Rh6BG347700

breast cancer carboxy-terminal domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6B
OG0011125
Physical Location & Seq
Reverse (-)
57838417 .. 57842463
4047 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6BG347700.1

Sequence Viewer

Length: 2652 bp
ATGGCTGTTTCTCACGCCCAGACCCACACCTCTGATTCTCACTCTCACCCATCTGGGTTTAATAAGCTCAAAGATGAAGATGATCAGAACCACCCCCACTTCCAAGACACCGAGCCCTTTGATGAGACTATGGTGCCTGATAGCCCATTAATGGAGGAAACCCAGTTGGTGGATGGTTCGGATTGCGATGACAAGACGAGGACTGGTATGAGTGGGTTTGAGGATGAAGTGGTGCTTGACAGTGAGGATGAGGAAGTTAATGGAAGCCGAATAGTGACTGTTAGAAATTTGTCTTCGGATCGACTATGCGCTGCAGGGTTAAGCTACGTTGACTCTCAGGAACCAGGGGAGGAATCCCAAGCCAATGCACTTGATTTTGTGGATCATTTTGTGACGTTGAACGACGATCTTAGTTTTTATTCTCCAGGAACTGCCAACAGGAAAACCACTAAGGTGAAATCCCCTCCTGTTACAAACACAAAGGGGACTCATAGTTTGGCGAGGTTGGTTGAACTCAGGTCTCAAAATGAAAAAGCCAAAGCCTTTGAATGGGTTGATCCTGAGGAGAATGGAGCACTTCGATTTTTAGACAAGAAGATGGAATCGTCTTTGGTTAATCCTGAGGGCAAGGAGAGATCTGGTGTTGCAAGGAAAGAGAAAGTCAGGCATGCTAATGATACAAAATGTATTAGCTCAGGTGATGGGGGCAAAAAAGAGAGGAGCATAATTCGAAACCTCCATAAGGAAATCACAGAATCTGAAGGCAAGATTGAAAACGAGTCTGTCAATGCATCAGAAGATTATTTATATGCAAAACCAACAGAACTCCAGCTGGAACCTAGTGAGGAAGGAGGAAATATAGTTGACATGTTTGATATTGGTTTTAACACTCAAATTGCTGCCGAAGCTATGGAGGCCTTAGCATATGGGGGCCATCCTGGCTGCAATACTGCGGATGTTGGTTCAGGAGGTGCTAAAGAGAATACAGCTTCTTTGGAACATCGCTCTCCTCAAAAGAGTGATTTTTCTAATGTAGCAGGTATTAGCACAAATGTAAACCGAAGAAACCGCTCCACTAGAGTACCAAGGAGAGCAGGTGCTTCATCTCAAAAACAATCTAAGAAGCAAGAGTTAGATCCTGATTTGGCGGCAGTAACAAATGTGAAGAGAAGCAGATTTTTTGGTGAGTCTTGTAGTAATTTTGCCGAGGCCAACGATAGTTTATGTATAGAATCTCCCAAGTCTGTCAAGAAAAGGAAGCTACAGAGTGCAGCTGATTATTCCAAGGTTTCTTCTTCTGGAAAACACCAGACTACCCAGTCAACGTCAGGGGGTAGGTCAAGAAGGACCGAGGATGGATCAAACAATGGTGTGGGGGATGGTATTGTTACATACAGAAGAAAGAAGAGATGTTTAAAAGCTCAATCACCTGAAATGATCAGTAGTTCTGAGGCTGGATCAGACGAGCCAGTAGAAAAGAAGAACAATGTTAAGAAGGACAACATTGTCACATACAGGAGAAAGAGAATAGGTGCAAAAGAATGTCGTTCAGTTTATGTTTCATCGGAGGGAAATAGTAGCAGAGAAGCCTGTAGCTTAAAACTAGGTCTATGGAGTCATCCCAAAGGGAAAAGAACAGGTCGCAATGCTCGAAGCAATTCCTGCAGAGCTCCTGTTCCTTCTACTCCATTTCCACTACTTGACAAAAAGGACAGTTCCCATTCTGATGAAAGGCCAGAAAGCAGCAACAATATAGCGGGGAAAGAACAATCATCGTATTGCCCACCGGTGCTTTCCTTAGATAACAACTCTGACAGAACCTTGTTTGAATTGCAATCTGGCGAGCTAGTTGGGACAGATCCTACATCTTCTGGTACGGAATGTACTGCGCCATCTAACTCTACCACTGGCATAAATGTGGGATCATCCAAATATGTATCTCATGACTATCACAAAAAGCCATGCAACAAAAACTTACCCAAATCATCTCTTATGAAAGAGCTTATTGGACTAGGTGTCGCTGAGTCGATGCCAGATTTTGCTTGGAAAGATTTGAGAAGGCGAAGAAGTATGGCCTATGTTCAAGTTCTGTTTAGCCAGCATTTGGATGATGATATCATTAAGCAGCAGAAAAAGATCATTGCACGACTGGGCCTATCCGTTGCTTCATGTTCTATGGATGCAACACACTTTATAGCAGATCAATTTGCACGTACAAGGAATATGTTGGAATTCATTGCTCTTGGTAAACCAGTGGTAACACATTTGTGGCTTGAGAGTTGTGGGGAAGCAAACTGTTTGATTAGTGAGAAAAGCTATATTCTGAGGGATGCCAAAAAGGAAAAGGAAATTGGTTTTAGCATGCTTGTTTCACTGGACTGTGCAAAACGGTGTCCGCTTCTAAAGGGTCGAAAAGTCTTCATTACTCCGAACATAAAACCTGGAAAAGAAATGATGACCAGCTTGGTGAAGACAGCTCAGGGCGAGCCAGTGGAGAAAGCTCAGATATCTGCCGCAAAGGGTAAAAAGATTTTCAATGAATTATTGATTCTTTCTTGTGAAGAAGATGAAGCAATCTGTCTACCTTTCCTTGAGAAAGATTCTTGTAAATATTTGCAGGTGCAGCAGTTTACAGTTCAGAACTTTTACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RTT107_BRCT_5

Protein Analysis

883

Amino Acids

97.32

Weight (kDa)

6.87

Isoelectric Point (pI)

57.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
BRCT_2 PF16589 799 - 866 4.2e-09 BRCT domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011125)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G03130 AT4G03130 AT4G03130 AT4G03130
fragaria_vesca FvH4_2g24660
malus_domestica MD11G1297400.v1.1 MD11G1297500.v1.1
prunus_persica Prupe.8G251900_v2.0.a1 Prupe.8G251900_v2.0.a1
pyrus_communis pycom11g26140
rosa_chinensis RchiOBHm_Chr6g0292491
rosa_laevigata RLG00000012019
rosa_multiflora Rmu_sc0001354.1_g000027
rosa_roxburghii Rroxscaffold_7G00175010
rosa_rugosa Rorug06G0227200
rosa_samantha Rh6AG340400 Rh6BG347700 Rh6CG354700 Rh6DG340500
rosa_wichuraiana Rw6G029640

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 1085, 2608
AasI GACNNNNNNGTC 2 cut(s) 1318, 1505
Acc36I ACCTGC 3 cut(s) 1028, 1085, 2608
AccB1I GGYRCC 1 cut(s) 133
AccB7I CCANNNNNTGG 2 cut(s) 169, 2104
AccBSI CCGCTC 1 cut(s) 1071
AccI GTMKAC 1 cut(s) 2581
AciI CCGC 6 cut(s) 953, 1069, 1148, 1757, 2396, 2514
AclWI GGATC 8 cut(s) 306, 390, 551, 1130, 1366, 1465, 1853, 1930
AcsI RAATTY 2 cut(s) 286, 2231
AcuI CTGAAG 1 cut(s) 780
AfaI GTAC 4 cut(s) 1083, 1876, 1885, 2215
AfiI CCNNNNNNNGG 5 cut(s) 151, 169, 549, 742, 2104
AflIII ACRYGT 1 cut(s) 867
AgeI ACCGGT 1 cut(s) 1786
AgsI TTSAA 7 cut(s) 400, 512, 548, 773, 1829, 2084, 2536
AhdI GACNNNNNGTC 1 cut(s) 2015
AjnI CCWGG 4 cut(s) 343, 424, 937, 2440
AjuI GAANNNNNNNTTGG 2 cut(s) 2334, 2366
AleI CACNNNNGTG 2 cut(s) 452, 2266
Alw21I GWGCWC 2 cut(s) 577, 1672
