Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0014058

Physical Location & Seq

Genomic Coordinates Reverse (-)

8304442 .. 8305857

Gene Structure 1416 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G14430.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 723 bp

ATGTGTACGTTAGAGAAACGCGGCGATCTCTTCCTCCTAACCCTAACCGGAGACGGCGAACACAGATTCCACCCCGACACAATTGCCACCATTCTCTCCCTTCTCGAACAAGCCAAATCTCAATCCACCCGTGGATCCATCCTCATCACCACCGCCAACGGCAAATTCTTCTCCAACGGATTCGATCTTGCATGGGCTCAAACCGCCGGATCCAAAACCGGAGCCGCAAACCGGCTTCACCAAATGGTTGAATCATTCAAACCGGTGGTAGCAGCGCTTCTCGATCTCCCTATGCCGACGATCGCCGCCTTGAACGGCCACGCCGCCGCCGCGGGATTGATTTTGGCTTTGAGCCATGATTACGTGTTCATGAGGAAAGATCGTGGGGTTCTGTATATGAGTGAAGTTGACATCGGGCTTTCGATGCCGGATTATTTCTCGGCGTTGGTTAGGGCTAAGATCGGGACGAGTGCGGCGAGGAGAGAGCTGTTGTTGAGTGGGAAGAAGATTAGAGGAGAAGAAGCGGTGGGTTTGGGGATTGTTGACTCGGCCGCGTATGATAGTGAGGAAGGTGTTGTTGTGGCTAGTGTGCGCCTTGGTGAGAAATTGGCGGCGAAGAAATGGAGCGGTGAGGTTTATGCGTCGATAAGGAAGAGTTTGTATCCGGAGCTTTGTGGGATTCTTGGTTTAGAGACTAGAGTGTTTGCAACACCTAAGCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0003824 GO:0004165 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005777 GO:0005829 GO:0006082 GO:0006629 GO:0006631 GO:0006725 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009062 GO:0009628 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009850 GO:0009888 GO:0009987 GO:0010015 GO:0010033 GO:0010053 GO:0010054 GO:0010243 GO:0010817 GO:0014070 GO:0016042 GO:0016049 GO:0016054 GO:0016853 GO:0016860 GO:0016863 GO:0019752 GO:0021700 GO:0022622 GO:0030154 GO:0032501 GO:0032502 GO:0032787 GO:0034641 GO:0040007 GO:0042221 GO:0042430 GO:0042445 GO:0042579 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044242 GO:0044248 GO:0044255 GO:0044281 GO:0044282 GO:0044424 GO:0044444 GO:0044464 GO:0046395 GO:0046483 GO:0048364 GO:0048468 GO:0048469 GO:0048588 GO:0048589 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0050896 GO:0060560 GO:0065007 GO:0065008 GO:0071695 GO:0071704 GO:0072329 GO:0080024 GO:0080026 GO:0080147 GO:0080167 GO:0090558 GO:0090627 GO:0099402 GO:1901360 GO:1901564 GO:1901575 GO:1901698 GO:1901700 GO:1905392

KEGG Pathways

Metabolic & Signaling

ko00062 ko01110 ko04626 map00062 map01110 map04626

Pfam Domains

Protein Families

ECH_1

Protein Analysis

240

Amino Acids

25.77

Weight (kDa)

8.48

Isoelectric Point (pI)

25.82

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ECH_1	PF00378	25 - 207	3.4e-22	Enoyl-CoA hydratase/isomerase
ECH_2	PF16113	26 - 188	1.1e-08	Enoyl-CoA hydratase/isomerase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0014058)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G14430 AT4G14440
fragaria_vesca	FvH4_4g03200
malus_domestica	MD13G1210400.v1.1
prunus_persica	Prupe.1G034900_v2.0.a1
pyrus_communis	pycom13g18290
rosa_chinensis	RchiOBHm_Chr4g0391851
rosa_laevigata	RLG00000009854
rosa_multiflora	Rmu_sc0000383.1_g000017 Rmu_sc0007693.1_g000007
rosa_roxburghii	Rroxscaffold_5G00337180
rosa_rugosa	Rorug03G0336500
rosa_samantha	Rh4AG038900 Rh4BG033500 Rh4CG041500 Rh4DG036400
rosa_wichuraiana	Rw4G003030

