Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0006484

Physical Location & Seq

Genomic Coordinates Forward (+)

8614060 .. 8618173

Gene Structure 4114 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G15090.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2484 bp

ATGGATTTGCAAGAGAATCTGGTTAGTGATGCAGGGGATGACCATATGGTTGACATTGTAGTTGAACCGCATAGTAACAGAGATATAGGAATTGTTGATGAGTTCAATATAGGTGGAGATGTTGGATTTAGTGGTGATCTGGATCTTGAGCCACGAAATGGTATAGACTTTGATACCCATGAGGCAGCGTATATCTTTTATCAGGAATATGCAAAATCTATGGGTTTTACTACGTCGATTAAAAACAGTAGACGTTCCAAGAAAACTAAAGACTTCATTGATGCTAAGTTTGCTTGTTCCAGATATGGTGTGACTCCTGAGTCTGAGAGTAGTGGTAGTAGTAGTCGAAGGTCAACTGTGAAAAAAACAGATTGCAAGGCTAGTATGCATGTGAAGAGAAGACCAGATGGGAAATGGATCATTCATGAGTTTGTAAAGGATCACAATCACGAACTTTTACCTGCCCTTGCTTATCATTTCCGGATTCAGAGGAATGTCAAGTTAGCTGAGAAGAATAATATCGACATTCTGCATGCGGTTAGTGAACGGACCAAAAAAATGTATGTTGAAATGTCGAGACAATCTGGCGGATATAAGAATATCGGGTCTCTTCTTCAGACCGATGTCAGCAGTCAGGTTGATAAGGGTAGGTATCTAGCTTTGGAAGAAGGAGATTCTCAAGTACTGCTTGAGTACTTCAAGCGTATCAAGAAAGAAAACCCTAAATTCTTTTATGCTATAGACCTGAACGAGGACCAACGTTTAAGAAATCTGTTTTGGGCTGATGCCAAGAGCAGAGATGACTATTTGAGTTTCAATGATGTTGTATCCTTTGATACTACTTATGTCAAGTTTAACGATAAGTTGCCACTAGCTTTATTTATTGGGGTGAACCATCACTCCCAACCTATGTTACTAGGCTGTGCATTGGTTGCTGATGAGTCTATGGAGACTTTTGTGTGGCTGATAAAAACATGGCTACGAGCAATGGGTGGTCGAGCTCCTAAAGTTATACTCACTGACCAAGATAAATTCTTGATGTCTGCTGTTTCAGAGCTCCTACCAAACACTCGTCATTGCTTTGCGTTATGGCATGTTTTAGAAAAGATTCCTGAATATTTCTCACATGTGATGAAACGGCACGAGAATTTCTTACTGAAATTCAACAAATGCATTTTCAGATCTTGGACAGATGATGAGTTTGATATGAGGTGGTGGAAAATGGTCAGCCAGTTTGGACTTGAGAATGATGAATGGCTGCTATGGTTGCATGAACATCGCCAAAAGTGGGTGCCCACATTTATGAGCGATGTGTTTCTGGCAGGCATGTCGACATCTCAACGTTCAGAAAGTGTGAACTCTTTCTTCGATAAGTACATCCATAAGAAAATCACGCTGAAAGAGTTCTTGAGGCAATACGGTGTGATTCTGCAGAATAGGTACGAAGAGGAATCTGTTGCAGATTTCGATACTTGCCACAAGCAACCTGCATTGAAGTCCCCCTCGCCCTGGGAGAAGCAAATGGCAACAACTTACACCCACACAATATTTAAGAAATTTCAAGTCGAGGTCTTGGGGGTTGTCGCTTGCCATCCTAGAAAGGAAAAAGAAGATGAAAATATGGCGACGTTTAGAGTTCAAGACTGTGAAAAAGACGATGACTTTCTTGTAACGTGGAGCAAAACTAAGTCAGAACTTTGCTGCTTCTGTCGTATGTTTGAATACAAAGGGTTTCTTTGTCGGCATGCTTTGATGATTCTGCAGATGTGTGGTTTCGCCAGCATCCCGCCTCAGTATATATTGAAAAGGTGGACAAAAGATGCTAAGAGTGGAGTATTAGCTGGTGAAGGAGCAGACCAGATACAGACCCGAGTTCAGCGCTATAACGATTTGTGTAGTCGAGCCACTGAATTGAGTGAGGAAGGTTGTGTGTCAGAAGAAAACTACAACATCGCATTGCGCACACTAGTCGAGACCCTGAAAAATTGTGTTGATATGAATAATGCTAGAAACAACATCACTGAGTCTAATAGCCAGCTTAATAATGGTACTCACGAAGAAGAAAACCAGGTAATGGCTGGGGTAAAAGCAACAAAAAAGAAGACTGTATATAGGAAAAGAAAGGGACAACAAGAGGCTAGCCAAATGCTTGAATCTCAACAGAGCTTGCAACCAATGGAAACTATAAGTTCAGAGGCGATGGACATGAATGGTTACTATGGTCCTCAACAGAACGTTCAAGGACTGTTAAATTTAATGGAGCCACCTCATGAAGGCTACTATGTAGATCAACGAACCATCCAAGGCCTGGGACAACTGAATTCGATAGCACCGGCGCAGGATAGCTTCTTCACGAATCAGCAAGCCATGTCTGGGATGGTGGGTCAAATCGATTTCAGACCTCCTCCCAATTTCACTTACACTTTACAGGAAGAGCATTTGAGTTCTGCCCAATTACCTGGTAGTTCATCAAGGCAGCTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007602 GO:0008150 GO:0009314 GO:0009416 GO:0009581 GO:0009582 GO:0009583 GO:0009585 GO:0009605 GO:0009628 GO:0009639 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010017 GO:0010018 GO:0010218 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042752 GO:0042753 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051606 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0071490 GO:0080090 GO:0104004 GO:0140110 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAR1 MULE SWIM

Protein Analysis

827

Amino Acids

95.45

Weight (kDa)

6.18

Isoelectric Point (pI)

52.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAR1	PF03101	66 - 154	8e-31	FAR1 DNA-binding domain
ZSWIM1-3_RNaseH-like	PF21056	237 - 358	3.8e-06	Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
MULE	PF10551	275 - 368	2.8e-23	MULE transposase domain
SWIM	PF04434	555 - 591	1e-07	SWIM zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006484)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G15090 AT4G15090 AT4G15090 AT4G15090 AT4G15090
fragaria_vesca	FvH4_6g39512 FvH4_6g39512 FvH4_6g39512
malus_domestica	MD09G1139600.v1.1
prunus_persica	Prupe.3G186100_v2.0.a1 Prupe.3G186100_v2.0.a1 Prupe.3G186100_v2.0.a1 Prupe.3G186100_v2.0.a1
pyrus_communis	pycom09g06040
rosa_chinensis	RchiOBHm_Chr2g0153561
rosa_multiflora	Rmu_sc0002290.1_g000008 Rmu_sc0005507.1_g000038 Rmu_sc0017289.1_g000001
rosa_roxburghii	Rroxscaffold_2G00094920 Rroxscaffold_2G00134860
rosa_rugosa	Rorug02G0440100
rosa_samantha	Rh2AG503300 Rh2BG514000 Rh2CG489100 Rh2DG525700
rosa_wichuraiana	Rw2G041320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	319