Alw26I GTCTC 2 cut(s) 119, 525
AlwI GGATC 8 cut(s) 306, 390, 551, 1130, 1366, 1465, 1853, 1930
AlwNI CAGNNNCTG 2 cut(s) 431, 758
AoxI GGCC 6 cut(s) 915, 931, 1209, 1733, 2073, 2152
ApeKI GCWGC 7 cut(s) 311, 899, 942, 1271, 1743, 2125, 2623
ApoI RAATTY 2 cut(s) 286, 2231
ArsI GACNNNNNNTTYG 2 cut(s) 478, 510
AseI ATTAAT 1 cut(s) 149
AsiGI ACCGGT 1 cut(s) 1786
Asp700I GAANNNNTTC 1 cut(s) 1657
AspLEI GCGC 2 cut(s) 311, 1891
AspS9I GGNCC 3 cut(s) 931, 1347, 2152
AsuHPI GGTGA 6 cut(s) 38, 466, 710, 1196, 1419, 2479
AsuII TTCGAA 1 cut(s) 730
AvaII GGWCC 1 cut(s) 1347
AxyI CCTNAGG 2 cut(s) 561, 621
BaeI ACNNNNGTAYC 2 cut(s) 1065, 1098
BanI GGYRCC 1 cut(s) 133
BanII GRGCYC 2 cut(s) 117, 1672
BbsI GAAGAC 3 cut(s) 285, 2410, 2477
Bbv12I GWGCWC 2 cut(s) 577, 1672
BbvI GCAGC 7 cut(s) 298, 886, 929, 1283, 1755, 2137, 2635
BccI CCATC 8 cut(s) 58, 167, 592, 695, 942, 1349, 1373, 1900
BciT130I CCWGG 4 cut(s) 345, 426, 939, 2442
BclI TGATCA 2 cut(s) 82, 1437
BcoDI GTCTC 2 cut(s) 119, 525
BfaI CTAG 5 cut(s) 840, 1077, 1604, 1847, 2012
BfmI CTRYAG 4 cut(s) 312, 1262, 1591, 1663
BfuAI ACCTGC 3 cut(s) 1028, 1085, 2608
BglI GCCNNNNNGGC 1 cut(s) 939
BglII AGATCT 1 cut(s) 635
BisI GCNGC 9 cut(s) 312, 900, 943, 1149, 1272, 1744, 2126, 2514, 2624
BlsI GCNGC 9 cut(s) 313, 901, 944, 1150, 1273, 1745, 2127, 2515, 2625
Bme1390I CCNGG 4 cut(s) 345, 426, 939, 2442
Bme18I GGWCC 1 cut(s) 1347
BmeRI GACNNNNNGTC 1 cut(s) 2015
BmgT120I GGNCC 3 cut(s) 931, 1347, 2152
BmiI GGNNCC 4 cut(s) 135, 342, 837, 932
BmrFI CCNGG 4 cut(s) 345, 426, 939, 2442
BmrI ACTGGG 3 cut(s) 157, 1312, 2159
BmsI GCATC 4 cut(s) 800, 2019, 2170, 2320
BmuI ACTGGG 3 cut(s) 157, 1312, 2159
BpiI GAAGAC 3 cut(s) 285, 2410, 2477
BpmI CTGGAG 2 cut(s) 408, 812
Bpu10I CCTNAGC 3 cut(s) 694, 919, 2478
Bpu14I TTCGAA 1 cut(s) 730
BpuEI CTTGAG 2 cut(s) 2294, 2612
BsaAI YACGTR 1 cut(s) 2213
BsaI GGTCTC 1 cut(s) 525
BsaJI CCNNGG 5 cut(s) 344, 1085, 1206, 1284, 1350
BsaWI WCCGGW 1 cut(s) 1786
BsaXI ACNNNNNCTCC 2 cut(s) 1081, 1111
Bsc4I CCNNNNNNNGG 5 cut(s) 151, 169, 549, 742, 2104
Bse118I RCCGGY 1 cut(s) 1786
Bse1I ACTGG 9 cut(s) 163, 208, 1318, 1469, 1912, 2154, 2252, 2379, 2489
Bse21I CCTNAGG 2 cut(s) 561, 621
Bse3DI GCAATG 3 cut(s) 1651, 2139, 2235
BseBI CCWGG 4 cut(s) 345, 426, 939, 2442
BseDI CCNNGG 5 cut(s) 344, 1085, 1206, 1284, 1350
