AT4G14290

BEST Arabidopsis thaliana protein match is

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Reverse (-)
8225294 .. 8230299
5006 bp
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UTR
Exon/CDS
Intron
AT4G14290.4

Sequence Viewer

Length: 1677 bp
ATGGAGCAGCTTGTTAACTTCGTCATTCGACCTCCAAGAGCTGAATACAATCCAGAACATGATCTCTTGGAACAAGAGTTCTTGCTTAAAGGGAGATGGTACCAGAGGAAAGATTTAGAGGTTAAAAACATCAGAGGAGATATCCTTCAGTGTAGTCATTACATGCCAGTTGAGCGTCCTGAAGATAGGCCTCTACCTTGTGTAATATACTGCCATGGCAACAGTGGATGTAGAGCTGATGCCAGTGAAGCTGCGATCGTATTACTTCCTTCAAACATCACGATTTTCACGCTTGACTTTTCGGGATCCGGTCTCTCTGGCGGGGAGCATGTCACTTTGGGTTGGAACGAAAAAGATGATCTGAAGGCTGTGGTTGAGTATTTGCGCACGGATGGGAATGTCTCCCTGATTGGCTTATGGGGTCGTTCAATGGGTGCTGTCACAAGCTTGATGTACGGAGCAGAGGATCCCTCTATCGCAGCGATGGTTCTAGACAGCCCATTCTCTGATTTGGTTGATTTGATGATGGAGCTTGTAGATACGTATAAGTTCCGACTACCGAAGTTTACTATAAAATTTGCAATACAATATATGCGGAGAGCTGTTCAGAAGAAAGCCAATTTTAACATAACGGATCTCAACACCATTAAGGTAGCGAAATCTTGTTTTGTTCCTGTTTTATTTGGACATGCCGTAGATGATGACTTTATTCAGCCTCATCACTCAGAGCGTATATATGAAGCATACATAGGAGACAAAAATATCATCAAATTCGATGGAGACCACAATTCACCACGGCCACAATTCTACTTTGATTCAATAAACATCTTTTTCCATAACGTTCTTCAACCTCCAGAGGTGGTTGGGCCAACATTTTTTGACCCGGTGGATGACTACTTTGCTAAGGGCAGTTGGAGCACCATGCAACAACTAAGTTCTCCCCCATCCTCAGCACAGAAAAGTTTAGCTCCAGGTAGCACCTCTGATGCTATAAATGAAGTCCGCTTAAAAAGACCTATGAGTCGCACAGAGGTTCCTTCCAACGACCCATCTAATCAATCGTCATCAGAAACCAAGGAAAAAGAGAGTCTTGAAGTCTCCAGTAGTTCATCTTCTGATATGATCAGTTTTGATTTGTCGAATGGAGATCCATATCCTCCTCATCTCGCAGTAGCTTTAGATGATGATCAATATGTGGAGTTTCACGTAGATGAGCTGGCAGATTTTCCATCAAATGCAGAGGAAGAAGAGAGGATGCTGATGGAAGCGGTGATGAAATCGCTGAAGGACATGGAGGTTGAACAAACTCATCAGAAAAAAGAACCTTCCAGGACCAATACAGAGACCAGTGAAGGTAATGCTGCTGCTTCTACTACAGAACCAGAACTGGCACTTTCTGATACAGATTCTGCTTCTGGTCCAACACCATGTAACCATGATGCACGATTATCTTCTGTAGCCAGTGTTCCATCTAAAACATCAGATTCTCTGCCGGGACCTGTAAATGGTTTTGTTCCTGGTGCTTCGCCTAAAACGAGTCAAAACAAAAATGATGTCATTGATTTGTCAGCACGTACAAAGGCAACAGTGACTGTGGTTGGACGTAGTAGCACATCAGGAAACGTTTTAGAGGGGTTATTACGCCGATGGGATCTTAATTTCTTCAAAAGTAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

558

Amino Acids

61.92

Weight (kDa)

