Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0006484

Physical Location & Seq

Genomic Coordinates Reverse (-)

67368751 .. 67372667

Gene Structure 3917 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G041320.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2508 bp

ATGGATAAAAATCAAAGATTGGTTGGAATGTTGGTGGACGGTCAAGACAATATGAATGATGGTAGGGTAAATGAGAATATGAATATGGTTCCTCTTGTGGAAGAAGCGCAAAATAGTGGTGGCGGGATCATCGGTTCTCCTAAAAGGGATGTTCAAGTGTTTGAGGGGGATGCAGATTTTGAACCAGGTAATGGCATTGAATTTGATTCACATGAGGCGGCATACTCATTTTATCAAGAATATGCCAAGTCTATGGGATTCACCACATCAATAAAAAACAGTCGGCGTTCTAAGAAATCAAAAGAATTTATTGATGCCAAATTTGCATGTTCGCGATATGGAGTTACACCAGAATCTGATAGCGGGAGTAGTCGTCGACCGACTGTGAAAAAGACAGACTGCAAGGCCAGCATGCATGTCAAGAGAAGGGCAGATGGAAAGTGGATTATTCATGAATTCATTAAGGAGCATAATCATGAGCTTTTACCTGCTCTAGCATATCATTTTCGAATTCATAGGAATGTGAAGTTAGCTGAAAAGAATAATATGGACATCTTGCAAGCAGTCAGTGAACGAACAAGAAAGATGTATGTTGAGATGTCTCGACAATCTGGTGGCTATCAATATACCGGCTTTCTTCGGACTGACACAAAGTATCAGTTTGATAAATGCCTGCATTTAGGTCTGGATGAGGGAGATGCTCAAGTAATGCTTGAATACTTTAAGCGTATCCAGAAGGACAACCCCAACTTCTTCTATGCTATAGATTTGAATGAGGAGCAGCGTGTGAGAAATTTGTTCTGGGTTGATGCAAAAAGTAGGAGTGATTATAAGAGTTTTAACGATGTTGTCTCTTTTGACACCTCTTACATCAAAATCAATGAAAAGTTGCCATTTGCTCCTTTTGTTGGGGTGAACCACCACTTTCAGCCAATGTTGCTTGGTTGTGCGTTAATTGCAGACGACAGTAAAGCAACATTTTTATGGTTGTTGACAACATGGGTTAGAGCAATGGGTGGGCTACATCCTAAAGTGATTATCTCTGATCAAGACGATAACTTGAAGGCAGCCATTGAAGAAGTCTTTCAAGATGCACGTCACTGCTTTTCACTTTGGAACATATTGGAAAAGATTCCTGAAGTTCTTGCTCCTGTAATCAAACAGCATGAGAATTTCTTGCCAAAGTTTCACAAGTGCATTTTTAAGTCATGGACAGAAGAACAGTTTGACATGAGATGGTGGAAAATGGTTACCAGATTTGAACTTCAAGATGACGTATTGATTCGTTCGCTGTATGATGATCGTAAAAGATGGGTGCCTAGTTATTTGGGAGATACTTTTTTAGCTGGAATGTGTACAACTCAGCGTTCTGAGAGTATGAACTCTTTCTTTGACAAATACATACACAAGAAAATTACACTGAAAGAGTTTGTCAAACAATATGGGTCAATCCTACAAAATAGGTATGATGAGGAAGCAATTGCGGATTTTGATACATGGCACAAACAGCCTGCATTAAAGTCTCCTTCTCCTTGGGAAAAACAAATGTCAACAGTTTACACGCATGCAGTATTCAGAAAGTTTCAAGTTGAGGTCTTAGGTGTAGTTGGCTGCCAGCCAAAGAAAGAACATGAAGATGGATTAACTGCCACATTCAGAGTTCAAGACTGTGAAAAGGAAGAATATTTTATGGTAACCTGGACTGAAACAAAGTCAGAGGTTTCTTGTTCCTGTCGTTTGTTCGAGTACAAAGGTTTCCTTTGCAGACATTCACTGATTGTTCTCCAAATTTGTGGCCATTCAAGCATCCCGCTGCATTATATTTTGAAGAGGTGGACAAAAGATGCAAAAAGCAGCCAATCTATCCTTGAAGGATCAGAGCTAGTACGTACTAGGGTGCAACGCTACAATGATTTATGTAAACGAGCTATTGAATTGAGTGAAGAAGGATCATTATCTGAAGAGACTTATAATATTGCTTTTCGCACACTCGTAGAAGCTTTGAAGAACTGTGTGAATGTAAATAACTCTAATGCAACTGTTGTGGACTTGAGTAGCAGTGTTCACGGTATTCGTGAAGCAGAAGAAGAAAATCAAGGAAGCCTTACTGCAAAACCAAGTAGGAAGAGAAATACAAATAGGAAAAGAAAGGTGCAAGCAGAGCAAGATGTCATACTTGGCGAAGCACAAGACAGCTTGCAGCAAATGGAAAATTTGAGCTCCGATGGTATGGCCCTTAGTGGATATTATGGTGCTCAACATGGACTGGTGCAGTTAAACTTAATGGAGCCACCCCATGACAGTTACTATGTTAACCAGGAAAGTATGCAGGGGCTGGGCCAACTGAATTCAATAGCACCCAGCGATGATGGTTTTTTTGGGACTCAACAAATTCATGGGCTGGGACAATTGGACTTCCGACCATCATCTAGTTTCAGTTATAGCTTACAGGATGAACCGCATTTGAGATCTGCAGAGTTGCATGGCAGTTCTTCAAGACATTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007602 GO:0008150 GO:0009314 GO:0009416 GO:0009581 GO:0009582 GO:0009583 GO:0009585 GO:0009605 GO:0009628 GO:0009639 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010017 GO:0010018 GO:0010218 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042752 GO:0042753 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051606 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0071490 GO:0080090 GO:0104004 GO:0140110 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAR1 MULE SWIM

