pycom17g08040

Xylosyltransferase 1-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Forward (+)
6032555 .. 6035479
2925 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom17g08040.4

Sequence Viewer

Length: 1302 bp
ATGAGGAAGTATGTGAATCATCACTCAGCAAGGGTGATTGGTGATAGGAATTGGGTTATTCCATTCATTACTAGCTTTATCATATTCATTACCCTCTATTTCTCTGCCATTTCCGGGCTCTTTACCTCCCCACACGATGGAGAGAATTTGTCATTCGACATTATTCCCTTCGCAAAATCAGATGACACAAGTGAGTATTATGTCGAATCTGATTTGAAAACATCATTGGACACCAATGGGAGTTCCAAAATTGGGGCACCTAGATTTGCGTATCTTATATCCGGCACAAGGGGTGATAGTCATAGGATGATGAGGACTTTAAGGGCGGTGTATCATCCAAGAAATCAATATATCCTGCATTTGGATCTTGAGGCTCCGCCTCGTGAAAGGTTGGAATTGGCAAGTTTAGTGCGGGCTGATCTTACTTTTCGCGACGTGGAGAATGTGCGTGTTATGTCTCAATCCAATTTGGTGACTTATAAGGGCCCTACGATGATTGCTTGTACTCTGCAAGCCATTTCCATTCTATTAAAGGAGAGCTCAGAGTGGGACTGGTTTATAAACCTCAGTGCATCAGATTATCCTCTCATGACACAAGATGATTTGCTTCATGCTTTCTCCAATCTTTCCAGAAATATCAACTTTATTGAACATATGCAGATCACTGGATGGAAACTGAACCAAAGAGCAAAACCAATCATAATTGATCCAGGCCTGTACTTATCAAAAAAATCTGACCTTGCACTAACTACTCAGCGCCGATCCCTTCCTACATCATTCAAGTTGTTTACAGGTTCAGCGTGGGTAATGCTAACGCGATCATTTCTTGAGTATTGTATATGGGGATGGGATAACCTCCCACGCACGATCCTTATGTACTACACAAATTTTGTTTCTTCTCCGGAAGGCTATTTTCATACTGTTATTTGCAACAACGAGGAATATCGCCACACTGCAATAAGTCACGATCTCCACTACATTGCTTGGGACAGACCACCTAAGCAGCATCCCATCTCTTTATCAATGAAGGACTTTGACAAAATGGTAAAGAGCAATGCTCCCTTTGCTCGAAAGTTTGCAAAGGATGACCCAGTGTTAGACAAAATTGATAAAGAGCTTCTAGGTCGCACAAGCCGGTTTGCGCCTGGGGGGTGGTGCATAGGCAGCCCTGAAGGCGGGGCTGACCCATGCTCGGTGCGTGGTAATGATTCAGTGTTTAAGCCAGGTCCTGGTTCAGAGAGGTTCCAAGAGCTGCTTCACACACTAATATCCGAAGATTTTCGAAGAAAGCAATGTACATGA

Protein Analysis

434

Amino Acids

49.62

Weight (kDa)

8.12

Isoelectric Point (pI)

