SPOC domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G12640 AT4G12640 AT4G12640 AT4G12640 |
| fragaria_vesca | FvH4_6g40190 FvH4_6g40190 |
| malus_domestica | MD09G1134400.v1.1 MD17G1123200.v1.1 MD17G1123300.v1.1 |
| prunus_persica | Prupe.3G192300_v2.0.a1 Prupe.3G192300_v2.0.a1 Prupe.3G192300_v2.0.a1 |
| pyrus_communis | pycom09g05560 pycom17g11470 |
| rosa_chinensis | RchiOBHm_Chr2g0155211 |
| rosa_laevigata | RLG00000020826 |
| rosa_multiflora | Rmu_co8185832.1_g000001 Rmu_sc0004976.1_g000040 |
| rosa_roxburghii | Rroxscaffold_2G00093870 |
| rosa_rugosa | Rorug02G0445900 Rorug02G0445900 |
| rosa_samantha | Rh2AG512300 Rh2BG523000 Rh2CG497300 Rh2DG532700 |
| rosa_wichuraiana | Rw2G042090 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 2298 |
| AccB1I | GGYRCC | 1 cut(s) | 1696 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 251 |
| AccBSI | CCGCTC | 1 cut(s) | 1213 |
| AccII | CGCG | 1 cut(s) | 67 |
| AciI | CCGC | 6 cut(s) | 284, 340, 1213, 1940, 2030, 2091 |
| AclI | AACGTT | 1 cut(s) | 1685 |
| AclWI | GGATC | 8 cut(s) | 275, 310, 760, 1056, 1095, 1964, 1977, 2026 |
| AcoI | YGGCCR | 1 cut(s) | 2027 |
| AcsI | RAATTY | 1 cut(s) | 801 |
| AcuI | CTGAAG | 4 cut(s) | 605, 741, 755, 876 |
| AcyI | GRCGYC | 1 cut(s) | 1162 |
| AfaI | GTAC | 6 cut(s) | 456, 985, 1370, 1725, 2226, 2346 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 251, 813, 911, 1173, 1895 |
| AflII | CTTAAG | 1 cut(s) | 130 |
| AgeI | ACCGGT | 1 cut(s) | 2007 |
| AjnI | CCWGG | 9 cut(s) | 166, 553, 970, 1074, 1126, 1269, 1588, 1735, 2101 |
| Alw26I | GTCTC | 1 cut(s) | 876 |
| AlwI | GGATC | 8 cut(s) | 275, 310, 760, 1056, 1095, 1964, 1977, 2026 |
| Ama87I | CYCGRG | 1 cut(s) | 645 |
| AoxI | GGCC | 3 cut(s) | 1799, 2027, 2266 |
| ApoI | RAATTY | 1 cut(s) | 801 |
| AsiGI | ACCGGT | 1 cut(s) | 2007 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 618 |
| AspLEI | GCGC | 2 cut(s) | 499, 2299 |
| AspS9I | GGNCC | 4 cut(s) | 701, 902, 1799, 1916 |
| AsuC2I | CCSGG | 1 cut(s) | 1914 |
| AsuHPI | GGTGA | 5 cut(s) | 152, 1829, 1865, 1997, 2049 |
| AsuNHI | GCTAGC | 1 cut(s) | 2425 |
| AvaI | CYCGRG | 1 cut(s) | 645 |
| AvaII | GGWCC | 3 cut(s) | 701, 902, 1916 |
| AxyI | CCTNAGG | 1 cut(s) | 942 |
| BamHI | GGATCC | 1 cut(s) | 1969 |
| BanI | GGYRCC | 1 cut(s) | 1696 |
| BanII | GRGCYC | 1 cut(s) | 401 |
| BauI | CACGAG | 1 cut(s) | 2034 |
