FvH4_6g40190

Flowering time control protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb6
OG0006758
Physical Location & Seq
Reverse (-)
31730718 .. 31739375
8658 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_6g40190.t1

Sequence Viewer

Length: 2742 bp
ATGGCGGGTCGCGGCGGAGGAAGGGACAGGCAGAGCGGCGGCGGACCGCGGCGGTTCGACGGCGGAAGAGGCAGCAAGGCGCCGCCGTCGAGACACTTGTGGATCGGGAACCTCTCTCACGGTATCACCGAGGACGAACTGACACGTCACTTTCTGAACTTCGGAGACTTGGAGAGCGTGGCGTTCCAGCCCGGCCGGAGCTATGCTTTCATCAATTTCAAGATGGAGGAGGACGCTAGGGCCGCCATGGAGGCTCTTAACGGCTTTCCGGTTGCCGGCAACCCGCTGAGGGTCGAGTTTACCAAGGCGGATAAATCATCAGTGCCATCACGTGAAGAAGATTACTCCCAACGGCGAGATGAACAACATTCAGCAGTAAGAGGATCTCCTTTGTTGCAAAGGGAGTTTAGAGCACGCCAAGATACTCCTGAGAAACTTTATCAAGAAAAATCCAGTATGGGTGATAAAAACACAGAGCCTAGTGAAGTACTATGGATAGGTTTTCCAGCTTTATTAAAGGTGGATGAATTCATATTAAGGAAGTCTTTTGCACCATTTGGTGAAATTGAGAAGATAACTGCCTTTCCTGGTCGTAGCTATGCGTTCGTTCGTTTTAGGAGTGTAATGTCAGCTAGCAGAGCGAAAGCAGCTCTTCAAGGGAAATTATTTGGAAACCCTCGTGTACATATTTGTTTTGCAAGGAACGACAACAGCTCATCAAACAGTGGAAGGAATTCAAGCGATGACCCTCCACCCCCACATGGGAAATTCACTGGTCGCTCTGGATCATCTGAGAACTTTCGACAAGATAGAAACTTTGGGAGCTTAACAGAGGATTTTAGCATCAGATCTCCTCAGTATTTCCCAACTTTGGATTCTGGTGGTTATGAGCCCTATAGTTTAAAGAGGAAAGGAAATTTATGGACAGATGAGGACAGTACATTTGAACAGAGGAGGCCTGGTGAAATATCTGACCTAGGACACACACAAGAAATGTATGGTTATCGGGGTAGTCCTACGAGTGAGAAATATGCTCATTTACGTGATTATTCTCAGAGATTTCCTCAAACAAATCCACCGTATGAAGAACCATGGGACTTACCAGATGACGTTCATTACTTTCATGGAGCCAAGAAGTTGAAGACAGAGTCTTACATTCCTGAGAAAGAGCTTCCAGAGTATCCAATGTCTGTCTATGAACAAGAAAAACTTGGTTTCCCCAGATTCACTGATTTTCACCAAGCTGACAATTCCAATAGAAACTTTGAGGCTGATCCATTTGGTTACAAACAAATCCCTGAACGACCAATCAATCTATCTCGACCTCCAGTTGAAAGGGGTGAGCCTTGGAAAGAATCTTATATACAGCCGGGTTCTCAGCTACTAAATTCTGTCGATAGGAAAAGATTTACTCCTGAATCAAAGAAGTCTTTGGAACTATGGAAATGGGAAGGGACTATAGCAAAGGGAGGAACTCCTGTCTGTCGTGCTCGTTGCTTTCCTGTGGGGAAGGTCCTTGACATTATCTTGCCTGAGTTTTTAGATTGTACTGCAAGGACTGGTCTAGATATGCTTTCTAAGCATTACGATCAAGCAACCAGTGCTTGGGTTGTGTTCTTTGCCCCTGGAAGTGATGCTGATATTGGATACTACAATGAATTTATGCAATATCTTGGGGAGAAGCAGAGAGCAGCCGTTGCCAAATTAGATGACAGGACCACCTTGTTTCTTGTACCCCCATCTGAGTTCTCAGAGAAAGTGCTGAAGGTACCTGGGAAATTAAGCATCTCTGGTGTTGTTTTAAGGTTAGACCAGCCTAGTTCCAACTTTGGATCTTATCACCAGCAACATGAACGAAATGACACTAGATTATTGTCATTTTCTGGGGACCCACCATATTCAAAATTGCCAACCCCTTCAGTATCCCATCCTCCGTTTACATCTTATCCTGATTCAAGTAAATCAGGAGTTAGTAACCTATCTTCGTTGGGGAACTTTTCATCAACTCCACCAGCTTCGTTTCCTGGGCCAGCTCATGGTGTTGGAAATGGATATGAATCTTACAATGAGAACATGCATGAATATCCACCTTATAAGGAAAGCCCTAGGTTGGGACCAAACTGGTCTTCTCAACACCCACAGAGTTCAGTTTCTGTTACTAGAAGCAGACCCAACCAGTTGTCCAATAATGCTGTTGATTCAGTTCTTCAGGAGCATCCCTCAGTCATGCAAAGGCCCCTGCAAGAGGCAATCCCTACTGGTGGAATGCCTCGTGTTCAAAACAGCAATTTCCAGGACACCCAGCCTTCAGTTTCTTTGCCTATGCCTCTTGTATCCCTGCAACCGGAGCAACTTGCCCGATTGGCGTCTCTTCTCGAACAGCAGAAGCAGTCTGGGAGCATTCCAAATCCATCCACGGGAGAAGATTTTAGGCACAGAAATGCAGTACATGAAACTGAGAACCTGCCAAGGACATGCCAGAAATTTACGCAGCAGAATAACCAGGTGACTTCTGTGCCCTCGACATCTCAGTTTGGTCAAGCTCAAGAGTTGCAGCAGCCGCAACAGCAGGTATCATATGTGCCTCACATGGTTCAAAGAGATCCTCAAGCAGGGGGTCAGGTAAATCAGCATCTGCATAATATTAATACAAATGAAGGCGGAGAAACAGATCGCATGCAAGCGACGCTACAGCTTGCAGCAGCTCTACTTCAGCAGATCCAACAAGGGAAAGGAAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000375 GO:0000377 GO:0000398 GO:0000785 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006325 GO:0006342 GO:0006355 GO:0006378 GO:0006396 GO:0006397 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008380 GO:0009553 GO:0009791 GO:0009889 GO:0009890 GO:0009892 GO:0009909 GO:0009911 GO:0009987 GO:0010228 GO:0010467 GO:0010468 GO:0010556 GO:0010558 GO:0010605 GO:0010629 GO:0016043 GO:0016070 GO:0016071 GO:0016458 GO:0019219 GO:0019222 GO:0022414 GO:0031047 GO:0031048 GO:0031123 GO:0031124 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0032501 GO:0032502 GO:0034641 GO:0040029 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043631 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0045814 GO:0045892 GO:0045934 GO:0046483 GO:0048229 GO:0048518 GO:0048519 GO:0048523 GO:0048580 GO:0048582 GO:0048608 GO:0048731 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0051094 GO:0051171 GO:0051172 GO:0051239 GO:0051240 GO:0051252 GO:0051253 GO:0051276 GO:0060255 GO:0061458 GO:0065007 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1902679 GO:1903506 GO:1903507 GO:2000026 GO:2000112 GO:2000113 GO:2000241 GO:2000243 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
RRM_1 SPOC

Protein Analysis

914

Amino Acids

102.39

Weight (kDa)

6.69

Isoelectric Point (pI)

55.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
RRM_1 PF00076 33 - 97 4.6e-12 RNA recognition motif
RRM_1 PF00076 179 - 227 2.5e-07 RNA recognition motif
SPOC PF07744 478 - 595 1.3e-24 SPOC domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2094
Acc36I ACCTGC 2 cut(s) 2472, 2560
