Rh6AG340400

breast cancer carboxy-terminal domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
OG0011125
Physical Location & Seq
Reverse (-)
53989647 .. 53993344
3698 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG340400.1

Sequence Viewer

Length: 2703 bp
ATGGCTGTTTCTCACGCCCAGACCCACACCTCTGATTCTCACTCTCACCCATCTGGGTTTAATAATGAAGATGATCAGAACCGCCCCAAATTCCAAGACACCGAGCCCTTTGATGAGACTATGGTGCCCGATAGCCCATTAATGGAGGAAACCCAGTTGGTGGATGGTTCGGATTGCGATGACAAGATGAGGACTGGTATGAGTGGGTTTGAGGATGAAGTGGTGCTTGACAGTGAGGATGAGGAAGTTAATGGAAGCCGAATAGTGACTGTTAGAAATTTGTCTTCGGATCGAATATGCGCTGCAGGGTTAAGCTACGTTGACTCTCAGGAACCAGGGGAGGAATCCCAAGCCAATGCACTTGATTTTGTGGATCATTTTGTGACGTTGAACGACGATCTTAGTTTTTATTCTCCAGGAACTGCCAACAGGAAAACCACTAAGGTGCAATCCCCTCCTGTTACAAACACAAAGGGGACTCATAGTTTGGCGAGGTTGGTTGAACTCAGGTCTCAAAATGAAAAAGCCAAAGCCTTTGAATGGGTTGATCCTGAGGAGAATGGAGCACTTCGTTTTTTAGACAAGAAGATGGAATCATCTTTGGTTAATCCTGAGGGCAAGGAGAGATCTGGTGTTTCAAGGAAAGAGAAAGTCAGGCATGCTAATCATACAAAATGTATTAGCTCAGGTGATGGGGGCAAAAAAGAGAGGAGCACAATTCGAAACCTCCATAAGGAAATCACAGAATCTGAAGGCAAGATTGAAAACGAGTCTGTCAATGCATCAGAAGATTATTTATATGCAAAACCAACAGAACTCCAGCTGGAACCTAGTGAAGAAGGAGCAAATATAGTTGACATGTTTGATATTGGTTTTAACACTCAAATTGCTGCCGAAGCTATGGAGGCCTTAGCATATGGGGGCCATCCTGGCTGCAATACTGCAGATGTTGGTTCAGGAGGTGCTAAAGAGAATACAGCTTCTTTGGAACATTGCTCTCCTCAAAAGAGTGATTTTTCTAATGTAGCAGGTATTAGCAAAAATGTAAACCGAAGAAACCGCTCCACTAGAGTACCAAGGAGAGCAGGTGCTTCATCTCAAAAACAATCTAAGAAGCAAGAGTTAGATCCTGATTTGGCGGCAGTAACAAATGTGAAGAGAAGCAGATTTTTTGGCGAGTCTTGTAGTAATTTTGCCGAGGCCAACGATAGTTTATGTATAGAATCTCCCAAGTCTGTCAAGAAAAGGAAGCTACAGAGTGCAGCTGATTATTCCAAGGTTTCTTCTTCTGGAAAACACCAGACTACCCAGTCAACGTCAGGGGGTAGGTCAAGAAGGACCGAGGATGGATCAAACAATGGTGTGGGGGATGGTATTGTTACATACAGAAGAAAGAAGAGATGTTTAAAACCTCAATCACCTGAAATCATCAGTAGTTCTGAGGCTGGATCAGACGAGCCAGTAGAAAAGAAGAACAATGTTAAGAAGGACAACATTGTCACATACAGGAGAAAGAAGAGAATAGATGCAAAAGAAAGTAGTTCAGTTTATGTTTCATCGGAGGGAAATAGTAGCAGAGAAGCCTGTAGCTTAAAACTAGGTCTATGGAGTCATCCCAAAGGGAAAAGAACAGGTTGCAATGCTCGAAGCAATTCCTGCAGAGCTCCTGTTCCTTCTACTCCATTTCCACTACTTGACAAAAAGGACAGTTCCCATTCTGATGAAAGGCCAGAGAGCAGCAACAATATGGCGGGGAAAGAACAATCATCGTATTGCCCACCGGTGCTTTCCTTAGATAATGACTCTGACAGAACCTTGTTTGAATTGCAATCTGGCGAGCTAGTTGGGACAGATCCTACATCTTCTGGTAGGGAATGTACTGCGCCATCTAACTCTACCACTGGCATAAATGTGGGATCATCCAAATATGTATCTCATGACTATCACAAAAAGCCATGCAACAAAAACTTTCCCAAATCACCTCTTATGAAAGAGCTTATTGGACTAGGTGTCCCTGAGTCGATGCCAGATTTTGCTTGGAAAGATTTGAGAAGGCGAAGAAGTATGGCCTATGTTCAAGTTCTGTTTAGCCAGCATTTGGATGATGATATCATTAAGCAGCAGAAAAAGATCATTGCACGACTGGGCCTATCCGTTGCTTCATGTTCTATGGATGCAACACACTTTATAGCAGATCAATTTGCACGTACAAGGAATATGTTGGAATTCATTGCTCTTGGTAAACCAGTGGTAACACATTTGTGGCTTGAGAGTTGTGGGGAAGCAAACTGTTTGATTAGTGAGAAAAGCTATATTCTGAGGGATGCCAAAAAGGAAAAGGAAATTGGTTTTAGCATGCTTGTTTCACTGGACTGTGCAAAACGGTGTCCACTTCTAAAGGGTCGAAAAGTCTTCATTACTCCGAACATAAAACCTGGAAAAGAAATGATGACCAGCTTGGTGAAGACAGCTCAGGGCGAGCCAGTGGAGAAAGCTCAGATATCTGCCGCAAAGGGTAAAAAGATTTTCAATGAATTATTGATTCTTTCTTGTGAAGAAGATGAAGCAATCTGTCTACCTTTCCTTGAGAAAGGTGCAGCAGTTTACAGTTCAGAACTTTTACTAAATGGTATAGTTATCCAGAGACTGGAATACAAGAGACATCAGCTCTTCACCAATGTCGTCAAGAAAGATCGGCCTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RTT107_BRCT_5

Protein Analysis

900

Amino Acids

99.25

Weight (kDa)

7.25

Isoelectric Point (pI)

56.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BRCT_2 PF16589 797 - 885 1.8e-16 BRCT domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011125)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G03130 AT4G03130 AT4G03130 AT4G03130
fragaria_vesca FvH4_2g24660
malus_domestica MD11G1297400.v1.1 MD11G1297500.v1.1
prunus_persica Prupe.8G251900_v2.0.a1 Prupe.8G251900_v2.0.a1
pyrus_communis pycom11g26140
rosa_chinensis RchiOBHm_Chr6g0292491
rosa_laevigata RLG00000012019
rosa_multiflora Rmu_sc0001354.1_g000027
rosa_roxburghii Rroxscaffold_7G00175010
rosa_rugosa Rorug06G0227200
rosa_samantha Rh6AG340400 Rh6BG347700 Rh6CG354700 Rh6DG340500
rosa_wichuraiana Rw6G029640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1076
AasI GACNNNNNNGTC 2 cut(s) 1309, 1496
Acc36I ACCTGC 2 cut(s) 1019, 1076
AccB1I GGYRCC 1 cut(s) 124
AccB7I CCANNNNNTGG 3 cut(s) 160, 2098, 2647
AccBSI CCGCTC 1 cut(s) 1062
AccI GTMKAC 1 cut(s) 2575
AciI CCGC 5 cut(s) 82, 1060, 1139, 1751, 2508
AclWI GGATC 8 cut(s) 297, 381, 542, 1121, 1357, 1456, 1847, 1924
AcsI RAATTY 3 cut(s) 89, 277, 2225
AcuI CTGAAG 1 cut(s) 771
AfaI GTAC 3 cut(s) 1074, 1879, 2209
AfiI CCNNNNNNNGG 6 cut(s) 142, 160, 540, 733, 2098, 2647
AflIII ACRYGT 1 cut(s) 858
AgeI ACCGGT 1 cut(s) 1780
AgsI TTSAA 8 cut(s) 391, 503, 539, 639, 764, 1823, 2078, 2530
AhdI GACNNNNNGTC 1 cut(s) 2009
AjnI CCWGG 4 cut(s) 334, 415, 928, 2434
AjuI GAANNNNNNNTTGG 2 cut(s) 2328, 2360
AleI CACNNNNGTG 2 cut(s) 443, 2260
Alw21I GWGCWC 3 cut(s) 568, 716, 1666
