Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr9

Orthogroup ID

OG0006484

Physical Location & Seq

Genomic Coordinates Forward (+)

4475775 .. 4477082

Gene Structure 1308 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom09g06040.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1308 bp

ATGGATAGAAATCAAAATTTGGGTGAAACAGTGGTGGATGATCCAGAAAAAATGAGTGGTGGTGCAGTAAATGAAAATATGAATATGGTTGCTGTTGCGGAAGAAGTGCAGAATAGAGGTGGTGGAGTCATTACTTCTCCCGAGAAGGACGTTCAAGTGTTTGAGGGTGAAGCAGATTTTGAACCTTGTAATGGCATTGAATTCGAATCCCATGAGGCAGCATACTCATTTTATCAAGAATATGCTAAGTCTATGGGATTCACTACTTCAATCAAAAACAGCCGGCGCTCAAAGAAATCAAAGGAATTTATTGATGCCAAATTTGCATGTTCAAGATATGGAGTCACTCCAGAATCAGATAGTGGGACTAGTCGTCGACCAACTGTGAAAAAGACAGATTGCAAAGCCAGCATGCATGTGAAGAGAAGGGCAGATGGAAAGTGGATTATTCATGAATTCATAAAGGAGCATAATCATGAGCTTTTACCTGCTTTGGCATATCATTTTCGGATTCATAGGAATGTAAAGTTAGCTGAAAAGAATAATATTGACATTTTGCATGCAGTTAGTGAACGGACAAGAAAGATGTATGTTGAAATGTCTAGACACTCTGGTGGGTACCAAAGTACTGGGTTTCCTCAGGCTGACACAAACTATCAGTTTGATAAGTGCCGGGACTTGAGTCTGGATTTGGGAGATGCTCAGGTAATGCTTGAATACTTTAAGCGTATCCAGAAGGAGAATCCTAACTTCTTCTATGCTATAGATTTGAATGAAGAGCAGCGTCTGAGAAATTTGTTTTGGGTTGATGCAAAAAGTCGGAGTGATTACAAGAGTTTTAACGATGTTGTCTCTTTTGATACTTCTTACATCAAAATAAACGATAAGTTGCCATTTGCTCCTTTTGTTGGGGTGAACAACCACTTTCAGTCAATGTTGCTTGGTTGTGCATTGGTGGCTGATGATACAAAATCAACATTTGTATGGTTGTTGAAGACATGGCTTAGAGCAATGGGTGGGCAAGGTCCTAAAGTGATTATCACTGATCAGGACCAAACCCTGAAGGCAGCAATTGGCGAAGTCTTTCCAGATGCACGTCACTGCTTTTCACTTTGGAGTATACTGGAAAAGATCCCTGAAACTCTTGCTCATGTAATCAAACGGCATGACAATTTCCTGTCTAAGTTTAACGAATGCATTTTCAAGTCCTCGACAGATGAACAGTTTGTCCTTAGATGGTGGGAGATGGTTAATAGTTTTGAACTTCAAGATGACGAATGGATCCGATTGCTGTATGATCGATCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007602 GO:0008150 GO:0009314 GO:0009416 GO:0009581 GO:0009582 GO:0009583 GO:0009585 GO:0009605 GO:0009628 GO:0009639 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010017 GO:0010018 GO:0010218 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042752 GO:0042753 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051606 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0071490 GO:0080090 GO:0104004 GO:0140110 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAR1 MULE SWIM

Protein Analysis

436

Amino Acids

50.23

Weight (kDa)

6.05

Isoelectric Point (pI)