Acc16I	TGCGCA	1 cut(s)	1961
Acc36I	ACCTGC	2 cut(s)	469, 1495
AccB1I	GGYRCC	1 cut(s)	1291
AccB7I	CCANNNNNTGG	3 cut(s)	158, 2074, 2308
AccI	GTMKAC	2 cut(s)	250, 1331
AccIII	TCCGGA	1 cut(s)	480
AciI	CCGC	4 cut(s)	68, 536, 588, 1787
AclI	AACGTT	3 cut(s)	760, 1342, 2235
AclWI	GGATC	3 cut(s)	150, 425, 447
AcsI	RAATTY	7 cut(s)	725, 1031, 1147, 1160, 1556, 2251, 2320
AcuI	CTGAAG	1 cut(s)	599
AfaI	GTAC	5 cut(s)	684, 695, 1376, 1442, 2050
AfeI	AGCGCT	1 cut(s)	1880
AfiI	CCNNNNNNNGG	8 cut(s)	158, 751, 1288, 1509, 2074, 2273, 2308, 2373
AflIII	ACRYGT	1 cut(s)	1126
AhlI	ACTAGT	1 cut(s)	1966
AjnI	CCWGG	4 cut(s)	1508, 2067, 2307, 2458
AjuI	GAANNNNNNNTTGG	2 cut(s)	760, 792
AloI	GAACNNNNNNTCC	2 cut(s)	884, 916
Alw21I	GWGCWC	2 cut(s)	1003, 1059
Alw26I	GTCTC	4 cut(s)	571, 612, 944, 1967
AlwI	GGATC	3 cut(s)	150, 425, 447
Ama87I	CYCGRG	1 cut(s)	1869
Aor13HI	TCCGGA	1 cut(s)	480
Aor51HI	AGCGCT	1 cut(s)	1880
AoxI	GGCC	1 cut(s)	2305
ApeKI	GCWGC	4 cut(s)	185, 1258, 1701, 2476
ApoI	RAATTY	7 cut(s)	725, 1031, 1147, 1160, 1556, 2251, 2320
Asp700I	GAANNNNTTC	3 cut(s)	1107, 1361, 1403
AspLEI	GCGC	3 cut(s)	1881, 1962, 2338
AspS9I	GGNCC	3 cut(s)	549, 754, 2222
AsuHPI	GGTGA	3 cut(s)	146, 901, 1856
AsuNHI	GCTAGC	1 cut(s)	2138
AvaI	CYCGRG	1 cut(s)	1869
AvaII	GGWCC	3 cut(s)	549, 754, 2222
BaeGI	GKGCMC	1 cut(s)	1296
BanI	GGYRCC	1 cut(s)	1291
BanII	GRGCYC	2 cut(s)	1003, 1059
BauI	CACGAG	1 cut(s)	1142
BbsI	GAAGAC	2 cut(s)	406, 2108
Bbv12I	GWGCWC	2 cut(s)	1003, 1059
BbvI	GCAGC	3 cut(s)	197, 1245, 1688
BccI	CCATC	6 cut(s)	401, 903, 1599, 2194, 2306, 2371
BceAI	ACGGC	1 cut(s)	1154
BcgI	CGANNNNNNTGC	6 cut(s)	1259, 1293, 1311, 1345, 1951, 1985
BciT130I	CCWGG	4 cut(s)	1510, 2069, 2309, 2460
BciVI	GTATCC	1 cut(s)	838
BcoDI	GTCTC	4 cut(s)	571, 612, 944, 1967
BcuI	ACTAGT	1 cut(s)	1966
BfaI	CTAG	8 cut(s)	381, 656, 872, 917, 1596, 1967, 2007, 2139
BfmI	CTRYAG	4 cut(s)	738, 1430, 1760, 2480
BfoI	RGCGCY	1 cut(s)	1882
BfuAI	ACCTGC	2 cut(s)	469, 1495
BfuI	GTATCC	1 cut(s)	838
BglII	AGATCT	1 cut(s)	1181
BisI	GCNGC	4 cut(s)	186, 1259, 1702, 2477
BlsI	GCNGC	4 cut(s)	187, 1260, 1703, 2478
BmcAI	AGTACT	2 cut(s)	684, 695
Bme1390I	CCNGG	4 cut(s)	1510, 2069, 2309, 2460
Bme18I	GGWCC	3 cut(s)	549, 754, 2222
BmeT110I	CYCGRG	1 cut(s)	1869