Protein Analysis

835

Amino Acids

96.07

Weight (kDa)

6.36

Isoelectric Point (pI)

54.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAR1	PF03101	76 - 163	4.1e-29	FAR1 DNA-binding domain
MULE	PF10551	283 - 376	4.7e-20	MULE transposase domain
SWIM	PF04434	573 - 598	2.9e-06	SWIM zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006484)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G15090 AT4G15090 AT4G15090 AT4G15090 AT4G15090
fragaria_vesca	FvH4_6g39512 FvH4_6g39512 FvH4_6g39512
malus_domestica	MD09G1139600.v1.1
prunus_persica	Prupe.3G186100_v2.0.a1 Prupe.3G186100_v2.0.a1 Prupe.3G186100_v2.0.a1 Prupe.3G186100_v2.0.a1
pyrus_communis	pycom09g06040
rosa_chinensis	RchiOBHm_Chr2g0153561
rosa_multiflora	Rmu_sc0002290.1_g000008 Rmu_sc0005507.1_g000038 Rmu_sc0017289.1_g000001
rosa_roxburghii	Rroxscaffold_2G00094920 Rroxscaffold_2G00134860
rosa_rugosa	Rorug02G0440100
rosa_samantha	Rh2AG503300 Rh2BG514000 Rh2CG489100 Rh2DG525700
rosa_wichuraiana	Rw2G041320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	831, 1971
Acc36I	ACCTGC	1 cut(s)	496
AccB1I	GGYRCC	1 cut(s)	1315
AccB7I	CCANNNNNTGG	1 cut(s)	191
AccI	GTMKAC	1 cut(s)	376
AccII	CGCG	1 cut(s)	334
AciI	CCGC	6 cut(s)	123, 218, 363, 1484, 1811, 2459
AclWI	GGATC	3 cut(s)	134, 1882, 1957
AcoI	YGGCCR	1 cut(s)	1795
AcuI	CTGAAG	2 cut(s)	1158, 1980
AfaI	GTAC	4 cut(s)	1357, 1748, 1887, 1891
AfiI	CCNNNNNNNGG	2 cut(s)	191, 908
AjiI	CACGTC	1 cut(s)	1097
AjnI	CCWGG	3 cut(s)	184, 1697, 2316
AloI	GAACNNNNNNTCC	2 cut(s)	118, 150
AluBI	AGCT	9 cut(s)	481, 533, 1346, 1882, 1928, 2000, 2196, 2220, 2445
AluI	AGCT	9 cut(s)	481, 533, 1346, 1882, 1928, 2000, 2196, 2220, 2445
Alw21I	GWGCWC	2 cut(s)	2222, 2257
Alw26I	GTCTC	4 cut(s)	606, 856, 1527, 1958
AlwI	GGATC	3 cut(s)	134, 1882, 1957
AlwNI	CAGNNNCTG	2 cut(s)	356, 2335
AoxI	GGCC	4 cut(s)	405, 1795, 2232, 2338
ApeKI	GCWGC	6 cut(s)	781, 1067, 1611, 1813, 1854, 2200
Asp700I	GAANNNNTTC	3 cut(s)	1083, 1131, 1385
AspLEI	GCGC	1 cut(s)	109
AspS9I	GGNCC	2 cut(s)	2233, 2338
AsuHPI	GGTGA	2 cut(s)	253, 925
AsuII	TTCGAA	1 cut(s)	508