BseLI CCNNNNNNNGG 5 cut(s) 151, 169, 549, 742, 2104
BseMI GCAATG 3 cut(s) 1651, 2139, 2235
BseNI ACTGG 9 cut(s) 163, 208, 1318, 1469, 1912, 2154, 2252, 2379, 2489
BseRI GAGGAG 3 cut(s) 578, 733, 999
BseXI GCAGC 7 cut(s) 298, 886, 929, 1283, 1755, 2137, 2635
BsgI GTGCAG 2 cut(s) 1290, 2642
BshFI GGCC 6 cut(s) 917, 933, 1211, 1735, 2075, 2154
BshNI GGYRCC 1 cut(s) 133
BshTI ACCGGT 1 cut(s) 1786
BsiHKAI GWGCWC 2 cut(s) 577, 1672
BsiSI CCGG 1 cut(s) 1787
BslFI GGGAC 2 cut(s) 499, 1867
BslI CCNNNNNNNGG 5 cut(s) 151, 169, 549, 742, 2104
BsmAI GTCTC 2 cut(s) 119, 525
BsmFI GGGAC 2 cut(s) 499, 1867
BsnI GGCC 6 cut(s) 917, 933, 1211, 1735, 2075, 2154
Bso31I GGTCTC 1 cut(s) 525
Bsp119I TTCGAA 1 cut(s) 730
Bsp1286I GDGCHC 3 cut(s) 117, 577, 1672
BspACI CCGC 6 cut(s) 953, 1069, 1148, 1757, 2396, 2514
BspANI GGCC 6 cut(s) 917, 933, 1211, 1735, 2075, 2154
BspHI TCATGA 1 cut(s) 1942
BspLI GGNNCC 4 cut(s) 135, 342, 837, 932
BspMAI CTGCAG 2 cut(s) 316, 1667
BspMI ACCTGC 3 cut(s) 1028, 1085, 2608
BspPI GGATC 8 cut(s) 306, 390, 551, 1130, 1366, 1465, 1853, 1930
BspT104I TTCGAA 1 cut(s) 730
BspT107I GGYRCC 1 cut(s) 133
BspTNI GGTCTC 1 cut(s) 525
BsrBI CCGCTC 1 cut(s) 1071
BsrDI GCAATG 3 cut(s) 1651, 2139, 2235
BsrFI RCCGGY 1 cut(s) 1786
BsrI ACTGG 9 cut(s) 163, 208, 1318, 1469, 1912, 2154, 2252, 2379, 2489
BssAI RCCGGY 1 cut(s) 1786
BssECI CCNNGG 5 cut(s) 344, 1085, 1206, 1284, 1350
BssT1I CCWWGG 2 cut(s) 1085, 1284
Bst2UI CCWGG 4 cut(s) 345, 426, 939, 2442
Bst4CI ACNGT 7 cut(s) 242, 280, 1715, 2297, 2381, 2391, 2635
Bst6I CTCTTC 2 cut(s) 1160, 1400
BstAPI GCANNNNNTGC 1 cut(s) 1662
BstBAI YACGTR 1 cut(s) 2213
BstBI TTCGAA 1 cut(s) 730
BstC8I GCNNGC 5 cut(s) 669, 1844, 2099, 2363, 2486
BstENI CCTNNNNNAGG 1 cut(s) 740
BstHHI GCGC 2 cut(s) 311, 1891
BstMAI GTCTC 2 cut(s) 119, 525
BstMWI GCNNNNNNNGC 5 cut(s) 905, 914, 939, 1662, 2623
BstNI CCWGG 4 cut(s) 345, 426, 939, 2442
BstNSI RCATGY 3 cut(s) 671, 871, 2365
BstSCI CCNGG 4 cut(s) 343, 424, 937, 2440
BstSFI CTRYAG 4 cut(s) 312, 1262, 1591, 1663
BstV1I GCAGC 7 cut(s) 298, 886, 929, 1283, 1755, 2137, 2635
BstV2I GAAGAC 3 cut(s) 285, 2410, 2477
BstX2I RGATCY 3 cut(s) 635, 1135, 1858
BstYI RGATCY 3 cut(s) 635, 1135, 1858
Bsu36I CCTNAGG 2 cut(s) 561, 621
BsuRI GGCC 6 cut(s) 917, 933, 1211, 1735, 2075, 2154
BtgZI GCGATG 2 cut(s) 201, 986
