Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0017289.1

Orthogroup ID

OG0006484

Physical Location & Seq

Genomic Coordinates Reverse (-)

772 .. 4203

Gene Structure 3432 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0017289.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2481 bp

atgttggtggacggtcaagacaatatgaatgatggtagggtaaatgagaatatgaatatggttcctcttgtggaagaagcgcaaaatagtggtggcgggatcatcggttctcctaaaagggatgttcaagtgtttgagggggatgcagattttgaaccgtgtaatggcattgaatttgattcacatgaggcggcatactcattttatcaagaatatgccaagtccatgggattcaccacatcaataaaaaacagtcggcgttctaagaaatcaaaagaatttattgatgccaaatttgcgtgttcgcgatatggagttacaccagaatctgatagcgggagtagtcgtcgaccgactgtgaaaaagacagactgcaaggccagcatgcatgtcaagagaagggcagatggaaagtggattattcatgaattcattaaggagcataatcatgagcttttacctgctctagcatatcattttcggattcataggaatgtgaagttagctgaaaagaataatatggacatcttgcaagcagtcagtgaacgaactagaaagatgtatgttgagatgtctcgacaatctggtggatatcaatataccggctttcttcggactgacacaaagtatcagtttgataaatgcctgcatttaggtctggatgagggagatgctcaagtaatgcttgaatactttaagcgtatccagaaggacaaccccaacttcttctatgctatagatttgaatgaggagcagcgtgtgagaaatttgttctgggttgatgcaaaaagtaggagtgattataagagttttaacgatgttgtctcttttgacacctcttacatcaaaatcaatgaaaagttgccatttgctccttttgttggggtgaaccaccactttcagccaatgttgcttggttgtgcgttaatttcagacgacagtaaagcaacatttttatggttgttgacaacatgggttagagcaatgggtgggctacatcctaaagtgattatctctgatcaagacgataacttgaaggcagccattgaagaagtctttcaagatgcacgtcactgcttttcactttggaacatattggaaaagattcctgaagttcttgctcctgtaatcaaacagcatgagaatttcttgccaaagtttcacaagtgcatttttaagtcatggacagaagaacactttgacatgagatggtggaaaatggttaccagatttgaacttcaagatgacgtattgattcgttcgctgtatgatgatcgtaaaagatgggtgcctagttatttgggagatacttttttagctggaatgtgtacaactcagcgttctgagagtatgaactctttctttgacaaattcatacacaagaaaattacactgaaagagtttgtgaaacaatatgggacaattctacaaaataggtatgatgaggaagcaattgcggattttgatacatggcacaaacagcctgcattaaagtctccttctccttgggaaaaacaaatgtcaacagtttacacgcatgcagtattcagaaagtttcaagttgaggtcttaggtgtagttggctgccagccaaagaaagaacatgaagatggatcaactgccacattcagagttcaagactgtgaaaaggaagaatattttatggtaacctggactgaaacaaagtcagaggtttcttgttcctgtcgtatgttcgagtacaaaggtttcctttgcagacattcactgattgttctccaaatttgtggcctttcaagcatcccgctgcattatattttgaagaggtggacaaaagatgcaaaaagcagccaatcgatccttgaaggatcagagctagtacgtactagggtgcaacgctacaatgatttatgtaaacgagccattgaattgagtgaagaaggatcattatctgaagagacttataatattgcttttcgcacactcgtagaagctttgaagaactgtgtgaatgtaaataactctaatgcaactgttgtggacttgagtagcagtgttcacggtattcgtgaagcagaagaagaaaatcaaggaagccttactgcaaaaccaagtaggaagagaaatacaaataggaaaagaaaggtgcaagcagagcaagatgtcattcttggcgaagcacaagacagcttgcagcaaatggaaaatttgagctccgatggtatggcccttagtggatattatggtgctcagcatggactggtgcagttaaacttaatggagccaccccatgacagttactatgttaaccaggaaagtatgcaggggctgggccaactgaattcaatagcacccagcgatgatggtttttttgggactcaacaaattcatgggctgggacaattggacttccgaccatcatctagtttcagttatagcttacaggatgaaccgcatttgagatctgcagagttgcatggcagttcttcaagacattcatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007154 GO:0007165 GO:0007602 GO:0008150 GO:0009314 GO:0009416 GO:0009581 GO:0009582 GO:0009583 GO:0009585 GO:0009605 GO:0009628 GO:0009639 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010017 GO:0010018 GO:0010218 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0019219 GO:0019222 GO:0023052 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0042752 GO:0042753 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0045893 GO:0045935 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051606 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0071490 GO:0080090 GO:0104004 GO:0140110 GO:1902680 GO:1903506 GO:1903508 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FAR1 MULE SWIM

Protein Analysis

826

Amino Acids

95.06

Weight (kDa)

6.3

Isoelectric Point (pI)

54.66

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006484)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G15090 AT4G15090 AT4G15090 AT4G15090 AT4G15090
fragaria_vesca	FvH4_6g39512 FvH4_6g39512 FvH4_6g39512
malus_domestica	MD09G1139600.v1.1
prunus_persica	Prupe.3G186100_v2.0.a1 Prupe.3G186100_v2.0.a1 Prupe.3G186100_v2.0.a1 Prupe.3G186100_v2.0.a1
pyrus_communis	pycom09g06040
rosa_chinensis	RchiOBHm_Chr2g0153561
rosa_multiflora	Rmu_sc0002290.1_g000008 Rmu_sc0005507.1_g000038 Rmu_sc0017289.1_g000001
rosa_roxburghii	Rroxscaffold_2G00094920 Rroxscaffold_2G00134860
rosa_rugosa	Rorug02G0440100
rosa_samantha	Rh2AG503300 Rh2BG514000 Rh2CG489100 Rh2DG525700
rosa_wichuraiana	Rw2G041320

