AT4G03340

glycosyltransferase family 14 protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Reverse (-)
1467727 .. 1470080
2354 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G03340.1

Sequence Viewer

Length: 1347 bp
ATGAAGAAAGTGTATAGGAAGCTGATTTGGATCAGAGACCCATTAGCGAGATTGAAGAGACATGTTAGTTCACATTCAGGGTTTAGGTTTTTCAGAGATAGAAAATGGATGTTCCCTTTTTTAGCAAGCTTGGTTTTGTCGGTTACTCTTTTGATGTCTGTCCTTTATGTCCAACTCGAGACTTCTTATGTGGAAGAGCCATTGCCTTTTGATAATCTCTCAGAAGAAACAAATGATTACTTTGTAGAATCACAATTGAGAATGTCTTTGAATTCGACGTTGGATTCGACTTCTTCAGAGGTTCCTAGGTTAGCTTATTTGATCTCGGGGACGAAAGGTGATAGTCTTAGGATGATGAGGACTTTGCAAGCTGTGTATCATCCAAGAAATCAGTATGTTCTGCATTTGGATCTTGAAGCTCCTCCTAAGGAAAGGCTTGAGCTTGCAATGTCTGTGAAGAGTGATCAAACTTTCCGTGAAGTTGAGAACGTTCGTGTTATGTCTCAGTCTAATTTGGTTACTTATAAAGGCCCTACAATGATTGCTTGCACGCTTCAGGCCGTGGCGATTTTGCTTAAAGAAAGCTTGGATTGGGATTGGTTCATCAATCTTAGTGCCTCGGATTATCCTCTTGTGACACAAGATGATATGCTGTATGTGTTTGCGAATTTGTCTCGGAATGTCAATTTCATTGAACATATGAAGCTCACCGGGTGGAAACTGAACCAAAGGGCCAAATCAATCATTGTTGATCCCGGTCTTTACCTATCGAAGAAAACCGAAATTGCTTGGACTACTCAACACCGTTCACTTCCCACATCTTTCACGCTGTTCACAGGCTCGGCGTGGGTAGTTCTGACTCGGTCTTTTCTTGAATACTCAATCTTGGGATGGGACAATTTTCCGAGGACGATCTTGATGTACTACACCAACTTTGTATCCTCTCCAGAAGGATACTTTCACACACTGATATGTAACACTGAAGAGTTCAAGAGCACCGCGATTGGGCATGACCTGCACTACATTGCTTGGGACTATCCTCCAAAGCAACACCCAAACTCTTTATCGATGAAGGATTTCGACAAGATGGTCAAAAGCAAAGCCCCATTTGCTCGAAAGTTCCACAAGAACGATCCTGTATTAGACAAGATCGATAGAGAGCTCTTAGGCCGCACTCATCGGTTTTCCTCAGGAGCTTGGTGCATTGGTAGCTCGGAAAATGGCGCTGATCCGTGCTCTGTCCGCGGGGATGACTCTGCTTTGAAACCAGGCCCTGGTGCTGAGAGATTAAAGGAGCTTCTTCAGACACTTTTATCTGATGAGTTCAGAATAAAACAATGTTCATGA

Protein Analysis

448

Amino Acids

51.67

Weight (kDa)

8.59

Isoelectric Point (pI)

