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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G14746 AT4G14746 |
| fragaria_vesca | FvH4_4g00650 FvH4_4g00650 FvH4_4g00650 FvH4_4g00650 FvH4_4g01001 |
| malus_domestica | MD13G1198400.v1.1 MD16G1198500.v1.1 |
| prunus_persica | Prupe.1G020200_v2.0.a1 |
| pyrus_communis | pycom13g17230 pycom16g16740 |
| rosa_chinensis | RchiOBHm_Chr4g0387581 |
| rosa_laevigata | RLG00000010110 |
| rosa_multiflora | Rmu_sc0007248.1_g000007 |
| rosa_roxburghii | Rroxscaffold_5G00334270 |
| rosa_rugosa | Rorug03G0310800 |
| rosa_samantha | Rh4AG016900 Rh4BG011700 Rh4CG018000 Rh4DG012600 |
| rosa_wichuraiana | Rw4G001070 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 725 |
| AccII | CGCG | 1 cut(s) | 120 |
| AciI | CCGC | 1 cut(s) | 120 |
| AclWI | GGATC | 1 cut(s) | 386 |
| AcsI | RAATTY | 1 cut(s) | 437 |
| AdeI | CACNNNGTG | 1 cut(s) | 204 |
| AfaI | GTAC | 1 cut(s) | 25 |
| AgsI | TTSAA | 6 cut(s) | 110, 284, 380, 436, 668, 711 |
| AjnI | CCWGG | 1 cut(s) | 394 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 663, 695 |
| AluBI | AGCT | 6 cut(s) | 125, 177, 491, 609, 770, 774 |
| AluI | AGCT | 6 cut(s) | 125, 177, 491, 609, 770, 774 |
| Alw26I | GTCTC | 2 cut(s) | 156, 196 |
| AlwI | GGATC | 1 cut(s) | 386 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 293 |
| ApeKI | GCWGC | 3 cut(s) | 609, 797, 824 |
| ApoI | RAATTY | 1 cut(s) | 437 |
| AspS9I | GGNCC | 1 cut(s) | 781 |
| AsuHPI | GGTGA | 2 cut(s) | 126, 726 |
| AsuNHI | GCTAGC | 1 cut(s) | 770 |
| AvaII | GGWCC | 1 cut(s) | 781 |
| BbvI | GCAGC | 3 cut(s) | 596, 784, 811 |
| BccI | CCATC | 3 cut(s) | 174, 278, 772 |
| BciT130I | CCWGG | 1 cut(s) | 396 |
| BclI | TGATCA | 1 cut(s) | 427 |
| BcoDI | GTCTC | 2 cut(s) | 156, 196 |
| BfaI | CTAG | 1 cut(s) | 771 |
| BisI | GCNGC | 3 cut(s) | 610, 798, 825 |
| BlsI | GCNGC | 3 cut(s) | 611, 799, 826 |
| Bme1390I | CCNGG | 1 cut(s) | 396 |
| Bme18I | GGWCC | 1 cut(s) | 781 |
| BmgT120I | GGNCC | 1 cut(s) | 781 |
| BmrFI | CCNGG | 1 cut(s) | 396 |
| BmtI | GCTAGC | 1 cut(s) | 774 |
| BpmI | CTGGAG | 1 cut(s) | 477 |
| BsaAI | YACGTR | 1 cut(s) | 10 |
| BsaJI | CCNNGG | 2 cut(s) | 395, 700 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 126, 156, 475, 505 |
| Bse1I | ACTGG | 1 cut(s) | 287 |
| Bse3DI | GCAATG | 1 cut(s) | 251 |
| BseBI | CCWGG | 1 cut(s) | 396 |
| BseDI | CCNNGG | 2 cut(s) | 395, 700 |
| BseGI | GGATG | 2 cut(s) | 47, 270 |
| BseMI | GCAATG | 1 cut(s) | 251 |
| BseNI | ACTGG | 1 cut(s) | 287 |
| BseXI | GCAGC | 3 cut(s) | 596, 784, 811 |
| BsgI | GTGCAG | 1 cut(s) | 466 |
| Bsh1236I | CGCG | 1 cut(s) | 120 |
| Bsh1285I | CGRYCG | 1 cut(s) | 118 |
| BsiEI | CGRYCG | 1 cut(s) | 118 |
| BslFI | GGGAC | 1 cut(s) | 124 |
| BsmAI | GTCTC | 2 cut(s) | 156, 196 |
| BsmFI | GGGAC | 1 cut(s) | 124 |
| Bsp143I | GATC | 3 cut(s) | 115, 391, 427 |
| BspACI | CCGC | 1 cut(s) | 120 |