4.91

Isoelectric Point (pI)

51.93

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1020
Acc16I TGCGCA 1 cut(s) 386
Acc65I GGTACC 1 cut(s) 99
AccB1I GGYRCC 1 cut(s) 99
AciI CCGC 4 cut(s) 321, 595, 1003, 1268
AclI AACGTT 2 cut(s) 840, 1623
AclWI GGATC 7 cut(s) 300, 313, 461, 474, 642, 1142, 1659
AcoI YGGCCR 1 cut(s) 797
AcsI RAATTY 2 cut(s) 575, 770
AcuI CTGAAG 4 cut(s) 131, 201, 383, 1304
AfaI GTAC 3 cut(s) 101, 455, 1576
AfiI CCNNNNNNNGG 1 cut(s) 1505
AgsI TTSAA 7 cut(s) 273, 429, 819, 848, 1094, 1301, 1666
AjnI CCWGG 3 cut(s) 970, 1328, 1516
AloI GAACNNNNNNTCC 2 cut(s) 62, 94
Alw21I GWGCWC 1 cut(s) 920
Alw26I GTCTC 6 cut(s) 317, 406, 747, 774, 1102, 1337
AlwI GGATC 7 cut(s) 300, 313, 461, 474, 642, 1142, 1659
AlwNI CAGNNNCTG 2 cut(s) 1409, 1592
AoxI GGCC 3 cut(s) 188, 797, 866
ApeKI GCWGC 5 cut(s) 7, 251, 479, 1361, 1364
ApoI RAATTY 2 cut(s) 575, 770
ArsI GACNNNNNNTTYG 2 cut(s) 1539, 1571
Asp718I GGTACC 1 cut(s) 99
AspLEI GCGC 1 cut(s) 387
AspS9I GGNCC 4 cut(s) 866, 1332, 1418, 1496
AsuC2I CCSGG 2 cut(s) 884, 1494
AsuHPI GGTGA 2 cut(s) 783, 1282
AvaII GGWCC 3 cut(s) 1332, 1418, 1496
BamHI GGATCC 2 cut(s) 305, 466
BanI GGYRCC 1 cut(s) 99
BarI GAAGNNNNNNTAC 2 cut(s) 1096, 1128
Bbv12I GWGCWC 1 cut(s) 920
BbvCI CCTCAGC 1 cut(s) 949
BbvI GCAGC 5 cut(s) 19, 238, 491, 1348, 1351
BceAI ACGGC 2 cut(s) 677, 812
BciT130I CCWGG 3 cut(s) 972, 1330, 1518
BclI TGATCA 2 cut(s) 1122, 1186
BcnI CCSGG 2 cut(s) 884, 1494
BcoDI GTCTC 6 cut(s) 317, 406, 747, 774, 1102, 1337
BfaI CTAG 1 cut(s) 491
BfmI CTRYAG 2 cut(s) 1374, 1455
BisI GCNGC 5 cut(s) 8, 252, 480, 1362, 1365
BlsI GCNGC 5 cut(s) 9, 253, 481, 1363, 1366
Bme1390I CCNGG 5 cut(s) 884, 972, 1330, 1494, 1518
Bme18I GGWCC 3 cut(s) 1332, 1418, 1496
BmgT120I GGNCC 4 cut(s) 866, 1332, 1418, 1496
BmiI GGNNCC 5 cut(s) 101, 307, 468, 1035, 1497
BmrFI CCNGG 5 cut(s) 884, 972, 1330, 1494, 1518
BmsI GCATC 4 cut(s) 229, 976, 1245, 1429
BplI GAGNNNNNCTC 2 cut(s) 455, 487
BpmI CTGGAG 3 cut(s) 837, 954, 1084
Bpu10I CCTNAGC 2 cut(s) 903, 949
BpuMI CCSGG 2 cut(s) 884, 1494
BsaAI YACGTR 3 cut(s) 543, 1207, 1574