47.07

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAR1	PF03101	76 - 163	1.7e-29	FAR1 DNA-binding domain
ZSWIM1-3_RNaseH-like	PF21056	246 - 366	4.5e-08	Zinc finger SWIM domain-containing protein 1/3, RNaseH-like domain
MULE	PF10551	283 - 376	2.5e-22	MULE transposase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006484)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G15090 AT4G15090 AT4G15090 AT4G15090 AT4G15090
fragaria_vesca	FvH4_6g39512 FvH4_6g39512 FvH4_6g39512
malus_domestica	MD09G1139600.v1.1
prunus_persica	Prupe.3G186100_v2.0.a1 Prupe.3G186100_v2.0.a1 Prupe.3G186100_v2.0.a1 Prupe.3G186100_v2.0.a1
pyrus_communis	pycom09g06040
rosa_chinensis	RchiOBHm_Chr2g0153561
rosa_multiflora	Rmu_sc0002290.1_g000008 Rmu_sc0005507.1_g000038 Rmu_sc0017289.1_g000001
rosa_roxburghii	Rroxscaffold_2G00094920 Rroxscaffold_2G00134860
rosa_rugosa	Rorug02G0440100
rosa_samantha	Rh2AG503300 Rh2BG514000 Rh2CG489100 Rh2DG525700
rosa_wichuraiana	Rw2G041320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	496
Acc65I	GGTACC	1 cut(s)	618
AccB1I	GGYRCC	1 cut(s)	618
AccI	GTMKAC	2 cut(s)	376, 1120
AciI	CCGC	1 cut(s)	98
AclWI	GGATC	4 cut(s)	35, 1126, 1276, 1289
AcsI	RAATTY	6 cut(s)	16, 200, 305, 320, 455, 793
AcuI	CTGAAG	1 cut(s)	1082
AfaI	GTAC	2 cut(s)	620, 628
AfiI	CCNNNNNNNGG	2 cut(s)	191, 908
AhdI	GACNNNNNGTC	1 cut(s)	372
AhlI	ACTAGT	1 cut(s)	368
AjiI	CACGTC	1 cut(s)	1097
AjuI	GAANNNNNNNTTGG	2 cut(s)	784, 816
AleI	CACNNNNGTG	1 cut(s)	612
AloI	GAACNNNNNNTCC	2 cut(s)	1212, 1244
AluBI	AGCT	2 cut(s)	481, 533
AluI	AGCT	2 cut(s)	481, 533
Alw26I	GTCTC	1 cut(s)	856
AlwI	GGATC	4 cut(s)	35, 1126, 1276, 1289
AlwNI	CAGNNNCTG	1 cut(s)	787
Ama87I	CYCGRG	1 cut(s)	140
ApeKI	GCWGC	3 cut(s)	218, 781, 1067
ApoI	RAATTY	6 cut(s)	16, 200, 305, 320, 455, 793
Asp700I	GAANNNNTTC	1 cut(s)	1083
Asp718I	GGTACC	1 cut(s)	618
AspLEI	GCGC	1 cut(s)	288
AspS9I	GGNCC	2 cut(s)	1025, 1051
AsuC2I	CCSGG	1 cut(s)	674
AsuHPI	GGTGA	3 cut(s)	35, 179, 925
AsuII	TTCGAA	1 cut(s)	204
AvaI	CYCGRG	1 cut(s)	140
AvaII	GGWCC	2 cut(s)	1025, 1051
AxyI	CCTNAGG	1 cut(s)	639
BaeI	ACNNNNGTAYC	2 cut(s)	610, 643
BamHI	GGATCC	1 cut(s)	1281
BanI	GGYRCC	1 cut(s)	618
BbsI	GAAGAC	1 cut(s)	1001
BbvI	GCAGC	3 cut(s)	230, 793, 1079
BccI	CCATC	3 cut(s)	428, 1230, 1240
BceAI	ACGGC	1 cut(s)	1178
BcgI	CGANNNNNNTGC	2 cut(s)	184, 218