Acc65I GGTACC 1 cut(s) 1768
AccB1I GGYRCC 2 cut(s) 79, 1768
AccB7I CCANNNNNTGG 2 cut(s) 1605, 2036
AccBSI CCGCTC 1 cut(s) 36
AccII CGCG 2 cut(s) 12, 49
AclWI GGATC 7 cut(s) 110, 391, 793, 1268, 1840, 2597, 2713
AcoI YGGCCR 1 cut(s) 193
AcsI RAATTY 7 cut(s) 527, 733, 767, 916, 1387, 1658, 2483
AcuI CTGAAG 5 cut(s) 1784, 1902, 2192, 2292, 2696
AcvI CACGTG 1 cut(s) 332
AcyI GRCGYC 2 cut(s) 80, 2366
AfaI GTAC 7 cut(s) 489, 684, 940, 1549, 1734, 1770, 2448
AflIII ACRYGT 1 cut(s) 143
AjiI CACGTC 1 cut(s) 146
AjnI CCWGG 7 cut(s) 586, 958, 1624, 1771, 2023, 2292, 2502
AjuI GAANNNNNNNTTGG 4 cut(s) 859, 891, 2110, 2142
Alw21I GWGCWC 2 cut(s) 415, 1492
Alw26I GTCTC 3 cut(s) 85, 159, 2373
AlwI GGATC 7 cut(s) 110, 391, 793, 1268, 1840, 2597, 2713
AlwNI CAGNNNCTG 2 cut(s) 2153, 2635
AoxI GGCC 5 cut(s) 193, 240, 956, 2027, 2234
ApeKI GCWGC 8 cut(s) 72, 647, 1691, 2491, 2554, 2557, 2699, 2702
ApoI RAATTY 7 cut(s) 527, 733, 767, 916, 1387, 1658, 2483
ArsI GACNNNNNNTTYG 2 cut(s) 926, 958
AseI ATTAAT 1 cut(s) 2646
Asp700I GAANNNNTTC 1 cut(s) 733
Asp718I GGTACC 1 cut(s) 1768
AspA2I CCTAGG 2 cut(s) 976, 2105
AspLEI GCGC 1 cut(s) 82
AspS9I GGNCC 8 cut(s) 44, 240, 1513, 1716, 1888, 2027, 2114, 2235
AsuC2I CCSGG 2 cut(s) 192, 1371
AsuHPI GGTGA 8 cut(s) 118, 473, 572, 974, 1229, 1352, 1832, 2518
AsuNHI GCTAGC 1 cut(s) 632
AvaII GGWCC 5 cut(s) 44, 1513, 1716, 1888, 2114
AvrII CCTAGG 2 cut(s) 976, 2105
BaeGI GKGCMC 1 cut(s) 2520
BanI GGYRCC 2 cut(s) 79, 1768
BanII GRGCYC 1 cut(s) 894
BarI GAAGNNNNNNTAC 2 cut(s) 1966, 1998
BauI CACGAG 2 cut(s) 678, 2271
BbrPI CACGTG 1 cut(s) 332
BbsI GAAGAC 2 cut(s) 1148, 2118
Bbv12I GWGCWC 2 cut(s) 415, 1492
BbvCI CCTCAGC 1 cut(s) 287
BbvI GCAGC 8 cut(s) 84, 659, 1703, 2503, 2566, 2569, 2711, 2714
BccI CCATC 5 cut(s) 217, 334, 1747, 1935, 2419
BceAI ACGGC 5 cut(s) 70, 76, 277, 368, 1679
BciT130I CCWGG 7 cut(s) 588, 960, 1626, 1773, 2025, 2294, 2504
BciVI GTATCC 4 cut(s) 1191, 1640, 1933, 2344
BcnI CCSGG 2 cut(s) 192, 1371
BcoDI GTCTC 3 cut(s) 85, 159, 2373
BfaI CTAG 9 cut(s) 237, 480, 633, 977, 1565, 1818, 1866, 2106, 2160
BfmI CTRYAG 3 cut(s) 895, 1458, 2690
BfoI RGCGCY 1 cut(s) 83
BfuAI ACCTGC 2 cut(s) 2472, 2560
BfuI GTATCC 4 cut(s) 1191, 1640, 1933, 2344
BglI GCCNNNNNGGC 2 cut(s) 251, 2363
BglII AGATCT 1 cut(s) 848
BlnI CCTAGG 2 cut(s) 976, 2105
BmcAI AGTACT 1 cut(s) 489