| BspFNI | CGCG | 1 cut(s) | 120 |
| BspOI | GCTAGC | 1 cut(s) | 774 |
| BspPI | GGATC | 1 cut(s) | 386 |
| BsrDI | GCAATG | 1 cut(s) | 251 |
| BsrI | ACTGG | 1 cut(s) | 287 |
| BssECI | CCNNGG | 2 cut(s) | 395, 700 |
| BssMI | GATC | 3 cut(s) | 115, 391, 427 |
| BssT1I | CCWWGG | 1 cut(s) | 700 |
| Bst2UI | CCWGG | 1 cut(s) | 396 |
| Bst4CI | ACNGT | 3 cut(s) | 138, 626, 692 |
| BstBAI | YACGTR | 1 cut(s) | 10 |
| BstC8I | GCNNGC | 3 cut(s) | 350, 517, 772 |
| BstF5I | GGATG | 2 cut(s) | 47, 270 |
| BstFNI | CGCG | 1 cut(s) | 120 |
| BstKTI | GATC | 3 cut(s) | 118, 394, 430 |
| BstMAI | GTCTC | 2 cut(s) | 156, 196 |
| BstMBI | GATC | 3 cut(s) | 115, 391, 427 |
| BstMCI | CGRYCG | 1 cut(s) | 118 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 521 |
| BstNI | CCWGG | 1 cut(s) | 396 |
| BstSCI | CCNGG | 1 cut(s) | 394 |
| BstUI | CGCG | 1 cut(s) | 120 |
| BstV1I | GCAGC | 3 cut(s) | 596, 784, 811 |
| BtsCI | GGATG | 2 cut(s) | 47, 270 |
| BtsI | GCAGTG | 2 cut(s) | 291, 760 |
| BtsIMutI | CAGTG | 3 cut(s) | 291, 423, 760 |
| Cac8I | GCNNGC | 3 cut(s) | 350, 517, 772 |
| CaiI | CAGNNNCTG | 1 cut(s) | 293 |
| Cfr13I | GGNCC | 1 cut(s) | 781 |
| CseI | GACGC | 1 cut(s) | 439 |
| Csp6I | GTAC | 1 cut(s) | 24 |
| CviAII | CATG | 2 cut(s) | 101, 579 |
| CviQI | GTAC | 1 cut(s) | 24 |
| DpnI | GATC | 3 cut(s) | 117, 393, 429 |
| DpnII | GATC | 3 cut(s) | 115, 391, 427 |
| DraIII | CACNNNGTG | 1 cut(s) | 204 |
| Eco130I | CCWWGG | 1 cut(s) | 700 |
| Eco47I | GGWCC | 1 cut(s) | 781 |
| EcoRII | CCWGG | 1 cut(s) | 394 |
| EcoT14I | CCWWGG | 1 cut(s) | 700 |
| ErhI | CCWWGG | 1 cut(s) | 700 |
| FaeI | CATG | 2 cut(s) | 104, 582 |
| FaqI | GGGAC | 1 cut(s) | 124 |
| FatI | CATG | 2 cut(s) | 100, 578 |
| FauNDI | CATATG | 1 cut(s) | 89 |
| FbaI | TGATCA | 1 cut(s) | 427 |
| FblI | GTMKAC | 1 cut(s) | 725 |
| Fnu4HI | GCNGC | 3 cut(s) | 610, 798, 825 |
| FokI | GGATG | 2 cut(s) | 54, 257 |
| Fsp4HI | GCNGC | 3 cut(s) | 610, 798, 825 |
| FspBI | CTAG | 1 cut(s) | 771 |
| GluI | GCNGC | 3 cut(s) | 610, 798, 825 |
| GsuI | CTGGAG | 1 cut(s) | 477 |
| HgaI | GACGC | 1 cut(s) | 439 |
| Hin1II | CATG | 2 cut(s) | 104, 582 |
| HinfI | GANTC | 5 cut(s) | 530, 597, 763, 808, 832 |
| HphI | GGTGA | 2 cut(s) | 126, 726 |
| Hpy166II | GTNNAC | 2 cut(s) | 726, 790 |
| Hpy188I | TCNGA | 4 cut(s) | 196, 220, 508, 813 |
| Hpy188III | TCNNGA | 3 cut(s) | 39, 470, 594 |
| Hpy8I | GTNNAC | 2 cut(s) | 726, 790 |
| HpyAV | CCTTC | 2 cut(s) | 167, 363 |
| HpyCH4III | ACNGT | 3 cut(s) | 138, 626, 692 |
| HpyCH4IV | ACGT | 1 cut(s) | 9 |
| HpyCH4V | TGCA | 7 cut(s) | 251, 348, 483, 582, 677, 695, 800 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 521 |
| HpySE526I | ACGT | 1 cut(s) | 9 |
| Hsp92II | CATG | 2 cut(s) | 104, 582 |
| Ksp22I | TGATCA | 1 cut(s) | 427 |
| Kzo9I | GATC | 3 cut(s) | 115, 391, 427 |
| LmnI | GCTCC | 2 cut(s) | 122, 496 |
