Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0009574

Physical Location & Seq

Genomic Coordinates Reverse (-)

8462437 .. 8464485

Gene Structure 2049 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G14746.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 639 bp

ATGGCTCGTCTTAGGAACACACTCTGTCTTGTTGCTGCTTTACTTCTGATCAACCAGAAGACAGCTACTTCCGATTTCCTTTCTCCTCTTTTCGCTCCTGTGTATGATAATATATGCAAGGAAGTGGAATGTGGGAAAGGGAAATGCAAAGCACCTTCAAACACAACTTTTATGTATGAATGTGAGTGTGAAGACGGTTGGAAGCAGTTTGATCAACACCTCAAGTTTCTCCCTTGCATCACCCCCAACTGTACCTTTGATCTAACATGTGGTGAAGCAGCTTCTCCAGCACAACCCAAACCGCCTCCCAAAGACAACATTACTTCATTTTTCGACCCTTGTCAATGGATGGACTGTGGAGGAGGGCTTTGCAACAGTTCAATGCCGTTTCAATACAGCTGCAATTGCCGTGAAGGTTACAGCAATCTCATGAACATAACCACATTTCCTTGCTTGAAGCAATGTGCACTTGGAATGGACTGTTTGAATCTTGGGATTCCTTTGTCAAACTCATCATCGTCTTCTCCACCTGCTCTGCCTGATAGCAGCAAGAATCAAGGATTAAATCTAAGAGGATCATCGTTGTGGTGGATAACATTATGTGTCTCTTTAGCGCCATGGAGGATACTCTTCATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

No domains found.

Protein Analysis

212

Amino Acids

23.35

Weight (kDa)

5.81

Isoelectric Point (pI)