Bme1390I CCNGG 9 cut(s) 192, 588, 960, 1371, 1626, 1773, 2025, 2294, 2504
Bme18I GGWCC 5 cut(s) 44, 1513, 1716, 1888, 2114
BmgBI CACGTC 1 cut(s) 146
BmgT120I GGNCC 8 cut(s) 44, 240, 1513, 1716, 1888, 2027, 2114, 2235
BmiI GGNNCC 8 cut(s) 81, 110, 1129, 1770, 1889, 1890, 2115, 2237
BmrFI CCNGG 9 cut(s) 192, 588, 960, 1371, 1626, 1773, 2025, 2294, 2504
BmsI GCATC 5 cut(s) 852, 1624, 1794, 2224, 2641
BmtI GCTAGC 1 cut(s) 636
BpiI GAAGAC 2 cut(s) 1148, 2118
BplI GAGNNNNNCTC 4 cut(s) 1048, 1080, 2204, 2236
BpmI CTGGAG 1 cut(s) 1311
Bpu10I CCTNAGC 1 cut(s) 287
BpuEI CTTGAG 2 cut(s) 2529, 2592
BpuMI CCSGG 2 cut(s) 192, 1371
BsaAI YACGTR 2 cut(s) 332, 1043
BsaBI GATNNNNATC 1 cut(s) 2056
BsaHI GRCGYC 2 cut(s) 80, 2366
BsaWI WCCGGW 2 cut(s) 268, 2344
BsaXI ACNNNNNCTCC 2 cut(s) 946, 976
Bse118I RCCGGY 1 cut(s) 275
Bse1I ACTGG 8 cut(s) 453, 778, 1328, 1564, 1599, 2126, 2176, 2263
Bse8I GATNNNNATC 1 cut(s) 2056
BseBI CCWGG 7 cut(s) 588, 960, 1626, 1773, 2025, 2294, 2504
BseGI GGATG 4 cut(s) 529, 1927, 2215, 2411
BseJI GATNNNNATC 1 cut(s) 2056
BseNI ACTGG 8 cut(s) 453, 778, 1328, 1564, 1599, 2126, 2176, 2263
BseRI GAGGAG 3 cut(s) 242, 843, 967
BseSI GKGCMC 1 cut(s) 2520
BseX3I CGGCCG 1 cut(s) 193
BseXI GCAGC 8 cut(s) 84, 659, 1703, 2503, 2566, 2569, 2711, 2714
BseYI CCCAGC 1 cut(s) 2301
Bsh1236I CGCG 2 cut(s) 12, 49
Bsh1285I CGRYCG 1 cut(s) 196
BshFI GGCC 5 cut(s) 195, 242, 958, 2029, 2236
BshNI GGYRCC 2 cut(s) 79, 1768
BsiEI CGRYCG 1 cut(s) 196
BsiHKAI GWGCWC 2 cut(s) 415, 1492
BsiSI CCGG 6 cut(s) 192, 196, 269, 276, 1370, 2345
BslFI GGGAC 5 cut(s) 38, 1109, 1468, 1901, 2127
BsmAI GTCTC 3 cut(s) 85, 159, 2373
BsmBI CGTCTC 1 cut(s) 2373
BsmFI GGGAC 5 cut(s) 38, 1109, 1468, 1901, 2127
BsmI GAATGC 2 cut(s) 2271, 2400
BsnI GGCC 5 cut(s) 195, 242, 958, 2029, 2236
Bsp1286I GDGCHC 4 cut(s) 415, 894, 1492, 2520
Bsp1407I TGTACA 1 cut(s) 682
Bsp19I CCATGG 2 cut(s) 246, 1091
BspANI GGCC 5 cut(s) 195, 242, 958, 2029, 2236
BspFNI CGCG 2 cut(s) 12, 49
BspLI GGNNCC 8 cut(s) 81, 110, 1129, 1770, 1889, 1890, 2115, 2237
BspMI ACCTGC 2 cut(s) 2472, 2560
BspOI GCTAGC 1 cut(s) 636
BspPI GGATC 7 cut(s) 110, 391, 793, 1268, 1840, 2597, 2713
BspQI GCTCTTC 1 cut(s) 657
BspT107I GGYRCC 2 cut(s) 79, 1768
BsrBI CCGCTC 1 cut(s) 36
BsrFI RCCGGY 1 cut(s) 275
BsrGI TGTACA 1 cut(s) 682
BsrI ACTGG 8 cut(s) 453, 778, 1328, 1564, 1599, 2126, 2176, 2263