| LpnPI | CCDG | 9 cut(s) | 24, 300, 381, 408, 455, 493, 507, 735, 753 |
| Lsp1109I | GCAGC | 3 cut(s) | 596, 784, 811 |
| MaeI | CTAG | 1 cut(s) | 771 |
| MaeII | ACGT | 1 cut(s) | 9 |
| MaeIII | GTNAC | 2 cut(s) | 289, 646 |
| MalI | GATC | 3 cut(s) | 117, 393, 429 |
| MboI | GATC | 3 cut(s) | 115, 391, 427 |
| MboII | GAAGA | 7 cut(s) | 68, 222, 225, 272, 405, 629, 680 |
| MfeI | CAATTG | 2 cut(s) | 460, 678 |
| MluCI | AATT | 5 cut(s) | 105, 110, 437, 460, 678 |
| MlyI | GAGTC | 1 cut(s) | 539 |
| MnlI | CCTC | 5 cut(s) | 142, 152, 250, 452, 563 |
| MseI | TTAA | 3 cut(s) | 179, 543, 642 |
| MslI | CAYNNNNRTG | 2 cut(s) | 40, 88 |
| MspA1I | CMGCKG | 1 cut(s) | 609 |
| MspR9I | CCNGG | 1 cut(s) | 396 |
| MunI | CAATTG | 2 cut(s) | 460, 678 |
| MvaI | CCWGG | 1 cut(s) | 396 |
| MvnI | CGCG | 1 cut(s) | 120 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 521 |
| NdeI | CATATG | 1 cut(s) | 89 |
| NdeII | GATC | 3 cut(s) | 115, 391, 427 |
| NheI | GCTAGC | 1 cut(s) | 770 |
| NlaIII | CATG | 2 cut(s) | 104, 582 |
| NmuCI | GTSAC | 2 cut(s) | 289, 646 |
| PfeI | GAWTC | 4 cut(s) | 597, 763, 808, 832 |
| PkrI | GCNGC | 3 cut(s) | 611, 799, 826 |
| Ple19I | CGATCG | 1 cut(s) | 118 |
| PleI | GAGTC | 1 cut(s) | 538 |
| PpsI | GAGTC | 1 cut(s) | 538 |
| Ppu21I | YACGTR | 1 cut(s) | 10 |
| Psp6I | CCWGG | 1 cut(s) | 394 |
| PspGI | CCWGG | 1 cut(s) | 394 |
| PspPI | GGNCC | 1 cut(s) | 781 |
| PstNI | CAGNNNCTG | 1 cut(s) | 293 |
| PvuI | CGATCG | 1 cut(s) | 118 |
| PvuII | CAGCTG | 1 cut(s) | 609 |
| RsaI | GTAC | 1 cut(s) | 25 |
| RsaNI | GTAC | 1 cut(s) | 24 |
| RseI | CAYNNNNRTG | 2 cut(s) | 40, 88 |
| SaqAI | TTAA | 3 cut(s) | 179, 543, 642 |
| SatI | GCNGC | 3 cut(s) | 610, 798, 825 |
| Sau3AI | GATC | 3 cut(s) | 115, 391, 427 |
| Sau96I | GGNCC | 1 cut(s) | 781 |
| SchI | GAGTC | 1 cut(s) | 539 |
| ScrFI | CCNGG | 1 cut(s) | 396 |
| SinI | GGWCC | 1 cut(s) | 781 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 40, 88 |
| Sse9I | AATT | 5 cut(s) | 105, 110, 437, 460, 678 |
| SsiI | CCGC | 1 cut(s) | 120 |
| SspMI | CTAG | 1 cut(s) | 771 |
| StyD4I | CCNGG | 1 cut(s) | 394 |
| StyI | CCWWGG | 1 cut(s) | 700 |
| TaaI | ACNGT | 3 cut(s) | 138, 626, 692 |
| TaiI | ACGT | 1 cut(s) | 12 |
| TaqI | TCGA | 4 cut(s) | 114, 356, 716, 776 |
| TasI | AATT | 5 cut(s) | 105, 110, 437, 460, 678 |
| TfiI | GAWTC | 4 cut(s) | 597, 763, 808, 832 |
| Tru1I | TTAA | 3 cut(s) | 179, 543, 642 |
| Tru9I | TTAA | 3 cut(s) | 179, 543, 642 |
| TscAI | CASTG | 3 cut(s) | 298, 430, 760 |
| TseFI | GTSAC | 2 cut(s) | 289, 646 |
| TseI | GCWGC | 3 cut(s) | 609, 797, 824 |
| Tsp45I | GTSAC | 2 cut(s) | 289, 646 |
| TspDTI | ATGAA | 4 cut(s) | 68, 72, 76, 824 |
| TspRI | CASTG | 3 cut(s) | 298, 430, 760 |
| VpaK11BI | GGWCC | 1 cut(s) | 781 |
| XapI | RAATTY | 1 cut(s) | 437 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 466 |
| XmiI | GTMKAC | 1 cut(s) | 725 |
| XspI | CTAG | 1 cut(s) | 771 |