Alw26I GTCTC 4 cut(s) 110, 516, 2638, 2653
AlwI GGATC 8 cut(s) 297, 381, 542, 1121, 1357, 1456, 1847, 1924
AlwNI CAGNNNCTG 3 cut(s) 422, 749, 2647
AoxI GGCC 7 cut(s) 906, 922, 1200, 1727, 2067, 2146, 2696
ApeKI GCWGC 7 cut(s) 302, 890, 933, 1262, 1737, 2119, 2597
ApoI RAATTY 3 cut(s) 89, 277, 2225
ArsI GACNNNNNNTTYG 2 cut(s) 469, 501
AseI ATTAAT 1 cut(s) 140
AsiGI ACCGGT 1 cut(s) 1780
Asp700I GAANNNNTTC 1 cut(s) 1651
AspLEI GCGC 2 cut(s) 302, 1885
AspS9I GGNCC 3 cut(s) 922, 1338, 2146
AsuHPI GGTGA 6 cut(s) 38, 701, 1410, 1971, 2473, 2665
AsuII TTCGAA 1 cut(s) 721
AvaII GGWCC 1 cut(s) 1338
AxyI CCTNAGG 2 cut(s) 552, 612
BaeGI GKGCMC 1 cut(s) 129
BaeI ACNNNNGTAYC 2 cut(s) 1056, 1089
BanI GGYRCC 1 cut(s) 124
BanII GRGCYC 2 cut(s) 108, 1666
BbsI GAAGAC 3 cut(s) 276, 2404, 2471
Bbv12I GWGCWC 3 cut(s) 568, 716, 1666
BbvI GCAGC 7 cut(s) 289, 877, 920, 1274, 1749, 2131, 2609
BccI CCATC 8 cut(s) 58, 158, 583, 686, 933, 1340, 1364, 1894
BciT130I CCWGG 4 cut(s) 336, 417, 930, 2436
BclI TGATCA 1 cut(s) 73
BcoDI GTCTC 4 cut(s) 110, 516, 2638, 2653
BfaI CTAG 5 cut(s) 831, 1068, 1598, 1841, 2006
BfmI CTRYAG 5 cut(s) 303, 942, 1253, 1585, 1657
BfuAI ACCTGC 2 cut(s) 1019, 1076
BglI GCCNNNNNGGC 1 cut(s) 930
BglII AGATCT 1 cut(s) 626
BisI GCNGC 9 cut(s) 303, 891, 934, 1140, 1263, 1738, 2120, 2508, 2598
BlsI GCNGC 9 cut(s) 304, 892, 935, 1141, 1264, 1739, 2121, 2509, 2599
Bme1390I CCNGG 4 cut(s) 336, 417, 930, 2436
Bme18I GGWCC 1 cut(s) 1338
BmeRI GACNNNNNGTC 1 cut(s) 2009
BmgT120I GGNCC 3 cut(s) 922, 1338, 2146
BmiI GGNNCC 4 cut(s) 126, 333, 828, 923
BmrFI CCNGG 4 cut(s) 336, 417, 930, 2436
BmrI ACTGGG 3 cut(s) 148, 1303, 2153
BmsI GCATC 5 cut(s) 791, 1516, 2013, 2164, 2314
BmuI ACTGGG 3 cut(s) 148, 1303, 2153
BpiI GAAGAC 3 cut(s) 276, 2404, 2471
BpmI CTGGAG 2 cut(s) 399, 803
Bpu10I CCTNAGC 3 cut(s) 685, 910, 2472
Bpu14I TTCGAA 1 cut(s) 721
BpuEI CTTGAG 2 cut(s) 2288, 2606
BsaAI YACGTR 1 cut(s) 2207
BsaI GGTCTC 1 cut(s) 516
BsaJI CCNNGG 5 cut(s) 335, 1076, 1197, 1275, 1341
BsaWI WCCGGW 1 cut(s) 1780
BsaXI ACNNNNNCTCC 2 cut(s) 1072, 1102
Bsc4I CCNNNNNNNGG 6 cut(s) 142, 160, 540, 733, 2098, 2647
Bse118I RCCGGY 1 cut(s) 1780
Bse21I CCTNAGG 2 cut(s) 552, 612
Bse3DI GCAATG 4 cut(s) 991, 1645, 2133, 2229
BseBI CCWGG 4 cut(s) 336, 417, 930, 2436
BseDI CCNNGG 5 cut(s) 335, 1076, 1197, 1275, 1341