BciVI	GTATCC	1 cut(s)	740
BclI	TGATCA	1 cut(s)	1045
BcnI	CCSGG	1 cut(s)	674
BcoDI	GTCTC	1 cut(s)	856
BcuI	ACTAGT	1 cut(s)	368
BfaI	CTAG	2 cut(s)	369, 603
BfmI	CTRYAG	1 cut(s)	762
BfoI	RGCGCY	1 cut(s)	289
BfuAI	ACCTGC	1 cut(s)	496
BfuI	GTATCC	1 cut(s)	740
BisI	GCNGC	3 cut(s)	219, 782, 1068
BlsI	GCNGC	3 cut(s)	220, 783, 1069
BmcAI	AGTACT	1 cut(s)	628
Bme1390I	CCNGG	1 cut(s)	674
Bme18I	GGWCC	2 cut(s)	1025, 1051
BmeRI	GACNNNNNGTC	1 cut(s)	372
BmeT110I	CYCGRG	1 cut(s)	140
BmgBI	CACGTC	1 cut(s)	1097
BmgT120I	GGNCC	2 cut(s)	1025, 1051
BmiI	GGNNCC	2 cut(s)	620, 1283
BmrFI	CCNGG	1 cut(s)	674
BmrI	ACTGGG	1 cut(s)	639
BmsI	GCATC	4 cut(s)	304, 688, 799, 1081
BmuI	ACTGGG	1 cut(s)	639
BoxI	GACNNNNGTC	1 cut(s)	681
BpiI	GAAGAC	1 cut(s)	1001
BpmI	CTGGAG	1 cut(s)	333
Bpu10I	CCTNAGC	1 cut(s)	702
Bpu14I	TTCGAA	1 cut(s)	204
BpuEI	CTTGAG	1 cut(s)	700
BpuMI	CCSGG	1 cut(s)	674
Bsa29I	ATCGAT	1 cut(s)	1300
BsaBI	GATNNNNATC	1 cut(s)	9
Bsc4I	CCNNNNNNNGG	2 cut(s)	191, 908
Bse118I	RCCGGY	1 cut(s)	282
Bse1I	ACTGG	2 cut(s)	634, 1128
Bse21I	CCTNAGG	1 cut(s)	639
Bse3DI	GCAATG	1 cut(s)	1017
Bse8I	GATNNNNATC	1 cut(s)	9
BseCI	ATCGAT	1 cut(s)	1300
BseGI	GGATG	1 cut(s)	43
BseJI	GATNNNNATC	1 cut(s)	9
BseLI	CCNNNNNNNGG	2 cut(s)	191, 908
BseMI	GCAATG	1 cut(s)	1017
BseMII	CTCAG	3 cut(s)	653, 716, 779
BseNI	ACTGG	2 cut(s)	634, 1128
BseXI	GCAGC	3 cut(s)	230, 793, 1079
BsgI	GTGCAG	2 cut(s)	84, 128
Bsh1285I	CGRYCG	1 cut(s)	1304
BshNI	GGYRCC	1 cut(s)	618
BshVI	ATCGAT	1 cut(s)	1300
BsiEI	CGRYCG	1 cut(s)	1304
BsiHKCI	CYCGRG	1 cut(s)	140
BsiSI	CCGG	2 cut(s)	283, 673
BslFI	GGGAC	2 cut(s)	379, 689
BslI	CCNNNNNNNGG	2 cut(s)	191, 908
BsmAI	GTCTC	1 cut(s)	856
BsmFI	GGGAC	2 cut(s)	379, 689
BsmI	GAATGC	1 cut(s)	1199
BsoBI	CYCGRG	1 cut(s)	140
Bsp119I	TTCGAA	1 cut(s)	204
Bsp143I	GATC	6 cut(s)	40, 1045, 1131, 1281, 1297, 1301
BspACI	CCGC	1 cut(s)	98
BspCNI	CTCAG	3 cut(s)	652, 715, 780
BspDI	ATCGAT	1 cut(s)	1300
BspHI	TCATGA	2 cut(s)	451, 475
BspLI	GGNNCC	2 cut(s)	620, 1283
BspMI	ACCTGC	1 cut(s)	496
BspPI	GGATC	4 cut(s)	35, 1126, 1276, 1289
BspQI	GCTCTTC	1 cut(s)	771
BspT104I	TTCGAA	1 cut(s)	204
BspT107I	GGYRCC	1 cut(s)	618
BsrDI	GCAATG	1 cut(s)	1017
BsrFI	RCCGGY	1 cut(s)	282
BsrI	ACTGG	2 cut(s)	634, 1128
BssAI	RCCGGY	1 cut(s)	282
BssMI	GATC	6 cut(s)	40, 1045, 1131, 1281, 1297, 1301
BssNAI	GTATAC	1 cut(s)	1121
