Prupe.3G232800_v2.0.a1

Xylosyltransferase 1-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Reverse (-)
22912611 .. 22916744
4134 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G232800.7

Sequence Viewer

Length: 1308 bp
ATGAGTATGAGGAAGTATATGAATCCCCACTCAGCAAGGGTCTTTGGTGATAGGGTTTGGGTTATTCCATTCGTTGCTAGCTTGATCATATTCATTACCCTTTTTTTCTCGGGCATTTCTGGGCTGTTTACCTCCCCACATGGTGGAGAGCAGTTGCCATTTGACATTATCTCCTTCTCAAAATCGGATGACTCAAATGAGTATTTTGTTGAATCTGATTTGAAAAGATCATTGGAAACCAATGGGCGTTCTGAAATTGGGGCACCTAGATTAGCATATCTTATATCAGGTACAAAGGGTGATAGCCATAGGATGATGAGGACTTTAAGCGCGGTATATCATCCAAGAAATCAATATATCCTACATTTGGATCTTGAGGCTCCGCCTCGTGAAAGGTTGGAATTGGCAAGTTCAGTGAAGGCTGATCCTACTTTTAGTGAAGTGGAGAATGTGCGTGTTATGGCACAATCCAATTTGGTGACGTATAAGGGCCCTACAATGATTGCTTGTACCTTACAAGCCATTTCCATTCTGTTAAAGGAGAGCTCAGAGTGGGACTGGTTTATAAACCTCAGTGCGTCAGATTATCCTCTCATGACACAAGATGATTTGCTTCATGCTTTCTCCAATCTGTCTAGAAACCTCAACTTTATTGAACTTATGCAGATTACTGGATGGAAACTGAATCAAAGAGCAAAACCAATCATAATTGATCCAGGCCTGTACTTATCAAAAAAATCTGACCTTGCATGGACCACTCAGCGCCGATCACTTCCTACATCATTCAAGTTGTTTACAGGTTCAGCTTGGGTAATGCTATCGCGATCATTTCTTGAATATTGTATATGGGGCTGGGATAACCTACCACGTACTATCCTTATGTATTACACCAATTTTGTTTCTTCTCCAGAAGGCTATTTTCATACTATTATTTGCAACAACGAGGAATTTCGCCACACTGCAGTAAGCCATGATCTCCATTACATTGCTTGGGACAGCCCTCCAAAGCAGCACCCCATCTCGTTGTCTATGAAGGACTTTGACAAAATGGTAAAGAGCAATGCTCCATTTGCTCGAAAATTTGCAAGGGATGACCCTGTCTTGGACAAAATTGATAAAGAACTTCTCGGTCGAAAAAGCCGGTTTGCGCCTGGGGCTTGGTGTATAGGCAACCCAGAAGGTGGGGCTGACCCATGCTCAGTGCGTGGTAATGATTCAGTGTTTAGGCCAGGTCCTGGTGCTGTGAGGTTCCAAGAGCTGCTTCAGACACTGTTGTCTGAAGATTTCCAGAAAAAGCAATGTACATGA

Protein Analysis

436

Amino Acids

49.54

Weight (kDa)

7.66

Isoelectric Point (pI)