BseLI CCNNNNNNNGG 6 cut(s) 142, 160, 540, 733, 2098, 2647
BseMI GCAATG 4 cut(s) 991, 1645, 2133, 2229
BseRI GAGGAG 3 cut(s) 569, 724, 990
BseSI GKGCMC 1 cut(s) 129
BseXI GCAGC 7 cut(s) 289, 877, 920, 1274, 1749, 2131, 2609
BsgI GTGCAG 2 cut(s) 1281, 2616
BshFI GGCC 7 cut(s) 908, 924, 1202, 1729, 2069, 2148, 2698
BshNI GGYRCC 1 cut(s) 124
BshTI ACCGGT 1 cut(s) 1780
BsiHKAI GWGCWC 3 cut(s) 568, 716, 1666
BsiSI CCGG 1 cut(s) 1781
BslFI GGGAC 3 cut(s) 490, 1861, 1997
BslI CCNNNNNNNGG 6 cut(s) 142, 160, 540, 733, 2098, 2647
BsmAI GTCTC 4 cut(s) 110, 516, 2638, 2653
BsmFI GGGAC 3 cut(s) 490, 1861, 1997
BsnI GGCC 7 cut(s) 908, 924, 1202, 1729, 2069, 2148, 2698
Bso31I GGTCTC 1 cut(s) 516
Bsp119I TTCGAA 1 cut(s) 721
Bsp1286I GDGCHC 5 cut(s) 108, 129, 568, 716, 1666
BspACI CCGC 5 cut(s) 82, 1060, 1139, 1751, 2508
BspANI GGCC 7 cut(s) 908, 924, 1202, 1729, 2069, 2148, 2698
BspHI TCATGA 1 cut(s) 1936
BspLI GGNNCC 4 cut(s) 126, 333, 828, 923
BspMAI CTGCAG 3 cut(s) 307, 946, 1661
BspMI ACCTGC 2 cut(s) 1019, 1076
BspPI GGATC 8 cut(s) 297, 381, 542, 1121, 1357, 1456, 1847, 1924
BspQI GCTCTTC 1 cut(s) 2675
BspT104I TTCGAA 1 cut(s) 721
BspT107I GGYRCC 1 cut(s) 124
BspTNI GGTCTC 1 cut(s) 516
BsrBI CCGCTC 1 cut(s) 1062
BsrDI GCAATG 4 cut(s) 991, 1645, 2133, 2229
BsrFI RCCGGY 1 cut(s) 1780
BssAI RCCGGY 1 cut(s) 1780
BssECI CCNNGG 5 cut(s) 335, 1076, 1197, 1275, 1341
BssT1I CCWWGG 2 cut(s) 1076, 1275
Bst2UI CCWGG 4 cut(s) 336, 417, 930, 2436
Bst4CI ACNGT 7 cut(s) 233, 271, 1709, 2291, 2375, 2385, 2609
Bst6I CTCTTC 4 cut(s) 1151, 1391, 1511, 2675
BstAPI GCANNNNNTGC 1 cut(s) 1656
BstBAI YACGTR 1 cut(s) 2207
BstBI TTCGAA 1 cut(s) 721
BstC8I GCNNGC 5 cut(s) 660, 1838, 2093, 2357, 2480
BstENI CCTNNNNNAGG 1 cut(s) 731
BstHHI GCGC 2 cut(s) 302, 1885
BstMAI GTCTC 4 cut(s) 110, 516, 2638, 2653
BstMWI GCNNNNNNNGC 4 cut(s) 896, 905, 930, 1656
BstNI CCWGG 4 cut(s) 336, 417, 930, 2436
BstNSI RCATGY 3 cut(s) 662, 862, 2359
BstSCI CCNGG 4 cut(s) 334, 415, 928, 2434
BstSFI CTRYAG 5 cut(s) 303, 942, 1253, 1585, 1657
BstSLI GKGCMC 1 cut(s) 129
BstV1I GCAGC 7 cut(s) 289, 877, 920, 1274, 1749, 2131, 2609
BstV2I GAAGAC 3 cut(s) 276, 2404, 2471
BstX2I RGATCY 3 cut(s) 626, 1126, 1852
BstYI RGATCY 3 cut(s) 626, 1126, 1852
Bsu36I CCTNAGG 2 cut(s) 552, 612
BsuRI GGCC 7 cut(s) 908, 924, 1202, 1729, 2069, 2148, 2698