BalI	TGGCCA	1 cut(s)	1797
BanI	GGYRCC	1 cut(s)	1315
BanII	GRGCYC	1 cut(s)	2222
Bbv12I	GWGCWC	2 cut(s)	2222, 2257
BbvI	GCAGC	6 cut(s)	793, 1079, 1598, 1800, 1866, 2212
BccI	CCATC	8 cut(s)	53, 428, 1230, 1305, 1631, 2219, 2363, 2431
BciT130I	CCWGG	3 cut(s)	186, 1699, 2318
BciVI	GTATCC	1 cut(s)	740
BclI	TGATCA	1 cut(s)	1045
BcoDI	GTCTC	4 cut(s)	606, 856, 1527, 1958
BfaI	CTAG	5 cut(s)	494, 1320, 1883, 1893, 2430
BfmI	CTRYAG	2 cut(s)	762, 2472
BfuAI	ACCTGC	1 cut(s)	496
BfuI	GTATCC	1 cut(s)	740
BglII	AGATCT	1 cut(s)	2468
BisI	GCNGC	7 cut(s)	219, 782, 1068, 1612, 1814, 1855, 2201
BlsI	GCNGC	7 cut(s)	220, 783, 1069, 1613, 1815, 1856, 2202
Bme1390I	CCNGG	3 cut(s)	186, 1699, 2318
BmgBI	CACGTC	1 cut(s)	1097
BmgT120I	GGNCC	2 cut(s)	2233, 2338
BmiI	GGNNCC	3 cut(s)	90, 1317, 2289
BmrFI	CCNGG	3 cut(s)	186, 1699, 2318
BmsI	GCATC	7 cut(s)	160, 304, 688, 799, 1081, 1815, 1834
Bpu14I	TTCGAA	1 cut(s)	508
BpuEI	CTTGAG	2 cut(s)	687, 2071
BsaAI	YACGTR	1 cut(s)	1889
BsaBI	GATNNNNATC	2 cut(s)	9, 1954
BsaJI	CCNNGG	1 cut(s)	1532
BsaXI	ACNNNNNCTCC	2 cut(s)	358, 388
Bsc4I	CCNNNNNNNGG	2 cut(s)	191, 908
Bse118I	RCCGGY	1 cut(s)	629
Bse1I	ACTGG	1 cut(s)	2271
Bse3DI	GCAATG	1 cut(s)	1017
Bse8I	GATNNNNATC	2 cut(s)	9, 1954
BseBI	CCWGG	3 cut(s)	186, 1699, 2318
BseDI	CCNNGG	1 cut(s)	1532
BseGI	GGATG	6 cut(s)	154, 175, 694, 1024, 1806, 2458
BseJI	GATNNNNATC	2 cut(s)	9, 1954
BseLI	CCNNNNNNNGG	2 cut(s)	191, 908
BseMI	GCAATG	1 cut(s)	1017
BseMII	CTCAG	2 cut(s)	1362, 1376
BseNI	ACTGG	1 cut(s)	2271
BseRI	GAGGAG	1 cut(s)	791
BseXI	GCAGC	6 cut(s)	793, 1079, 1598, 1800, 1866, 2212
BseYI	CCCAGC	3 cut(s)	2335, 2360, 2401
BsgI	GTGCAG	1 cut(s)	2291
Bsh1236I	CGCG	1 cut(s)	334
Bsh1285I	CGRYCG	1 cut(s)	380
BshFI	GGCC	4 cut(s)	407, 1797, 2234, 2340
BshNI	GGYRCC	1 cut(s)	1315
BsiEI	CGRYCG	1 cut(s)	380
BsiHKAI	GWGCWC	2 cut(s)	2222, 2257
BsiSI	CCGG	1 cut(s)	630
BslFI	GGGAC	2 cut(s)	2395, 2418
BslI	CCNNNNNNNGG	2 cut(s)	191, 908
BsmAI	GTCTC	4 cut(s)	606, 856, 1527, 1958
BsmFI	GGGAC	2 cut(s)	2395, 2418
BsnI	GGCC	4 cut(s)	407, 1797, 2234, 2340
Bsp119I	TTCGAA	1 cut(s)	508