35.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 480, 560
AccB1I GGYRCC 1 cut(s) 256
AccB7I CCANNNNNTGG 2 cut(s) 137, 1229
AccII CGCG 2 cut(s) 432, 817
AccIII TCCGGA 1 cut(s) 901
AciI CCGC 4 cut(s) 326, 377, 412, 1176
AclWI GGATC 4 cut(s) 372, 701, 756, 862
AcsI RAATTY 2 cut(s) 145, 886
AcuI CTGAAG 1 cut(s) 1191
AfaI GTAC 4 cut(s) 505, 719, 878, 1297
AfiI CCNNNNNNNGG 8 cut(s) 114, 137, 252, 288, 361, 1175, 1192, 1229
AgsI TTSAA 3 cut(s) 217, 650, 781
AjiI CACGTC 1 cut(s) 436
AjnI CCWGG 4 cut(s) 709, 1144, 1222, 1228
AjuI GAANNNNNNNTTGG 4 cut(s) 209, 241, 1239, 1271
AluBI AGCT 4 cut(s) 75, 540, 1117, 1252
AluI AGCT 4 cut(s) 75, 540, 1117, 1252
Alw21I GWGCWC 1 cut(s) 542
Alw26I GTCTC 1 cut(s) 462
AlwI GGATC 4 cut(s) 372, 701, 756, 862
AlwNI CAGNNNCTG 1 cut(s) 1229
Aor13HI TCCGGA 1 cut(s) 901
AoxI GGCC 2 cut(s) 484, 712
ApaI GGGCCC 1 cut(s) 488
ApeKI GCWGC 3 cut(s) 1003, 1164, 1252
ApoI RAATTY 2 cut(s) 145, 886
Asp700I GAANNNNTTC 1 cut(s) 1278
AspLEI GCGC 2 cut(s) 759, 1144
AspS9I GGNCC 3 cut(s) 484, 485, 1226
AsuC2I CCSGG 1 cut(s) 115
AsuHPI GGTGA 4 cut(s) 46, 53, 305, 484
AsuII TTCGAA 1 cut(s) 1282
AvaII GGWCC 1 cut(s) 1226
BaeGI GKGCMC 2 cut(s) 259, 488
BanI GGYRCC 1 cut(s) 256
BanII GRGCYC 3 cut(s) 120, 488, 542
BauI CACGAG 1 cut(s) 381
Bbv12I GWGCWC 1 cut(s) 542
BbvI GCAGC 3 cut(s) 1015, 1176, 1239
BccI CCATC 4 cut(s) 131, 663, 840, 1019
BciT130I CCWGG 4 cut(s) 711, 1146, 1224, 1230
BcnI CCSGG 1 cut(s) 115
BcoDI GTCTC 1 cut(s) 462
BfaI CTAG 3 cut(s) 72, 261, 1121
BfoI RGCGCY 1 cut(s) 760
BglI GCCNNNNNGGC 1 cut(s) 1173
BisI GCNGC 3 cut(s) 1004, 1165, 1253
BlsI GCNGC 3 cut(s) 1005, 1166, 1254
Bme1390I CCNGG 5 cut(s) 115, 711, 1146, 1224, 1230
Bme18I GGWCC 1 cut(s) 1226
BmgBI CACGTC 1 cut(s) 436
BmgT120I GGNCC 3 cut(s) 484, 485, 1226
BmiI GGNNCC 4 cut(s) 258, 375, 486, 1244
BmrFI CCNGG 5 cut(s) 115, 711, 1146, 1224, 1230
BmrI ACTGGG 1 cut(s) 1085
BmsI GCATC 2 cut(s) 581, 1015
BmuI ACTGGG 1 cut(s) 1085
BplI GAGNNNNNCTC 2 cut(s) 1042, 1074
Bpu10I CCTNAGC 1 cut(s) 999
Bpu14I TTCGAA 1 cut(s) 1282
BpuEI CTTGAG 2 cut(s) 389, 848
BpuMI CCSGG 1 cut(s) 115
BsaJI CCNNGG 1 cut(s) 1145
BsaWI WCCGGW 1 cut(s) 901
Bsc4I CCNNNNNNNGG 8 cut(s) 114, 137, 252, 288, 361, 1175, 1192, 1229
Bse118I RCCGGY 1 cut(s) 1134
Bse1I ACTGG 3 cut(s) 557, 670, 1091
Bse3DI GCAATG 3 cut(s) 978, 1060, 1298
BseAI TCCGGA 1 cut(s) 901
BseBI CCWGG 4 cut(s) 711, 1146, 1224, 1230
BseDI CCNNGG 1 cut(s) 1145
BseGI GGATG 6 cut(s) 312, 334, 674, 851, 1006, 1090
BseLI CCNNNNNNNGG 8 cut(s) 114, 137, 252, 288, 361, 1175, 1192, 1229
BseMI GCAATG 3 cut(s) 978, 1060, 1298