BtgZI GCGATG 1 cut(s) 192
BtsIMutI CAGTG 5 cut(s) 238, 1899, 2253, 2366, 2490
BveI ACCTGC 2 cut(s) 1019, 1076
Cac8I GCNNGC 5 cut(s) 660, 1838, 2093, 2357, 2480
CaiI CAGNNNCTG 3 cut(s) 422, 749, 2647
CciI TCATGA 1 cut(s) 1936
CfoI GCGC 2 cut(s) 302, 1885
Cfr10I RCCGGY 1 cut(s) 1780
Cfr13I GGNCC 3 cut(s) 922, 1338, 2146
Csp6I GTAC 3 cut(s) 1073, 1878, 2208
CspAI ACCGGT 1 cut(s) 1780
CviAII CATG 6 cut(s) 659, 859, 1937, 1956, 2163, 2356
CviQI GTAC 3 cut(s) 1073, 1878, 2208
DraI TTTAAA 1 cut(s) 1407
DrdI GACNNNNNNGTC 2 cut(s) 1309, 1496
DriI GACNNNNNGTC 1 cut(s) 2009
DseDI GACNNNNNNGTC 2 cut(s) 1309, 1496
Eam1104I CTCTTC 4 cut(s) 1151, 1391, 1511, 2675
Eam1105I GACNNNNNGTC 1 cut(s) 2009
EarI CTCTTC 4 cut(s) 1151, 1391, 1511, 2675
Ecl136II GAGCTC 1 cut(s) 1664
Eco130I CCWWGG 2 cut(s) 1076, 1275
Eco147I AGGCCT 1 cut(s) 908
Eco24I GRGCYC 2 cut(s) 108, 1666
Eco31I GGTCTC 1 cut(s) 516
Eco32I GATATC 2 cut(s) 2110, 2502
Eco47I GGWCC 1 cut(s) 1338
Eco53kI GAGCTC 1 cut(s) 1664
Eco57I CTGAAG 1 cut(s) 771
Eco81I CCTNAGG 2 cut(s) 552, 612
EcoICRI GAGCTC 1 cut(s) 1664
EcoNI CCTNNNNNAGG 1 cut(s) 731
EcoRI GAATTC 1 cut(s) 2225
EcoRII CCWGG 4 cut(s) 334, 415, 928, 2434
EcoRV GATATC 2 cut(s) 2110, 2502
EcoT14I CCWWGG 2 cut(s) 1076, 1275
EcoT22I ATGCAT 1 cut(s) 784
EcoT38I GRGCYC 2 cut(s) 108, 1666
ErhI CCWWGG 2 cut(s) 1076, 1275
FaeI CATG 6 cut(s) 662, 862, 1940, 1959, 2166, 2359
FalI AAGNNNNNCTT 2 cut(s) 210, 242
FaqI GGGAC 3 cut(s) 490, 1861, 1997
FatI CATG 6 cut(s) 658, 858, 1936, 1955, 2162, 2355
FauI CCCGC 1 cut(s) 1744
FauNDI CATATG 1 cut(s) 916
FbaI TGATCA 1 cut(s) 73
FblI GTMKAC 1 cut(s) 2575
Fnu4HI GCNGC 9 cut(s) 303, 891, 934, 1140, 1263, 1738, 2120, 2508, 2598
FriOI GRGCYC 2 cut(s) 108, 1666
Fsp4HI GCNGC 9 cut(s) 303, 891, 934, 1140, 1263, 1738, 2120, 2508, 2598
FspBI CTAG 5 cut(s) 831, 1068, 1598, 1841, 2006
GlaI GCGC 2 cut(s) 301, 1884
GluI GCNGC 9 cut(s) 303, 891, 934, 1140, 1263, 1738, 2120, 2508, 2598
GsuI CTGGAG 2 cut(s) 399, 803
HaeIII GGCC 7 cut(s) 908, 924, 1202, 1729, 2069, 2148, 2698
HapII CCGG 1 cut(s) 1781
HhaI GCGC 2 cut(s) 302, 1885
Hin1II CATG 6 cut(s) 662, 862, 1940, 1959, 2166, 2359
Hin6I GCGC 2 cut(s) 300, 1883
HinP1I GCGC 2 cut(s) 300, 1883
HincII GTYRAC 3 cut(s) 322, 856, 1314
HindII GTYRAC 3 cut(s) 322, 856, 1314
HpaII CCGG 1 cut(s) 1781