Bsp1286I	GDGCHC	2 cut(s)	2222, 2257
Bsp1407I	TGTACA	1 cut(s)	1355
Bsp143I	GATC	6 cut(s)	126, 1045, 1300, 1874, 1949, 2468
Bsp68I	TCGCGA	1 cut(s)	334
BspACI	CCGC	6 cut(s)	123, 218, 363, 1484, 1811, 2459
BspANI	GGCC	4 cut(s)	407, 1797, 2234, 2340
BspCNI	CTCAG	2 cut(s)	1363, 1375
BspFNI	CGCG	1 cut(s)	334
BspHI	TCATGA	3 cut(s)	451, 475, 2504
BspLI	GGNNCC	3 cut(s)	90, 1317, 2289
BspMAI	CTGCAG	1 cut(s)	2476
BspMI	ACCTGC	1 cut(s)	496
BspPI	GGATC	3 cut(s)	134, 1882, 1957
BspT104I	TTCGAA	1 cut(s)	508
BspT107I	GGYRCC	1 cut(s)	1315
BsrDI	GCAATG	1 cut(s)	1017
BsrFI	RCCGGY	1 cut(s)	629
BsrGI	TGTACA	1 cut(s)	1355
BsrI	ACTGG	1 cut(s)	2271
BssAI	RCCGGY	1 cut(s)	629
BssECI	CCNNGG	1 cut(s)	1532
BssMI	GATC	6 cut(s)	126, 1045, 1300, 1874, 1949, 2468
BssT1I	CCWWGG	1 cut(s)	1532
Bst2UI	CCWGG	3 cut(s)	186, 1699, 2318
Bst6I	CTCTTC	3 cut(s)	1823, 1956, 2120
BstAUI	TGTACA	1 cut(s)	1355
BstBAI	YACGTR	1 cut(s)	1889
BstBI	TTCGAA	1 cut(s)	508
BstC8I	GCNNGC	9 cut(s)	409, 413, 561, 674, 1512, 1566, 1616, 2157, 2198
BstDEI	CTNAG	5 cut(s)	291, 1362, 1371, 1597, 2237
BstEII	GGTNACC	2 cut(s)	1249, 1693
BstF5I	GGATG	6 cut(s)	154, 175, 694, 1024, 1806, 2458
BstFNI	CGCG	1 cut(s)	334
BstHHI	GCGC	1 cut(s)	109
BstKTI	GATC	6 cut(s)	129, 1048, 1303, 1877, 1952, 2471
BstMAI	GTCTC	4 cut(s)	606, 856, 1527, 1958
BstMBI	GATC	6 cut(s)	126, 1045, 1300, 1874, 1949, 2468
BstMCI	CGRYCG	1 cut(s)	380
BstMWI	GCNNNNNNNGC	7 cut(s)	323, 408, 937, 956, 1507, 1803, 2161
BstNI	CCWGG	3 cut(s)	186, 1699, 2318
BstNSI	RCATGY	4 cut(s)	330, 415, 419, 1568
BstPI	GGTNACC	2 cut(s)	1249, 1693
BstSCI	CCNGG	3 cut(s)	184, 1697, 2316
BstSFI	CTRYAG	2 cut(s)	762, 2472
BstSNI	TACGTA	1 cut(s)	1889
BstUI	CGCG	1 cut(s)	334
BstV1I	GCAGC	6 cut(s)	793, 1079, 1598, 1800, 1866, 2212
BstX2I	RGATCY	1 cut(s)	2468
BstXI	CCANNNNNNTGG	2 cut(s)	253, 1793
BstYI	RGATCY	1 cut(s)	2468
BsuI	GTATCC	1 cut(s)	740
BsuRI	GGCC	4 cut(s)	407, 1797, 2234, 2340
BtgZI	GCGATG	1 cut(s)	2379
BtrI	CACGTC	1 cut(s)	1097
BtsCI	GGATG	6 cut(s)	154, 175, 694, 1024, 1806, 2458
BtsI	GCAGTG	2 cut(s)	1099, 2065
BtsIMutI	CAGTG	5 cut(s)	574, 1099, 1418, 1772, 2065
