AT4G13020

Serine/Threonine protein kinases, catalytic domain

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Forward (+)
7602989 .. 7607155
4167 bp
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UTR
Exon/CDS
Intron
AT4G13020.7

Sequence Viewer

Length: 1308 bp
ATGGAAAGGTATAAGATTTTGGAAGAGCTTGGTGATGGTACTTGTGGTAGTGTATATAAAGCAGTAAATTTGGAAACATATGAAGTTGTTGCTGTTAAGAAGATGAAGAGAAAGTTTTATTATTGGGAAGAGTGTGTGAATCTGCGAGAAGTTAAGGCTCTTCGTAAGCTAAATCATCCTCATATCATAAAGTTGAAGGAGATTGTGAGAGAACATAATGAGCTTTTTTTCATCTTTGAGTGCATGGATCACAATCTGTACCATATAATGAAAGAAAGGGAACGACCTTTTTCTGAAGGAGAAATAAGAAGTTTTATGTCTCAGATGCTGCAAGGGCTCGCACACATGCATAAAAACGGTTATTTCCATCGAGACCTGAAACCTGAGAATTTGCTGGTGACCAACAATATCCTGAAAATTGCTGACTTTGGGTTGGCTAGAGAAGTTGCATCTATGCCTCCTTACACTGAATATGTGTCCACACGTTGGTATCGAGCTCCAGAAGTTTTGCTACAGTCTTCATTATACACTCCTGCAGTTGACATGTGGGCAGTTGGAGCGATACTAGCTGAGCTTTACGCTTTAACTCCGTTATTTCCTGGTGAAAGTGAGATAGATCAATTATACAAAATCTGCTGTGTTCTTGGCAAGCCGGACTGGACCACGTTCCCTGAAGCGAAAAGCATATCTCGAATTATGAGTATTAGTCACACAGAGTTTCCGCAGACACGAATTGCTGATTTACTTCCCAATGCTGCTCCTGAAGCTATTGATTTGATCAATCGACTTTGCTCATGGGATCCATTGAAACGACCAACTGCTGATGAGGCACTAAATCATCCATTTTTCAGTATGGCTACGCAGGCTTCATATCCTATCCATGACCTTGAGCTGAGGCTTGATAATATGGCGGCGTTGCCTAATCTTGAGCTAAATCTCTGGGACTTTAACAGAGAACCTGAAGAATGTTTTCTTGGCTTGACACTAGCTGTGAAACCAAGTGCTCCCAAACTAGAAATGCTCCGCAATGTATCTCAGGACATGAGCGAGAATTTTCTCTTTTGCCCCGGGGTCAACAATGATCGAGAACCATCAGTTTTCTGGTCTCTGCTCTCTCCTGATGAAAACGGCCTCCACGCGCCAGTTGAATCATCTCCTTTATCTTTGTCTTTCAGTCCAATGCAGCAACACACAGTTGGACCTCCACAGTCGAGTGGCTTCACAATGACATCATCAATGCAACCGAATATGTTGGACCGCCCGTGGATGGCCGTGTCTGCGCCGTTTCAACAAAGTCATTACCTCTGA

Protein Analysis

435

Amino Acids

49.97

Weight (kDa)

5.51

Isoelectric Point (pI)