37.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Branch PF02485 104 - 363 4.5e-77 Core-2/I-Branching enzyme
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 525
AasI GACNNNNNNGTC 1 cut(s) 1088
Acc36I ACCTGC 1 cut(s) 1023
AccB7I CCANNNNNTGG 1 cut(s) 1274
AccII CGCG 2 cut(s) 1001, 1245
AciI CCGC 4 cut(s) 999, 1171, 1243, 1245
AclI AACGTT 1 cut(s) 489
AclWI GGATC 5 cut(s) 38, 417, 746, 1127, 1223
AcsI RAATTY 2 cut(s) 271, 667
AcuI CTGAAG 4 cut(s) 279, 539, 1002, 1286
AdeI CACNNNGTG 1 cut(s) 714
AfaI GTAC 1 cut(s) 923
AfiI CCNNNNNNNGG 2 cut(s) 1005, 1274
AflIII ACRYGT 1 cut(s) 61
AgsI TTSAA 7 cut(s) 55, 271, 416, 695, 875, 991, 1264
AjnI CCWGG 2 cut(s) 1267, 1273
AjuI GAANNNNNNNTTGG 2 cut(s) 263, 295
Alw21I GWGCWC 3 cut(s) 998, 1164, 1238
Alw26I GTCTC 5 cut(s) 30, 52, 173, 507, 678
AlwI GGATC 5 cut(s) 38, 417, 746, 1127, 1223
AlwNI CAGNNNCTG 1 cut(s) 1274
Ama87I CYCGRG 2 cut(s) 176, 325
AoxI GGCC 5 cut(s) 529, 558, 732, 1168, 1270
ApoI RAATTY 2 cut(s) 271, 667
ArsI GACNNNNNNTTYG 2 cut(s) 268, 300
Asp700I GAANNNNTTC 1 cut(s) 1076
AspA2I CCTAGG 1 cut(s) 305
AspLEI GCGC 1 cut(s) 1226
AspS9I GGNCC 3 cut(s) 530, 732, 1271
AsuC2I CCSGG 2 cut(s) 712, 756
AsuHPI GGTGA 2 cut(s) 350, 700
AvaI CYCGRG 2 cut(s) 176, 325
AvrII CCTAGG 1 cut(s) 305
AxyI CCTNAGG 2 cut(s) 426, 1189
BanII GRGCYC 1 cut(s) 1164
Bbv12I GWGCWC 3 cut(s) 998, 1164, 1238
BccI CCATC 2 cut(s) 885, 1081
BceAI ACGGC 1 cut(s) 545
BciT130I CCWGG 2 cut(s) 1269, 1275
BciVI GTATCC 2 cut(s) 947, 949
BclI TGATCA 1 cut(s) 463
BcnI CCSGG 2 cut(s) 712, 756
BcoDI GTCTC 5 cut(s) 30, 52, 173, 507, 678
BfaI CTAG 1 cut(s) 306
BfoI RGCGCY 1 cut(s) 1227
BfuAI ACCTGC 1 cut(s) 1023
BfuI GTATCC 2 cut(s) 947, 949
BisI GCNGC 1 cut(s) 1171
BlnI CCTAGG 1 cut(s) 305
BlsI GCNGC 1 cut(s) 1172
Bme1390I CCNGG 4 cut(s) 712, 756, 1269, 1275
BmeT110I CYCGRG 2 cut(s) 176, 325
BmgT120I GGNCC 3 cut(s) 530, 732, 1271
BmiI GGNNCC 1 cut(s) 303
BmrFI CCNGG 4 cut(s) 712, 756, 1269, 1275
BpmI CTGGAG 1 cut(s) 930
BpuEI CTTGAG 1 cut(s) 458
BpuMI CCSGG 2 cut(s) 712, 756
Bsa29I ATCGAT 2 cut(s) 1067, 1152
BsaBI GATNNNNATC 1 cut(s) 29
BsaI GGTCTC 1 cut(s) 30
BsaJI CCNNGG 6 cut(s) 305, 561, 618, 905, 1243, 1273
Bsc4I CCNNNNNNNGG 2 cut(s) 1005, 1274