| BbsI | GAAGAC | 4 cut(s) | 45, 611, 1100, 2399 |
| BccI | CCATC | 6 cut(s) | 586, 890, 1351, 1399, 1474, 1711 |
| BceAI | ACGGC | 2 cut(s) | 1246, 1530 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 191, 225, 339, 373, 1440, 1474 |
| BciT130I | CCWGG | 9 cut(s) | 168, 555, 972, 1076, 1128, 1271, 1590, 1737, 2103 |
| BciVI | GTATCC | 1 cut(s) | 93 |
| BclI | TGATCA | 1 cut(s) | 1993 |
| BcnI | CCSGG | 1 cut(s) | 1914 |
| BcoDI | GTCTC | 1 cut(s) | 876 |
| BfaI | CTAG | 4 cut(s) | 9, 1505, 1875, 2426 |
| BfmI | CTRYAG | 1 cut(s) | 345 |
| BfrI | CTTAAG | 1 cut(s) | 130 |
| BfuI | GTATCC | 1 cut(s) | 93 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1117 |
| BglII | AGATCT | 3 cut(s) | 734, 923, 2122 |
| BlpI | GCTNAGC | 2 cut(s) | 154, 1542 |
| BmcAI | AGTACT | 1 cut(s) | 1725 |
| Bme18I | GGWCC | 3 cut(s) | 701, 902, 1916 |
| BmeT110I | CYCGRG | 1 cut(s) | 645 |
| BmgT120I | GGNCC | 4 cut(s) | 701, 902, 1799, 1916 |
| BmiI | GGNNCC | 6 cut(s) | 702, 819, 1698, 1792, 1917, 1971 |
| BmrI | ACTGGG | 4 cut(s) | 441, 758, 801, 1420 |
| BmtI | GCTAGC | 1 cut(s) | 2429 |
| BmuI | ACTGGG | 4 cut(s) | 441, 758, 801, 1420 |
| BpiI | GAAGAC | 4 cut(s) | 45, 611, 1100, 2399 |
| BpmI | CTGGAG | 5 cut(s) | 364, 1658, 1776, 2136, 2426 |
| Bpu10I | CCTNAGC | 2 cut(s) | 279, 1428 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 154, 1542 |
| BpuEI | CTTGAG | 2 cut(s) | 523, 871 |
| BpuMI | CCSGG | 1 cut(s) | 1914 |
| BsaAI | YACGTR | 1 cut(s) | 1907 |
| BsaBI | GATNNNNATC | 1 cut(s) | 321 |
| BsaHI | GRCGYC | 1 cut(s) | 1162 |
| BsaJI | CCNNGG | 7 cut(s) | 553, 971, 1043, 1126, 1127, 1736, 2102 |
| BsaWI | WCCGGW | 2 cut(s) | 1793, 2007 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2134, 2164 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 251, 813, 911, 1173, 1895 |
| Bse118I | RCCGGY | 1 cut(s) | 2007 |
| Bse1I | ACTGG | 9 cut(s) | 304, 447, 753, 807, 1409, 1415, 1528, 2030, 2153 |
| Bse21I | CCTNAGG | 1 cut(s) | 942 |
| Bse8I | GATNNNNATC | 1 cut(s) | 321 |
| BseBI | CCWGG | 9 cut(s) | 168, 555, 972, 1076, 1128, 1271, 1590, 1737, 2103 |
| BseDI | CCNNGG | 7 cut(s) | 553, 971, 1043, 1126, 1127, 1736, 2102 |
| BseGI | GGATG | 3 cut(s) | 30, 214, 1678 |
| BseJI | GATNNNNATC | 1 cut(s) | 321 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 251, 813, 911, 1173, 1895 |
| BseMII | CTCAG | 4 cut(s) | 956, 1104, 1488, 2238 |