BssAI RCCGGY 1 cut(s) 275
BssNI GRCGYC 2 cut(s) 80, 2366
BssSI CACGAG 2 cut(s) 678, 2271
BssT1I CCWWGG 7 cut(s) 246, 303, 976, 1091, 1346, 2105, 2468
Bst2BI CACGAG 2 cut(s) 678, 2271
Bst2UI CCWGG 7 cut(s) 588, 960, 1626, 1773, 2025, 2294, 2504
Bst4CI ACNGT 4 cut(s) 122, 725, 938, 1080
Bst6I CTCTTC 3 cut(s) 61, 657, 2376
BstACI GRCGYC 2 cut(s) 80, 2366
BstAPI GCANNNNNTGC 2 cut(s) 1601, 1697
BstAUI TGTACA 1 cut(s) 682
BstBAI YACGTR 2 cut(s) 332, 1043
BstC8I GCNNGC 7 cut(s) 277, 415, 634, 2031, 2678, 2682, 2697
BstDSI CCRYGG 4 cut(s) 47, 246, 1091, 2415
BstENI CCTNNNNNAGG 2 cut(s) 2243, 2610
BstF5I GGATG 4 cut(s) 529, 1927, 2215, 2411
BstFNI CGCG 2 cut(s) 12, 49
BstH2I RGCGCY 1 cut(s) 83
BstHHI GCGC 1 cut(s) 82
BstMAI GTCTC 3 cut(s) 85, 159, 2373
BstMCI CGRYCG 1 cut(s) 196
BstNI CCWGG 7 cut(s) 588, 960, 1626, 1773, 2025, 2294, 2504
BstNSI RCATGY 3 cut(s) 2077, 2478, 2680
BstSCI CCNGG 9 cut(s) 190, 586, 958, 1369, 1624, 1771, 2023, 2292, 2502
BstSFI CTRYAG 3 cut(s) 895, 1458, 2690
BstSLI GKGCMC 1 cut(s) 2520
BstUI CGCG 2 cut(s) 12, 49
BstV1I GCAGC 8 cut(s) 84, 659, 1703, 2503, 2566, 2569, 2711, 2714
BstV2I GAAGAC 2 cut(s) 1148, 2118
BstX2I RGATCY 5 cut(s) 383, 848, 1832, 2602, 2718
BstYI RGATCY 5 cut(s) 383, 848, 1832, 2602, 2718
BstZI CGGCCG 1 cut(s) 193
BsuI GTATCC 4 cut(s) 1191, 1640, 1933, 2344
BsuRI GGCC 5 cut(s) 195, 242, 958, 2029, 2236
BtgI CCRYGG 4 cut(s) 47, 246, 1091, 2415
BtgZI GCGATG 1 cut(s) 756
BtrI CACGTC 1 cut(s) 146
BtsCI GGATG 4 cut(s) 529, 1927, 2215, 2411
BtsIMutI CAGTG 5 cut(s) 327, 730, 771, 1227, 1606
BveI ACCTGC 2 cut(s) 2472, 2560
Cac8I GCNNGC 7 cut(s) 277, 415, 634, 2031, 2678, 2682, 2697
CaiI CAGNNNCTG 2 cut(s) 2153, 2635
CfoI GCGC 1 cut(s) 82
Cfr10I RCCGGY 1 cut(s) 275
Cfr13I GGNCC 8 cut(s) 44, 240, 1513, 1716, 1888, 2027, 2114, 2235
Cfr42I CCGCGG 1 cut(s) 50
CpoI CGGWCCG 1 cut(s) 44
CseI GACGC 3 cut(s) 242, 2355, 2695
CsiI ACCWGGT 1 cut(s) 2502
Csp6I GTAC 7 cut(s) 488, 683, 939, 1548, 1733, 1769, 2447
CspI CGGWCCG 1 cut(s) 44
CviQI GTAC 7 cut(s) 488, 683, 939, 1548, 1733, 1769, 2447
DinI GGCGCC 1 cut(s) 81
DraI TTTAAA 1 cut(s) 903
EaeI YGGCCR 1 cut(s) 193
EagI CGGCCG 1 cut(s) 193
Eam1104I CTCTTC 3 cut(s) 61, 657, 2376
EarI CTCTTC 3 cut(s) 61, 657, 2376
EciI GGCGGA 5 cut(s) 30, 57, 78, 323, 2676
EclXI CGGCCG 1 cut(s) 193