BmgT120I	GGNCC	3 cut(s)	549, 754, 2222
BmiI	GGNNCC	2 cut(s)	1293, 2262
BmrFI	CCNGG	4 cut(s)	1510, 2069, 2309, 2460
BmsI	GCATC	5 cut(s)	19, 271, 775, 1791, 1810
BmtI	GCTAGC	1 cut(s)	2142
BoxI	GACNNNNGTC	1 cut(s)	623
BpiI	GAAGAC	2 cut(s)	406, 2108
BpuEI	CTTGAG	5 cut(s)	167, 663, 710, 1262, 1429
Bsa29I	ATCGAT	1 cut(s)	2391
BsaBI	GATNNNNATC	2 cut(s)	141, 444
BsaI	GGTCTC	2 cut(s)	612, 1967
BsaJI	CCNNGG	4 cut(s)	1508, 1509, 2302, 2308
BsaWI	WCCGGW	1 cut(s)	480
BsaXI	ACNNNNNCTCC	2 cut(s)	884, 914
Bsc4I	CCNNNNNNNGG	8 cut(s)	158, 751, 1288, 1509, 2074, 2273, 2308, 2373
Bse118I	RCCGGY	1 cut(s)	2332
Bse1I	ACTGG	1 cut(s)	1231
Bse3DI	GCAATG	3 cut(s)	993, 1075, 1955
Bse8I	GATNNNNATC	2 cut(s)	141, 444
BseAI	TCCGGA	1 cut(s)	480
BseBI	CCWGG	4 cut(s)	1510, 2069, 2309, 2460
BseCI	ATCGAT	1 cut(s)	2391
BseDI	CCNNGG	4 cut(s)	1508, 1509, 2302, 2308
BseGI	GGATG	6 cut(s)	43, 1377, 1591, 1782, 2298, 2382
BseJI	GATNNNNATC	2 cut(s)	141, 444
BseLI	CCNNNNNNNGG	8 cut(s)	158, 751, 1288, 1509, 2074, 2273, 2308, 2373
BseMI	GCAATG	3 cut(s)	993, 1075, 1955
BseMII	CTCAG	5 cut(s)	309, 315, 498, 1805, 2013
BseNI	ACTGG	1 cut(s)	1231
BseRI	GAGGAG	1 cut(s)	2394
BseSI	GKGCMC	1 cut(s)	1296
BseXI	GCAGC	3 cut(s)	197, 1245, 1688
BseYI	CCCAGC	1 cut(s)	2078
BshFI	GGCC	1 cut(s)	2307
BshNI	GGYRCC	1 cut(s)	1291
BshVI	ATCGAT	1 cut(s)	2391
BsiHKAI	GWGCWC	2 cut(s)	1003, 1059
BsiHKCI	CYCGRG	1 cut(s)	1869
BsiSI	CCGG	2 cut(s)	481, 2333
BslFI	GGGAC	3 cut(s)	1483, 2139, 2325
BslI	CCNNNNNNNGG	8 cut(s)	158, 751, 1288, 1509, 2074, 2273, 2308, 2373
BsmAI	GTCTC	4 cut(s)	571, 612, 944, 1967
BsmFI	GGGAC	3 cut(s)	1483, 2139, 2325
BsnI	GGCC	1 cut(s)	2307
Bso31I	GGTCTC	2 cut(s)	612, 1967
BsoBI	CYCGRG	1 cut(s)	1869
Bsp1286I	GDGCHC	3 cut(s)	1003, 1059, 1296
Bsp13I	TCCGGA	1 cut(s)	480
Bsp143I	GATC	6 cut(s)	136, 142, 417, 439, 1181, 2287
BspACI	CCGC	4 cut(s)	68, 536, 588, 1787
BspANI	GGCC	1 cut(s)	2307
BspCNI	CTCAG	5 cut(s)	310, 316, 499, 1804, 2014
BspDI	ATCGAT	1 cut(s)	2391
BspEI	TCCGGA	1 cut(s)	480
BspHI	TCATGA	2 cut(s)	424, 2269
BspLI	GGNNCC	2 cut(s)	1293, 2262
BspMAI	CTGCAG	2 cut(s)	1434, 1764
BspMI	ACCTGC	2 cut(s)	469, 1495
BspOI	GCTAGC	1 cut(s)	2142
BspPI	GGATC	3 cut(s)	150, 425, 447
BspQI	GCTCTTC	1 cut(s)	2427