58.08

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 4 - 283 5.6e-73 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 5 - 195 3.2e-34 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 486
AccII CGCG 1 cut(s) 1139
AciI CCGC 4 cut(s) 722, 911, 1024, 1258
AclWI GGATC 3 cut(s) 255, 794, 807
AcoI YGGCCR 1 cut(s) 1269
AcsI RAATTY 3 cut(s) 67, 388, 1051
AcuI CTGAAG 4 cut(s) 315, 693, 783, 981
AfaI GTAC 2 cut(s) 40, 260
AfiI CCNNNNNNNGG 2 cut(s) 486, 1267
AflIII ACRYGT 2 cut(s) 482, 543
AgsI TTSAA 4 cut(s) 196, 808, 1148, 1289
AjnI CCWGG 1 cut(s) 598
AjuI GAANNNNNNNTTGG 2 cut(s) 957, 989
Alw21I GWGCWC 2 cut(s) 499, 1006
Alw26I GTCTC 3 cut(s) 324, 366, 1110
AlwI GGATC 3 cut(s) 255, 794, 807
AlwNI CAGNNNCTG 1 cut(s) 328
Ama87I CYCGRG 1 cut(s) 1067
AoxI GGCC 2 cut(s) 1129, 1269
ApeKI GCWGC 3 cut(s) 328, 755, 1183
ApoI RAATTY 3 cut(s) 67, 388, 1051
Asp700I GAANNNNTTC 1 cut(s) 969
AspLEI GCGC 2 cut(s) 1141, 1282
AspS9I GGNCC 3 cut(s) 660, 1199, 1255
AsuC2I CCSGG 2 cut(s) 1068, 1069
AsuHPI GGTGA 3 cut(s) 44, 409, 614
AvaI CYCGRG 1 cut(s) 1067
AvaII GGWCC 3 cut(s) 660, 1199, 1255
BaeI ACNNNNGTAYC 2 cut(s) 473, 506
BamHI GGATCC 1 cut(s) 799
BanII GRGCYC 2 cut(s) 339, 499
BarI GAAGNNNNNNTAC 2 cut(s) 495, 527
BbsI GAAGAC 1 cut(s) 510
Bbv12I GWGCWC 2 cut(s) 499, 1006
BbvCI CCTCAGC 1 cut(s) 893
BbvI GCAGC 3 cut(s) 315, 742, 1195
BccI CCATC 4 cut(s) 29, 375, 1099, 1261
BceAI ACGGC 3 cut(s) 1144, 1256, 1267
BciT130I CCWGG 1 cut(s) 600
BclI TGATCA 1 cut(s) 777
BcnI CCSGG 2 cut(s) 1068, 1069
BcoDI GTCTC 3 cut(s) 324, 366, 1110
BfaI CTAG 4 cut(s) 438, 566, 986, 1013
BfmI CTRYAG 2 cut(s) 512, 534
BisI GCNGC 4 cut(s) 329, 756, 912, 1184
BlpI GCTNAGC 1 cut(s) 570
BlsI GCNGC 4 cut(s) 330, 757, 913, 1185
Bme1390I CCNGG 3 cut(s) 600, 1068, 1069
Bme18I GGWCC 3 cut(s) 660, 1199, 1255
BmeT110I CYCGRG 1 cut(s) 1067
BmgT120I GGNCC 3 cut(s) 660, 1199, 1255
BmiI GGNNCC 1 cut(s) 801
BmrFI CCNGG 3 cut(s) 600, 1068, 1069
BmsI GCATC 2 cut(s) 315, 458
BpiI GAAGAC 1 cut(s) 510
BpmI CTGGAG 1 cut(s) 483
Bpu10I CCTNAGC 1 cut(s) 893
Bpu1102I GCTNAGC 1 cut(s) 570
BpuEI CTTGAG 2 cut(s) 908, 947
BpuMI CCSGG 2 cut(s) 1068, 1069
BsaBI GATNNNNATC 1 cut(s) 252
BsaI GGTCTC 2 cut(s) 366, 1110
BsaJI CCNNGG 4 cut(s) 1066, 1067, 1068, 1262
Bsc4I CCNNNNNNNGG 2 cut(s) 486, 1267
Bse1I ACTGG 2 cut(s) 662, 1142
Bse3DI GCAATG 1 cut(s) 1033
Bse8I GATNNNNATC 1 cut(s) 252
BseBI CCWGG 1 cut(s) 600
BseDI CCNNGG 4 cut(s) 1066, 1067, 1068, 1262
BseGI GGATG 3 cut(s) 175, 838, 1272
BseJI GATNNNNATC 1 cut(s) 252
BseLI CCNNNNNNNGG 2 cut(s) 486, 1267