Eco130I CCWWGG 7 cut(s) 246, 303, 976, 1091, 1346, 2105, 2468
Eco147I AGGCCT 1 cut(s) 958
Eco24I GRGCYC 1 cut(s) 894
Eco47I GGWCC 5 cut(s) 44, 1513, 1716, 1888, 2114
Eco52I CGGCCG 1 cut(s) 193
Eco57I CTGAAG 5 cut(s) 1784, 1902, 2192, 2292, 2696
Eco72I CACGTG 1 cut(s) 332
EcoNI CCTNNNNNAGG 2 cut(s) 2243, 2610
EcoO109I RGGNCCY 3 cut(s) 1513, 1888, 2235
EcoRI GAATTC 2 cut(s) 527, 733
EcoRII CCWGG 7 cut(s) 586, 958, 1624, 1771, 2023, 2292, 2502
EcoT14I CCWWGG 7 cut(s) 246, 303, 976, 1091, 1346, 2105, 2468
EcoT22I ATGCAT 1 cut(s) 2079
EcoT38I GRGCYC 1 cut(s) 894
EgeI GGCGCC 1 cut(s) 81
EheI GGCGCC 1 cut(s) 81
ErhI CCWWGG 7 cut(s) 246, 303, 976, 1091, 1346, 2105, 2468
Esp3I CGTCTC 1 cut(s) 2373
FalI AAGNNNNNCTT 6 cut(s) 529, 561, 636, 668, 1194, 1226
FaqI GGGAC 5 cut(s) 38, 1109, 1468, 1901, 2127
FauI CCCGC 1 cut(s) 291
FauNDI CATATG 1 cut(s) 2578
FokI GGATG 4 cut(s) 536, 1914, 2202, 2398
FriOI GRGCYC 1 cut(s) 894
FspBI CTAG 9 cut(s) 237, 480, 633, 977, 1565, 1818, 1866, 2106, 2160
GlaI GCGC 1 cut(s) 81
GsaI CCCAGC 1 cut(s) 2305
GsuI CTGGAG 1 cut(s) 1311
HaeII RGCGCY 1 cut(s) 83
HaeIII GGCC 5 cut(s) 195, 242, 958, 2029, 2236
HapII CCGG 6 cut(s) 192, 196, 269, 276, 1370, 2345
HgaI GACGC 3 cut(s) 242, 2355, 2695
HhaI GCGC 1 cut(s) 82
Hin1I GRCGYC 2 cut(s) 80, 2366
Hin6I GCGC 1 cut(s) 80
HinP1I GCGC 1 cut(s) 80
HinfI GANTC 8 cut(s) 875, 1148, 1224, 1355, 1418, 1952, 2057, 2198
HpaII CCGG 6 cut(s) 192, 196, 269, 276, 1370, 2345
HphI GGTGA 8 cut(s) 118, 473, 572, 974, 1229, 1352, 1832, 2518
Hpy166II GTNNAC 3 cut(s) 300, 683, 1938
Hpy188I TCNGA 8 cut(s) 156, 164, 793, 848, 973, 1056, 1744, 1753
Hpy8I GTNNAC 3 cut(s) 300, 683, 1938
Hpy99I CGWCG 3 cut(s) 62, 91, 2689
HpyAV CCTTC 8 cut(s) 15, 723, 1445, 1504, 1759, 1926, 2316, 2651
HpyCH4III ACNGT 4 cut(s) 122, 725, 938, 1080
HpyCH4IV ACGT 4 cut(s) 145, 331, 1042, 1110
HpySE526I ACGT 4 cut(s) 145, 331, 1042, 1110
Hsp92I GRCGYC 2 cut(s) 80, 2366
HspAI GCGC 1 cut(s) 80
KasI GGCGCC 1 cut(s) 79
KflI GGGWCCC 1 cut(s) 1888
KpnI GGTACC 1 cut(s) 1772
KroI GCCGGC 1 cut(s) 275
KroNI GCCGGC 1 cut(s) 277
KspI CCGCGG 1 cut(s) 50
LguI GCTCTTC 1 cut(s) 657
LmnI GCTCC 6 cut(s) 198, 822, 1127, 2212, 2347, 2397
Lsp1109I GCAGC 8 cut(s) 84, 659, 1703, 2503, 2566, 2569, 2711, 2714
LweI GCATC 5 cut(s) 852, 1624, 1794, 2224, 2641
MabI ACCWGGT 1 cut(s) 2502