39.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 566
AasI GACNNNNNNGTC 1 cut(s) 1273
AccB1I GGYRCC 1 cut(s) 262
AccB7I CCANNNNNTGG 3 cut(s) 143, 1181, 1235
AccII CGCG 2 cut(s) 332, 823
AciI CCGC 2 cut(s) 332, 383
AclWI GGATC 3 cut(s) 378, 419, 707
AcsI RAATTY 2 cut(s) 947, 1079
AcuI CTGAAG 2 cut(s) 1247, 1299
AdeI CACNNNGTG 1 cut(s) 143
AfaI GTAC 5 cut(s) 292, 511, 725, 871, 1303
AfiI CCNNNNNNNGG 5 cut(s) 143, 367, 1102, 1181, 1235
AgsI TTSAA 5 cut(s) 212, 223, 656, 787, 836
AjnI CCWGG 4 cut(s) 715, 1150, 1228, 1234
AjuI GAANNNNNNNTTGG 4 cut(s) 215, 247, 1245, 1277
AluBI AGCT 4 cut(s) 81, 546, 806, 1258
AluI AGCT 4 cut(s) 81, 546, 806, 1258
Alw21I GWGCWC 1 cut(s) 548
AlwI GGATC 3 cut(s) 378, 419, 707
AlwNI CAGNNNCTG 2 cut(s) 1235, 1270
Ama87I CYCGRG 1 cut(s) 109
AoxI GGCC 3 cut(s) 490, 718, 1226
ApaI GGGCCC 1 cut(s) 494
ApeKI GCWGC 2 cut(s) 1009, 1258
ApoI RAATTY 2 cut(s) 947, 1079
AspLEI GCGC 3 cut(s) 332, 765, 1150
AspS9I GGNCC 4 cut(s) 490, 491, 753, 1232
AsuHPI GGTGA 3 cut(s) 59, 311, 490
AsuNHI GCTAGC 1 cut(s) 77
AvaI CYCGRG 1 cut(s) 109
AvaII GGWCC 2 cut(s) 753, 1232
BaeGI GKGCMC 2 cut(s) 265, 494
BanI GGYRCC 1 cut(s) 262
BanII GRGCYC 2 cut(s) 494, 548
BauI CACGAG 1 cut(s) 387
Bbv12I GWGCWC 1 cut(s) 548
BbvI GCAGC 2 cut(s) 1021, 1245
BccI CCATC 2 cut(s) 669, 1025
BciT130I CCWGG 4 cut(s) 717, 1152, 1230, 1236
BclI TGATCA 1 cut(s) 84
BfaI CTAG 3 cut(s) 78, 267, 636
BfmI CTRYAG 1 cut(s) 960
BfoI RGCGCY 1 cut(s) 766
BisI GCNGC 2 cut(s) 1010, 1259
BlsI GCNGC 2 cut(s) 1011, 1260
Bme1390I CCNGG 4 cut(s) 717, 1152, 1230, 1236
Bme18I GGWCC 2 cut(s) 753, 1232
BmeT110I CYCGRG 1 cut(s) 109
BmgT120I GGNCC 4 cut(s) 490, 491, 753, 1232
BmiI GGNNCC 4 cut(s) 264, 381, 492, 1250
BmrFI CCNGG 4 cut(s) 717, 1152, 1230, 1236
BmtI GCTAGC 1 cut(s) 81
BplI GAGNNNNNCTC 2 cut(s) 1048, 1080
BpmI CTGGAG 1 cut(s) 891
BpuEI CTTGAG 1 cut(s) 395
BsaAI YACGTR 1 cut(s) 869
BsaJI CCNNGG 1 cut(s) 1151
BsaXI ACNNNNNCTCC 2 cut(s) 155, 185
Bsc4I CCNNNNNNNGG 5 cut(s) 143, 367, 1102, 1181, 1235
Bse118I RCCGGY 1 cut(s) 1140
Bse1I ACTGG 2 cut(s) 563, 676
Bse3DI GCAATG 3 cut(s) 984, 1066, 1304
BseBI CCWGG 4 cut(s) 717, 1152, 1230, 1236
BseDI CCNNGG 1 cut(s) 1151
BseGI GGATG 5 cut(s) 193, 318, 340, 680, 1096
BseLI CCNNNNNNNGG 5 cut(s) 143, 367, 1102, 1181, 1235
BseMI GCAATG 3 cut(s) 984, 1066, 1304
BseMII CTCAG 5 cut(s) 45, 561, 586, 773, 1212
BseNI ACTGG 2 cut(s) 563, 676
BseSI GKGCMC 2 cut(s) 265, 494
BseXI GCAGC 2 cut(s) 1021, 1245
BseYI CCCAGC 1 cut(s) 852
Bsh1236I CGCG 2 cut(s) 332, 823
Bsh1285I CGRYCG 1 cut(s) 1132
BshFI GGCC 3 cut(s) 492, 720, 1228
BshNI GGYRCC 1 cut(s) 262