| BseNI | ACTGG | 9 cut(s) | 304, 447, 753, 807, 1409, 1415, 1528, 2030, 2153 |
| BseRI | GAGGAG | 1 cut(s) | 1655 |
| BseYI | CCCAGC | 1 cut(s) | 2158 |
| BsgI | GTGCAG | 1 cut(s) | 2418 |
| Bsh1236I | CGCG | 1 cut(s) | 67 |
| Bsh1285I | CGRYCG | 1 cut(s) | 124 |
| BshFI | GGCC | 3 cut(s) | 1801, 2029, 2268 |
| BshNI | GGYRCC | 1 cut(s) | 1696 |
| BshTI | ACCGGT | 1 cut(s) | 2007 |
| BsiEI | CGRYCG | 1 cut(s) | 124 |
| BsiHKCI | CYCGRG | 1 cut(s) | 645 |
| BsiSI | CCGG | 3 cut(s) | 1794, 1913, 2008 |
| BslFI | GGGAC | 5 cut(s) | 389, 1301, 1337, 1432, 2141 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 251, 813, 911, 1173, 1895 |
| BsmAI | GTCTC | 1 cut(s) | 876 |
| BsmFI | GGGAC | 5 cut(s) | 389, 1301, 1337, 1432, 2141 |
| BsmI | GAATGC | 1 cut(s) | 390 |
| BsnI | GGCC | 3 cut(s) | 1801, 2029, 2268 |
| BsoBI | CYCGRG | 1 cut(s) | 645 |
| Bsp1286I | GDGCHC | 1 cut(s) | 401 |
| Bsp1407I | TGTACA | 1 cut(s) | 2344 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 154, 1542 |
| Bsp19I | CCATGG | 1 cut(s) | 1043 |
| Bsp68I | TCGCGA | 1 cut(s) | 67 |
| BspACI | CCGC | 6 cut(s) | 284, 340, 1213, 1940, 2030, 2091 |
| BspANI | GGCC | 3 cut(s) | 1801, 2029, 2268 |
| BspCNI | CTCAG | 4 cut(s) | 955, 1105, 1489, 2239 |
| BspFNI | CGCG | 1 cut(s) | 67 |
| BspHI | TCATGA | 1 cut(s) | 2137 |
| BspLI | GGNNCC | 6 cut(s) | 702, 819, 1698, 1792, 1917, 1971 |
| BspMAI | CTGCAG | 1 cut(s) | 349 |
| BspOI | GCTAGC | 1 cut(s) | 2429 |
| BspPI | GGATC | 8 cut(s) | 275, 310, 760, 1056, 1095, 1964, 1977, 2026 |
| BspQI | GCTCTTC | 1 cut(s) | 1032 |
| BspT107I | GGYRCC | 1 cut(s) | 1696 |
| BspTI | CTTAAG | 1 cut(s) | 130 |
| BsrBI | CCGCTC | 1 cut(s) | 1213 |
| BsrFI | RCCGGY | 1 cut(s) | 2007 |
| BsrGI | TGTACA | 1 cut(s) | 2344 |
| BsrI | ACTGG | 9 cut(s) | 304, 447, 753, 807, 1409, 1415, 1528, 2030, 2153 |
| BssAI | RCCGGY | 1 cut(s) | 2007 |
| BssECI | CCNNGG | 7 cut(s) | 553, 971, 1043, 1126, 1127, 1736, 2102 |
| BssNI | GRCGYC | 1 cut(s) | 1162 |
| BssSI | CACGAG | 1 cut(s) | 2034 |
| BssT1I | CCWWGG | 1 cut(s) | 1043 |
| Bst2BI | CACGAG | 1 cut(s) | 2034 |
| Bst2UI | CCWGG | 9 cut(s) | 168, 555, 972, 1076, 1128, 1271, 1590, 1737, 2103 |
| Bst4CI | ACNGT | 5 cut(s) | 44, 63, 547, 1252, 2077 |
| Bst6I | CTCTTC | 2 cut(s) | 1032, 1311 |
| BstACI | GRCGYC | 1 cut(s) | 1162 |
| BstAFI | CTTAAG | 1 cut(s) | 130 |
| BstAUI | TGTACA | 1 cut(s) | 2344 |
| BstBAI | YACGTR | 1 cut(s) | 1907 |