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccBSI	CCGCTC	1 cut(s)	627
AccII	CGCG	3 cut(s)	21, 332, 554
AccIII	TCCGGA	1 cut(s)	664
AclWI	GGATC	4 cut(s)	129, 142, 204, 217
AcoI	YGGCCR	2 cut(s)	316, 549
AcsI	RAATTY	1 cut(s)	164
AfaI	GTAC	1 cut(s)	7
AfeI	AGCGCT	1 cut(s)	276
AfiI	CCNNNNNNNGG	1 cut(s)	231
AflIII	ACRYGT	1 cut(s)	363
AgeI	ACCGGT	1 cut(s)	262
AgsI	TTSAA	3 cut(s)	251, 259, 313
AjuI	GAANNNNNNNTTGG	2 cut(s)	149, 181
AloI	GAACNNNNNNTCC	2 cut(s)	51, 83
AluBI	AGCT	3 cut(s)	487, 670, 718
AluI	AGCT	3 cut(s)	487, 670, 718
Alw26I	GTCTC	2 cut(s)	45, 686
AlwI	GGATC	4 cut(s)	129, 142, 204, 217
Aor13HI	TCCGGA	1 cut(s)	664
Aor51HI	AGCGCT	1 cut(s)	276
AoxI	GGCC	2 cut(s)	316, 549
ApeKI	GCWGC	1 cut(s)	272
ApoI	RAATTY	1 cut(s)	164
AsiGI	ACCGGT	1 cut(s)	262
AspLEI	GCGC	2 cut(s)	277, 594
AsuHPI	GGTGA	4 cut(s)	139, 230, 611, 641
BamHI	GGATCC	2 cut(s)	134, 209
BanII	GRGCYC	1 cut(s)	199
BarI	GAAGNNNNNNTAC	2 cut(s)	261, 293
BbvI	GCAGC	1 cut(s)	284
BccI	CCATC	1 cut(s)	146
BceAI	ACGGC	3 cut(s)	70, 175, 331
BcgI	CGANNNNNNTGC	2 cut(s)	65, 99
BciVI	GTATCC	1 cut(s)	672
BcoDI	GTCTC	2 cut(s)	45, 686
BfaI	CTAG	2 cut(s)	585, 696
BfoI	RGCGCY	1 cut(s)	278
BfuI	GTATCC	1 cut(s)	672
BmiI	GGNNCC	3 cut(s)	136, 211, 223
BmsI	GCATC	1 cut(s)	414
Bpu10I	CCTNAGC	1 cut(s)	714
BsaAI	YACGTR	1 cut(s)	364
BsaJI	CCNNGG	3 cut(s)	130, 330, 595
BsaWI	WCCGGW	4 cut(s)	47, 218, 262, 664
Bsc4I	CCNNNNNNNGG	1 cut(s)	231
Bse118I	RCCGGY	2 cut(s)	231, 262
BseAI	TCCGGA	1 cut(s)	664
BseDI	CCNNGG	3 cut(s)	130, 330, 595
BseGI	GGATG	1 cut(s)	138
BseLI	CCNNNNNNNGG	1 cut(s)	231
BseRI	GAGGAG	2 cut(s)	493, 528
BseX3I	CGGCCG	1 cut(s)	549
BseXI	GCAGC	1 cut(s)	284
Bsh1236I	CGCG	3 cut(s)	21, 332, 554
Bsh1285I	CGRYCG	2 cut(s)	303, 552
BshFI	GGCC	2 cut(s)	318, 551
BshTI	ACCGGT	1 cut(s)	262
BsiEI	CGRYCG	2 cut(s)	303, 552
BsiSI	CCGG	7 cut(s)	48, 207, 219, 232, 263, 428, 665
BslFI	GGGAC	1 cut(s)	478
BslI	CCNNNNNNNGG	1 cut(s)	231
BsmAI	GTCTC	2 cut(s)	45, 686
BsmBI	CGTCTC	1 cut(s)	45
BsmFI	GGGAC	1 cut(s)	478
BsnI	GGCC	2 cut(s)	318, 551
Bsp1286I	GDGCHC	1 cut(s)	199
Bsp13I	TCCGGA	1 cut(s)	664
Bsp143I	GATC	8 cut(s)	25, 134, 184, 209, 283, 300, 379, 459
BspANI	GGCC	2 cut(s)	318, 551
BspEI	TCCGGA	1 cut(s)	664
BspFNI	CGCG	3 cut(s)	21, 332, 554
BspHI	TCATGA	1 cut(s)	369
BspLI	GGNNCC	3 cut(s)	136, 211, 223
BspPI	GGATC	4 cut(s)	129, 142, 204, 217
BsrBI	CCGCTC	1 cut(s)	627
BsrFI	RCCGGY	2 cut(s)	231, 262
BssAI	RCCGGY	2 cut(s)	231, 262
BssECI	CCNNGG	3 cut(s)	130, 330, 595