63.87

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0009574)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G14746 AT4G14746
fragaria_vesca	FvH4_4g00650 FvH4_4g00650 FvH4_4g00650 FvH4_4g00650 FvH4_4g01001
malus_domestica	MD13G1198400.v1.1 MD16G1198500.v1.1
prunus_persica	Prupe.1G020200_v2.0.a1
pyrus_communis	pycom13g17230 pycom16g16740
rosa_chinensis	RchiOBHm_Chr4g0387581
rosa_laevigata	RLG00000010110
rosa_multiflora	Rmu_sc0007248.1_g000007
rosa_roxburghii	Rroxscaffold_5G00334270
rosa_rugosa	Rorug03G0310800
rosa_samantha	Rh4AG016900 Rh4BG011700 Rh4CG018000 Rh4DG012600
rosa_wichuraiana	Rw4G001070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	538
Acc36I	ACCTGC	1 cut(s)	538
AciI	CCGC	1 cut(s)	302
AclWI	GGATC	1 cut(s)	583
AfaI	GTAC	1 cut(s)	253
AflIII	ACRYGT	1 cut(s)	266
AgsI	TTSAA	5 cut(s)	159, 381, 392, 457, 487
AluBI	AGCT	3 cut(s)	65, 281, 399
AluI	AGCT	3 cut(s)	65, 281, 399
Alw21I	GWGCWC	1 cut(s)	469
Alw26I	GTCTC	1 cut(s)	610
Alw44I	GTGCAC	1 cut(s)	465
AlwI	GGATC	1 cut(s)	583
ApaLI	GTGCAC	1 cut(s)	465
ApeKI	GCWGC	4 cut(s)	35, 278, 399, 546
AspLEI	GCGC	1 cut(s)	616
AsuHPI	GGTGA	2 cut(s)	232, 284
BaeGI	GKGCMC	1 cut(s)	469
BbsI	GAAGAC	3 cut(s)	65, 198, 513
Bbv12I	GWGCWC	1 cut(s)	469
BbvI	GCAGC	4 cut(s)	22, 290, 386, 558
BccI	CCATC	1 cut(s)	343
BceAI	ACGGC	2 cut(s)	370, 393
BciVI	GTATCC	1 cut(s)	618
BclI	TGATCA	2 cut(s)	48, 211
BcoDI	GTCTC	1 cut(s)	610
BfoI	RGCGCY	1 cut(s)	617
BfuAI	ACCTGC	1 cut(s)	538
BfuI	GTATCC	1 cut(s)	618
BisI	GCNGC	4 cut(s)	36, 279, 400, 547
BlsI	GCNGC	4 cut(s)	37, 280, 401, 548
BmsI	GCATC	1 cut(s)	246
BoxI	GACNNNNGTC	1 cut(s)	339
BpiI	GAAGAC	3 cut(s)	65, 198, 513
BpmI	CTGGAG	1 cut(s)	270
BpuEI	CTTGAG	1 cut(s)	206
BsaJI	CCNNGG	1 cut(s)	617
Bse3DI	GCAATG	1 cut(s)	467
BseDI	CCNNGG	1 cut(s)	617
BseGI	GGATG	1 cut(s)	354
BseMI	GCAATG	1 cut(s)	467
BseRI	GAGGAG	2 cut(s)	75, 375
BseSI	GKGCMC	1 cut(s)	469
BseXI	GCAGC	4 cut(s)	22, 290, 386, 558
BsiHKAI	GWGCWC	1 cut(s)	469
BsmAI	GTCTC	1 cut(s)	610
Bsp1286I	GDGCHC	1 cut(s)	469
Bsp143I	GATC	4 cut(s)	48, 211, 259, 575
Bsp19I	CCATGG	1 cut(s)	617
BspACI	CCGC	1 cut(s)	302
BspHI	TCATGA	1 cut(s)	429
BspMI	ACCTGC	1 cut(s)	538
BspPI	GGATC	1 cut(s)	583
BsrDI	GCAATG	1 cut(s)	467
BssECI	CCNNGG	1 cut(s)	617
BssMI	GATC	4 cut(s)	48, 211, 259, 575
BssT1I	CCWWGG	1 cut(s)	617
Bst4CI	ACNGT	5 cut(s)	197, 251, 356, 377, 482
Bst6I	CTCTTC	1 cut(s)	635
BstDEI	CTNAG	2 cut(s)	11, 569
BstDSI	CCRYGG	1 cut(s)	617
BstF5I	GGATG	1 cut(s)	354
BstH2I	RGCGCY	1 cut(s)	617
BstHHI	GCGC	1 cut(s)	616
BstKTI	GATC	4 cut(s)	51, 214, 262, 578
BstMAI	GTCTC	1 cut(s)	610
BstMBI	GATC	4 cut(s)	48, 211, 259, 575
BstMWI	GCNNNNNNNGC	2 cut(s)	287, 405
BstNSI	RCATGY	1 cut(s)	270
BstPAI	GACNNNNGTC	1 cut(s)	339
BstSLI	GKGCMC	1 cut(s)	469
BstV1I	GCAGC	4 cut(s)	22, 290, 386, 558
BstV2I	GAAGAC	3 cut(s)	65, 198, 513
BsuI	GTATCC	1 cut(s)	618
BtgI	CCRYGG	1 cut(s)	617
BtsCI	GGATG	1 cut(s)	354
BveI	ACCTGC	1 cut(s)	538
CciI	TCATGA	1 cut(s)	429
CfoI	GCGC	1 cut(s)	616
Csp6I	GTAC	1 cut(s)	252
CviAII	CATG	3 cut(s)	267, 430, 618