BtuMI	TCGCGA	1 cut(s)	334
BveI	ACCTGC	1 cut(s)	496
Cac8I	GCNNGC	9 cut(s)	409, 413, 561, 674, 1512, 1566, 1616, 2157, 2198
CaiI	CAGNNNCTG	2 cut(s)	356, 2335
CciI	TCATGA	3 cut(s)	451, 475, 2504
CfoI	GCGC	1 cut(s)	109
Cfr10I	RCCGGY	1 cut(s)	629
Cfr13I	GGNCC	2 cut(s)	2233, 2338
CsiI	ACCWGGT	1 cut(s)	184
Csp6I	GTAC	4 cut(s)	1356, 1747, 1886, 1890
CspCI	CAANNNNNGTGG	2 cut(s)	2025, 2060
CviQI	GTAC	4 cut(s)	1356, 1747, 1886, 1890
DdeI	CTNAG	5 cut(s)	291, 1362, 1371, 1597, 2237
DpnI	GATC	6 cut(s)	128, 1047, 1302, 1876, 1951, 2470
DpnII	GATC	6 cut(s)	126, 1045, 1300, 1874, 1949, 2468
EaeI	YGGCCR	1 cut(s)	1795
Eam1104I	CTCTTC	3 cut(s)	1823, 1956, 2120
EarI	CTCTTC	3 cut(s)	1823, 1956, 2120
Ecl136II	GAGCTC	1 cut(s)	2220
Eco105I	TACGTA	1 cut(s)	1889
Eco130I	CCWWGG	1 cut(s)	1532
Eco24I	GRGCYC	1 cut(s)	2222
Eco53kI	GAGCTC	1 cut(s)	2220
Eco57I	CTGAAG	2 cut(s)	1158, 1980
Eco91I	GGTNACC	2 cut(s)	1249, 1693
EcoICRI	GAGCTC	1 cut(s)	2220
EcoO65I	GGTNACC	2 cut(s)	1249, 1693
EcoRI	GAATTC	3 cut(s)	455, 510, 2347
EcoRII	CCWGG	3 cut(s)	184, 1697, 2316
EcoT14I	CCWWGG	1 cut(s)	1532
EcoT22I	ATGCAT	1 cut(s)	417
EcoT38I	GRGCYC	1 cut(s)	2222
ErhI	CCWWGG	1 cut(s)	1532
FalI	AAGNNNNNCTT	6 cut(s)	696, 728, 1743, 1775, 2088, 2120
FaqI	GGGAC	2 cut(s)	2395, 2418
FauI	CCCGC	3 cut(s)	116, 356, 1818
FbaI	TGATCA	1 cut(s)	1045
FblI	GTMKAC	1 cut(s)	376
Fnu4HI	GCNGC	7 cut(s)	219, 782, 1068, 1612, 1814, 1855, 2201
FokI	GGATG	6 cut(s)	161, 182, 701, 1011, 1793, 2465
FriOI	GRGCYC	1 cut(s)	2222
Fsp4HI	GCNGC	7 cut(s)	219, 782, 1068, 1612, 1814, 1855, 2201
FspBI	CTAG	5 cut(s)	494, 1320, 1883, 1893, 2430
GlaI	GCGC	1 cut(s)	108
GluI	GCNGC	7 cut(s)	219, 782, 1068, 1612, 1814, 1855, 2201
GsaI	CCCAGC	3 cut(s)	2339, 2364, 2405
HaeIII	GGCC	4 cut(s)	407, 1797, 2234, 2340
HapII	CCGG	1 cut(s)	630
HhaI	GCGC	1 cut(s)	109
Hin6I	GCGC	1 cut(s)	107
HinP1I	GCGC	1 cut(s)	107
HincII	GTYRAC	4 cut(s)	377, 993, 1551, 2314
HindII	GTYRAC	4 cut(s)	377, 993, 1551, 2314
HindIII	AAGCTT	1 cut(s)	1998
HinfI	GANTC	6 cut(s)	206, 258, 353, 1132, 1282, 2383
HpaI	GTTAAC	1 cut(s)	2314