BtsIMutI CAGTG 5 cut(s) 247, 1905, 2259, 2372, 2496
BveI ACCTGC 3 cut(s) 1028, 1085, 2608
Cac8I GCNNGC 5 cut(s) 669, 1844, 2099, 2363, 2486
CaiI CAGNNNCTG 2 cut(s) 431, 758
CciI TCATGA 1 cut(s) 1942
CfoI GCGC 2 cut(s) 311, 1891
Cfr10I RCCGGY 1 cut(s) 1786
Cfr13I GGNCC 3 cut(s) 931, 1347, 2152
Csp6I GTAC 4 cut(s) 1082, 1875, 1884, 2214
CspAI ACCGGT 1 cut(s) 1786
CviAII CATG 6 cut(s) 668, 868, 1943, 1962, 2169, 2362
CviQI GTAC 4 cut(s) 1082, 1875, 1884, 2214
DraI TTTAAA 1 cut(s) 1416
DrdI GACNNNNNNGTC 2 cut(s) 1318, 1505
DriI GACNNNNNGTC 1 cut(s) 2015
DseDI GACNNNNNNGTC 2 cut(s) 1318, 1505
Eam1104I CTCTTC 2 cut(s) 1160, 1400
Eam1105I GACNNNNNGTC 1 cut(s) 2015
EarI CTCTTC 2 cut(s) 1160, 1400
Ecl136II GAGCTC 1 cut(s) 1670
Eco130I CCWWGG 2 cut(s) 1085, 1284
Eco147I AGGCCT 1 cut(s) 917
Eco24I GRGCYC 2 cut(s) 117, 1672
Eco31I GGTCTC 1 cut(s) 525
Eco32I GATATC 2 cut(s) 2116, 2508
Eco47I GGWCC 1 cut(s) 1347
Eco53kI GAGCTC 1 cut(s) 1670
Eco57I CTGAAG 1 cut(s) 780
Eco81I CCTNAGG 2 cut(s) 561, 621
EcoICRI GAGCTC 1 cut(s) 1670
EcoNI CCTNNNNNAGG 1 cut(s) 740
EcoRI GAATTC 1 cut(s) 2231
EcoRII CCWGG 4 cut(s) 343, 424, 937, 2440
EcoRV GATATC 2 cut(s) 2116, 2508
EcoT14I CCWWGG 2 cut(s) 1085, 1284
EcoT22I ATGCAT 1 cut(s) 793
EcoT38I GRGCYC 2 cut(s) 117, 1672
ErhI CCWWGG 2 cut(s) 1085, 1284
FaeI CATG 6 cut(s) 671, 871, 1946, 1965, 2172, 2365
FalI AAGNNNNNCTT 2 cut(s) 219, 251
FaqI GGGAC 2 cut(s) 499, 1867
FatI CATG 6 cut(s) 667, 867, 1942, 1961, 2168, 2361
FauI CCCGC 1 cut(s) 1750
FauNDI CATATG 1 cut(s) 925
FbaI TGATCA 2 cut(s) 82, 1437
FblI GTMKAC 1 cut(s) 2581
Fnu4HI GCNGC 9 cut(s) 312, 900, 943, 1149, 1272, 1744, 2126, 2514, 2624
FriOI GRGCYC 2 cut(s) 117, 1672
Fsp4HI GCNGC 9 cut(s) 312, 900, 943, 1149, 1272, 1744, 2126, 2514, 2624
FspBI CTAG 5 cut(s) 840, 1077, 1604, 1847, 2012
GlaI GCGC 2 cut(s) 310, 1890
GluI GCNGC 9 cut(s) 312, 900, 943, 1149, 1272, 1744, 2126, 2514, 2624
GsuI CTGGAG 2 cut(s) 408, 812
HaeIII GGCC 6 cut(s) 917, 933, 1211, 1735, 2075, 2154
HapII CCGG 1 cut(s) 1787
HhaI GCGC 2 cut(s) 311, 1891
Hin1II CATG 6 cut(s) 671, 871, 1946, 1965, 2172, 2365
Hin6I GCGC 2 cut(s) 309, 1889
HinP1I GCGC 2 cut(s) 309, 1889
HincII GTYRAC 3 cut(s) 331, 865, 1323
HindII GTYRAC 3 cut(s) 331, 865, 1323
HpaII CCGG 1 cut(s) 1787
HphI GGTGA 6 cut(s) 38, 466, 710, 1196, 1419, 2479