MaeI CTAG 9 cut(s) 237, 480, 633, 977, 1565, 1818, 1866, 2106, 2160
MaeII ACGT 4 cut(s) 145, 331, 1042, 1110
MaeIII GTNAC 5 cut(s) 146, 1283, 1973, 2155, 2506
MbiI CCGCTC 1 cut(s) 36
MflI RGATCY 5 cut(s) 383, 848, 1832, 2602, 2718
MhlI GDGCHC 4 cut(s) 415, 894, 1492, 2520
Mly113I GGCGCC 1 cut(s) 80
MlyI GAGTC 1 cut(s) 1157
MmeI TCCRAC 2 cut(s) 1848, 2023
Mph1103I ATGCAT 1 cut(s) 2079
MroNI GCCGGC 1 cut(s) 275
MroXI GAANNNNTTC 1 cut(s) 733
MseI TTAA 8 cut(s) 258, 515, 536, 827, 902, 1781, 1802, 2646
MslI CAYNNNNRTG 2 cut(s) 1041, 2439
MspA1I CMGCKG 2 cut(s) 49, 286
MspI CCGG 6 cut(s) 192, 196, 269, 276, 1370, 2345
MspR9I CCNGG 9 cut(s) 192, 588, 960, 1371, 1626, 1773, 2025, 2294, 2504
Mva1269I GAATGC 2 cut(s) 2271, 2400
MvaI CCWGG 7 cut(s) 588, 960, 1626, 1773, 2025, 2294, 2504
MvnI CGCG 2 cut(s) 12, 49
NaeI GCCGGC 1 cut(s) 277
NarI GGCGCC 1 cut(s) 80
NciI CCSGG 2 cut(s) 192, 1371
NcoI CCATGG 2 cut(s) 246, 1091
NdeI CATATG 1 cut(s) 2578
NgoMIV GCCGGC 1 cut(s) 275
NheI GCTAGC 1 cut(s) 632
NlaIV GGNNCC 8 cut(s) 81, 110, 1129, 1770, 1889, 1890, 2115, 2237
NmuCI GTSAC 2 cut(s) 146, 2506
NsiI ATGCAT 1 cut(s) 2079
NspI RCATGY 3 cut(s) 2077, 2478, 2680
PaeI GCATGC 1 cut(s) 2680
PceI AGGCCT 1 cut(s) 958
PciSI GCTCTTC 1 cut(s) 657
PcsI WCGNNNNNNNCGW 1 cut(s) 126
PctI GAATGC 2 cut(s) 2271, 2400
PdiI GCCGGC 1 cut(s) 277
PdmI GAANNNNTTC 1 cut(s) 733
PfeI GAWTC 7 cut(s) 875, 1224, 1355, 1418, 1952, 2057, 2198
PflFI GACNNNGTC 1 cut(s) 1147
PflMI CCANNNNNTGG 2 cut(s) 1605, 2036
PfoI TCCNGGA 1 cut(s) 2292
PleI GAGTC 1 cut(s) 1156
PluTI GGCGCC 1 cut(s) 83
PmaCI CACGTG 1 cut(s) 332
PmlI CACGTG 1 cut(s) 332
PpsI GAGTC 1 cut(s) 1156
Ppu21I YACGTR 2 cut(s) 332, 1043
PpuMI RGGWCCY 2 cut(s) 1513, 1888
PshBI ATTAAT 1 cut(s) 2646
PsiI TTATAA 1 cut(s) 2094
Psp5II RGGWCCY 2 cut(s) 1513, 1888
Psp6I CCWGG 7 cut(s) 586, 958, 1624, 1771, 2023, 2292, 2502
PspCI CACGTG 1 cut(s) 332
PspFI CCCAGC 1 cut(s) 2301
PspGI CCWGG 7 cut(s) 586, 958, 1624, 1771, 2023, 2292, 2502
PspN4I GGNNCC 8 cut(s) 81, 110, 1129, 1770, 1889, 1890, 2115, 2237
PspPI GGNCC 8 cut(s) 44, 240, 1513, 1716, 1888, 2027, 2114, 2235
PspPPI RGGWCCY 2 cut(s) 1513, 1888
PstNI CAGNNNCTG 2 cut(s) 2153, 2635
PsuI RGATCY 5 cut(s) 383, 848, 1832, 2602, 2718
PsyI GACNNNGTC 1 cut(s) 1147
RsaI GTAC 7 cut(s) 489, 684, 940, 1549, 1734, 1770, 2448
RsaNI GTAC 7 cut(s) 488, 683, 939, 1548, 1733, 1769, 2447