BsiEI CGRYCG 1 cut(s) 1132
BsiHKAI GWGCWC 1 cut(s) 548
BsiHKCI CYCGRG 1 cut(s) 109
BsiSI CCGG 1 cut(s) 1141
BslFI GGGAC 2 cut(s) 569, 1007
BslI CCNNNNNNNGG 5 cut(s) 143, 367, 1102, 1181, 1235
BsmFI GGGAC 2 cut(s) 569, 1007
BsnI GGCC 3 cut(s) 492, 720, 1228
BsoBI CYCGRG 1 cut(s) 109
Bsp120I GGGCCC 1 cut(s) 490
Bsp1286I GDGCHC 3 cut(s) 265, 494, 548
Bsp1407I TGTACA 1 cut(s) 1301
Bsp143I GATC 8 cut(s) 84, 227, 370, 424, 712, 767, 824, 973
Bsp68I TCGCGA 1 cut(s) 823
BspACI CCGC 2 cut(s) 332, 383
BspANI GGCC 3 cut(s) 492, 720, 1228
BspCNI CTCAG 5 cut(s) 44, 560, 585, 772, 1211
BspFNI CGCG 2 cut(s) 332, 823
BspHI TCATGA 1 cut(s) 594
BspLI GGNNCC 4 cut(s) 264, 381, 492, 1250
BspMAI CTGCAG 1 cut(s) 964
BspOI GCTAGC 1 cut(s) 81
BspPI GGATC 3 cut(s) 378, 419, 707
BspT107I GGYRCC 1 cut(s) 262
BsrDI GCAATG 3 cut(s) 984, 1066, 1304
BsrFI RCCGGY 1 cut(s) 1140
BsrGI TGTACA 1 cut(s) 1301
BsrI ACTGG 2 cut(s) 563, 676
BssAI RCCGGY 1 cut(s) 1140
BssECI CCNNGG 1 cut(s) 1151
BssMI GATC 8 cut(s) 84, 227, 370, 424, 712, 767, 824, 973
BssSI CACGAG 1 cut(s) 387
Bst2BI CACGAG 1 cut(s) 387
Bst2UI CCWGG 4 cut(s) 717, 1152, 1230, 1236
Bst4CI ACNGT 1 cut(s) 1272
BstAUI TGTACA 1 cut(s) 1301
BstBAI YACGTR 1 cut(s) 869
BstC8I GCNNGC 1 cut(s) 79
BstDEI CTNAG 5 cut(s) 31, 547, 572, 759, 1198
BstF5I GGATG 5 cut(s) 193, 318, 340, 680, 1096
BstFNI CGCG 2 cut(s) 332, 823
BstH2I RGCGCY 1 cut(s) 766
BstHHI GCGC 3 cut(s) 332, 765, 1150
BstKTI GATC 8 cut(s) 87, 230, 373, 427, 715, 770, 827, 976
BstMBI GATC 8 cut(s) 84, 227, 370, 424, 712, 767, 824, 973
BstMCI CGRYCG 1 cut(s) 1132
BstMWI GCNNNNNNNGC 2 cut(s) 1070, 1154
BstNI CCWGG 4 cut(s) 717, 1152, 1230, 1236
BstSCI CCNGG 4 cut(s) 715, 1150, 1228, 1234
BstSFI CTRYAG 1 cut(s) 960
BstSLI GKGCMC 2 cut(s) 265, 494
BstUI CGCG 2 cut(s) 332, 823
BstV1I GCAGC 2 cut(s) 1021, 1245
BstX2I RGATCY 1 cut(s) 370
BstYI RGATCY 1 cut(s) 370
BsuRI GGCC 3 cut(s) 492, 720, 1228
BtsCI GGATG 5 cut(s) 193, 318, 340, 680, 1096
BtsI GCAGTG 1 cut(s) 957
BtsIMutI CAGTG 6 cut(s) 420, 580, 957, 1206, 1224, 1268
BtuMI TCGCGA 1 cut(s) 823
Cac8I GCNNGC 1 cut(s) 79
CaiI CAGNNNCTG 2 cut(s) 1235, 1270
CciI TCATGA 1 cut(s) 594
CfoI GCGC 3 cut(s) 332, 765, 1150
Cfr10I RCCGGY 1 cut(s) 1140
Cfr13I GGNCC 4 cut(s) 490, 491, 753, 1232
CseI GACGC 1 cut(s) 567
Csp6I GTAC 5 cut(s) 291, 510, 724, 870, 1302
CviAII CATG 7 cut(s) 140, 595, 617, 750, 971, 1194, 1305
CviQI GTAC 5 cut(s) 291, 510, 724, 870, 1302
DdeI CTNAG 5 cut(s) 31, 547, 572, 759, 1198
DpnI GATC 8 cut(s) 86, 229, 372, 426, 714, 769, 826, 975
DpnII GATC 8 cut(s) 84, 227, 370, 424, 712, 767, 824, 973