BssMI	GATC	8 cut(s)	25, 134, 184, 209, 283, 300, 379, 459
BssT1I	CCWWGG	1 cut(s)	595
Bst6I	CTCTTC	2 cut(s)	35, 647
BstBAI	YACGTR	1 cut(s)	364
BstDEI	CTNAG	2 cut(s)	456, 714
BstDSI	CCRYGG	2 cut(s)	130, 330
BstF5I	GGATG	1 cut(s)	138
BstFNI	CGCG	3 cut(s)	21, 332, 554
BstH2I	RGCGCY	1 cut(s)	278
BstHHI	GCGC	2 cut(s)	277, 594
BstKTI	GATC	8 cut(s)	28, 137, 187, 212, 286, 303, 382, 462
BstMAI	GTCTC	2 cut(s)	45, 686
BstMBI	GATC	8 cut(s)	25, 134, 184, 209, 283, 300, 379, 459
BstMCI	CGRYCG	2 cut(s)	303, 552
BstMWI	GCNNNNNNNGC	3 cut(s)	203, 329, 424
BstUI	CGCG	3 cut(s)	21, 332, 554
BstV1I	GCAGC	1 cut(s)	284
BstX2I	RGATCY	2 cut(s)	134, 209
BstYI	RGATCY	2 cut(s)	134, 209
BstZI	CGGCCG	1 cut(s)	549
BsuI	GTATCC	1 cut(s)	672
BsuRI	GGCC	2 cut(s)	318, 551
BtgI	CCRYGG	2 cut(s)	130, 330
BtsCI	GGATG	1 cut(s)	138
CciI	TCATGA	1 cut(s)	369
CfoI	GCGC	2 cut(s)	277, 594
Cfr10I	RCCGGY	2 cut(s)	231, 262
Cfr42I	CCGCGG	1 cut(s)	333
CseI	GACGC	1 cut(s)	630
Csp6I	GTAC	1 cut(s)	6
CspAI	ACCGGT	1 cut(s)	262
CviAII	CATG	3 cut(s)	192, 356, 370
CviQI	GTAC	1 cut(s)	6
DdeI	CTNAG	2 cut(s)	456, 714
DpnI	GATC	8 cut(s)	27, 136, 186, 211, 285, 302, 381, 461
DpnII	GATC	8 cut(s)	25, 134, 184, 209, 283, 300, 379, 459
EaeI	YGGCCR	2 cut(s)	316, 549
EagI	CGGCCG	1 cut(s)	549
Eam1104I	CTCTTC	2 cut(s)	35, 647
EarI	CTCTTC	2 cut(s)	35, 647
EclXI	CGGCCG	1 cut(s)	549
Eco130I	CCWWGG	1 cut(s)	595
Eco24I	GRGCYC	1 cut(s)	199
Eco47III	AGCGCT	1 cut(s)	276
Eco52I	CGGCCG	1 cut(s)	549
EcoT14I	CCWWGG	1 cut(s)	595
EcoT38I	GRGCYC	1 cut(s)	199
ErhI	CCWWGG	1 cut(s)	595
Esp3I	CGTCTC	1 cut(s)	45
FaeI	CATG	3 cut(s)	195, 359, 373
FaiI	YATR	8 cut(s)	193, 293, 357, 371, 396, 398, 558, 639
FaqI	GGGAC	1 cut(s)	478
FatI	CATG	3 cut(s)	191, 355, 369
FauI	CCCGC	1 cut(s)	325
FokI	GGATG	1 cut(s)	125
FriOI	GRGCYC	1 cut(s)	199
FspBI	CTAG	2 cut(s)	585, 696
GlaI	GCGC	2 cut(s)	276, 593
HaeII	RGCGCY	1 cut(s)	278
HaeIII	GGCC	2 cut(s)	318, 551
HapII	CCGG	7 cut(s)	48, 207, 219, 232, 263, 428, 665
HgaI	GACGC	1 cut(s)	630
HhaI	GCGC	2 cut(s)	277, 594
Hin1II	CATG	3 cut(s)	195, 359, 373
Hin6I	GCGC	2 cut(s)	275, 592
HinP1I	GCGC	2 cut(s)	275, 592
HincII	GTYRAC	2 cut(s)	409, 544
HindII	GTYRAC	2 cut(s)	409, 544
HinfI	GANTC	5 cut(s)	66, 180, 251, 545, 679
HpaII	CCGG	7 cut(s)	48, 207, 219, 232, 263, 428, 665
HphI	GGTGA	4 cut(s)	139, 230, 611, 641
Hpy166II	GTNNAC	3 cut(s)	6, 409, 544
Hpy188III	TCNNGA	5 cut(s)	104, 281, 370, 463, 665
Hpy8I	GTNNAC	3 cut(s)	6, 409, 544
Hpy99I	CGWCG	2 cut(s)	301, 646