BseMII CTCAG 4 cut(s) 39, 555, 580, 767
BseNI ACTGG 3 cut(s) 557, 670, 1091
BseSI GKGCMC 2 cut(s) 259, 488
BseXI GCAGC 3 cut(s) 1015, 1176, 1239
Bsh1236I CGCG 2 cut(s) 432, 817
BshFI GGCC 2 cut(s) 486, 714
BshNI GGYRCC 1 cut(s) 256
BsiHKAI GWGCWC 1 cut(s) 542
BsiSI CCGG 4 cut(s) 114, 282, 902, 1135
BslFI GGGAC 2 cut(s) 563, 1001
BslI CCNNNNNNNGG 8 cut(s) 114, 137, 252, 288, 361, 1175, 1192, 1229
BsmAI GTCTC 1 cut(s) 462
BsmFI GGGAC 2 cut(s) 563, 1001
BsnI GGCC 2 cut(s) 486, 714
Bsp119I TTCGAA 1 cut(s) 1282
Bsp120I GGGCCC 1 cut(s) 484
Bsp1286I GDGCHC 4 cut(s) 120, 259, 488, 542
Bsp13I TCCGGA 1 cut(s) 901
Bsp1407I TGTACA 1 cut(s) 1295
Bsp143I GATC 8 cut(s) 364, 418, 660, 706, 761, 818, 867, 967
Bsp68I TCGCGA 1 cut(s) 432
BspACI CCGC 4 cut(s) 326, 377, 412, 1176
BspANI GGCC 2 cut(s) 486, 714
BspCNI CTCAG 4 cut(s) 38, 554, 579, 766
BspEI TCCGGA 1 cut(s) 901
BspFNI CGCG 2 cut(s) 432, 817
BspHI TCATGA 1 cut(s) 588
BspLI GGNNCC 4 cut(s) 258, 375, 486, 1244
BspPI GGATC 4 cut(s) 372, 701, 756, 862
BspT104I TTCGAA 1 cut(s) 1282
BspT107I GGYRCC 1 cut(s) 256
BsrDI GCAATG 3 cut(s) 978, 1060, 1298
BsrFI RCCGGY 1 cut(s) 1134
BsrGI TGTACA 1 cut(s) 1295
BsrI ACTGG 3 cut(s) 557, 670, 1091
BssAI RCCGGY 1 cut(s) 1134
BssECI CCNNGG 1 cut(s) 1145
BssMI GATC 8 cut(s) 364, 418, 660, 706, 761, 818, 867, 967
BssSI CACGAG 1 cut(s) 381
Bst2BI CACGAG 1 cut(s) 381
Bst2UI CCWGG 4 cut(s) 711, 1146, 1224, 1230
Bst4CI ACNGT 1 cut(s) 922
BstAUI TGTACA 1 cut(s) 1295
BstBI TTCGAA 1 cut(s) 1282
BstC8I GCNNGC 2 cut(s) 414, 513
BstDEI CTNAG 5 cut(s) 25, 541, 566, 753, 999
BstF5I GGATG 6 cut(s) 312, 334, 674, 851, 1006, 1090
BstFNI CGCG 2 cut(s) 432, 817
BstH2I RGCGCY 1 cut(s) 760
BstHHI GCGC 2 cut(s) 759, 1144
BstKTI GATC 8 cut(s) 367, 421, 663, 709, 764, 821, 870, 970
BstMAI GTCTC 1 cut(s) 462
BstMBI GATC 8 cut(s) 364, 418, 660, 706, 761, 818, 867, 967
BstMWI GCNNNNNNNGC 3 cut(s) 1064, 1164, 1173
BstNI CCWGG 4 cut(s) 711, 1146, 1224, 1230
BstSCI CCNGG 5 cut(s) 113, 709, 1144, 1222, 1228
BstSLI GKGCMC 2 cut(s) 259, 488
BstUI CGCG 2 cut(s) 432, 817
BstV1I GCAGC 3 cut(s) 1015, 1176, 1239
BstX2I RGATCY 1 cut(s) 364
BstYI RGATCY 1 cut(s) 364
BsuRI GGCC 2 cut(s) 486, 714
BtrI CACGTC 1 cut(s) 436
BtsCI GGATG 6 cut(s) 312, 334, 674, 851, 1006, 1090
BtsI GCAGTG 1 cut(s) 951
BtsIMutI CAGTG 5 cut(s) 574, 663, 951, 1098, 1218
BtuMI TCGCGA 1 cut(s) 432
Cac8I GCNNGC 2 cut(s) 414, 513
CaiI CAGNNNCTG 1 cut(s) 1229
CciI TCATGA 1 cut(s) 588
CfoI GCGC 2 cut(s) 759, 1144
Cfr10I RCCGGY 1 cut(s) 1134
Cfr13I GGNCC 3 cut(s) 484, 485, 1226
Csp6I GTAC 4 cut(s) 504, 718, 877, 1296
CviAII CATG 4 cut(s) 589, 611, 1188, 1299