BspT107I	GGYRCC	1 cut(s)	1291
BspTNI	GGTCTC	2 cut(s)	612, 1967
BsrDI	GCAATG	3 cut(s)	993, 1075, 1955
BsrFI	RCCGGY	1 cut(s)	2332
BsrI	ACTGG	1 cut(s)	1231
BssAI	RCCGGY	1 cut(s)	2332
BssECI	CCNNGG	4 cut(s)	1508, 1509, 2302, 2308
BssMI	GATC	6 cut(s)	136, 142, 417, 439, 1181, 2287
BssSI	CACGAG	1 cut(s)	1142
BssT1I	CCWWGG	1 cut(s)	2302
Bst2BI	CACGAG	1 cut(s)	1142
Bst2UI	CCWGG	4 cut(s)	1510, 2069, 2309, 2460
Bst4CI	ACNGT	6 cut(s)	248, 358, 1421, 1646, 2107, 2247
Bst6I	CTCTTC	4 cut(s)	389, 615, 1440, 2427
BstAPI	GCANNNNNTGC	1 cut(s)	932
BstC8I	GCNNGC	9 cut(s)	534, 1324, 1588, 1746, 1780, 2036, 2140, 2168, 2364
BstDEI	CTNAG	8 cut(s)	285, 318, 324, 507, 1686, 1791, 1824, 2022
BstENI	CCTNNNNNAGG	2 cut(s)	749, 2271
BstF5I	GGATG	6 cut(s)	43, 1377, 1591, 1782, 2298, 2382
BstH2I	RGCGCY	1 cut(s)	1882
BstHHI	GCGC	3 cut(s)	1881, 1962, 2338
BstKTI	GATC	6 cut(s)	139, 145, 420, 442, 1184, 2290
BstMAI	GTCTC	4 cut(s)	571, 612, 944, 1967
BstMBI	GATC	6 cut(s)	136, 142, 417, 439, 1181, 2287
BstMWI	GCNNNNNNNGC	3 cut(s)	290, 932, 1267
BstNI	CCWGG	4 cut(s)	1510, 2069, 2309, 2460
BstNSI	RCATGY	6 cut(s)	392, 536, 1097, 1130, 1330, 1748
BstPAI	GACNNNNGTC	1 cut(s)	623
BstSCI	CCNGG	4 cut(s)	1508, 2067, 2307, 2458
BstSFI	CTRYAG	4 cut(s)	738, 1430, 1760, 2480
BstSLI	GKGCMC	1 cut(s)	1296
BstV1I	GCAGC	3 cut(s)	197, 1245, 1688
BstV2I	GAAGAC	2 cut(s)	406, 2108
BstX2I	RGATCY	2 cut(s)	142, 1181
BstXI	CCANNNNNNTGG	1 cut(s)	2459
BstYI	RGATCY	2 cut(s)	142, 1181
Bsu15I	ATCGAT	1 cut(s)	2391
BsuI	GTATCC	1 cut(s)	838
BsuRI	GGCC	1 cut(s)	2307
BsuTUI	ATCGAT	1 cut(s)	2391
BtgZI	GCGATG	4 cut(s)	1262, 1323, 1936, 2213
BtsCI	GGATG	6 cut(s)	43, 1377, 1591, 1782, 2298, 2382
BtsIMutI	CAGTG	3 cut(s)	1017, 1905, 2019
BveI	ACCTGC	2 cut(s)	469, 1495
Cac8I	GCNNGC	9 cut(s)	534, 1324, 1588, 1746, 1780, 2036, 2140, 2168, 2364
CciI	TCATGA	2 cut(s)	424, 2269
CfoI	GCGC	3 cut(s)	1881, 1962, 2338
Cfr10I	RCCGGY	1 cut(s)	2332
Cfr13I	GGNCC	3 cut(s)	549, 754, 2222
ClaI	ATCGAT	1 cut(s)	2391
CsiI	ACCWGGT	2 cut(s)	2067, 2458
Csp6I	GTAC	5 cut(s)	683, 694, 1375, 1441, 2049
CspCI	CAANNNNNGTGG	2 cut(s)	94, 129
CviQI	GTAC	5 cut(s)	683, 694, 1375, 1441, 2049
DdeI	CTNAG	8 cut(s)	285, 318, 324, 507, 1686, 1791, 1824, 2022
DpnI	GATC	6 cut(s)	138, 144, 419, 441, 1183, 2289