Hpy166II GTNNAC 7 cut(s) 331, 865, 1057, 1323, 2249, 2582, 2631
Hpy188III TCNNGA 9 cut(s) 338, 560, 620, 966, 1139, 1249, 1299, 1341, 1943
Hpy8I GTNNAC 7 cut(s) 331, 865, 1057, 1323, 2249, 2582, 2631
Hpy99I CGWCG 1 cut(s) 407
HpyAV CCTTC 6 cut(s) 755, 842, 1338, 1489, 1689, 2052
HpyCH4III ACNGT 7 cut(s) 242, 280, 1715, 2297, 2381, 2391, 2635
HpyCH4IV ACGT 4 cut(s) 327, 395, 1325, 2212
HpyF10VI GCNNNNNNNGC 5 cut(s) 905, 914, 939, 1662, 2623
HpySE526I ACGT 4 cut(s) 327, 395, 1325, 2212
Hsp92II CATG 6 cut(s) 671, 871, 1946, 1965, 2172, 2365
HspAI GCGC 2 cut(s) 309, 1889
Ksp22I TGATCA 2 cut(s) 82, 1437
LmnI GCTCC 4 cut(s) 572, 720, 1076, 1675
Lsp1109I GCAGC 7 cut(s) 298, 886, 929, 1283, 1755, 2137, 2635
LweI GCATC 4 cut(s) 800, 2019, 2170, 2320
MaeI CTAG 5 cut(s) 840, 1077, 1604, 1847, 2012
MaeII ACGT 4 cut(s) 327, 395, 1325, 2212
MaeIII GTNAC 7 cut(s) 274, 391, 469, 1153, 1387, 1507, 2257
MbiI CCGCTC 1 cut(s) 1071
MflI RGATCY 3 cut(s) 635, 1135, 1858
MhlI GDGCHC 3 cut(s) 117, 577, 1672
MlyI GAGTC 6 cut(s) 326, 481, 788, 1196, 1624, 2033
MmeI TCCRAC 1 cut(s) 2208
Mph1103I ATGCAT 1 cut(s) 793
MroXI GAANNNNTTC 1 cut(s) 1657
MslI CAYNNNNRTG 6 cut(s) 452, 672, 1725, 1916, 2106, 2266
MspA1I CMGCKG 2 cut(s) 832, 1274
MspI CCGG 1 cut(s) 1787
MspR9I CCNGG 4 cut(s) 345, 426, 939, 2442
MvaI CCWGG 4 cut(s) 345, 426, 939, 2442
MwoI GCNNNNNNNGC 5 cut(s) 905, 914, 939, 1662, 2623
NdeI CATATG 1 cut(s) 925
NlaIII CATG 6 cut(s) 671, 871, 1946, 1965, 2172, 2365
NlaIV GGNNCC 4 cut(s) 135, 342, 837, 932
NmeAIII GCCGAG 1 cut(s) 1231
NmuCI GTSAC 3 cut(s) 274, 391, 1507
NsiI ATGCAT 1 cut(s) 793
NspI RCATGY 3 cut(s) 671, 871, 2365
NspV TTCGAA 1 cut(s) 730
OliI CACNNNNGTG 2 cut(s) 452, 2266
PaeI GCATGC 2 cut(s) 671, 2365
PagI TCATGA 1 cut(s) 1942
PaqCI CACCTGC 2 cut(s) 1085, 2608
PceI AGGCCT 1 cut(s) 917
PciI ACATGT 1 cut(s) 867
PcsI WCGNNNNNNNCGW 1 cut(s) 1648
PdmI GAANNNNTTC 1 cut(s) 1657
PfeI GAWTC 7 cut(s) 35, 353, 602, 755, 1232, 2548, 2600
PflMI CCANNNNNTGG 2 cut(s) 169, 2104
PfoI TCCNGGA 1 cut(s) 424
PinAI ACCGGT 1 cut(s) 1786
PkrI GCNGC 9 cut(s) 313, 901, 944, 1150, 1273, 1745, 2127, 2515, 2625
PleI GAGTC 6 cut(s) 326, 481, 787, 1195, 1623, 2032
PpsI GAGTC 6 cut(s) 326, 481, 787, 1195, 1623, 2032
Ppu21I YACGTR 1 cut(s) 2213
PscI ACATGT 1 cut(s) 867
PshBI ATTAAT 1 cut(s) 149