BsaBI GATNNNNATC 2 cut(s) 1152, 1185
BsaI GGTCTC 3 cut(s) 317, 774, 1337
BsaJI CCNNGG 3 cut(s) 214, 794, 1074
BsaWI WCCGGW 1 cut(s) 308
Bsc4I CCNNNNNNNGG 1 cut(s) 1505
Bse1I ACTGG 6 cut(s) 167, 243, 1101, 1347, 1392, 1461
Bse8I GATNNNNATC 2 cut(s) 1152, 1185
BseBI CCWGG 3 cut(s) 972, 1330, 1518
BseDI CCNNGG 3 cut(s) 214, 794, 1074
BseGI GGATG 5 cut(s) 233, 397, 895, 944, 1260
BseJI GATNNNNATC 2 cut(s) 1152, 1185
BseLI CCNNNNNNNGG 1 cut(s) 1505
BseMII CTCAG 2 cut(s) 738, 963
BseNI ACTGG 6 cut(s) 167, 243, 1101, 1347, 1392, 1461
BseRI GAGGAG 2 cut(s) 150, 1149
BseXI GCAGC 5 cut(s) 19, 238, 491, 1348, 1351
Bsh1285I CGRYCG 1 cut(s) 258
BshFI GGCC 3 cut(s) 190, 799, 868
BshNI GGYRCC 1 cut(s) 99
BsiEI CGRYCG 1 cut(s) 258
BsiHKAI GWGCWC 1 cut(s) 920
BsiSI CCGG 3 cut(s) 309, 884, 1493
BslFI GGGAC 1 cut(s) 1509
BslI CCNNNNNNNGG 1 cut(s) 1505
BsmAI GTCTC 6 cut(s) 317, 406, 747, 774, 1102, 1337
BsmFI GGGAC 1 cut(s) 1509
BsnI GGCC 3 cut(s) 190, 799, 868
Bso31I GGTCTC 3 cut(s) 317, 774, 1337
Bsp1286I GDGCHC 1 cut(s) 920
Bsp19I CCATGG 1 cut(s) 214
BspACI CCGC 4 cut(s) 321, 595, 1003, 1268
BspANI GGCC 3 cut(s) 190, 799, 868
BspCNI CTCAG 2 cut(s) 737, 962
BspLI GGNNCC 5 cut(s) 101, 307, 468, 1035, 1497
BspPI GGATC 7 cut(s) 300, 313, 461, 474, 642, 1142, 1659
BspT107I GGYRCC 1 cut(s) 99
BspTNI GGTCTC 3 cut(s) 317, 774, 1337
BsrI ACTGG 6 cut(s) 167, 243, 1101, 1347, 1392, 1461
BssECI CCNNGG 3 cut(s) 214, 794, 1074
BssT1I CCWWGG 2 cut(s) 214, 1074
Bst2UI CCWGG 3 cut(s) 972, 1330, 1518
Bst4CI ACNGT 3 cut(s) 224, 1588, 1594
Bst6I CTCTTC 1 cut(s) 1242
BstBAI YACGTR 3 cut(s) 543, 1207, 1574
BstC8I GCNNGC 1 cut(s) 1218
BstDEI CTNAG 4 cut(s) 724, 903, 932, 949
BstDSI CCRYGG 2 cut(s) 214, 794
BstF5I GGATG 5 cut(s) 233, 397, 895, 944, 1260
BstHHI GCGC 1 cut(s) 387
BstMAI GTCTC 6 cut(s) 317, 406, 747, 774, 1102, 1337
BstMCI CGRYCG 1 cut(s) 258
BstMWI GCNNNNNNNGC 3 cut(s) 172, 248, 915
BstNI CCWGG 3 cut(s) 972, 1330, 1518
BstNSI RCATGY 3 cut(s) 166, 332, 692
BstSCI CCNGG 5 cut(s) 882, 970, 1328, 1492, 1516
BstSFI CTRYAG 2 cut(s) 1374, 1455
BstSNI TACGTA 1 cut(s) 543