CviQI GTAC 4 cut(s) 504, 718, 877, 1296
DdeI CTNAG 5 cut(s) 25, 541, 566, 753, 999
DpnI GATC 8 cut(s) 366, 420, 662, 708, 763, 820, 869, 969
DpnII GATC 8 cut(s) 364, 418, 660, 706, 761, 818, 867, 967
EciI GGCGGA 1 cut(s) 366
Ecl136II GAGCTC 1 cut(s) 540
Eco147I AGGCCT 1 cut(s) 714
Eco24I GRGCYC 3 cut(s) 120, 488, 542
Eco47I GGWCC 1 cut(s) 1226
Eco53kI GAGCTC 1 cut(s) 540
Eco57I CTGAAG 1 cut(s) 1191
EcoICRI GAGCTC 1 cut(s) 540
EcoO109I RGGNCCY 3 cut(s) 484, 485, 1226
EcoRII CCWGG 4 cut(s) 709, 1144, 1222, 1228
EcoT38I GRGCYC 3 cut(s) 120, 488, 542
FaeI CATG 4 cut(s) 592, 614, 1191, 1302
FalI AAGNNNNNCTT 2 cut(s) 1239, 1271
FaqI GGGAC 2 cut(s) 563, 1001
FatI CATG 4 cut(s) 588, 610, 1187, 1298
FauI CCCGC 2 cut(s) 405, 1169
FauNDI CATATG 1 cut(s) 654
Fnu4HI GCNGC 3 cut(s) 1004, 1165, 1253
FokI GGATG 6 cut(s) 319, 321, 681, 858, 993, 1097
FriOI GRGCYC 3 cut(s) 120, 488, 542
Fsp4HI GCNGC 3 cut(s) 1004, 1165, 1253
FspBI CTAG 3 cut(s) 72, 261, 1121
GlaI GCGC 2 cut(s) 758, 1143
GluI GCNGC 3 cut(s) 1004, 1165, 1253
HaeII RGCGCY 1 cut(s) 760
HaeIII GGCC 2 cut(s) 486, 714
HapII CCGG 4 cut(s) 114, 282, 902, 1135
HhaI GCGC 2 cut(s) 759, 1144
Hin1II CATG 4 cut(s) 592, 614, 1191, 1302
Hin6I GCGC 2 cut(s) 757, 1142
HinP1I GCGC 2 cut(s) 757, 1142
HinfI GANTC 3 cut(s) 16, 206, 1208
HpaII CCGG 4 cut(s) 114, 282, 902, 1135
HphI GGTGA 4 cut(s) 46, 53, 305, 484
Hpy166II GTNNAC 1 cut(s) 789
Hpy188I TCNGA 7 cut(s) 181, 211, 544, 577, 736, 1237, 1273
Hpy188III TCNNGA 8 cut(s) 368, 383, 431, 589, 630, 827, 902, 965
Hpy8I GTNNAC 1 cut(s) 789
Hpy99I CGWCG 1 cut(s) 437
HpyAV CCTTC 5 cut(s) 178, 776, 899, 1021, 1166
HpyCH4III ACNGT 1 cut(s) 922
HpyCH4IV ACGT 1 cut(s) 435
HpyCH4V TGCA 9 cut(s) 358, 511, 572, 658, 743, 930, 956, 1079, 1158
HpyF10VI GCNNNNNNNGC 3 cut(s) 1064, 1164, 1173
HpyF3I CTNAG 5 cut(s) 25, 541, 566, 753, 999
HpySE526I ACGT 1 cut(s) 435
Hsp92II CATG 4 cut(s) 592, 614, 1191, 1302
HspAI GCGC 2 cut(s) 757, 1142
Kpn2I TCCGGA 1 cut(s) 901
Kzo9I GATC 8 cut(s) 364, 418, 660, 706, 761, 818, 867, 967
LmnI GCTCC 2 cut(s) 379, 1063
Lsp1109I GCAGC 3 cut(s) 1015, 1176, 1239
LweI GCATC 2 cut(s) 581, 1015
MaeI CTAG 3 cut(s) 72, 261, 1121
MaeII ACGT 1 cut(s) 435
MaeIII GTNAC 2 cut(s) 472, 962
MalI GATC 8 cut(s) 366, 420, 662, 708, 763, 820, 869, 969
MboI GATC 8 cut(s) 364, 418, 660, 706, 761, 818, 867, 967
MboII GAAGA 3 cut(s) 888, 1286, 1296
MflI RGATCY 1 cut(s) 364
MhlI GDGCHC 4 cut(s) 120, 259, 488, 542
MluCI AATT 8 cut(s) 49, 145, 249, 395, 466, 702, 886, 1104
MmeI TCCRAC 1 cut(s) 372
MroI TCCGGA 1 cut(s) 901
MroXI GAANNNNTTC 1 cut(s) 1278
MseI TTAA 3 cut(s) 320, 530, 1218