HpaII	CCGG	1 cut(s)	630
HphI	GGTGA	2 cut(s)	253, 925
Hpy99I	CGWCG	1 cut(s)	378
HpyAV	CCTTC	6 cut(s)	420, 730, 1057, 1536, 1865, 1940
HpyCH4IV	ACGT	3 cut(s)	1096, 1275, 1888
HpyF10VI	GCNNNNNNNGC	7 cut(s)	323, 408, 937, 956, 1507, 1803, 2161
HpyF3I	CTNAG	5 cut(s)	291, 1362, 1371, 1597, 2237
HpySE526I	ACGT	3 cut(s)	1096, 1275, 1888
HspAI	GCGC	1 cut(s)	107
Ksp22I	TGATCA	1 cut(s)	1045
KspAI	GTTAAC	1 cut(s)	2314
Kzo9I	GATC	6 cut(s)	126, 1045, 1300, 1874, 1949, 2468
LmnI	GCTCC	6 cut(s)	466, 778, 904, 1153, 2225, 2287
Lsp1109I	GCAGC	6 cut(s)	793, 1079, 1598, 1800, 1866, 2212
LweI	GCATC	7 cut(s)	160, 304, 688, 799, 1081, 1815, 1834
MabI	ACCWGGT	1 cut(s)	184
MaeI	CTAG	5 cut(s)	494, 1320, 1883, 1893, 2430
MaeII	ACGT	3 cut(s)	1096, 1275, 1888
MaeIII	GTNAC	5 cut(s)	343, 1097, 1249, 1693, 2303
MalI	GATC	6 cut(s)	128, 1047, 1302, 1876, 1951, 2470
MboI	GATC	6 cut(s)	126, 1045, 1300, 1874, 1949, 2468
MfeI	CAATTG	2 cut(s)	1479, 2408
MflI	RGATCY	1 cut(s)	2468
MhlI	GDGCHC	2 cut(s)	2222, 2257
MlsI	TGGCCA	1 cut(s)	1797
MluNI	TGGCCA	1 cut(s)	1797
MlyI	GAGTC	1 cut(s)	2377
MmeI	TCCRAC	2 cut(s)	4, 2443
Mox20I	TGGCCA	1 cut(s)	1797
Mph1103I	ATGCAT	1 cut(s)	417
MroXI	GAANNNNTTC	3 cut(s)	1083, 1131, 1385
MscI	TGGCCA	1 cut(s)	1797
MslI	CAYNNNNRTG	4 cut(s)	474, 519, 982, 1635
Msp20I	TGGCCA	1 cut(s)	1797
MspA1I	CMGCKG	1 cut(s)	1813
MspI	CCGG	1 cut(s)	630
MspR9I	CCNGG	3 cut(s)	186, 1699, 2318
MunI	CAATTG	2 cut(s)	1479, 2408
MvaI	CCWGG	3 cut(s)	186, 1699, 2318
MvnI	CGCG	1 cut(s)	334
MwoI	GCNNNNNNNGC	7 cut(s)	323, 408, 937, 956, 1507, 1803, 2161
NdeII	GATC	6 cut(s)	126, 1045, 1300, 1874, 1949, 2468
NlaIV	GGNNCC	3 cut(s)	90, 1317, 2289
NmuCI	GTSAC	1 cut(s)	1097
NruI	TCGCGA	1 cut(s)	334
NsiI	ATGCAT	1 cut(s)	417
NspI	RCATGY	4 cut(s)	330, 415, 419, 1568
NspV	TTCGAA	1 cut(s)	508
PaeI	GCATGC	2 cut(s)	415, 1568
PagI	TCATGA	3 cut(s)	451, 475, 2504
PdmI	GAANNNNTTC	3 cut(s)	1083, 1131, 1385
PfeI	GAWTC	5 cut(s)	206, 258, 353, 1132, 1282
PflMI	CCANNNNNTGG	1 cut(s)	191
PkrI	GCNGC	7 cut(s)	220, 783, 1069, 1613, 1815, 1856, 2202
PleI	GAGTC	1 cut(s)	2377
PpsI	GAGTC	1 cut(s)	2377