HphI GGTGA 6 cut(s) 38, 701, 1410, 1971, 2473, 2665
Hpy166II GTNNAC 8 cut(s) 322, 856, 1048, 1314, 2243, 2390, 2576, 2605
Hpy8I GTNNAC 8 cut(s) 322, 856, 1048, 1314, 2243, 2390, 2576, 2605
Hpy99I CGWCG 1 cut(s) 398
HpyAV CCTTC 6 cut(s) 746, 833, 1329, 1480, 1683, 2046
HpyCH4III ACNGT 7 cut(s) 233, 271, 1709, 2291, 2375, 2385, 2609
HpyCH4IV ACGT 4 cut(s) 318, 386, 1316, 2206
HpyF10VI GCNNNNNNNGC 4 cut(s) 896, 905, 930, 1656
HpySE526I ACGT 4 cut(s) 318, 386, 1316, 2206
Hsp92II CATG 6 cut(s) 662, 862, 1940, 1959, 2166, 2359
HspAI GCGC 2 cut(s) 300, 1883
Ksp22I TGATCA 1 cut(s) 73
LguI GCTCTTC 1 cut(s) 2675
LmnI GCTCC 5 cut(s) 563, 711, 842, 1067, 1669
Lsp1109I GCAGC 7 cut(s) 289, 877, 920, 1274, 1749, 2131, 2609
LweI GCATC 5 cut(s) 791, 1516, 2013, 2164, 2314
MaeI CTAG 5 cut(s) 831, 1068, 1598, 1841, 2006
MaeII ACGT 4 cut(s) 318, 386, 1316, 2206
MaeIII GTNAC 7 cut(s) 265, 382, 460, 1144, 1378, 1498, 2251
MbiI CCGCTC 1 cut(s) 1062
MflI RGATCY 3 cut(s) 626, 1126, 1852
MhlI GDGCHC 5 cut(s) 108, 129, 568, 716, 1666
MlyI GAGTC 7 cut(s) 317, 472, 779, 1187, 1618, 1796, 2027
MmeI TCCRAC 1 cut(s) 2202
Mph1103I ATGCAT 1 cut(s) 784
MroXI GAANNNNTTC 1 cut(s) 1651
MslI CAYNNNNRTG 5 cut(s) 443, 1719, 1910, 2100, 2260
MspA1I CMGCKG 2 cut(s) 823, 1265
MspI CCGG 1 cut(s) 1781
MspR9I CCNGG 4 cut(s) 336, 417, 930, 2436
MvaI CCWGG 4 cut(s) 336, 417, 930, 2436
MwoI GCNNNNNNNGC 4 cut(s) 896, 905, 930, 1656
NdeI CATATG 1 cut(s) 916
NlaIII CATG 6 cut(s) 662, 862, 1940, 1959, 2166, 2359
NlaIV GGNNCC 4 cut(s) 126, 333, 828, 923
NmeAIII GCCGAG 1 cut(s) 1222
NmuCI GTSAC 3 cut(s) 265, 382, 1498
NsiI ATGCAT 1 cut(s) 784
NspI RCATGY 3 cut(s) 662, 862, 2359
NspV TTCGAA 1 cut(s) 721
OliI CACNNNNGTG 2 cut(s) 443, 2260
PaeI GCATGC 2 cut(s) 662, 2359
PagI TCATGA 1 cut(s) 1936
PaqCI CACCTGC 1 cut(s) 1076
PceI AGGCCT 1 cut(s) 908
PciI ACATGT 1 cut(s) 858
PciSI GCTCTTC 1 cut(s) 2675
PdmI GAANNNNTTC 1 cut(s) 1651
PfeI GAWTC 6 cut(s) 35, 344, 593, 746, 1223, 2542
PflMI CCANNNNNTGG 3 cut(s) 160, 2098, 2647
PfoI TCCNGGA 1 cut(s) 415
PinAI ACCGGT 1 cut(s) 1780
PkrI GCNGC 9 cut(s) 304, 892, 935, 1141, 1264, 1739, 2121, 2509, 2599
PleI GAGTC 7 cut(s) 317, 472, 778, 1186, 1617, 1796, 2026
PpsI GAGTC 7 cut(s) 317, 472, 778, 1186, 1617, 1796, 2026
Ppu21I YACGTR 1 cut(s) 2207
PscI ACATGT 1 cut(s) 858
PshBI ATTAAT 1 cut(s) 140