MspI CCGG 4 cut(s) 114, 282, 902, 1135
MspR9I CCNGG 5 cut(s) 115, 711, 1146, 1224, 1230
MvaI CCWGG 4 cut(s) 711, 1146, 1224, 1230
MvnI CGCG 2 cut(s) 432, 817
MwoI GCNNNNNNNGC 3 cut(s) 1064, 1164, 1173
NciI CCSGG 1 cut(s) 115
NdeI CATATG 1 cut(s) 654
NdeII GATC 8 cut(s) 364, 418, 660, 706, 761, 818, 867, 967
NlaIII CATG 4 cut(s) 592, 614, 1191, 1302
NlaIV GGNNCC 4 cut(s) 258, 375, 486, 1244
NmuCI GTSAC 2 cut(s) 472, 962
NruI TCGCGA 1 cut(s) 432
NspV TTCGAA 1 cut(s) 1282
PagI TCATGA 1 cut(s) 588
PceI AGGCCT 1 cut(s) 714
PdmI GAANNNNTTC 1 cut(s) 1278
PfeI GAWTC 3 cut(s) 16, 206, 1208
PflMI CCANNNNNTGG 2 cut(s) 137, 1229
PkrI GCNGC 3 cut(s) 1005, 1166, 1254
PpuMI RGGWCCY 1 cut(s) 1226
PsiI TTATAA 2 cut(s) 480, 560
Psp124BI GAGCTC 1 cut(s) 542
Psp5II RGGWCCY 1 cut(s) 1226
Psp6I CCWGG 4 cut(s) 709, 1144, 1222, 1228
PspGI CCWGG 4 cut(s) 709, 1144, 1222, 1228
PspN4I GGNNCC 4 cut(s) 258, 375, 486, 1244
PspOMI GGGCCC 1 cut(s) 484
PspPI GGNCC 3 cut(s) 484, 485, 1226
PspPPI RGGWCCY 1 cut(s) 1226
PstNI CAGNNNCTG 1 cut(s) 1229
PsuI RGATCY 1 cut(s) 364
RruI TCGCGA 1 cut(s) 432
RsaI GTAC 4 cut(s) 505, 719, 878, 1297
RsaNI GTAC 4 cut(s) 504, 718, 877, 1296
SacI GAGCTC 1 cut(s) 542
SaqAI TTAA 3 cut(s) 320, 530, 1218
SatI GCNGC 3 cut(s) 1004, 1165, 1253
Sau3AI GATC 8 cut(s) 364, 418, 660, 706, 761, 818, 867, 967
Sau96I GGNCC 3 cut(s) 484, 485, 1226
ScrFI CCNGG 5 cut(s) 115, 711, 1146, 1224, 1230
SduI GDGCHC 4 cut(s) 120, 259, 488, 542
SfaNI GCATC 2 cut(s) 581, 1015
SfuI TTCGAA 1 cut(s) 1282
SinI GGWCC 1 cut(s) 1226
SmlI CTYRAG 2 cut(s) 368, 827
SmoI CTYRAG 2 cut(s) 368, 827
Sse9I AATT 8 cut(s) 49, 145, 249, 395, 466, 702, 886, 1104
SseBI AGGCCT 1 cut(s) 714
SsiI CCGC 4 cut(s) 326, 377, 412, 1176
SspMI CTAG 3 cut(s) 72, 261, 1121
SstI GAGCTC 1 cut(s) 542
StuI AGGCCT 1 cut(s) 714
StyD4I CCNGG 5 cut(s) 113, 709, 1144, 1222, 1228
TaaI ACNGT 1 cut(s) 922
TaiI ACGT 1 cut(s) 438
TaqI TCGA 4 cut(s) 156, 204, 1069, 1282
TasI AATT 8 cut(s) 49, 145, 249, 395, 466, 702, 886, 1104
TatI WGTACW 4 cut(s) 503, 717, 876, 1295
TfiI GAWTC 3 cut(s) 16, 206, 1208
Tru1I TTAA 3 cut(s) 320, 530, 1218
Tru9I TTAA 3 cut(s) 320, 530, 1218
TscAI CASTG 5 cut(s) 574, 670, 958, 1098, 1218
TseFI GTSAC 2 cut(s) 472, 962
TseI GCWGC 3 cut(s) 1003, 1164, 1252
Tsp45I GTSAC 2 cut(s) 472, 962
TspDTI ATGAA 5 cut(s) 55, 76, 599, 905, 1040
TspRI CASTG 5 cut(s) 574, 670, 958, 1098, 1218
Van91I CCANNNNNTGG 2 cut(s) 137, 1229
VpaK11BI GGWCC 1 cut(s) 1226
XapI RAATTY 2 cut(s) 145, 886
XmnI GAANNNNTTC 1 cut(s) 1278
XspI CTAG 3 cut(s) 72, 261, 1121
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.