BseMI GCAATG 1 cut(s) 1033
BseMII CTCAG 5 cut(s) 335, 375, 561, 884, 1049
BseNI ACTGG 2 cut(s) 662, 1142
BseXI GCAGC 3 cut(s) 315, 742, 1195
Bsh1236I CGCG 1 cut(s) 1139
BshFI GGCC 2 cut(s) 1131, 1271
BsiHKAI GWGCWC 2 cut(s) 499, 1006
BsiHKCI CYCGRG 1 cut(s) 1067
BsiSI CCGG 2 cut(s) 653, 1068
BslFI GGGAC 1 cut(s) 956
BslI CCNNNNNNNGG 2 cut(s) 486, 1267
BsmAI GTCTC 3 cut(s) 324, 366, 1110
BsmFI GGGAC 1 cut(s) 956
BsnI GGCC 2 cut(s) 1131, 1271
Bso31I GGTCTC 2 cut(s) 366, 1110
BsoBI CYCGRG 1 cut(s) 1067
Bsp1286I GDGCHC 3 cut(s) 339, 499, 1006
Bsp143I GATC 5 cut(s) 247, 616, 777, 799, 1081
Bsp1720I GCTNAGC 1 cut(s) 570
BspACI CCGC 4 cut(s) 722, 911, 1024, 1258
BspANI GGCC 2 cut(s) 1131, 1271
BspCNI CTCAG 5 cut(s) 334, 376, 562, 885, 1048
BspFNI CGCG 1 cut(s) 1139
BspLI GGNNCC 1 cut(s) 801
BspMAI CTGCAG 1 cut(s) 538
BspPI GGATC 3 cut(s) 255, 794, 807
BspQI GCTCTTC 2 cut(s) 18, 165
BspTNI GGTCTC 2 cut(s) 366, 1110
BsrDI GCAATG 1 cut(s) 1033
BsrI ACTGG 2 cut(s) 662, 1142
BssECI CCNNGG 4 cut(s) 1066, 1067, 1068, 1262
BssMI GATC 5 cut(s) 247, 616, 777, 799, 1081
Bst2UI CCWGG 1 cut(s) 600
Bst4CI ACNGT 4 cut(s) 359, 516, 1195, 1209
Bst6I CTCTTC 4 cut(s) 18, 101, 123, 165
BstC8I GCNNGC 3 cut(s) 339, 650, 864
BstDEI CTNAG 5 cut(s) 321, 384, 570, 893, 1035
BstDSI CCRYGG 1 cut(s) 1262
BstEII GGTNACC 1 cut(s) 397
BstF5I GGATG 3 cut(s) 175, 838, 1272
BstFNI CGCG 1 cut(s) 1139
BstHHI GCGC 2 cut(s) 1141, 1282
BstKTI GATC 5 cut(s) 250, 619, 780, 802, 1084
BstMAI GTCTC 3 cut(s) 324, 366, 1110
BstMBI GATC 5 cut(s) 247, 616, 777, 799, 1081
BstMWI GCNNNNNNNGC 7 cut(s) 334, 557, 566, 764, 827, 863, 1277
BstNI CCWGG 1 cut(s) 600
BstNSI RCATGY 2 cut(s) 349, 547
BstPI GGTNACC 1 cut(s) 397
BstSCI CCNGG 3 cut(s) 598, 1066, 1067
BstSFI CTRYAG 2 cut(s) 512, 534
BstUI CGCG 1 cut(s) 1139
BstV1I GCAGC 3 cut(s) 315, 742, 1195
BstV2I GAAGAC 1 cut(s) 510
BstX2I RGATCY 1 cut(s) 799
BstYI RGATCY 1 cut(s) 799
BsuRI GGCC 2 cut(s) 1131, 1271
BtgI CCRYGG 1 cut(s) 1262
BtsCI GGATG 3 cut(s) 175, 838, 1272
BtsIMutI CAGTG 1 cut(s) 465
Cac8I GCNNGC 3 cut(s) 339, 650, 864
CaiI CAGNNNCTG 1 cut(s) 328
CfoI GCGC 2 cut(s) 1141, 1282
Cfr13I GGNCC 3 cut(s) 660, 1199, 1255
Cfr9I CCCGGG 1 cut(s) 1067
Csp6I GTAC 2 cut(s) 39, 259
CviAII CATG 6 cut(s) 244, 346, 544, 795, 881, 1042
CviQI GTAC 2 cut(s) 39, 259
DdeI CTNAG 5 cut(s) 321, 384, 570, 893, 1035
DpnI GATC 5 cut(s) 249, 618, 779, 801, 1083
DpnII GATC 5 cut(s) 247, 616, 777, 799, 1081
EaeI YGGCCR 1 cut(s) 1269
Eam1104I CTCTTC 4 cut(s) 18, 101, 123, 165
EarI CTCTTC 4 cut(s) 18, 101, 123, 165
Ecl136II GAGCTC 1 cut(s) 497