Bse21I CCTNAGG 2 cut(s) 426, 1189
Bse3DI GCAATG 3 cut(s) 200, 453, 1023
Bse8I GATNNNNATC 1 cut(s) 29
BseBI CCWGG 2 cut(s) 1269, 1275
BseCI ATCGAT 2 cut(s) 1067, 1152
BseDI CCNNGG 6 cut(s) 305, 561, 618, 905, 1243, 1273
BseGI GGATG 5 cut(s) 114, 357, 379, 896, 1255
BseJI GATNNNNATC 1 cut(s) 29
BseLI CCNNNNNNNGG 2 cut(s) 1005, 1274
BseMI GCAATG 3 cut(s) 200, 453, 1023
BseMII CTCAG 4 cut(s) 234, 518, 1203, 1272
BseRI GAGGAG 1 cut(s) 411
BsgI GTGCAG 1 cut(s) 1001
Bsh1236I CGCG 2 cut(s) 1001, 1245
BshFI GGCC 5 cut(s) 531, 560, 734, 1170, 1272
BshVI ATCGAT 2 cut(s) 1067, 1152
BsiHKAI GWGCWC 3 cut(s) 998, 1164, 1238
BsiHKCI CYCGRG 2 cut(s) 176, 325
BsiSI CCGG 2 cut(s) 711, 756
BslFI GGGAC 3 cut(s) 343, 908, 1046
BslI CCNNNNNNNGG 2 cut(s) 1005, 1274
BsmAI GTCTC 5 cut(s) 30, 52, 173, 507, 678
BsmFI GGGAC 3 cut(s) 343, 908, 1046
BsnI GGCC 5 cut(s) 531, 560, 734, 1170, 1272
Bso31I GGTCTC 1 cut(s) 30
BsoBI CYCGRG 2 cut(s) 176, 325
Bsp1286I GDGCHC 3 cut(s) 998, 1164, 1238
Bsp143I GATC 9 cut(s) 30, 321, 409, 463, 751, 912, 1132, 1149, 1228
BspACI CCGC 4 cut(s) 999, 1171, 1243, 1245
BspANI GGCC 5 cut(s) 531, 560, 734, 1170, 1272
BspCNI CTCAG 4 cut(s) 233, 517, 1202, 1273
BspDI ATCGAT 2 cut(s) 1067, 1152
BspFNI CGCG 2 cut(s) 1001, 1245
BspHI TCATGA 1 cut(s) 1343
BspLI GGNNCC 1 cut(s) 303
BspMI ACCTGC 1 cut(s) 1023
BspPI GGATC 5 cut(s) 38, 417, 746, 1127, 1223
BspQI GCTCTTC 1 cut(s) 189
BspTNI GGTCTC 1 cut(s) 30
BsrDI GCAATG 3 cut(s) 200, 453, 1023
BssECI CCNNGG 6 cut(s) 305, 561, 618, 905, 1243, 1273
BssMI GATC 9 cut(s) 30, 321, 409, 463, 751, 912, 1132, 1149, 1228
BssT1I CCWWGG 1 cut(s) 305
Bst2UI CCWGG 2 cut(s) 1269, 1275
Bst4CI ACNGT 1 cut(s) 806
Bst6I CTCTTC 4 cut(s) 50, 189, 452, 978
BstAPI GCANNNNNTGC 1 cut(s) 1015
BstC8I GCNNGC 5 cut(s) 127, 369, 444, 547, 551
BstDEI CTNAG 8 cut(s) 220, 347, 426, 504, 611, 1165, 1189, 1281
BstDSI CCRYGG 2 cut(s) 561, 1243
BstF5I GGATG 5 cut(s) 114, 357, 379, 896, 1255
BstFNI CGCG 2 cut(s) 1001, 1245
BstH2I RGCGCY 1 cut(s) 1227
BstHHI GCGC 1 cut(s) 1226
BstKTI GATC 9 cut(s) 33, 324, 412, 466, 754, 915, 1135, 1152, 1231
BstMAI GTCTC 5 cut(s) 30, 52, 173, 507, 678
BstMBI GATC 9 cut(s) 30, 321, 409, 463, 751, 912, 1132, 1149, 1228