| BstC8I | GCNNGC | 2 cut(s) | 1539, 2427 |
| BstDSI | CCRYGG | 1 cut(s) | 1043 |
| BstEII | GGTNACC | 1 cut(s) | 83 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1171 |
| BstF5I | GGATG | 3 cut(s) | 30, 214, 1678 |
| BstFNI | CGCG | 1 cut(s) | 67 |
| BstHHI | GCGC | 2 cut(s) | 499, 2299 |
| BstMAI | GTCTC | 1 cut(s) | 876 |
| BstMCI | CGRYCG | 1 cut(s) | 124 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 218, 605, 1117, 1129, 1543, 1880, 2179, 2296 |
| BstNI | CCWGG | 9 cut(s) | 168, 555, 972, 1076, 1128, 1271, 1590, 1737, 2103 |
| BstNSI | RCATGY | 2 cut(s) | 1537, 2297 |
| BstPI | GGTNACC | 1 cut(s) | 83 |
| BstSFI | CTRYAG | 1 cut(s) | 345 |
| BstUI | CGCG | 1 cut(s) | 67 |
| BstV2I | GAAGAC | 4 cut(s) | 45, 611, 1100, 2399 |
| BstX2I | RGATCY | 7 cut(s) | 734, 752, 923, 1048, 1100, 1969, 2122 |
| BstYI | RGATCY | 7 cut(s) | 734, 752, 923, 1048, 1100, 1969, 2122 |
| Bsu36I | CCTNAGG | 1 cut(s) | 942 |
| BsuI | GTATCC | 1 cut(s) | 93 |
| BsuRI | GGCC | 3 cut(s) | 1801, 2029, 2268 |
| BtgI | CCRYGG | 1 cut(s) | 1043 |
| BtgZI | GCGATG | 1 cut(s) | 909 |
| BtsCI | GGATG | 3 cut(s) | 30, 214, 1678 |
| BtsI | GCAGTG | 1 cut(s) | 697 |
| BtsIMutI | CAGTG | 4 cut(s) | 309, 454, 697, 814 |
| BtuMI | TCGCGA | 1 cut(s) | 67 |
| Cac8I | GCNNGC | 2 cut(s) | 1539, 2427 |
| CciI | TCATGA | 1 cut(s) | 2137 |
| CfoI | GCGC | 2 cut(s) | 499, 2299 |
| Cfr10I | RCCGGY | 1 cut(s) | 2007 |
| Cfr13I | GGNCC | 4 cut(s) | 701, 902, 1799, 1916 |
| CseI | GACGC | 2 cut(s) | 1170, 2393 |
| Csp6I | GTAC | 6 cut(s) | 455, 984, 1369, 1724, 2225, 2345 |
| CspAI | ACCGGT | 1 cut(s) | 2007 |
| CviQI | GTAC | 6 cut(s) | 455, 984, 1369, 1724, 2225, 2345 |
| EaeI | YGGCCR | 1 cut(s) | 2027 |
| Eam1104I | CTCTTC | 2 cut(s) | 1032, 1311 |
| EarI | CTCTTC | 2 cut(s) | 1032, 1311 |
| EciI | GGCGGA | 1 cut(s) | 299 |
| Eco130I | CCWWGG | 1 cut(s) | 1043 |
| Eco24I | GRGCYC | 1 cut(s) | 401 |
| Eco32I | GATATC | 1 cut(s) | 1606 |
| Eco47I | GGWCC | 3 cut(s) | 701, 902, 1916 |
| Eco57I | CTGAAG | 4 cut(s) | 605, 741, 755, 876 |
| Eco81I | CCTNAGG | 1 cut(s) | 942 |
| Eco88I | CYCGRG | 1 cut(s) | 645 |
| Eco91I | GGTNACC | 1 cut(s) | 83 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1171 |
| EcoO109I | RGGNCCY | 1 cut(s) | 902 |
| EcoO65I | GGTNACC | 1 cut(s) | 83 |
| EcoRI | GAATTC | 1 cut(s) | 801 |
| EcoRII | CCWGG | 9 cut(s) | 166, 553, 970, 1074, 1126, 1269, 1588, 1735, 2101 |