DraIII CACNNNGTG 1 cut(s) 143
DrdI GACNNNNNNGTC 1 cut(s) 1273
DseDI GACNNNNNNGTC 1 cut(s) 1273
EciI GGCGGA 1 cut(s) 372
Ecl136II GAGCTC 1 cut(s) 546
Eco147I AGGCCT 1 cut(s) 720
Eco24I GRGCYC 2 cut(s) 494, 548
Eco47I GGWCC 2 cut(s) 753, 1232
Eco53kI GAGCTC 1 cut(s) 546
Eco57I CTGAAG 2 cut(s) 1247, 1299
Eco88I CYCGRG 1 cut(s) 109
EcoICRI GAGCTC 1 cut(s) 546
EcoO109I RGGNCCY 3 cut(s) 490, 491, 1232
EcoRII CCWGG 4 cut(s) 715, 1150, 1228, 1234
EcoT38I GRGCYC 2 cut(s) 494, 548
FaeI CATG 7 cut(s) 143, 598, 620, 753, 974, 1197, 1308
FalI AAGNNNNNCTT 2 cut(s) 1245, 1277
FaqI GGGAC 2 cut(s) 569, 1007
FatI CATG 7 cut(s) 139, 594, 616, 749, 970, 1193, 1304
FbaI TGATCA 1 cut(s) 84
Fnu4HI GCNGC 2 cut(s) 1010, 1259
FokI GGATG 5 cut(s) 200, 325, 327, 687, 1103
FriOI GRGCYC 2 cut(s) 494, 548
Fsp4HI GCNGC 2 cut(s) 1010, 1259
FspBI CTAG 3 cut(s) 78, 267, 636
GlaI GCGC 3 cut(s) 331, 764, 1149
GluI GCNGC 2 cut(s) 1010, 1259
GsaI CCCAGC 1 cut(s) 856
GsuI CTGGAG 1 cut(s) 891
HaeII RGCGCY 1 cut(s) 766
HaeIII GGCC 3 cut(s) 492, 720, 1228
HapII CCGG 1 cut(s) 1141
HgaI GACGC 1 cut(s) 567
HhaI GCGC 3 cut(s) 332, 765, 1150
Hin1II CATG 7 cut(s) 143, 598, 620, 753, 974, 1197, 1308
Hin6I GCGC 3 cut(s) 330, 763, 1148
HinP1I GCGC 3 cut(s) 330, 763, 1148
HinfI GANTC 5 cut(s) 22, 191, 212, 685, 1214
HpaII CCGG 1 cut(s) 1141
HphI GGTGA 3 cut(s) 59, 311, 490
Hpy166II GTNNAC 2 cut(s) 129, 795
Hpy188I TCNGA 8 cut(s) 187, 217, 253, 550, 583, 742, 1266, 1279
Hpy188III TCNNGA 8 cut(s) 374, 389, 595, 636, 822, 833, 908, 1288
Hpy8I GTNNAC 2 cut(s) 129, 795
HpyAV CCTTC 5 cut(s) 184, 412, 905, 1027, 1172
HpyCH4III ACNGT 1 cut(s) 1272
HpyCH4IV ACGT 2 cut(s) 482, 868
HpyCH4V TGCA 5 cut(s) 664, 749, 936, 962, 1085
HpyF10VI GCNNNNNNNGC 2 cut(s) 1070, 1154
HpyF3I CTNAG 5 cut(s) 31, 547, 572, 759, 1198
HpySE526I ACGT 2 cut(s) 482, 868
Hsp92II CATG 7 cut(s) 143, 598, 620, 753, 974, 1197, 1308
HspAI GCGC 3 cut(s) 330, 763, 1148
Ksp22I TGATCA 1 cut(s) 84
Kzo9I GATC 8 cut(s) 84, 227, 370, 424, 712, 767, 824, 973
LmnI GCTCC 2 cut(s) 385, 1069
Lsp1109I GCAGC 2 cut(s) 1021, 1245
MaeI CTAG 3 cut(s) 78, 267, 636
MaeII ACGT 2 cut(s) 482, 868
MaeIII GTNAC 1 cut(s) 478
MalI GATC 8 cut(s) 86, 229, 372, 426, 714, 769, 826, 975
MboI GATC 8 cut(s) 84, 227, 370, 424, 712, 767, 824, 973
MboII GAAGA 2 cut(s) 894, 1292
MflI RGATCY 1 cut(s) 370
MhlI GDGCHC 3 cut(s) 265, 494, 548
MluCI AATT 8 cut(s) 255, 401, 472, 708, 892, 947, 1079, 1110
MlyI GAGTC 1 cut(s) 185
MmeI TCCRAC 1 cut(s) 378
MseI TTAA 2 cut(s) 326, 536
MspI CCGG 1 cut(s) 1141
MspR9I CCNGG 4 cut(s) 717, 1152, 1230, 1236
MvaI CCWGG 4 cut(s) 717, 1152, 1230, 1236
