cut(s) 662, 835, 1913, 1932, 2139, 2332
Hin6I GCGC 2 cut(s) 300, 1856
HinP1I GCGC 2 cut(s) 300, 1856
HincII GTYRAC 3 cut(s) 322, 829, 1287
HindII GTYRAC 3 cut(s) 322, 829, 1287
HpaII CCGG 2 cut(s) 306, 1754
HphI GGTGA 6 cut(s) 38, 701, 1383, 1944, 2446, 2638
Hpy166II GTNNAC 6 cut(s) 322, 829, 1287, 2216, 2549, 2578
Hpy8I GTNNAC 6 cut(s) 322, 829, 1287, 2216, 2549, 2578
Hpy99I CGWCG 1 cut(s) 398
HpyAV CCTTC 6 cut(s) 746, 806, 1302, 1453, 1656, 2019
HpyCH4III ACNGT 7 cut(s) 233, 271, 1682, 2264, 2348, 2358, 2582
HpyCH4IV ACGT 4 cut(s) 318, 386, 1289, 2179
HpyF10VI GCNNNNNNNGC 4 cut(s) 869, 878, 893, 1629
HpySE526I ACGT 4 cut(s) 318, 386, 1289, 2179
Hsp92II CATG 6 cut(s) 662, 835, 1913, 1932, 2139, 2332
HspAI GCGC 2 cut(s) 300, 1856
Ksp22I TGATCA 2 cut(s) 73, 1401
LguI GCTCTTC 1 cut(s) 2648
LmnI GCTCC 6 cut(s) 124, 563, 711, 815, 1040, 1642
Lsp1109I GCAGC 8 cut(s) 289, 850, 893, 1124, 1247, 1722, 2104, 2582
LweI GCATC 5 cut(s) 791, 1489, 1986, 2137, 2287
MaeI CTAG 5 cut(s) 804, 1041, 1571, 1814, 1979
MaeII ACGT 4 cut(s) 318, 386, 1289, 2179
MaeIII GTNAC 7 cut(s) 265, 382, 460, 1117, 1351, 1471, 2224
MbiI CCGCTC 1 cut(s) 1035
MflI RGATCY 3 cut(s) 626, 1099, 1825
MhlI GDGCHC 5 cut(s) 108, 568, 716, 898, 1639
MlyI GAGTC 7 cut(s) 317, 472, 779, 1160, 1591, 1769, 2000
MmeI TCCRAC 1 cut(s) 2175
Mph1103I ATGCAT 1 cut(s) 784
MroXI GAANNNNTTC 1 cut(s) 1624
MslI CAYNNNNRTG 6 cut(s) 443, 663, 1692, 1883, 2073, 2233
MspA1I CMGCKG 2 cut(s) 796, 1238
MspI CCGG 2 cut(s) 306, 1754
MspR9I CCNGG 5 cut(s) 307, 336, 417, 903, 2409
MvaI CCWGG 4 cut(s) 336, 417, 903, 2409
MwoI GCNNNNNNNGC 4 cut(s) 869, 878, 893, 1629
NciI CCSGG 1 cut(s) 307
NdeI CATATG 1 cut(s) 889
NlaIII CATG 6 cut(s) 662, 835, 1913, 1932, 2139, 2332
NlaIV GGNNCC 5 cut(s) 126, 333, 801, 895, 896
NmeAIII GCCGAG 1 cut(s) 1195
NmuCI GTSAC 3 cut(s) 265, 382, 1471
NsiI ATGCAT 1 cut(s) 784
NspI RCATGY 3 cut(s) 662, 835, 2332
NspV TTCGAA 1 cut(s) 721
OliI CACNNNNGTG 2 cut(s) 443, 2233
PaeI GCATGC 1 cut(s) 662
PagI TCATGA 1 cut(s) 1909
PaqCI CACCTGC 1 cut(s) 1049
PceI AGGCCT 1 cut(s) 881
PciI ACATGT 1 cut(s) 831
PciSI GCTCTTC 1 cut(s) 2648
PcsI WCGNNNNNNNCGW 1 cut(s) 1615
PdmI GAANNNNTTC 1 cut(s) 1624
PfeI GAWTC 7 cut(s) 35, 344, 593, 746, 1196, 1802, 2515
PflMI CCANNNNNTGG 3 cut(s) 160, 2071, 2620
PfoI TCCNGGA 1 cut(s) 415
PinAI ACCGGT 1 cut(s) 1753
PkrI GCNGC 9 cut(s) 304, 865, 908, 1114, 1237, 1712, 2094, 2482, 2572
PleI GAGTC 7 cut(s) 317, 472, 778, 1159, 1590, 1769, 1999