| EcoRV | GATATC | 1 cut(s) | 1606 |
| EcoT14I | CCWWGG | 1 cut(s) | 1043 |
| EcoT22I | ATGCAT | 4 cut(s) | 571, 954, 1207, 1632 |
| EcoT38I | GRGCYC | 1 cut(s) | 401 |
| ErhI | CCWWGG | 1 cut(s) | 1043 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 603, 635, 753, 785, 1283, 1315 |
| FaqI | GGGAC | 5 cut(s) | 389, 1301, 1337, 1432, 2141 |
| FauI | CCCGC | 2 cut(s) | 1933, 2084 |
| FauNDI | CATATG | 1 cut(s) | 910 |
| FbaI | TGATCA | 1 cut(s) | 1993 |
| FokI | GGATG | 3 cut(s) | 37, 221, 1685 |
| FriOI | GRGCYC | 1 cut(s) | 401 |
| FspBI | CTAG | 4 cut(s) | 9, 1505, 1875, 2426 |
| FspI | TGCGCA | 1 cut(s) | 2298 |
| GlaI | GCGC | 2 cut(s) | 498, 2298 |
| GsaI | CCCAGC | 1 cut(s) | 2162 |
| GsuI | CTGGAG | 5 cut(s) | 364, 1658, 1776, 2136, 2426 |
| HaeIII | GGCC | 3 cut(s) | 1801, 2029, 2268 |
| HapII | CCGG | 3 cut(s) | 1794, 1913, 2008 |
| HgaI | GACGC | 2 cut(s) | 1170, 2393 |
| HhaI | GCGC | 2 cut(s) | 499, 2299 |
| Hin1I | GRCGYC | 1 cut(s) | 1162 |
| Hin6I | GCGC | 2 cut(s) | 497, 2297 |
| HinP1I | GCGC | 2 cut(s) | 497, 2297 |
| HindIII | AAGCTT | 1 cut(s) | 151 |
| HinfI | GANTC | 9 cut(s) | 55, 227, 377, 851, 884, 1011, 1384, 2002, 2449 |
| HpaII | CCGG | 3 cut(s) | 1794, 1913, 2008 |
| HphI | GGTGA | 5 cut(s) | 152, 1829, 1865, 1997, 2049 |
| Hpy166II | GTNNAC | 3 cut(s) | 674, 1371, 2057 |
| Hpy188I | TCNGA | 9 cut(s) | 584, 591, 760, 856, 1030, 1708, 1717, 1870, 2023 |
| Hpy8I | GTNNAC | 3 cut(s) | 674, 1371, 2057 |
| Hpy99I | CGWCG | 3 cut(s) | 67, 709, 1982 |
| HpyCH4III | ACNGT | 5 cut(s) | 44, 63, 547, 1252, 2077 |
| HpyCH4IV | ACGT | 5 cut(s) | 510, 1685, 1768, 1906, 1977 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 218, 605, 1117, 1129, 1543, 1880, 2179, 2296 |
| HpySE526I | ACGT | 5 cut(s) | 510, 1685, 1768, 1906, 1977 |
| Hsp92I | GRCGYC | 1 cut(s) | 1162 |
| HspAI | GCGC | 2 cut(s) | 497, 2297 |
| Ksp22I | TGATCA | 1 cut(s) | 1993 |
| LguI | GCTCTTC | 1 cut(s) | 1032 |
| LmnI | GCTCC | 3 cut(s) | 1128, 1796, 1880 |
| MaeI | CTAG | 4 cut(s) | 9, 1505, 1875, 2426 |
| MaeII | ACGT | 5 cut(s) | 510, 1685, 1768, 1906, 1977 |
| MaeIII | GTNAC | 6 cut(s) | 83, 541, 860, 1946, 2003, 2323 |
| MbiI | CCGCTC | 1 cut(s) | 1213 |
| MfeI | CAATTG | 1 cut(s) | 2318 |
| MflI | RGATCY | 7 cut(s) | 734, 752, 923, 1048, 1100, 1969, 2122 |
| MhlI | GDGCHC | 1 cut(s) | 401 |
| MluCI | AATT | 7 cut(s) | 113, 143, 190, 578, 801, 1667, 2318 |