Psp124BI GAGCTC 1 cut(s) 1672
Psp6I CCWGG 4 cut(s) 343, 424, 937, 2440
PspGI CCWGG 4 cut(s) 343, 424, 937, 2440
PspN4I GGNNCC 4 cut(s) 135, 342, 837, 932
PspPI GGNCC 3 cut(s) 931, 1347, 2152
PstI CTGCAG 2 cut(s) 316, 1667
PstNI CAGNNNCTG 2 cut(s) 431, 758
PsuI RGATCY 3 cut(s) 635, 1135, 1858
PvuII CAGCTG 2 cut(s) 832, 1274
RsaI GTAC 4 cut(s) 1083, 1876, 1885, 2215
RsaNI GTAC 4 cut(s) 1082, 1875, 1884, 2214
RseI CAYNNNNRTG 6 cut(s) 452, 672, 1725, 1916, 2106, 2266
SacI GAGCTC 1 cut(s) 1672
SatI GCNGC 9 cut(s) 312, 900, 943, 1149, 1272, 1744, 2126, 2514, 2624
Sau96I GGNCC 3 cut(s) 931, 1347, 2152
SchI GAGTC 6 cut(s) 326, 481, 788, 1196, 1624, 2033
ScrFI CCNGG 4 cut(s) 345, 426, 939, 2442
SduI GDGCHC 3 cut(s) 117, 577, 1672
SfaNI GCATC 4 cut(s) 800, 2019, 2170, 2320
SfcI CTRYAG 4 cut(s) 312, 1262, 1591, 1663
SfuI TTCGAA 1 cut(s) 730
SgrAI CRCCGGYG 1 cut(s) 1786
SinI GGWCC 1 cut(s) 1347
SmiMI CAYNNNNRTG 6 cut(s) 452, 672, 1725, 1916, 2106, 2266
SmlI CTYRAG 2 cut(s) 2273, 2591
SmoI CTYRAG 2 cut(s) 2273, 2591
SphI GCATGC 2 cut(s) 671, 2365
SseBI AGGCCT 1 cut(s) 917
SsiI CCGC 6 cut(s) 953, 1069, 1148, 1757, 2396, 2514
SspI AATATT 1 cut(s) 2612
SspMI CTAG 5 cut(s) 840, 1077, 1604, 1847, 2012
SstI GAGCTC 1 cut(s) 1672
StuI AGGCCT 1 cut(s) 917
StyD4I CCNGG 4 cut(s) 343, 424, 937, 2440
StyI CCWWGG 2 cut(s) 1085, 1284
TaaI ACNGT 7 cut(s) 242, 280, 1715, 2297, 2381, 2391, 2635
TaiI ACGT 4 cut(s) 330, 398, 1328, 2215
TaqI TCGA 6 cut(s) 301, 580, 730, 1651, 2027, 2410
TaqII GACCGA 1 cut(s) 1364
TatI WGTACW 1 cut(s) 1883
TauI GCSGC 2 cut(s) 1151, 2516
TfiI GAWTC 7 cut(s) 35, 353, 602, 755, 1232, 2548, 2600
TscAI CASTG 5 cut(s) 247, 1912, 2259, 2379, 2496
TseFI GTSAC 3 cut(s) 274, 391, 1507
TseI GCWGC 7 cut(s) 311, 899, 942, 1271, 1743, 2125, 2623
Tsp45I GTSAC 3 cut(s) 274, 391, 1507
TspGWI ACGGA 2 cut(s) 1892, 2149
TspRI CASTG 5 cut(s) 247, 1912, 2259, 2379, 2496
Van91I CCANNNNNTGG 2 cut(s) 169, 2104
VpaK11BI GGWCC 1 cut(s) 1347
VspI ATTAAT 1 cut(s) 149
XagI CCTNNNNNAGG 1 cut(s) 740
XapI RAATTY 2 cut(s) 286, 2231
XceI RCATGY 3 cut(s) 671, 871, 2365
XcmI CCANNNNNNNNNTGG 2 cut(s) 170, 2040
XmiI GTMKAC 1 cut(s) 2581
XmnI GAANNNNTTC 1 cut(s) 1657
XspI CTAG 5 cut(s) 840, 1077, 1604, 1847, 2012
Zsp2I ATGCAT 1 cut(s) 793
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.