Psp124BI GAGCTC 1 cut(s) 1666
Psp6I CCWGG 4 cut(s) 334, 415, 928, 2434
PspGI CCWGG 4 cut(s) 334, 415, 928, 2434
PspN4I GGNNCC 4 cut(s) 126, 333, 828, 923
PspPI GGNCC 3 cut(s) 922, 1338, 2146
PstI CTGCAG 3 cut(s) 307, 946, 1661
PstNI CAGNNNCTG 3 cut(s) 422, 749, 2647
PsuI RGATCY 3 cut(s) 626, 1126, 1852
PvuII CAGCTG 2 cut(s) 823, 1265
RsaI GTAC 3 cut(s) 1074, 1879, 2209
RsaNI GTAC 3 cut(s) 1073, 1878, 2208
RseI CAYNNNNRTG 5 cut(s) 443, 1719, 1910, 2100, 2260
SacI GAGCTC 1 cut(s) 1666
SapI GCTCTTC 1 cut(s) 2675
SatI GCNGC 9 cut(s) 303, 891, 934, 1140, 1263, 1738, 2120, 2508, 2598
Sau96I GGNCC 3 cut(s) 922, 1338, 2146
SchI GAGTC 7 cut(s) 317, 472, 779, 1187, 1618, 1796, 2027
ScrFI CCNGG 4 cut(s) 336, 417, 930, 2436
SduI GDGCHC 5 cut(s) 108, 129, 568, 716, 1666
SfaNI GCATC 5 cut(s) 791, 1516, 2013, 2164, 2314
SfcI CTRYAG 5 cut(s) 303, 942, 1253, 1585, 1657
SfuI TTCGAA 1 cut(s) 721
SgrAI CRCCGGYG 1 cut(s) 1780
SinI GGWCC 1 cut(s) 1338
SmiMI CAYNNNNRTG 5 cut(s) 443, 1719, 1910, 2100, 2260
SmlI CTYRAG 2 cut(s) 2267, 2585
SmoI CTYRAG 2 cut(s) 2267, 2585
SphI GCATGC 2 cut(s) 662, 2359
SseBI AGGCCT 1 cut(s) 908
SsiI CCGC 5 cut(s) 82, 1060, 1139, 1751, 2508
SspMI CTAG 5 cut(s) 831, 1068, 1598, 1841, 2006
SstI GAGCTC 1 cut(s) 1666
StuI AGGCCT 1 cut(s) 908
StyD4I CCNGG 4 cut(s) 334, 415, 928, 2434
StyI CCWWGG 2 cut(s) 1076, 1275
TaaI ACNGT 7 cut(s) 233, 271, 1709, 2291, 2375, 2385, 2609
TaiI ACGT 4 cut(s) 321, 389, 1319, 2209
TaqI TCGA 5 cut(s) 292, 721, 1645, 2021, 2404
TaqII GACCGA 1 cut(s) 1355
TatI WGTACW 1 cut(s) 1877
TauI GCSGC 2 cut(s) 1142, 2510
TfiI GAWTC 6 cut(s) 35, 344, 593, 746, 1223, 2542
TscAI CASTG 5 cut(s) 238, 1906, 2253, 2373, 2490
TseFI GTSAC 3 cut(s) 265, 382, 1498
TseI GCWGC 7 cut(s) 302, 890, 933, 1262, 1737, 2119, 2597
Tsp45I GTSAC 3 cut(s) 265, 382, 1498
TspGWI ACGGA 1 cut(s) 2143
TspRI CASTG 5 cut(s) 238, 1906, 2253, 2373, 2490
Van91I CCANNNNNTGG 3 cut(s) 160, 2098, 2647
VpaK11BI GGWCC 1 cut(s) 1338
VspI ATTAAT 1 cut(s) 140
XagI CCTNNNNNAGG 1 cut(s) 731
XapI RAATTY 3 cut(s) 89, 277, 2225
XceI RCATGY 3 cut(s) 662, 862, 2359
XcmI CCANNNNNNNNNTGG 2 cut(s) 161, 2034
XmiI GTMKAC 1 cut(s) 2575
XmnI GAANNNNTTC 1 cut(s) 1651
XspI CTAG 5 cut(s) 831, 1068, 1598, 1841, 2006
Zsp2I ATGCAT 1 cut(s) 784
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.