BstMWI GCNNNNNNNGC 4 cut(s) 1015, 1109, 1209, 1242
BstNI CCWGG 2 cut(s) 1269, 1275
BstNSI RCATGY 1 cut(s) 65
BstSCI CCNGG 4 cut(s) 710, 754, 1267, 1273
BstUI CGCG 2 cut(s) 1001, 1245
BstX2I RGATCY 1 cut(s) 409
BstYI RGATCY 1 cut(s) 409
Bsu15I ATCGAT 2 cut(s) 1067, 1152
Bsu36I CCTNAGG 2 cut(s) 426, 1189
BsuI GTATCC 2 cut(s) 947, 949
BsuRI GGCC 5 cut(s) 531, 560, 734, 1170, 1272
BsuTUI ATCGAT 2 cut(s) 1067, 1152
BtgI CCRYGG 2 cut(s) 561, 1243
BtsCI GGATG 5 cut(s) 114, 357, 379, 896, 1255
BtsIMutI CAGTG 2 cut(s) 965, 978
BveI ACCTGC 1 cut(s) 1023
Cac8I GCNNGC 5 cut(s) 127, 369, 444, 547, 551
CaiI CAGNNNCTG 1 cut(s) 1274
CciI TCATGA 1 cut(s) 1343
CfoI GCGC 1 cut(s) 1226
Cfr13I GGNCC 3 cut(s) 530, 732, 1271
Cfr42I CCGCGG 1 cut(s) 1246
ClaI ATCGAT 2 cut(s) 1067, 1152
Csp6I GTAC 1 cut(s) 922
CviAII CATG 3 cut(s) 62, 1010, 1344
CviQI GTAC 1 cut(s) 922
DdeI CTNAG 8 cut(s) 220, 347, 426, 504, 611, 1165, 1189, 1281
DpnI GATC 9 cut(s) 32, 323, 411, 465, 753, 914, 1134, 1151, 1230
DpnII GATC 9 cut(s) 30, 321, 409, 463, 751, 912, 1132, 1149, 1228
DraIII CACNNNGTG 1 cut(s) 714
DrdI GACNNNNNNGTC 1 cut(s) 1088
DseDI GACNNNNNNGTC 1 cut(s) 1088
Eam1104I CTCTTC 4 cut(s) 50, 189, 452, 978
EarI CTCTTC 4 cut(s) 50, 189, 452, 978
Ecl136II GAGCTC 1 cut(s) 1162
Eco130I CCWWGG 1 cut(s) 305
Eco24I GRGCYC 1 cut(s) 1164
Eco31I GGTCTC 1 cut(s) 30
Eco53kI GAGCTC 1 cut(s) 1162
Eco57I CTGAAG 4 cut(s) 279, 539, 1002, 1286
Eco81I CCTNAGG 2 cut(s) 426, 1189
Eco88I CYCGRG 2 cut(s) 176, 325
EcoICRI GAGCTC 1 cut(s) 1162
EcoO109I RGGNCCY 2 cut(s) 530, 1271
EcoRI GAATTC 1 cut(s) 271
EcoRII CCWGG 2 cut(s) 1267, 1273
EcoT14I CCWWGG 1 cut(s) 305
EcoT38I GRGCYC 1 cut(s) 1164
ErhI CCWWGG 1 cut(s) 305
FaeI CATG 3 cut(s) 65, 1013, 1347
FaqI GGGAC 3 cut(s) 343, 908, 1046
FatI CATG 3 cut(s) 61, 1009, 1343
FauI CCCGC 1 cut(s) 1238
FauNDI CATATG 1 cut(s) 699
FbaI TGATCA 1 cut(s) 463
Fnu4HI GCNGC 1 cut(s) 1171
FokI GGATG 5 cut(s) 121, 364, 366, 903, 1262
FriOI GRGCYC 1 cut(s) 1164
Fsp4HI GCNGC 1 cut(s) 1171
FspBI CTAG 1 cut(s) 306
GlaI GCGC 1 cut(s) 1225
GluI GCNGC 1 cut(s) 1171
GsuI CTGGAG 1 cut(s) 930
HaeII RGCGCY 1 cut(s) 1227
HaeIII GGCC 5 cut(s) 531, 560, 734, 1170, 1272
HapII CCGG 2 cut(s) 711, 756