BstV1I GCAGC 5 cut(s) 19, 238, 491, 1348, 1351
BstX2I RGATCY 5 cut(s) 305, 466, 634, 1147, 1651
BstYI RGATCY 5 cut(s) 305, 466, 634, 1147, 1651
BsuRI GGCC 3 cut(s) 190, 799, 868
BtgI CCRYGG 2 cut(s) 214, 794
BtgZI GCGATG 1 cut(s) 497
BtsCI GGATG 5 cut(s) 233, 397, 895, 944, 1260
BtsIMutI CAGTG 6 cut(s) 155, 229, 250, 1354, 1468, 1593
Cac8I GCNNGC 1 cut(s) 1218
CaiI CAGNNNCTG 2 cut(s) 1409, 1592
CfoI GCGC 1 cut(s) 387
Cfr13I GGNCC 4 cut(s) 866, 1332, 1418, 1496
CseI GACGC 1 cut(s) 164
Csp6I GTAC 3 cut(s) 100, 454, 1575
CviAII CATG 9 cut(s) 59, 163, 215, 329, 689, 922, 1291, 1428, 1436
CviQI GTAC 3 cut(s) 100, 454, 1575
DdeI CTNAG 4 cut(s) 724, 903, 932, 949
DrdI GACNNNNNNGTC 1 cut(s) 1020
DseDI GACNNNNNNGTC 1 cut(s) 1020
EaeI YGGCCR 1 cut(s) 797
Eam1104I CTCTTC 1 cut(s) 1242
EarI CTCTTC 1 cut(s) 1242
Eco105I TACGTA 1 cut(s) 543
Eco130I CCWWGG 2 cut(s) 214, 1074
Eco147I AGGCCT 1 cut(s) 190
Eco31I GGTCTC 3 cut(s) 317, 774, 1337
Eco32I GATATC 1 cut(s) 142
Eco47I GGWCC 3 cut(s) 1332, 1418, 1496
Eco57I CTGAAG 4 cut(s) 131, 201, 383, 1304
EcoO109I RGGNCCY 1 cut(s) 1496
EcoRII CCWGG 3 cut(s) 970, 1328, 1516
EcoRV GATATC 1 cut(s) 142
EcoT14I CCWWGG 2 cut(s) 214, 1074
ErhI CCWWGG 2 cut(s) 214, 1074
FaeI CATG 9 cut(s) 62, 166, 218, 332, 692, 925, 1294, 1431, 1439
FalI AAGNNNNNCTT 2 cut(s) 1074, 1106
FaqI GGGAC 1 cut(s) 1509
FatI CATG 9 cut(s) 58, 162, 214, 328, 688, 921, 1290, 1427, 1435
FauI CCCGC 1 cut(s) 314
FbaI TGATCA 2 cut(s) 1122, 1186
Fnu4HI GCNGC 5 cut(s) 8, 252, 480, 1362, 1365
FokI GGATG 5 cut(s) 240, 404, 902, 931, 1267
Fsp4HI GCNGC 5 cut(s) 8, 252, 480, 1362, 1365
FspBI CTAG 1 cut(s) 491
FspI TGCGCA 1 cut(s) 386
GlaI GCGC 1 cut(s) 386
GluI GCNGC 5 cut(s) 8, 252, 480, 1362, 1365
GsuI CTGGAG 3 cut(s) 837, 954, 1084
HaeIII GGCC 3 cut(s) 190, 799, 868
HapII CCGG 3 cut(s) 309, 884, 1493
HgaI GACGC 1 cut(s) 164
HhaI GCGC 1 cut(s) 387
Hin1II CATG 9 cut(s) 62, 166, 218, 332, 692, 925, 1294, 1431, 1439
Hin6I GCGC 1 cut(s) 385
HinP1I GCGC 1 cut(s) 385
HincII GTYRAC 1 cut(s) 16
HindII GTYRAC 1 cut(s) 16
HindIII AAGCTT 1 cut(s) 445
HinfI GANTC 6 cut(s) 815, 1021, 1087, 1406, 1484, 1537