RseI CAYNNNNRTG 2 cut(s) 1041, 2439
Rsr2I CGGWCCG 1 cut(s) 44
RsrII CGGWCCG 1 cut(s) 44
SacII CCGCGG 1 cut(s) 50
SapI GCTCTTC 1 cut(s) 657
SaqAI TTAA 8 cut(s) 258, 515, 536, 827, 902, 1781, 1802, 2646
Sau96I GGNCC 8 cut(s) 44, 240, 1513, 1716, 1888, 2027, 2114, 2235
ScaI AGTACT 1 cut(s) 489
SchI GAGTC 1 cut(s) 1157
ScrFI CCNGG 9 cut(s) 192, 588, 960, 1371, 1626, 1773, 2025, 2294, 2504
SduI GDGCHC 4 cut(s) 415, 894, 1492, 2520
SexAI ACCWGGT 1 cut(s) 2502
SfaNI GCATC 5 cut(s) 852, 1624, 1794, 2224, 2641
SfcI CTRYAG 3 cut(s) 895, 1458, 2690
SfoI GGCGCC 1 cut(s) 81
Sfr303I CCGCGG 1 cut(s) 50
SgrBI CCGCGG 1 cut(s) 50
SinI GGWCC 5 cut(s) 44, 1513, 1716, 1888, 2114
SmiMI CAYNNNNRTG 2 cut(s) 1041, 2439
SmlI CTYRAG 2 cut(s) 2544, 2607
SmoI CTYRAG 2 cut(s) 2544, 2607
SphI GCATGC 1 cut(s) 2680
SseBI AGGCCT 1 cut(s) 958
SspDI GGCGCC 1 cut(s) 79
SspI AATATT 1 cut(s) 2644
SspMI CTAG 9 cut(s) 237, 480, 633, 977, 1565, 1818, 1866, 2106, 2160
StuI AGGCCT 1 cut(s) 958
StyD4I CCNGG 9 cut(s) 190, 586, 958, 1369, 1624, 1771, 2023, 2292, 2502
StyI CCWWGG 7 cut(s) 246, 303, 976, 1091, 1346, 2105, 2468
TaaI ACNGT 4 cut(s) 122, 725, 938, 1080
TaiI ACGT 4 cut(s) 148, 334, 1045, 1113
TaqI TCGA 8 cut(s) 57, 89, 294, 802, 1321, 1395, 2376, 2522
TatI WGTACW 5 cut(s) 487, 682, 938, 1547, 2446
TauI GCSGC 7 cut(s) 15, 39, 42, 52, 85, 245, 2563
TfiI GAWTC 7 cut(s) 875, 1224, 1355, 1418, 1952, 2057, 2198
Tru1I TTAA 8 cut(s) 258, 515, 536, 827, 902, 1781, 1802, 2646
Tru9I TTAA 8 cut(s) 258, 515, 536, 827, 902, 1781, 1802, 2646
TscAI CASTG 5 cut(s) 327, 730, 778, 1234, 1606
TseFI GTSAC 2 cut(s) 146, 2506
TseI GCWGC 8 cut(s) 72, 647, 1691, 2491, 2554, 2557, 2699, 2702
Tsp45I GTSAC 2 cut(s) 146, 2506
TspGWI ACGGA 1 cut(s) 1923
TspRI CASTG 5 cut(s) 327, 730, 778, 1234, 1606
Tth111I GACNNNGTC 1 cut(s) 1147
Van91I CCANNNNNTGG 2 cut(s) 1605, 2036
VpaK11BI GGWCC 5 cut(s) 44, 1513, 1716, 1888, 2114
VspI ATTAAT 1 cut(s) 2646
XagI CCTNNNNNAGG 2 cut(s) 2243, 2610
XapI RAATTY 7 cut(s) 527, 733, 767, 916, 1387, 1658, 2483
XbaI TCTAGA 1 cut(s) 1564
XceI RCATGY 3 cut(s) 2077, 2478, 2680
XmaJI CCTAGG 2 cut(s) 976, 2105
XmnI GAANNNNTTC 1 cut(s) 733
XspI CTAG 9 cut(s) 237, 480, 633, 977, 1565, 1818, 1866, 2106, 2160
ZrmI AGTACT 1 cut(s) 489
Zsp2I ATGCAT 1 cut(s) 2079
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.