HhaI GCGC 1 cut(s) 1226
Hin1II CATG 3 cut(s) 65, 1013, 1347
Hin6I GCGC 1 cut(s) 1224
HinP1I GCGC 1 cut(s) 1224
HindIII AAGCTT 2 cut(s) 127, 583
HinfI GANTC 4 cut(s) 248, 284, 859, 1253
HpaII CCGG 2 cut(s) 711, 756
HphI GGTGA 2 cut(s) 350, 700
Hpy166II GTNNAC 3 cut(s) 71, 809, 834
Hpy188III TCNNGA 8 cut(s) 178, 413, 872, 916, 947, 991, 1191, 1344
Hpy8I GTNNAC 3 cut(s) 71, 809, 834
Hpy99I CGWCG 1 cut(s) 280
HpyAV CCTTC 2 cut(s) 944, 1066
HpyCH4III ACNGT 1 cut(s) 806
HpyCH4IV ACGT 2 cut(s) 278, 489
HpyCH4V TGCA 6 cut(s) 367, 403, 446, 549, 1018, 1203
HpyF10VI GCNNNNNNNGC 4 cut(s) 1015, 1109, 1209, 1242
HpyF3I CTNAG 8 cut(s) 220, 347, 426, 504, 611, 1165, 1189, 1281
HpySE526I ACGT 2 cut(s) 278, 489
Hsp92II CATG 3 cut(s) 65, 1013, 1347
HspAI GCGC 1 cut(s) 1224
Ksp22I TGATCA 1 cut(s) 463
KspI CCGCGG 1 cut(s) 1246
Kzo9I GATC 9 cut(s) 30, 321, 409, 463, 751, 912, 1132, 1149, 1228
LguI GCTCTTC 1 cut(s) 189
LmnI GCTCC 3 cut(s) 424, 1193, 1294
MaeI CTAG 1 cut(s) 306
MaeII ACGT 2 cut(s) 278, 489
MaeIII GTNAC 4 cut(s) 142, 517, 634, 974
MalI GATC 9 cut(s) 32, 323, 411, 465, 753, 914, 1134, 1151, 1230
MboI GATC 9 cut(s) 30, 321, 409, 463, 751, 912, 1132, 1149, 1228
MboII GAAGA 9 cut(s) 16, 67, 206, 236, 285, 469, 784, 995, 1292
MfeI CAATTG 1 cut(s) 254
MflI RGATCY 1 cut(s) 409
MhlI GDGCHC 3 cut(s) 998, 1164, 1238
MluCI AATT 7 cut(s) 254, 271, 511, 667, 685, 783, 898
MlyI GAGTC 2 cut(s) 853, 1247
MmeI TCCRAC 2 cut(s) 196, 261
MnlI CCTC 9 cut(s) 292, 351, 432, 628, 639, 900, 952, 1050, 1198
MroXI GAANNNNTTC 1 cut(s) 1076
MseI TTAA 2 cut(s) 576, 1289
MslI CAYNNNNRTG 1 cut(s) 970
MspA1I CMGCKG 1 cut(s) 1245
MspI CCGG 2 cut(s) 711, 756
MspR9I CCNGG 4 cut(s) 712, 756, 1269, 1275
MunI CAATTG 1 cut(s) 254
MvaI CCWGG 2 cut(s) 1269, 1275
MvnI CGCG 2 cut(s) 1001, 1245
MwoI GCNNNNNNNGC 4 cut(s) 1015, 1109, 1209, 1242
NciI CCSGG 2 cut(s) 712, 756
NdeI CATATG 1 cut(s) 699
NdeII GATC 9 cut(s) 30, 321, 409, 463, 751, 912, 1132, 1149, 1228
NlaIII CATG 3 cut(s) 65, 1013, 1347
NlaIV GGNNCC 1 cut(s) 303
NmeAIII GCCGAG 1 cut(s) 821
NmuCI GTSAC 1 cut(s) 634
NspI RCATGY 1 cut(s) 65
PaeR7I CTCGAG 1 cut(s) 176
PagI TCATGA 1 cut(s) 1343
PciI ACATGT 1 cut(s) 61
PciSI GCTCTTC 1 cut(s) 189