| MlyI | GAGTC | 4 cut(s) | 236, 371, 878, 2011 |
| MmeI | TCCRAC | 1 cut(s) | 1943 |
| Mph1103I | ATGCAT | 4 cut(s) | 571, 954, 1207, 1632 |
| MroXI | GAANNNNTTC | 1 cut(s) | 618 |
| MseI | TTAA | 8 cut(s) | 131, 189, 195, 870, 1265, 1322, 1728, 2470 |
| MspA1I | CMGCKG | 4 cut(s) | 340, 1658, 2091, 2432 |
| MspCI | CTTAAG | 1 cut(s) | 130 |
| MspI | CCGG | 3 cut(s) | 1794, 1913, 2008 |
| MunI | CAATTG | 1 cut(s) | 2318 |
| Mva1269I | GAATGC | 1 cut(s) | 390 |
| MvaI | CCWGG | 9 cut(s) | 168, 555, 972, 1076, 1128, 1271, 1590, 1737, 2103 |
| MvnI | CGCG | 1 cut(s) | 67 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 218, 605, 1117, 1129, 1543, 1880, 2179, 2296 |
| NciI | CCSGG | 1 cut(s) | 1914 |
| NcoI | CCATGG | 1 cut(s) | 1043 |
| NdeI | CATATG | 1 cut(s) | 910 |
| NheI | GCTAGC | 1 cut(s) | 2425 |
| NlaIV | GGNNCC | 6 cut(s) | 702, 819, 1698, 1792, 1917, 1971 |
| NmeAIII | GCCGAG | 1 cut(s) | 2294 |
| NmuCI | GTSAC | 3 cut(s) | 541, 1946, 2003 |
| NruI | TCGCGA | 1 cut(s) | 67 |
| NsbI | TGCGCA | 1 cut(s) | 2298 |
| NsiI | ATGCAT | 4 cut(s) | 571, 954, 1207, 1632 |
| NspI | RCATGY | 2 cut(s) | 1537, 2297 |
| PaeR7I | CTCGAG | 1 cut(s) | 645 |
| PagI | TCATGA | 1 cut(s) | 2137 |
| PasI | CCCWGGG | 1 cut(s) | 1127 |
| PciSI | GCTCTTC | 1 cut(s) | 1032 |
| PctI | GAATGC | 1 cut(s) | 390 |
| PdmI | GAANNNNTTC | 1 cut(s) | 618 |
| PfeI | GAWTC | 5 cut(s) | 55, 851, 1011, 1384, 2449 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 251 |
| PfoI | TCCNGGA | 1 cut(s) | 1588 |
| PinAI | ACCGGT | 1 cut(s) | 2007 |
| Ple19I | CGATCG | 1 cut(s) | 124 |
| PleI | GAGTC | 4 cut(s) | 235, 371, 878, 2010 |
| PpsI | GAGTC | 4 cut(s) | 235, 371, 878, 2010 |
| Ppu21I | YACGTR | 1 cut(s) | 1907 |
| PpuMI | RGGWCCY | 1 cut(s) | 902 |
| Psp1406I | AACGTT | 1 cut(s) | 1685 |
| Psp5II | RGGWCCY | 1 cut(s) | 902 |
| Psp6I | CCWGG | 9 cut(s) | 166, 553, 970, 1074, 1126, 1269, 1588, 1735, 2101 |
| PspEI | GGTNACC | 1 cut(s) | 83 |
| PspFI | CCCAGC | 1 cut(s) | 2158 |
| PspGI | CCWGG | 9 cut(s) | 166, 553, 970, 1074, 1126, 1269, 1588, 1735, 2101 |
| PspN4I | GGNNCC | 6 cut(s) | 702, 819, 1698, 1792, 1917, 1971 |
| PspPI | GGNCC | 4 cut(s) | 701, 902, 1799, 1916 |
| PspPPI | RGGWCCY | 1 cut(s) | 902 |
| PspXI | VCTCGAGB | 1 cut(s) | 645 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1716, 1748 |
| PstI | CTGCAG | 1 cut(s) | 349 |