Ppu21I	YACGTR	1 cut(s)	1889
PsiI	TTATAA	2 cut(s)	831, 1971
Psp124BI	GAGCTC	1 cut(s)	2222
Psp6I	CCWGG	3 cut(s)	184, 1697, 2316
PspEI	GGTNACC	2 cut(s)	1249, 1693
PspFI	CCCAGC	3 cut(s)	2335, 2360, 2401
PspGI	CCWGG	3 cut(s)	184, 1697, 2316
PspN4I	GGNNCC	3 cut(s)	90, 1317, 2289
PspPI	GGNCC	2 cut(s)	2233, 2338
PstI	CTGCAG	1 cut(s)	2476
PstNI	CAGNNNCTG	2 cut(s)	356, 2335
PsuI	RGATCY	1 cut(s)	2468
RruI	TCGCGA	1 cut(s)	334
RsaI	GTAC	4 cut(s)	1357, 1748, 1887, 1891
RsaNI	GTAC	4 cut(s)	1356, 1747, 1886, 1890
RseI	CAYNNNNRTG	4 cut(s)	474, 519, 982, 1635
SacI	GAGCTC	1 cut(s)	2222
SalI	GTCGAC	1 cut(s)	375
SatI	GCNGC	7 cut(s)	219, 782, 1068, 1612, 1814, 1855, 2201
Sau3AI	GATC	6 cut(s)	126, 1045, 1300, 1874, 1949, 2468
Sau96I	GGNCC	2 cut(s)	2233, 2338
SchI	GAGTC	1 cut(s)	2377
ScrFI	CCNGG	3 cut(s)	186, 1699, 2318
SduI	GDGCHC	2 cut(s)	2222, 2257
SexAI	ACCWGGT	1 cut(s)	184
SfaNI	GCATC	7 cut(s)	160, 304, 688, 799, 1081, 1815, 1834
SfcI	CTRYAG	2 cut(s)	762, 2472
SfuI	TTCGAA	1 cut(s)	508
SmiMI	CAYNNNNRTG	4 cut(s)	474, 519, 982, 1635
SmlI	CTYRAG	2 cut(s)	702, 2050
SmoI	CTYRAG	2 cut(s)	702, 2050
SnaBI	TACGTA	1 cut(s)	1889
SphI	GCATGC	2 cut(s)	415, 1568
SsiI	CCGC	6 cut(s)	123, 218, 363, 1484, 1811, 2459
SspI	AATATT	2 cut(s)	1685, 1975
SspMI	CTAG	5 cut(s)	494, 1320, 1883, 1893, 2430
SstI	GAGCTC	1 cut(s)	2222
StyD4I	CCNGG	3 cut(s)	184, 1697, 2316
StyI	CCWWGG	1 cut(s)	1532
TaiI	ACGT	3 cut(s)	1099, 1278, 1891
TaqI	TCGA	4 cut(s)	376, 508, 604, 1743
TaqII	GACCGA	1 cut(s)	394
TatI	WGTACW	2 cut(s)	1355, 1746
TauI	GCSGC	1 cut(s)	221
TfiI	GAWTC	5 cut(s)	206, 258, 353, 1132, 1282
TscAI	CASTG	5 cut(s)	574, 1106, 1425, 1779, 2065
TseFI	GTSAC	1 cut(s)	1097
TseI	GCWGC	6 cut(s)	781, 1067, 1611, 1813, 1854, 2200
Tsp45I	GTSAC	1 cut(s)	1097
TspRI	CASTG	5 cut(s)	574, 1106, 1425, 1779, 2065
Van91I	CCANNNNNTGG	1 cut(s)	191
XceI	RCATGY	4 cut(s)	330, 415, 419, 1568
XmiI	GTMKAC	1 cut(s)	376
XmnI	GAANNNNTTC	3 cut(s)	1083, 1131, 1385
XspI	CTAG	5 cut(s)	494, 1320, 1883, 1893, 2430
Zsp2I	ATGCAT	1 cut(s)	417

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.