Bst1107I	GTATAC	1 cut(s)	1121
Bst4CI	ACNGT	3 cut(s)	31, 385, 1224
Bst6I	CTCTTC	2 cut(s)	416, 771
BstBI	TTCGAA	1 cut(s)	204
BstC8I	GCNNGC	4 cut(s)	284, 409, 413, 561
BstDEI	CTNAG	7 cut(s)	246, 639, 702, 788, 1004, 1182, 1232
BstF5I	GGATG	1 cut(s)	43
BstH2I	RGCGCY	1 cut(s)	289
BstHHI	GCGC	1 cut(s)	288
BstKTI	GATC	6 cut(s)	43, 1048, 1134, 1284, 1300, 1304
BstMAI	GTCTC	1 cut(s)	856
BstMBI	GATC	6 cut(s)	40, 1045, 1131, 1281, 1297, 1301
BstMCI	CGRYCG	1 cut(s)	1304
BstMWI	GCNNNNNNNGC	3 cut(s)	323, 408, 956
BstNSI	RCATGY	4 cut(s)	330, 415, 419, 563
BstPAI	GACNNNNGTC	1 cut(s)	681
BstSCI	CCNGG	1 cut(s)	672
BstSFI	CTRYAG	1 cut(s)	762
BstV1I	GCAGC	3 cut(s)	230, 793, 1079
BstV2I	GAAGAC	1 cut(s)	1001
BstX2I	RGATCY	2 cut(s)	1131, 1281
BstXI	CCANNNNNNTGG	1 cut(s)	629
BstYI	RGATCY	2 cut(s)	1131, 1281
BstZ17I	GTATAC	1 cut(s)	1121
Bsu15I	ATCGAT	1 cut(s)	1300
Bsu36I	CCTNAGG	1 cut(s)	639
BsuI	GTATCC	1 cut(s)	740
BsuTUI	ATCGAT	1 cut(s)	1300
BtrI	CACGTC	1 cut(s)	1097
BtsCI	GGATG	1 cut(s)	43
BtsI	GCAGTG	1 cut(s)	1099
BtsIMutI	CAGTG	3 cut(s)	36, 1041, 1099
BveI	ACCTGC	1 cut(s)	496
Cac8I	GCNNGC	4 cut(s)	284, 409, 413, 561
CaiI	CAGNNNCTG	1 cut(s)	787
CciI	TCATGA	2 cut(s)	451, 475
CfoI	GCGC	1 cut(s)	288
Cfr10I	RCCGGY	1 cut(s)	282
Cfr13I	GGNCC	2 cut(s)	1025, 1051
ClaI	ATCGAT	1 cut(s)	1300
CseI	GACGC	1 cut(s)	773
Csp6I	GTAC	2 cut(s)	619, 627
CviJI	RGCY	7 cut(s)	282, 407, 481, 533, 644, 959, 1003
CviKI_1	RGCY	7 cut(s)	282, 407, 481, 533, 644, 959, 1003
CviQI	GTAC	2 cut(s)	619, 627
DdeI	CTNAG	7 cut(s)	246, 639, 702, 788, 1004, 1182, 1232
DpnI	GATC	6 cut(s)	42, 1047, 1133, 1283, 1299, 1303
DpnII	GATC	6 cut(s)	40, 1045, 1131, 1281, 1297, 1301
DriI	GACNNNNNGTC	1 cut(s)	372
Eam1104I	CTCTTC	2 cut(s)	416, 771
Eam1105I	GACNNNNNGTC	1 cut(s)	372
EarI	CTCTTC	2 cut(s)	416, 771
Eco47I	GGWCC	2 cut(s)	1025, 1051
Eco57I	CTGAAG	1 cut(s)	1082
Eco81I	CCTNAGG	1 cut(s)	639
Eco88I	CYCGRG	1 cut(s)	140
EcoO109I	RGGNCCY	1 cut(s)	1025
EcoRI	GAATTC	2 cut(s)	200, 455
EcoT22I	ATGCAT	2 cut(s)	417, 1199
FaqI	GGGAC	2 cut(s)	379, 689
FbaI	TGATCA	1 cut(s)	1045
FblI	GTMKAC	2 cut(s)	376, 1120
Fnu4HI	GCNGC	3 cut(s)	219, 782, 1068
FokI	GGATG	1 cut(s)	50
Fsp4HI	GCNGC	3 cut(s)	219, 782, 1068
FspBI	CTAG	2 cut(s)	369, 603
GlaI	GCGC	1 cut(s)	287
GluI	GCNGC	3 cut(s)	219, 782, 1068
GsuI	CTGGAG	1 cut(s)	333
HaeII	RGCGCY	1 cut(s)	289