HpyAV	CCTTC	2 cut(s)	110, 563
HpyCH4IV	ACGT	2 cut(s)	8, 363
HpyCH4V	TGCA	2 cut(s)	191, 707
HpyF10VI	GCNNNNNNNGC	3 cut(s)	203, 329, 424
HpyF3I	CTNAG	2 cut(s)	456, 714
HpySE526I	ACGT	2 cut(s)	8, 363
Hsp92II	CATG	3 cut(s)	195, 359, 373
HspAI	GCGC	2 cut(s)	275, 592
Kpn2I	TCCGGA	1 cut(s)	664
KspI	CCGCGG	1 cut(s)	333
Kzo9I	GATC	8 cut(s)	25, 134, 184, 209, 283, 300, 379, 459
LmnI	GCTCC	3 cut(s)	221, 624, 667
LpnPI	CCDG	7 cut(s)	61, 220, 232, 245, 276, 441, 678
Lsp1109I	GCAGC	1 cut(s)	284
LweI	GCATC	1 cut(s)	414
MaeI	CTAG	2 cut(s)	585, 696
MaeII	ACGT	2 cut(s)	8, 363
MalI	GATC	8 cut(s)	27, 136, 186, 211, 285, 302, 381, 461
MbiI	CCGCTC	1 cut(s)	627
MboI	GATC	8 cut(s)	25, 134, 184, 209, 283, 300, 379, 459
MboII	GAAGA	7 cut(s)	22, 160, 514, 517, 530, 628, 664
MfeI	CAATTG	1 cut(s)	81
MflI	RGATCY	2 cut(s)	134, 209
MhlI	GDGCHC	1 cut(s)	199
MluCI	AATT	3 cut(s)	81, 164, 605
MlyI	GAGTC	1 cut(s)	539
MmeI	TCCRAC	1 cut(s)	198
MnlI	CCTC	7 cut(s)	44, 152, 366, 471, 506, 559, 625
MroI	TCCGGA	1 cut(s)	664
MspA1I	CMGCKG	1 cut(s)	332
MspI	CCGG	7 cut(s)	48, 207, 219, 232, 263, 428, 665
MunI	CAATTG	1 cut(s)	81
MvnI	CGCG	3 cut(s)	21, 332, 554
MwoI	GCNNNNNNNGC	3 cut(s)	203, 329, 424
NdeII	GATC	8 cut(s)	25, 134, 184, 209, 283, 300, 379, 459
NlaIII	CATG	3 cut(s)	195, 359, 373
NlaIV	GGNNCC	3 cut(s)	136, 211, 223
NmeAIII	GCCGAG	2 cut(s)	419, 527
PagI	TCATGA	1 cut(s)	369
PcsI	WCGNNNNNNNCGW	1 cut(s)	473
PfeI	GAWTC	4 cut(s)	66, 180, 251, 679
PinAI	ACCGGT	1 cut(s)	262
Ple19I	CGATCG	1 cut(s)	303
PleI	GAGTC	1 cut(s)	539
PpsI	GAGTC	1 cut(s)	539
Ppu21I	YACGTR	1 cut(s)	364
PspN4I	GGNNCC	3 cut(s)	136, 211, 223
PsuI	RGATCY	2 cut(s)	134, 209
PvuI	CGATCG	1 cut(s)	303
RsaI	GTAC	1 cut(s)	7
RsaNI	GTAC	1 cut(s)	6
SacII	CCGCGG	1 cut(s)	333
Sau3AI	GATC	8 cut(s)	25, 134, 184, 209, 283, 300, 379, 459
SchI	GAGTC	1 cut(s)	539
SduI	GDGCHC	1 cut(s)	199
SetI	ASST	8 cut(s)	11, 366, 489, 574, 636, 672, 715, 720
SfaNI	GCATC	1 cut(s)	414
Sfr303I	CCGCGG	1 cut(s)	333
SgrBI	CCGCGG	1 cut(s)	333
Sse9I	AATT	3 cut(s)	81, 164, 605
SspMI	CTAG	2 cut(s)	585, 696
StyI	CCWWGG	1 cut(s)	595
TaiI	ACGT	2 cut(s)	11, 366
TaqI	TCGA	5 cut(s)	105, 183, 282, 422, 644
TasI	AATT	3 cut(s)	81, 164, 605
TauI	GCSGC	9 cut(s)	24, 227, 308, 326, 329, 332, 476, 554, 614
TfiI	GAWTC	4 cut(s)	66, 180, 251, 679
TseI	GCWGC	1 cut(s)	272
TspDTI	ATGAA	1 cut(s)	358
TspGWI	ACGGA	1 cut(s)	192
XapI	RAATTY	1 cut(s)	164
XspI	CTAG	2 cut(s)	585, 696

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.