CviJI	RGCY	5 cut(s)	5, 65, 281, 367, 399
CviKI_1	RGCY	5 cut(s)	5, 65, 281, 367, 399
CviQI	GTAC	1 cut(s)	252
DdeI	CTNAG	2 cut(s)	11, 569
DpnI	GATC	4 cut(s)	50, 213, 261, 577
DpnII	GATC	4 cut(s)	48, 211, 259, 575
Eam1104I	CTCTTC	1 cut(s)	635
EarI	CTCTTC	1 cut(s)	635
Eco130I	CCWWGG	1 cut(s)	617
EcoT14I	CCWWGG	1 cut(s)	617
ErhI	CCWWGG	1 cut(s)	617
FaeI	CATG	3 cut(s)	270, 433, 621
FatI	CATG	3 cut(s)	266, 429, 617
FbaI	TGATCA	2 cut(s)	48, 211
Fnu4HI	GCNGC	4 cut(s)	36, 279, 400, 547
FokI	GGATG	1 cut(s)	361
Fsp4HI	GCNGC	4 cut(s)	36, 279, 400, 547
GlaI	GCGC	1 cut(s)	615
GluI	GCNGC	4 cut(s)	36, 279, 400, 547
GsuI	CTGGAG	1 cut(s)	270
HaeII	RGCGCY	1 cut(s)	617
HhaI	GCGC	1 cut(s)	616
Hin1II	CATG	3 cut(s)	270, 433, 621
Hin6I	GCGC	1 cut(s)	614
HinP1I	GCGC	1 cut(s)	614
HinfI	GANTC	3 cut(s)	487, 496, 553
HphI	GGTGA	2 cut(s)	232, 284
Hpy166II	GTNNAC	1 cut(s)	467
Hpy188I	TCNGA	2 cut(s)	48, 73
Hpy188III	TCNNGA	1 cut(s)	430
Hpy8I	GTNNAC	1 cut(s)	467
HpyAV	CCTTC	2 cut(s)	165, 407
HpyCH4III	ACNGT	5 cut(s)	197, 251, 356, 377, 482
HpyCH4V	TGCA	6 cut(s)	117, 147, 237, 372, 402, 467
HpyF10VI	GCNNNNNNNGC	2 cut(s)	287, 405
HpyF3I	CTNAG	2 cut(s)	11, 569
Hsp92II	CATG	3 cut(s)	270, 433, 621
HspAI	GCGC	1 cut(s)	614
Ksp22I	TGATCA	2 cut(s)	48, 211
Kzo9I	GATC	4 cut(s)	48, 211, 259, 575
LmnI	GCTCC	1 cut(s)	100
LpnPI	CCDG	5 cut(s)	68, 111, 300, 543, 552
Lsp1109I	GCAGC	4 cut(s)	22, 290, 386, 558
LweI	GCATC	1 cut(s)	246
MaeIII	GTNAC	1 cut(s)	416
MalI	GATC	4 cut(s)	50, 213, 261, 577
MboI	GATC	4 cut(s)	48, 211, 259, 575
MboII	GAAGA	4 cut(s)	70, 203, 513, 622
MfeI	CAATTG	1 cut(s)	403
MhlI	GDGCHC	1 cut(s)	469
MluCI	AATT	1 cut(s)	403
MmeI	TCCRAC	1 cut(s)	179
MnlI	CCTC	7 cut(s)	96, 230, 315, 353, 356, 566, 615
MseI	TTAA	1 cut(s)	563
MslI	CAYNNNNRTG	1 cut(s)	583
MspA1I	CMGCKG	1 cut(s)	399
MunI	CAATTG	1 cut(s)	403
MwoI	GCNNNNNNNGC	2 cut(s)	287, 405
NcoI	CCATGG	1 cut(s)	617
NdeII	GATC	4 cut(s)	48, 211, 259, 575
NlaIII	CATG	3 cut(s)	270, 433, 621
NspI	RCATGY	1 cut(s)	270
PagI	TCATGA	1 cut(s)	429
PaqCI	CACCTGC	1 cut(s)	538
PciI	ACATGT	1 cut(s)	266
PfeI	GAWTC	3 cut(s)	487, 496, 553
PkrI	GCNGC	4 cut(s)	37, 280, 401, 548
PscI	ACATGT	1 cut(s)	266
PshAI	GACNNNNGTC	1 cut(s)	339
PvuII	CAGCTG	1 cut(s)	399
RsaI	GTAC	1 cut(s)	253
RsaNI	GTAC	1 cut(s)	252
RseI	CAYNNNNRTG	1 cut(s)	583
SaqAI	TTAA	1 cut(s)	563
SatI	GCNGC	4 cut(s)	36, 279, 400, 547
Sau3AI	GATC	4 cut(s)	48, 211, 259, 575
SduI	GDGCHC	1 cut(s)	469
SetI	ASST	8 cut(s)	67, 157, 222, 257, 283, 401, 418, 532
SfaNI	GCATC	1 cut(s)	246
SmiMI	CAYNNNNRTG	1 cut(s)	583
SmlI	CTYRAG	1 cut(s)	221
SmoI	CTYRAG	1 cut(s)	221
Sse9I	AATT	1 cut(s)	403
SsiI	CCGC	1 cut(s)	302
StyI	CCWWGG	1 cut(s)	617
TaaI	ACNGT	5 cut(s)	197, 251, 356, 377, 482
TaqI	TCGA	1 cut(s)	333
TasI	AATT	1 cut(s)	403
TfiI	GAWTC	3 cut(s)	487, 496, 553
Tru1I	TTAA	1 cut(s)	563
Tru9I	TTAA	1 cut(s)	563
TseI	GCWGC	4 cut(s)	35, 278, 399, 546
TspDTI	ATGAA	4 cut(s)	192, 315, 446, 622
VneI	GTGCAC	1 cut(s)	465
XceI	RCATGY	1 cut(s)	270

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.