Eco24I GRGCYC 2 cut(s) 339, 499
Eco31I GGTCTC 2 cut(s) 366, 1110
Eco47I GGWCC 3 cut(s) 660, 1199, 1255
Eco53kI GAGCTC 1 cut(s) 497
Eco57I CTGAAG 4 cut(s) 315, 693, 783, 981
Eco88I CYCGRG 1 cut(s) 1067
Eco91I GGTNACC 1 cut(s) 397
EcoICRI GAGCTC 1 cut(s) 497
EcoO65I GGTNACC 1 cut(s) 397
EcoRII CCWGG 1 cut(s) 598
EcoT22I ATGCAT 1 cut(s) 351
EcoT38I GRGCYC 2 cut(s) 339, 499
FaeI CATG 6 cut(s) 247, 349, 547, 798, 884, 1045
FaqI GGGAC 1 cut(s) 956
FatI CATG 6 cut(s) 243, 345, 543, 794, 880, 1041
FauNDI CATATG 1 cut(s) 79
FbaI TGATCA 1 cut(s) 777
Fnu4HI GCNGC 4 cut(s) 329, 756, 912, 1184
FokI GGATG 3 cut(s) 162, 825, 1279
FriOI GRGCYC 2 cut(s) 339, 499
Fsp4HI GCNGC 4 cut(s) 329, 756, 912, 1184
FspBI CTAG 4 cut(s) 438, 566, 986, 1013
GlaI GCGC 2 cut(s) 1140, 1281
GluI GCNGC 4 cut(s) 329, 756, 912, 1184
GsuI CTGGAG 1 cut(s) 483
HaeIII GGCC 2 cut(s) 1131, 1271
HapII CCGG 2 cut(s) 653, 1068
HhaI GCGC 2 cut(s) 1141, 1282
Hin1II CATG 6 cut(s) 247, 349, 547, 798, 884, 1045
Hin6I GCGC 2 cut(s) 1139, 1280
HinP1I GCGC 2 cut(s) 1139, 1280
HincII GTYRAC 2 cut(s) 541, 1075
HindII GTYRAC 2 cut(s) 541, 1075
HinfI GANTC 2 cut(s) 139, 1148
HpaII CCGG 2 cut(s) 653, 1068
HphI GGTGA 3 cut(s) 44, 409, 614
Hpy166II GTNNAC 3 cut(s) 480, 541, 1075
Hpy188I TCNGA 3 cut(s) 295, 324, 1307
Hpy188III TCNNGA 9 cut(s) 371, 412, 500, 690, 761, 926, 1037, 1085, 1118
Hpy8I GTNNAC 3 cut(s) 480, 541, 1075
HpyAV CCTTC 2 cut(s) 190, 290
HpyCH4III ACNGT 4 cut(s) 359, 516, 1195, 1209
HpyCH4IV ACGT 2 cut(s) 484, 665
HpyCH4V TGCA 7 cut(s) 243, 331, 349, 449, 536, 1183, 1240
HpyF10VI GCNNNNNNNGC 7 cut(s) 334, 557, 566, 764, 827, 863, 1277
HpyF3I CTNAG 5 cut(s) 321, 384, 570, 893, 1035
HpySE526I ACGT 2 cut(s) 484, 665
Hsp92II CATG 6 cut(s) 247, 349, 547, 798, 884, 1045
HspAI GCGC 2 cut(s) 1139, 1280
Ksp22I TGATCA 1 cut(s) 777
Kzo9I GATC 5 cut(s) 247, 616, 777, 799, 1081
LguI GCTCTTC 2 cut(s) 18, 165
LmnI GCTCC 5 cut(s) 502, 557, 763, 1009, 1026
Lsp1109I GCAGC 3 cut(s) 315, 742, 1195
LweI GCATC 2 cut(s) 315, 458
MaeI CTAG 4 cut(s) 438, 566, 986, 1013
MaeII ACGT 2 cut(s) 484, 665
MaeIII GTNAC 2 cut(s) 397, 707
MalI GATC 5 cut(s) 249, 618, 779, 801, 1083
MboI GATC 5 cut(s) 247, 616, 777, 799, 1081
MboII GAAGA 7 cut(s) 35, 112, 118, 140, 152, 510, 974
MflI RGATCY 1 cut(s) 799
MhlI GDGCHC 3 cut(s) 339, 499, 1006
MluCI AATT 7 cut(s) 67, 388, 417, 620, 693, 732, 1051
MmeI TCCRAC 3 cut(s) 535, 1177, 1233
MnlI CCTC 6 cut(s) 189, 468, 820, 888, 1142, 1212
Mph1103I ATGCAT 1 cut(s) 351
MroXI GAANNNNTTC 1 cut(s) 969
MseI TTAA 4 cut(s) 96, 153, 584, 948