HpaI GTTAAC 1 cut(s) 16
HpaII CCGG 3 cut(s) 309, 884, 1493
HphI GGTGA 2 cut(s) 783, 1282
Hpy166II GTNNAC 2 cut(s) 16, 567
Hpy188III TCNNGA 8 cut(s) 53, 179, 280, 303, 491, 854, 1091, 1617
Hpy8I GTNNAC 2 cut(s) 16, 567
HpyAV CCTTC 7 cut(s) 155, 279, 358, 1047, 1279, 1335, 1346
HpyCH4III ACNGT 3 cut(s) 224, 1588, 1594
HpyCH4IV ACGT 6 cut(s) 542, 840, 1206, 1573, 1603, 1623
HpyCH4V TGCA 4 cut(s) 581, 925, 1238, 1442
HpyF10VI GCNNNNNNNGC 3 cut(s) 172, 248, 915
HpyF3I CTNAG 4 cut(s) 724, 903, 932, 949
HpySE526I ACGT 6 cut(s) 542, 840, 1206, 1573, 1603, 1623
Hsp92II CATG 9 cut(s) 62, 166, 218, 332, 692, 925, 1294, 1431, 1439
HspAI GCGC 1 cut(s) 385
KpnI GGTACC 1 cut(s) 103
Ksp22I TGATCA 2 cut(s) 1122, 1186
KspAI GTTAAC 1 cut(s) 16
LmnI GCTCC 6 cut(s) 4, 325, 458, 529, 915, 973
Lsp1109I GCAGC 5 cut(s) 19, 238, 491, 1348, 1351
LweI GCATC 4 cut(s) 229, 976, 1245, 1429
MaeI CTAG 1 cut(s) 491
MaeII ACGT 6 cut(s) 542, 840, 1206, 1573, 1603, 1623
MaeIII GTNAC 4 cut(s) 331, 439, 1430, 1588
MboII GAAGA 8 cut(s) 194, 622, 836, 1104, 1256, 1259, 1443, 1654
MflI RGATCY 5 cut(s) 305, 466, 634, 1147, 1651
MhlI GDGCHC 1 cut(s) 920
MluCI AATT 6 cut(s) 575, 619, 770, 787, 803, 1657
MlyI GAGTC 3 cut(s) 1030, 1096, 1546
MmeI TCCRAC 6 cut(s) 323, 577, 893, 1065, 1445, 1579
MseI TTAA 7 cut(s) 15, 87, 123, 624, 648, 1007, 1656
MslI CAYNNNNRTG 1 cut(s) 1209
MspI CCGG 3 cut(s) 309, 884, 1493
MspR9I CCNGG 5 cut(s) 884, 972, 1330, 1494, 1518
MvaI CCWGG 3 cut(s) 972, 1330, 1518
MwoI GCNNNNNNNGC 3 cut(s) 172, 248, 915
NciI CCSGG 2 cut(s) 884, 1494
NcoI CCATGG 1 cut(s) 214
NlaIII CATG 9 cut(s) 62, 166, 218, 332, 692, 925, 1294, 1431, 1439
NlaIV GGNNCC 5 cut(s) 101, 307, 468, 1035, 1497
NmuCI GTSAC 3 cut(s) 331, 439, 1588
NsbI TGCGCA 1 cut(s) 386
NspI RCATGY 3 cut(s) 166, 332, 692
PceI AGGCCT 1 cut(s) 190
PcsI WCGNNNNNNNCGW 1 cut(s) 1532
PfeI GAWTC 3 cut(s) 815, 1406, 1484
PfoI TCCNGGA 1 cut(s) 1328
PkrI GCNGC 5 cut(s) 9, 253, 481, 1363, 1366
Ple19I CGATCG 1 cut(s) 258
PleI GAGTC 3 cut(s) 1029, 1095, 1545
PpsI GAGTC 3 cut(s) 1029, 1095, 1545