MvnI CGCG 2 cut(s) 332, 823
MwoI GCNNNNNNNGC 2 cut(s) 1070, 1154
NdeII GATC 8 cut(s) 84, 227, 370, 424, 712, 767, 824, 973
NheI GCTAGC 1 cut(s) 77
NlaIII CATG 7 cut(s) 143, 598, 620, 753, 974, 1197, 1308
NlaIV GGNNCC 4 cut(s) 264, 381, 492, 1250
NmuCI GTSAC 1 cut(s) 478
NruI TCGCGA 1 cut(s) 823
PagI TCATGA 1 cut(s) 594
PceI AGGCCT 1 cut(s) 720
PfeI GAWTC 4 cut(s) 22, 212, 685, 1214
PflFI GACNNNGTC 1 cut(s) 1097
PflMI CCANNNNNTGG 3 cut(s) 143, 1181, 1235
PkrI GCNGC 2 cut(s) 1011, 1260
PleI GAGTC 1 cut(s) 185
PpsI GAGTC 1 cut(s) 185
Ppu21I YACGTR 1 cut(s) 869
PpuMI RGGWCCY 1 cut(s) 1232
PsiI TTATAA 1 cut(s) 566
Psp124BI GAGCTC 1 cut(s) 548
Psp5II RGGWCCY 1 cut(s) 1232
Psp6I CCWGG 4 cut(s) 715, 1150, 1228, 1234
PspFI CCCAGC 1 cut(s) 852
PspGI CCWGG 4 cut(s) 715, 1150, 1228, 1234
PspN4I GGNNCC 4 cut(s) 264, 381, 492, 1250
PspOMI GGGCCC 1 cut(s) 490
PspPI GGNCC 4 cut(s) 490, 491, 753, 1232
PspPPI RGGWCCY 1 cut(s) 1232
PstI CTGCAG 1 cut(s) 964
PstNI CAGNNNCTG 2 cut(s) 1235, 1270
PsuI RGATCY 1 cut(s) 370
PsyI GACNNNGTC 1 cut(s) 1097
RruI TCGCGA 1 cut(s) 823
RsaI GTAC 5 cut(s) 292, 511, 725, 871, 1303
RsaNI GTAC 5 cut(s) 291, 510, 724, 870, 1302
SacI GAGCTC 1 cut(s) 548
SaqAI TTAA 2 cut(s) 326, 536
SatI GCNGC 2 cut(s) 1010, 1259
Sau3AI GATC 8 cut(s) 84, 227, 370, 424, 712, 767, 824, 973
Sau96I GGNCC 4 cut(s) 490, 491, 753, 1232
SchI GAGTC 1 cut(s) 185
ScrFI CCNGG 4 cut(s) 717, 1152, 1230, 1236
SduI GDGCHC 3 cut(s) 265, 494, 548
SfcI CTRYAG 1 cut(s) 960
SinI GGWCC 2 cut(s) 753, 1232
SmlI CTYRAG 1 cut(s) 374
SmoI CTYRAG 1 cut(s) 374
Sse9I AATT 8 cut(s) 255, 401, 472, 708, 892, 947, 1079, 1110
SseBI AGGCCT 1 cut(s) 720
SsiI CCGC 2 cut(s) 332, 383
SspI AATATT 1 cut(s) 839
SspMI CTAG 3 cut(s) 78, 267, 636
SstI GAGCTC 1 cut(s) 548
StuI AGGCCT 1 cut(s) 720
StyD4I CCNGG 4 cut(s) 715, 1150, 1228, 1234
TaaI ACNGT 1 cut(s) 1272
TaiI ACGT 2 cut(s) 485, 871
TaqI TCGA 2 cut(s) 1075, 1132
TaqII GACCGA 1 cut(s) 1118
TasI AATT 8 cut(s) 255, 401, 472, 708, 892, 947, 1079, 1110
TatI WGTACW 2 cut(s) 723, 1301
TfiI GAWTC 4 cut(s) 22, 212, 685, 1214
Tru1I TTAA 2 cut(s) 326, 536
Tru9I TTAA 2 cut(s) 326, 536
TscAI CASTG 6 cut(s) 420, 580, 964, 1206, 1224, 1275
TseFI GTSAC 1 cut(s) 478
TseI GCWGC 2 cut(s) 1009, 1258
Tsp45I GTSAC 1 cut(s) 478
TspDTI ATGAA 5 cut(s) 35, 82, 605, 911, 1046
TspRI CASTG 6 cut(s) 420, 580, 964, 1206, 1224, 1275
Tth111I GACNNNGTC 1 cut(s) 1097
Van91I CCANNNNNTGG 3 cut(s) 143, 1181, 1235
VpaK11BI GGWCC 2 cut(s) 753, 1232
XapI RAATTY 2 cut(s) 947, 1079
XbaI TCTAGA 1 cut(s) 635
XspI CTAG 3 cut(s) 78, 267, 636
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.