| PsuI | RGATCY | 7 cut(s) | 734, 752, 923, 1048, 1100, 1969, 2122 |
| PvuI | CGATCG | 1 cut(s) | 124 |
| PvuII | CAGCTG | 2 cut(s) | 1658, 2432 |
| RruI | TCGCGA | 1 cut(s) | 67 |
| RsaI | GTAC | 6 cut(s) | 456, 985, 1370, 1725, 2226, 2346 |
| RsaNI | GTAC | 6 cut(s) | 455, 984, 1369, 1724, 2225, 2345 |
| SapI | GCTCTTC | 1 cut(s) | 1032 |
| SaqAI | TTAA | 8 cut(s) | 131, 189, 195, 870, 1265, 1322, 1728, 2470 |
| Sau96I | GGNCC | 4 cut(s) | 701, 902, 1799, 1916 |
| ScaI | AGTACT | 1 cut(s) | 1725 |
| SchI | GAGTC | 4 cut(s) | 236, 371, 878, 2011 |
| SduI | GDGCHC | 1 cut(s) | 401 |
| SfcI | CTRYAG | 1 cut(s) | 345 |
| Sfr274I | CTCGAG | 1 cut(s) | 645 |
| SinI | GGWCC | 3 cut(s) | 701, 902, 1916 |
| SlaI | CTCGAG | 1 cut(s) | 645 |
| SmlI | CTYRAG | 4 cut(s) | 130, 502, 645, 886 |
| SmoI | CTYRAG | 4 cut(s) | 130, 502, 645, 886 |
| Sse9I | AATT | 7 cut(s) | 113, 143, 190, 578, 801, 1667, 2318 |
| SsiI | CCGC | 6 cut(s) | 284, 340, 1213, 1940, 2030, 2091 |
| SspMI | CTAG | 4 cut(s) | 9, 1505, 1875, 2426 |
| StyI | CCWWGG | 1 cut(s) | 1043 |
| TaaI | ACNGT | 5 cut(s) | 44, 63, 547, 1252, 2077 |
| TaiI | ACGT | 5 cut(s) | 513, 1688, 1771, 1909, 1980 |
| TaqI | TCGA | 7 cut(s) | 270, 646, 745, 920, 1387, 1450, 1980 |
| TasI | AATT | 7 cut(s) | 113, 143, 190, 578, 801, 1667, 2318 |
| TatI | WGTACW | 2 cut(s) | 1723, 2344 |
| TauI | GCSGC | 1 cut(s) | 2032 |
| TfiI | GAWTC | 5 cut(s) | 55, 851, 1011, 1384, 2449 |
| Tru1I | TTAA | 8 cut(s) | 131, 189, 195, 870, 1265, 1322, 1728, 2470 |
| Tru9I | TTAA | 8 cut(s) | 131, 189, 195, 870, 1265, 1322, 1728, 2470 |
| TscAI | CASTG | 4 cut(s) | 316, 454, 697, 814 |
| TseFI | GTSAC | 3 cut(s) | 541, 1946, 2003 |
| Tsp45I | GTSAC | 3 cut(s) | 541, 1946, 2003 |
| TspDTI | ATGAA | 8 cut(s) | 47, 348, 440, 969, 978, 1050, 1329, 2053 |
| TspGWI | ACGGA | 3 cut(s) | 693, 983, 2159 |
| TspRI | CASTG | 4 cut(s) | 316, 454, 697, 814 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 251 |
| Vha464I | CTTAAG | 1 cut(s) | 130 |
| VpaK11BI | GGWCC | 3 cut(s) | 701, 902, 1916 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1171 |
| XapI | RAATTY | 1 cut(s) | 801 |
| XbaI | TCTAGA | 2 cut(s) | 8, 1504 |
| XceI | RCATGY | 2 cut(s) | 1537, 2297 |
| XhoI | CTCGAG | 1 cut(s) | 645 |
| XmnI | GAANNNNTTC | 1 cut(s) | 618 |
| XspI | CTAG | 4 cut(s) | 9, 1505, 1875, 2426 |
| ZrmI | AGTACT | 1 cut(s) | 1725 |
| Zsp2I | ATGCAT | 4 cut(s) | 571, 954, 1207, 1632 |