Ppu21I YACGTR 3 cut(s) 543, 1207, 1574
PpuMI RGGWCCY 1 cut(s) 1496
Psp1406I AACGTT 2 cut(s) 840, 1623
Psp5II RGGWCCY 1 cut(s) 1496
Psp6I CCWGG 3 cut(s) 970, 1328, 1516
PspGI CCWGG 3 cut(s) 970, 1328, 1516
PspN4I GGNNCC 5 cut(s) 101, 307, 468, 1035, 1497
PspPI GGNCC 4 cut(s) 866, 1332, 1418, 1496
PspPPI RGGWCCY 1 cut(s) 1496
PsrI GAACNNNNNNTAC 2 cut(s) 1449, 1481
PstNI CAGNNNCTG 2 cut(s) 1409, 1592
PsuI RGATCY 5 cut(s) 305, 466, 634, 1147, 1651
PvuI CGATCG 1 cut(s) 258
RsaI GTAC 3 cut(s) 101, 455, 1576
RsaNI GTAC 3 cut(s) 100, 454, 1575
RseI CAYNNNNRTG 1 cut(s) 1209
SaqAI TTAA 7 cut(s) 15, 87, 123, 624, 648, 1007, 1656
SatI GCNGC 5 cut(s) 8, 252, 480, 1362, 1365
Sau96I GGNCC 4 cut(s) 866, 1332, 1418, 1496
SchI GAGTC 3 cut(s) 1030, 1096, 1546
ScrFI CCNGG 5 cut(s) 884, 972, 1330, 1494, 1518
SduI GDGCHC 1 cut(s) 920
SfaNI GCATC 4 cut(s) 229, 976, 1245, 1429
SfcI CTRYAG 2 cut(s) 1374, 1455
SinI GGWCC 3 cut(s) 1332, 1418, 1496
SmiMI CAYNNNNRTG 1 cut(s) 1209
SnaBI TACGTA 1 cut(s) 543
Sse9I AATT 6 cut(s) 575, 619, 770, 787, 803, 1657
SseBI AGGCCT 1 cut(s) 190
SsiI CCGC 4 cut(s) 321, 595, 1003, 1268
SspMI CTAG 1 cut(s) 491
StuI AGGCCT 1 cut(s) 190
StyD4I CCNGG 5 cut(s) 882, 970, 1328, 1492, 1516
StyI CCWWGG 2 cut(s) 214, 1074
TaaI ACNGT 3 cut(s) 224, 1588, 1594
TaiI ACGT 6 cut(s) 545, 843, 1209, 1576, 1606, 1626
TaqI TCGA 3 cut(s) 28, 774, 1139
TasI AATT 6 cut(s) 575, 619, 770, 787, 803, 1657
TfiI GAWTC 3 cut(s) 815, 1406, 1484
Tru1I TTAA 7 cut(s) 15, 87, 123, 624, 648, 1007, 1656
Tru9I TTAA 7 cut(s) 15, 87, 123, 624, 648, 1007, 1656
TscAI CASTG 6 cut(s) 155, 229, 250, 1354, 1468, 1593
TseFI GTSAC 3 cut(s) 331, 439, 1588
TseI GCWGC 5 cut(s) 7, 251, 479, 1361, 1364
Tsp45I GTSAC 3 cut(s) 331, 439, 1588
TspDTI ATGAA 4 cut(s) 753, 1011, 1098, 1289
TspGWI ACGGA 3 cut(s) 404, 471, 647
TspRI CASTG 6 cut(s) 155, 229, 250, 1354, 1468, 1593
VpaK11BI GGWCC 3 cut(s) 1332, 1418, 1496
XapI RAATTY 2 cut(s) 575, 770
XbaI TCTAGA 1 cut(s) 490
XceI RCATGY 3 cut(s) 166, 332, 692
XcmI CCANNNNNNNNNTGG 1 cut(s) 221
XspI CTAG 1 cut(s) 491
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.