DpnII	GATC	6 cut(s)	136, 142, 417, 439, 1181, 2287
DrdI	GACNNNNNNGTC	1 cut(s)	319
DseDI	GACNNNNNNGTC	1 cut(s)	319
Eam1104I	CTCTTC	4 cut(s)	389, 615, 1440, 2427
EarI	CTCTTC	4 cut(s)	389, 615, 1440, 2427
EciI	GGCGGA	1 cut(s)	603
Ecl136II	GAGCTC	2 cut(s)	1001, 1057
Eco130I	CCWWGG	1 cut(s)	2302
Eco147I	AGGCCT	1 cut(s)	2307
Eco24I	GRGCYC	2 cut(s)	1003, 1059
Eco31I	GGTCTC	2 cut(s)	612, 1967
Eco47I	GGWCC	3 cut(s)	549, 754, 2222
Eco47III	AGCGCT	1 cut(s)	1880
Eco53kI	GAGCTC	2 cut(s)	1001, 1057
Eco57I	CTGAAG	1 cut(s)	599
Eco88I	CYCGRG	1 cut(s)	1869
EcoICRI	GAGCTC	2 cut(s)	1001, 1057
EcoNI	CCTNNNNNAGG	2 cut(s)	749, 2271
EcoRI	GAATTC	1 cut(s)	2320
EcoRII	CCWGG	4 cut(s)	1508, 2067, 2307, 2458
EcoT14I	CCWWGG	1 cut(s)	2302
EcoT22I	ATGCAT	2 cut(s)	390, 1175
EcoT38I	GRGCYC	2 cut(s)	1003, 1059
ErhI	CCWWGG	1 cut(s)	2302
FalI	AAGNNNNNCTT	4 cut(s)	672, 704, 1719, 1751
FaqI	GGGAC	3 cut(s)	1483, 2139, 2325
FauI	CCCGC	1 cut(s)	1794
FauNDI	CATATG	1 cut(s)	45
FblI	GTMKAC	2 cut(s)	250, 1331
Fnu4HI	GCNGC	4 cut(s)	186, 1259, 1702, 2477
FokI	GGATG	6 cut(s)	50, 1364, 1578, 1769, 2285, 2389
FriOI	GRGCYC	2 cut(s)	1003, 1059
Fsp4HI	GCNGC	4 cut(s)	186, 1259, 1702, 2477
FspBI	CTAG	8 cut(s)	381, 656, 872, 917, 1596, 1967, 2007, 2139
FspI	TGCGCA	1 cut(s)	1961
GlaI	GCGC	3 cut(s)	1880, 1961, 2337
GluI	GCNGC	4 cut(s)	186, 1259, 1702, 2477
GsaI	CCCAGC	1 cut(s)	2082
HaeII	RGCGCY	1 cut(s)	1882
HaeIII	GGCC	1 cut(s)	2307
HapII	CCGG	2 cut(s)	481, 2333
HhaI	GCGC	3 cut(s)	1881, 1962, 2338
Hin6I	GCGC	3 cut(s)	1879, 1960, 2336
HinP1I	GCGC	3 cut(s)	1879, 1960, 2336
HincII	GTYRAC	3 cut(s)	52, 354, 1332
HindII	GTYRAC	3 cut(s)	52, 354, 1332
HpaII	CCGG	2 cut(s)	481, 2333
HphI	GGTGA	3 cut(s)	146, 901, 1856
Hpy166II	GTNNAC	8 cut(s)	52, 251, 354, 545, 892, 1332, 1357, 1812
Hpy8I	GTNNAC	8 cut(s)	52, 251, 354, 545, 892, 1332, 1357, 1812
Hpy99I	CGWCG	2 cut(s)	238, 1630
HpyAV	CCTTC	5 cut(s)	342, 662, 1841, 1916, 2267
HpyCH4III	ACNGT	6 cut(s)	248, 358, 1421, 1646, 2107, 2247
HpyCH4IV	ACGT	7 cut(s)	233, 253, 760, 1342, 1628, 1673, 2235
HpyF10VI	GCNNNNNNNGC	3 cut(s)	290, 932, 1267
HpyF3I	CTNAG	8 cut(s)	285, 318, 324, 507, 1686, 1791, 1824, 2022
HpySE526I	ACGT	7 cut(s)	233, 253, 760, 1342, 1628, 1673, 2235
HspAI	GCGC	3 cut(s)	1879, 1960, 2336