HapII	CCGG	2 cut(s)	283, 673
HgaI	GACGC	1 cut(s)	773
HhaI	GCGC	1 cut(s)	288
Hin6I	GCGC	1 cut(s)	286
HinP1I	GCGC	1 cut(s)	286
HincII	GTYRAC	1 cut(s)	377
HindII	GTYRAC	1 cut(s)	377
HinfI	GANTC	8 cut(s)	126, 206, 258, 342, 353, 511, 682, 742
HpaII	CCGG	2 cut(s)	283, 673
HphI	GGTGA	3 cut(s)	35, 179, 925
Hpy166II	GTNNAC	4 cut(s)	377, 572, 916, 1121
Hpy188I	TCNGA	5 cut(s)	358, 510, 789, 822, 1286
Hpy8I	GTNNAC	4 cut(s)	377, 572, 916, 1121
Hpy99I	CGWCG	1 cut(s)	378
HpyAV	CCTTC	4 cut(s)	139, 420, 730, 1057
HpyCH4III	ACNGT	3 cut(s)	31, 385, 1224
HpyCH4IV	ACGT	2 cut(s)	150, 1096
HpyF10VI	GCNNNNNNNGC	3 cut(s)	323, 408, 956
HpyF3I	CTNAG	7 cut(s)	246, 639, 702, 788, 1004, 1182, 1232
HpySE526I	ACGT	2 cut(s)	150, 1096
HspAI	GCGC	1 cut(s)	286
KpnI	GGTACC	1 cut(s)	622
KroI	GCCGGC	1 cut(s)	282
KroNI	GCCGGC	1 cut(s)	284
Ksp22I	TGATCA	1 cut(s)	1045
Kzo9I	GATC	6 cut(s)	40, 1045, 1131, 1281, 1297, 1301
LguI	GCTCTTC	1 cut(s)	771
LmnI	GCTCC	2 cut(s)	466, 904
Lsp1109I	GCAGC	3 cut(s)	230, 793, 1079
LweI	GCATC	4 cut(s)	304, 688, 799, 1081
MaeI	CTAG	2 cut(s)	369, 603
MaeII	ACGT	2 cut(s)	150, 1096
MaeIII	GTNAC	2 cut(s)	343, 1097
MalI	GATC	6 cut(s)	42, 1047, 1133, 1283, 1299, 1303
MboI	GATC	6 cut(s)	40, 1045, 1131, 1281, 1297, 1301
MboII	GAAGA	5 cut(s)	113, 433, 745, 788, 1006
MfeI	CAATTG	1 cut(s)	1071
MflI	RGATCY	2 cut(s)	1131, 1281
MluCI	AATT	8 cut(s)	16, 200, 305, 320, 455, 793, 1071, 1171
MlyI	GAGTC	3 cut(s)	135, 351, 691
MmeI	TCCRAC	1 cut(s)	800
MnlI	CCTC	5 cut(s)	110, 157, 208, 648, 1219
Mph1103I	ATGCAT	2 cut(s)	417, 1199
MroNI	GCCGGC	1 cut(s)	282
MroXI	GAANNNNTTC	1 cut(s)	1083
MseI	TTAA	4 cut(s)	723, 840, 1188, 1251
MslI	CAYNNNNRTG	5 cut(s)	416, 474, 519, 612, 982
MspI	CCGG	2 cut(s)	283, 673
MspR9I	CCNGG	1 cut(s)	674
MunI	CAATTG	1 cut(s)	1071
Mva1269I	GAATGC	1 cut(s)	1199
MwoI	GCNNNNNNNGC	3 cut(s)	323, 408, 956
NaeI	GCCGGC	1 cut(s)	284
NciI	CCSGG	1 cut(s)	674
NdeII	GATC	6 cut(s)	40, 1045, 1131, 1281, 1297, 1301
NgoMIV	GCCGGC	1 cut(s)	282
NlaIV	GGNNCC	2 cut(s)	620, 1283
NmuCI	GTSAC	2 cut(s)	343, 1097
NsiI	ATGCAT	2 cut(s)	417, 1199
NspI	RCATGY	4 cut(s)	330, 415, 419, 563
NspV	TTCGAA	1 cut(s)	204
OliI	CACNNNNGTG	1 cut(s)	612
PaeI	GCATGC	2 cut(s)	415, 563
PagI	TCATGA	2 cut(s)	451, 475
PciSI	GCTCTTC	1 cut(s)	771
PctI	GAATGC	1 cut(s)	1199
PdiI	GCCGGC	1 cut(s)	284