PpsI GAGTC 7 cut(s) 317, 472, 778, 1159, 1590, 1769, 1999
Ppu21I YACGTR 1 cut(s) 2180
PscI ACATGT 1 cut(s) 831
PshBI ATTAAT 1 cut(s) 140
Psp124BI GAGCTC 1 cut(s) 1639
Psp6I CCWGG 4 cut(s) 334, 415, 901, 2407
PspGI CCWGG 4 cut(s) 334, 415, 901, 2407
PspN4I GGNNCC 5 cut(s) 126, 333, 801, 895, 896
PspOMI GGGCCC 1 cut(s) 894
PspPI GGNCC 4 cut(s) 894, 895, 1311, 2119
PstI CTGCAG 2 cut(s) 919, 1634
PstNI CAGNNNCTG 3 cut(s) 422, 749, 2620
PsuI RGATCY 3 cut(s) 626, 1099, 1825
PvuII CAGCTG 2 cut(s) 796, 1238
RsaI GTAC 4 cut(s) 1047, 1843, 1852, 2182
RsaNI GTAC 4 cut(s) 1046, 1842, 1851, 2181
RseI CAYNNNNRTG 6 cut(s) 443, 663, 1692, 1883, 2073, 2233
SacI GAGCTC 1 cut(s) 1639
SapI GCTCTTC 1 cut(s) 2648
SatI GCNGC 9 cut(s) 303, 864, 907, 1113, 1236, 1711, 2093, 2481, 2571
Sau96I GGNCC 4 cut(s) 894, 895, 1311, 2119
SchI GAGTC 7 cut(s) 317, 472, 779, 1160, 1591, 1769, 2000
ScrFI CCNGG 5 cut(s) 307, 336, 417, 903, 2409
SduI GDGCHC 5 cut(s) 108, 568, 716, 898, 1639
SfaNI GCATC 5 cut(s) 791, 1489, 1986, 2137, 2287
SfcI CTRYAG 4 cut(s) 915, 1226, 1558, 1630
SfuI TTCGAA 1 cut(s) 721
SgrAI CRCCGGYG 1 cut(s) 1753
SinI GGWCC 1 cut(s) 1311
SmiMI CAYNNNNRTG 6 cut(s) 443, 663, 1692, 1883, 2073, 2233
SmlI CTYRAG 2 cut(s) 2240, 2558
SmoI CTYRAG 2 cut(s) 2240, 2558
SphI GCATGC 1 cut(s) 662
SseBI AGGCCT 1 cut(s) 881
SsiI CCGC 4 cut(s) 1033, 1724, 2363, 2481
SspMI CTAG 5 cut(s) 804, 1041, 1571, 1814, 1979
SstI GAGCTC 1 cut(s) 1639
StuI AGGCCT 1 cut(s) 881
StyD4I CCNGG 5 cut(s) 305, 334, 415, 901, 2407
StyI CCWWGG 2 cut(s) 1049, 1248
TaaI ACNGT 7 cut(s) 233, 271, 1682, 2264, 2348, 2358, 2582
TaiI ACGT 4 cut(s) 321, 389, 1292, 2182
TaqI TCGA 5 cut(s) 292, 721, 1618, 1994, 2377
TaqII GACCGA 1 cut(s) 1328
TatI WGTACW 1 cut(s) 1850
TauI GCSGC 1 cut(s) 2483
TfiI GAWTC 7 cut(s) 35, 344, 593, 746, 1196, 1802, 2515
TscAI CASTG 5 cut(s) 238, 1879, 2226, 2346, 2463
TseFI GTSAC 3 cut(s) 265, 382, 1471
TseI GCWGC 8 cut(s) 302, 863, 906, 1112, 1235, 1710, 2092, 2570
Tsp45I GTSAC 3 cut(s) 265, 382, 1471
TspGWI ACGGA 1 cut(s) 2116
TspRI CASTG 5 cut(s) 238, 1879, 2226, 2346, 2463
Van91I CCANNNNNTGG 3 cut(s) 160, 2071, 2620
VpaK11BI GGWCC 1 cut(s) 1311
VspI ATTAAT 1 cut(s) 140
XagI CCTNNNNNAGG 1 cut(s) 731
XapI RAATTY 4 cut(s) 89, 277, 1015, 2198
XceI RCATGY 3 cut(s) 662, 835, 2332
XcmI CCANNNNNNNNNTGG 2 cut(s) 161, 2007
XmiI GTMKAC 1 cut(s) 2548
XmnI GAANNNNTTC 1 cut(s) 1624
XspI CTAG 5 cut(s) 804, 1041, 1571, 1814, 1979
Zsp2I ATGCAT 1 cut(s) 784
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.