Kpn2I	TCCGGA	1 cut(s)	480
Kzo9I	GATC	6 cut(s)	136, 142, 417, 439, 1181, 2287
LguI	GCTCTTC	1 cut(s)	2427
LmnI	GCTCC	5 cut(s)	1006, 1062, 1677, 1850, 2260
Lsp1109I	GCAGC	3 cut(s)	197, 1245, 1688
LweI	GCATC	5 cut(s)	19, 271, 775, 1791, 1810
MabI	ACCWGGT	2 cut(s)	2067, 2458
MaeI	CTAG	8 cut(s)	381, 656, 872, 917, 1596, 1967, 2007, 2139
MaeII	ACGT	7 cut(s)	233, 253, 760, 1342, 1628, 1673, 2235
MaeIII	GTNAC	5 cut(s)	74, 310, 912, 1669, 2213
MalI	GATC	6 cut(s)	138, 144, 419, 441, 1183, 2289
MboI	GATC	6 cut(s)	136, 142, 417, 439, 1181, 2287
MflI	RGATCY	2 cut(s)	142, 1181
MhlI	GDGCHC	3 cut(s)	1003, 1059, 1296
MlyI	GAGTC	4 cut(s)	307, 329, 950, 2033
MmeI	TCCRAC	1 cut(s)	103
Mph1103I	ATGCAT	2 cut(s)	390, 1175
MroI	TCCGGA	1 cut(s)	480
MroXI	GAANNNNTTC	3 cut(s)	1107, 1361, 1403
MseI	TTAA	7 cut(s)	240, 764, 855, 1551, 2040, 2249, 2255
MslI	CAYNNNNRTG	1 cut(s)	1301
MspI	CCGG	2 cut(s)	481, 2333
MspR9I	CCNGG	4 cut(s)	1510, 2069, 2309, 2460
MvaI	CCWGG	4 cut(s)	1510, 2069, 2309, 2460
MwoI	GCNNNNNNNGC	3 cut(s)	290, 932, 1267
NdeI	CATATG	1 cut(s)	45
NdeII	GATC	6 cut(s)	136, 142, 417, 439, 1181, 2287
NheI	GCTAGC	1 cut(s)	2138
NlaIV	GGNNCC	2 cut(s)	1293, 2262
NmuCI	GTSAC	1 cut(s)	310
NsbI	TGCGCA	1 cut(s)	1961
NsiI	ATGCAT	2 cut(s)	390, 1175
NspI	RCATGY	6 cut(s)	392, 536, 1097, 1130, 1330, 1748
PaeI	GCATGC	2 cut(s)	536, 1748
PagI	TCATGA	2 cut(s)	424, 2269
PasI	CCCWGGG	1 cut(s)	1509
PceI	AGGCCT	1 cut(s)	2307
PciI	ACATGT	1 cut(s)	1126
PciSI	GCTCTTC	1 cut(s)	2427
PdmI	GAANNNNTTC	3 cut(s)	1107, 1361, 1403
PfeI	GAWTC	9 cut(s)	16, 484, 674, 1108, 1426, 1451, 1756, 2153, 2356
PflMI	CCANNNNNTGG	3 cut(s)	158, 2074, 2308
PkrI	GCNGC	4 cut(s)	187, 1260, 1703, 2478
PleI	GAGTC	4 cut(s)	307, 328, 949, 2032
PpsI	GAGTC	4 cut(s)	307, 328, 949, 2032
PscI	ACATGT	1 cut(s)	1126
PshAI	GACNNNNGTC	1 cut(s)	623
Psp124BI	GAGCTC	2 cut(s)	1003, 1059
Psp1406I	AACGTT	3 cut(s)	760, 1342, 2235
Psp6I	CCWGG	4 cut(s)	1508, 2067, 2307, 2458
PspFI	CCCAGC	1 cut(s)	2078
PspGI	CCWGG	4 cut(s)	1508, 2067, 2307, 2458
PspN4I	GGNNCC	2 cut(s)	1293, 2262
PspPI	GGNCC	3 cut(s)	549, 754, 2222
PstI	CTGCAG	2 cut(s)	1434, 1764
PsuI	RGATCY	2 cut(s)	142, 1181
RsaI	GTAC	5 cut(s)	684, 695, 1376, 1442, 2050
RsaNI	GTAC	5 cut(s)	683, 694, 1375, 1441, 2049