PcsI WCGNNNNNNNCGW 1 cut(s) 284
PdmI GAANNNNTTC 1 cut(s) 1076
PfeI GAWTC 2 cut(s) 248, 284
PflFI GACNNNGTC 1 cut(s) 862
PflMI CCANNNNNTGG 1 cut(s) 1274
PkrI GCNGC 1 cut(s) 1172
PleI GAGTC 2 cut(s) 853, 1247
PpsI GAGTC 2 cut(s) 853, 1247
PscI ACATGT 1 cut(s) 61
PsiI TTATAA 1 cut(s) 525
Psp124BI GAGCTC 1 cut(s) 1164
Psp1406I AACGTT 1 cut(s) 489
Psp6I CCWGG 2 cut(s) 1267, 1273
PspGI CCWGG 2 cut(s) 1267, 1273
PspN4I GGNNCC 1 cut(s) 303
PspPI GGNCC 3 cut(s) 530, 732, 1271
PstNI CAGNNNCTG 1 cut(s) 1274
PsuI RGATCY 1 cut(s) 409
PsyI GACNNNGTC 1 cut(s) 862
RsaI GTAC 1 cut(s) 923
RsaNI GTAC 1 cut(s) 922
RseI CAYNNNNRTG 1 cut(s) 970
SacI GAGCTC 1 cut(s) 1164
SacII CCGCGG 1 cut(s) 1246
SapI GCTCTTC 1 cut(s) 189
SaqAI TTAA 2 cut(s) 576, 1289
SatI GCNGC 1 cut(s) 1171
Sau3AI GATC 9 cut(s) 30, 321, 409, 463, 751, 912, 1132, 1149, 1228
Sau96I GGNCC 3 cut(s) 530, 732, 1271
SchI GAGTC 2 cut(s) 853, 1247
ScrFI CCNGG 4 cut(s) 712, 756, 1269, 1275
SduI GDGCHC 3 cut(s) 998, 1164, 1238
Sfr274I CTCGAG 1 cut(s) 176
Sfr303I CCGCGG 1 cut(s) 1246
SgrBI CCGCGG 1 cut(s) 1246
SlaI CTCGAG 1 cut(s) 176
SmiMI CAYNNNNRTG 1 cut(s) 970
SmlI CTYRAG 2 cut(s) 176, 437
SmoI CTYRAG 2 cut(s) 176, 437
Sse9I AATT 7 cut(s) 254, 271, 511, 667, 685, 783, 898
SsiI CCGC 4 cut(s) 999, 1171, 1243, 1245
SspMI CTAG 1 cut(s) 306
SstI GAGCTC 1 cut(s) 1164
StyD4I CCNGG 4 cut(s) 710, 754, 1267, 1273
StyI CCWWGG 1 cut(s) 305
TaaI ACNGT 1 cut(s) 806
TaiI ACGT 2 cut(s) 281, 492
TaqI TCGA 8 cut(s) 177, 275, 287, 770, 1067, 1080, 1114, 1152
TaqII GACCGA 1 cut(s) 852
TasI AATT 7 cut(s) 254, 271, 511, 667, 685, 783, 898
TatI WGTACW 1 cut(s) 921
TauI GCSGC 1 cut(s) 1173
TfiI GAWTC 2 cut(s) 248, 284
Tru1I TTAA 2 cut(s) 576, 1289
Tru9I TTAA 2 cut(s) 576, 1289
TscAI CASTG 2 cut(s) 972, 985
TseFI GTSAC 1 cut(s) 634
Tsp45I GTSAC 1 cut(s) 634
TspDTI ATGAA 6 cut(s) 17, 592, 679, 716, 1085, 1332
TspGWI ACGGA 2 cut(s) 464, 1221
TspRI CASTG 2 cut(s) 972, 985
Tth111I GACNNNGTC 1 cut(s) 862
Van91I CCANNNNNTGG 1 cut(s) 1274
XapI RAATTY 2 cut(s) 271, 667
XceI RCATGY 1 cut(s) 65
XhoI CTCGAG 1 cut(s) 176
XmaJI CCTAGG 1 cut(s) 305
XmnI GAANNNNTTC 1 cut(s) 1076
XspI CTAG 1 cut(s) 306
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.