MspI CCGG 2 cut(s) 653, 1068
MspR9I CCNGG 3 cut(s) 600, 1068, 1069
MvaI CCWGG 1 cut(s) 600
MvnI CGCG 1 cut(s) 1139
MwoI GCNNNNNNNGC 7 cut(s) 334, 557, 566, 764, 827, 863, 1277
NciI CCSGG 2 cut(s) 1068, 1069
NdeI CATATG 1 cut(s) 79
NdeII GATC 5 cut(s) 247, 616, 777, 799, 1081
NlaIII CATG 6 cut(s) 247, 349, 547, 798, 884, 1045
NlaIV GGNNCC 1 cut(s) 801
NmuCI GTSAC 2 cut(s) 397, 707
NsiI ATGCAT 1 cut(s) 351
NspI RCATGY 2 cut(s) 349, 547
PciI ACATGT 1 cut(s) 543
PciSI GCTCTTC 2 cut(s) 18, 165
PcsI WCGNNNNNNNCGW 1 cut(s) 490
PdmI GAANNNNTTC 1 cut(s) 969
PfeI GAWTC 2 cut(s) 139, 1148
PflMI CCANNNNNTGG 1 cut(s) 486
PkrI GCNGC 4 cut(s) 330, 757, 913, 1185
PscI ACATGT 1 cut(s) 543
Psp124BI GAGCTC 1 cut(s) 499
Psp6I CCWGG 1 cut(s) 598
PspEI GGTNACC 1 cut(s) 397
PspGI CCWGG 1 cut(s) 598
PspN4I GGNNCC 1 cut(s) 801
PspPI GGNCC 3 cut(s) 660, 1199, 1255
PstI CTGCAG 1 cut(s) 538
PstNI CAGNNNCTG 1 cut(s) 328
PsuI RGATCY 1 cut(s) 799
RsaI GTAC 2 cut(s) 40, 260
RsaNI GTAC 2 cut(s) 39, 259
SacI GAGCTC 1 cut(s) 499
SapI GCTCTTC 2 cut(s) 18, 165
SaqAI TTAA 4 cut(s) 96, 153, 584, 948
SatI GCNGC 4 cut(s) 329, 756, 912, 1184
Sau3AI GATC 5 cut(s) 247, 616, 777, 799, 1081
Sau96I GGNCC 3 cut(s) 660, 1199, 1255
ScrFI CCNGG 3 cut(s) 600, 1068, 1069
SduI GDGCHC 3 cut(s) 339, 499, 1006
SfaNI GCATC 2 cut(s) 315, 458
SfcI CTRYAG 2 cut(s) 512, 534
SinI GGWCC 3 cut(s) 660, 1199, 1255
SmaI CCCGGG 1 cut(s) 1069
SmlI CTYRAG 2 cut(s) 887, 926
SmoI CTYRAG 2 cut(s) 887, 926
Sse9I AATT 7 cut(s) 67, 388, 417, 620, 693, 732, 1051
SsiI CCGC 4 cut(s) 722, 911, 1024, 1258
SspMI CTAG 4 cut(s) 438, 566, 986, 1013
SstI GAGCTC 1 cut(s) 499
StyD4I CCNGG 3 cut(s) 598, 1066, 1067
TaaI ACNGT 4 cut(s) 359, 516, 1195, 1209
TaiI ACGT 2 cut(s) 487, 668
TaqI TCGA 6 cut(s) 370, 493, 691, 784, 1084, 1211
TasI AATT 7 cut(s) 67, 388, 417, 620, 693, 732, 1051
TauI GCSGC 1 cut(s) 914
TfiI GAWTC 2 cut(s) 139, 1148
Tru1I TTAA 4 cut(s) 96, 153, 584, 948
Tru9I TTAA 4 cut(s) 96, 153, 584, 948
TscAI CASTG 1 cut(s) 472
TseFI GTSAC 2 cut(s) 397, 707
TseI GCWGC 3 cut(s) 328, 755, 1183
Tsp45I GTSAC 2 cut(s) 397, 707
TspDTI ATGAA 7 cut(s) 96, 119, 220, 284, 510, 858, 1137
TspGWI ACGGA 1 cut(s) 579
TspMI CCCGGG 1 cut(s) 1067
TspRI CASTG 1 cut(s) 472
Van91I CCANNNNNTGG 1 cut(s) 486
VpaK11BI GGWCC 3 cut(s) 660, 1199, 1255
XapI RAATTY 3 cut(s) 67, 388, 1051
XceI RCATGY 2 cut(s) 349, 547
XcmI CCANNNNNNNNNTGG 1 cut(s) 1098
XmaI CCCGGG 1 cut(s) 1067
XmnI GAANNNNTTC 1 cut(s) 969
XspI CTAG 4 cut(s) 438, 566, 986, 1013
Zsp2I ATGCAT 1 cut(s) 351
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.