RseI	CAYNNNNRTG	1 cut(s)	1301
SacI	GAGCTC	2 cut(s)	1003, 1059
SalI	GTCGAC	1 cut(s)	1330
SapI	GCTCTTC	1 cut(s)	2427
SaqAI	TTAA	7 cut(s)	240, 764, 855, 1551, 2040, 2249, 2255
SatI	GCNGC	4 cut(s)	186, 1259, 1702, 2477
Sau3AI	GATC	6 cut(s)	136, 142, 417, 439, 1181, 2287
Sau96I	GGNCC	3 cut(s)	549, 754, 2222
ScaI	AGTACT	2 cut(s)	684, 695
SchI	GAGTC	4 cut(s)	307, 329, 950, 2033
ScrFI	CCNGG	4 cut(s)	1510, 2069, 2309, 2460
SduI	GDGCHC	3 cut(s)	1003, 1059, 1296
SexAI	ACCWGGT	2 cut(s)	2067, 2458
SfaNI	GCATC	5 cut(s)	19, 271, 775, 1791, 1810
SfcI	CTRYAG	4 cut(s)	738, 1430, 1760, 2480
SgrAI	CRCCGGYG	1 cut(s)	2332
SinI	GGWCC	3 cut(s)	549, 754, 2222
SmiMI	CAYNNNNRTG	1 cut(s)	1301
SmlI	CTYRAG	5 cut(s)	146, 678, 689, 1241, 1408
SmoI	CTYRAG	5 cut(s)	146, 678, 689, 1241, 1408
SpeI	ACTAGT	1 cut(s)	1966
SphI	GCATGC	2 cut(s)	536, 1748
SseBI	AGGCCT	1 cut(s)	2307
SsiI	CCGC	4 cut(s)	68, 536, 588, 1787
SspI	AATATT	2 cut(s)	1118, 1548
SspMI	CTAG	8 cut(s)	381, 656, 872, 917, 1596, 1967, 2007, 2139
SstI	GAGCTC	2 cut(s)	1003, 1059
StuI	AGGCCT	1 cut(s)	2307
StyD4I	CCNGG	4 cut(s)	1508, 2067, 2307, 2458
StyI	CCWWGG	1 cut(s)	2302
TaaI	ACNGT	6 cut(s)	248, 358, 1421, 1646, 2107, 2247
TaiI	ACGT	7 cut(s)	236, 256, 763, 1345, 1631, 1676, 2238
TaqII	GACCGA	1 cut(s)	635
TatI	WGTACW	3 cut(s)	682, 693, 1374
TfiI	GAWTC	9 cut(s)	16, 484, 674, 1108, 1426, 1451, 1756, 2153, 2356
Tru1I	TTAA	7 cut(s)	240, 764, 855, 1551, 2040, 2249, 2255
Tru9I	TTAA	7 cut(s)	240, 764, 855, 1551, 2040, 2249, 2255
TscAI	CASTG	3 cut(s)	1024, 1912, 2026
TseFI	GTSAC	1 cut(s)	310
TseI	GCWGC	4 cut(s)	185, 1258, 1701, 2476
Tsp45I	GTSAC	1 cut(s)	310
TspGWI	ACGGA	1 cut(s)	562
TspRI	CASTG	3 cut(s)	1024, 1912, 2026
Van91I	CCANNNNNTGG	3 cut(s)	158, 2074, 2308
VpaK11BI	GGWCC	3 cut(s)	549, 754, 2222
XagI	CCTNNNNNAGG	2 cut(s)	749, 2271
XapI	RAATTY	7 cut(s)	725, 1031, 1147, 1160, 1556, 2251, 2320
XceI	RCATGY	6 cut(s)	392, 536, 1097, 1130, 1330, 1748
XcmI	CCANNNNNNNNNTGG	5 cut(s)	411, 2042, 2075, 2305, 2374
XmiI	GTMKAC	2 cut(s)	250, 1331
XmnI	GAANNNNTTC	3 cut(s)	1107, 1361, 1403
XspI	CTAG	8 cut(s)	381, 656, 872, 917, 1596, 1967, 2007, 2139
ZrmI	AGTACT	2 cut(s)	684, 695
Zsp2I	ATGCAT	2 cut(s)	390, 1175

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.