PdmI	GAANNNNTTC	1 cut(s)	1083
PfeI	GAWTC	5 cut(s)	206, 258, 353, 511, 742
PkrI	GCNGC	3 cut(s)	220, 783, 1069
Ple19I	CGATCG	1 cut(s)	1304
PleI	GAGTC	3 cut(s)	134, 350, 690
PpsI	GAGTC	3 cut(s)	134, 350, 690
PpuMI	RGGWCCY	1 cut(s)	1025
PshAI	GACNNNNGTC	1 cut(s)	681
Psp5II	RGGWCCY	1 cut(s)	1025
PspN4I	GGNNCC	2 cut(s)	620, 1283
PspPI	GGNCC	2 cut(s)	1025, 1051
PspPPI	RGGWCCY	1 cut(s)	1025
PstNI	CAGNNNCTG	1 cut(s)	787
PsuI	RGATCY	2 cut(s)	1131, 1281
PvuI	CGATCG	1 cut(s)	1304
RsaI	GTAC	2 cut(s)	620, 628
RsaNI	GTAC	2 cut(s)	619, 627
RseI	CAYNNNNRTG	5 cut(s)	416, 474, 519, 612, 982
SalI	GTCGAC	1 cut(s)	375
SapI	GCTCTTC	1 cut(s)	771
SaqAI	TTAA	4 cut(s)	723, 840, 1188, 1251
SatI	GCNGC	3 cut(s)	219, 782, 1068
Sau3AI	GATC	6 cut(s)	40, 1045, 1131, 1281, 1297, 1301
Sau96I	GGNCC	2 cut(s)	1025, 1051
ScaI	AGTACT	1 cut(s)	628
SchI	GAGTC	3 cut(s)	135, 351, 691
ScrFI	CCNGG	1 cut(s)	674
SetI	ASST	9 cut(s)	121, 153, 187, 483, 490, 535, 708, 1027, 1099
SfaNI	GCATC	4 cut(s)	304, 688, 799, 1081
SfcI	CTRYAG	1 cut(s)	762
SfuI	TTCGAA	1 cut(s)	204
SinI	GGWCC	2 cut(s)	1025, 1051
SmiMI	CAYNNNNRTG	5 cut(s)	416, 474, 519, 612, 982
SmlI	CTYRAG	1 cut(s)	679
SmoI	CTYRAG	1 cut(s)	679
SpeI	ACTAGT	1 cut(s)	368
SphI	GCATGC	2 cut(s)	415, 563
Sse9I	AATT	8 cut(s)	16, 200, 305, 320, 455, 793, 1071, 1171
SsiI	CCGC	1 cut(s)	98
SspI	AATATT	1 cut(s)	547
SspMI	CTAG	2 cut(s)	369, 603
StyD4I	CCNGG	1 cut(s)	672
TaaI	ACNGT	3 cut(s)	31, 385, 1224
TaiI	ACGT	2 cut(s)	153, 1099
TaqI	TCGA	4 cut(s)	204, 376, 1211, 1300
TasI	AATT	8 cut(s)	16, 200, 305, 320, 455, 793, 1071, 1171
TatI	WGTACW	1 cut(s)	626
TfiI	GAWTC	5 cut(s)	206, 258, 353, 511, 742
Tru1I	TTAA	4 cut(s)	723, 840, 1188, 1251
Tru9I	TTAA	4 cut(s)	723, 840, 1188, 1251
TscAI	CASTG	3 cut(s)	36, 1048, 1106
TseFI	GTSAC	2 cut(s)	343, 1097
TseI	GCWGC	3 cut(s)	218, 781, 1067
Tsp45I	GTSAC	2 cut(s)	343, 1097
TspDTI	ATGAA	8 cut(s)	87, 95, 440, 448, 468, 503, 789, 1233
TspGWI	ACGGA	1 cut(s)	589
TspRI	CASTG	3 cut(s)	36, 1048, 1106
VpaK11BI	GGWCC	2 cut(s)	1025, 1051
XapI	RAATTY	6 cut(s)	16, 200, 305, 320, 455, 793
XbaI	TCTAGA	1 cut(s)	602
XceI	RCATGY	4 cut(s)	330, 415, 419, 563
XmiI	GTMKAC	2 cut(s)	376, 1120
XmnI	GAANNNNTTC	1 cut(s)	1083
XspI	CTAG	2 cut(s)	369, 603
ZrmI	AGTACT	1 cut(s)	628
Zsp2I	ATGCAT	2 cut(s)	417, 1199

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.