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	804, 1944
Acc36I	ACCTGC	1 cut(s)	469
AccB1I	GGYRCC	1 cut(s)	1288
AccI	GTMKAC	1 cut(s)	349
AccII	CGCG	1 cut(s)	307
AciI	CCGC	6 cut(s)	96, 191, 336, 1457, 1784, 2432
AclWI	GGATC	5 cut(s)	107, 1621, 1831, 1855, 1930
AcuI	CTGAAG	2 cut(s)	1131, 1953
AfaI	GTAC	4 cut(s)	1330, 1721, 1860, 1864
AfiI	CCNNNNNNNGG	2 cut(s)	164, 881
AjiI	CACGTC	1 cut(s)	1070
AjnI	CCWGG	2 cut(s)	1670, 2289
AloI	GAACNNNNNNTCC	2 cut(s)	91, 123
AluBI	AGCT	8 cut(s)	454, 506, 1319, 1855, 1973, 2169, 2193, 2418
AluI	AGCT	8 cut(s)	454, 506, 1319, 1855, 1973, 2169, 2193, 2418
Alw21I	GWGCWC	2 cut(s)	2195, 2230
Alw26I	GTCTC	4 cut(s)	579, 829, 1500, 1931
AlwI	GGATC	5 cut(s)	107, 1621, 1831, 1855, 1930
AlwNI	CAGNNNCTG	2 cut(s)	329, 2308
AoxI	GGCC	4 cut(s)	378, 1768, 2205, 2311
ApeKI	GCWGC	6 cut(s)	754, 1040, 1584, 1786, 1827, 2173
Asp700I	GAANNNNTTC	3 cut(s)	1056, 1104, 1358
AspLEI	GCGC	1 cut(s)	82
AspS9I	GGNCC	2 cut(s)	2206, 2311
AsuHPI	GGTGA	2 cut(s)	226, 898
BanI	GGYRCC	1 cut(s)	1288
BanII	GRGCYC	1 cut(s)	2195
Bbv12I	GWGCWC	2 cut(s)	2195, 2230
BbvI	GCAGC	6 cut(s)	766, 1052, 1571, 1773, 1839, 2185
BccI	CCATC	8 cut(s)	26, 401, 1203, 1278, 1604, 2192, 2336, 2404
BciT130I	CCWGG	2 cut(s)	1672, 2291
BciVI	GTATCC	1 cut(s)	713
BclI	TGATCA	1 cut(s)	1018
BcoDI	GTCTC	4 cut(s)	579, 829, 1500, 1931
BfaI	CTAG	6 cut(s)	467, 552, 1293, 1856, 1866, 2403
BfmI	CTRYAG	2 cut(s)	735, 2445
BfuAI	ACCTGC	1 cut(s)	469
BfuI	GTATCC	1 cut(s)	713
BglII	AGATCT	1 cut(s)	2441
BisI	GCNGC	7 cut(s)	192, 755, 1041, 1585, 1787, 1828, 2174
BlpI	GCTNAGC	1 cut(s)	2229
BlsI	GCNGC	7 cut(s)	193, 756, 1042, 1586, 1788, 1829, 2175
Bme1390I	CCNGG	2 cut(s)	1672, 2291
BmgBI	CACGTC	1 cut(s)	1070
BmgT120I	GGNCC	2 cut(s)	2206, 2311
BmiI	GGNNCC	3 cut(s)	63, 1290, 2262
BmrFI	CCNGG	2 cut(s)	1672, 2291
BmsI	GCATC	7 cut(s)	133, 277, 661, 772, 1054, 1788, 1807
Bpu1102I	GCTNAGC	1 cut(s)	2229
BpuEI	CTTGAG	2 cut(s)	660, 2044
Bsa29I	ATCGAT	1 cut(s)	1835
BsaAI	YACGTR	1 cut(s)	1862
BsaBI	GATNNNNATC	1 cut(s)	1927
BsaJI	CCNNGG	2 cut(s)	225, 1505
BsaXI	ACNNNNNCTCC	2 cut(s)	331, 361
Bsc4I	CCNNNNNNNGG	2 cut(s)	164, 881
Bse118I	RCCGGY	1 cut(s)	602
Bse1I	ACTGG	1 cut(s)	2244
Bse3DI	GCAATG	1 cut(s)	990
Bse8I	GATNNNNATC	1 cut(s)	1927
BseBI	CCWGG	2 cut(s)	1672, 2291
BseCI	ATCGAT	1 cut(s)	1835
BseDI	CCNNGG	2 cut(s)	225, 1505
BseGI	GGATG	6 cut(s)	127, 148, 667, 997, 1779, 2431
BseJI	GATNNNNATC	1 cut(s)	1927
BseLI	CCNNNNNNNGG	2 cut(s)	164, 881
BseMI	GCAATG	1 cut(s)	990
BseMII	CTCAG	3 cut(s)	1335, 1349, 2243
BseNI	ACTGG	1 cut(s)	2244
BseRI	GAGGAG	1 cut(s)	764
BseXI	GCAGC	6 cut(s)	766, 1052, 1571, 1773, 1839, 2185
BseYI	CCCAGC	3 cut(s)	2308, 2333, 2374
BsgI	GTGCAG	1 cut(s)	2264
Bsh1236I	CGCG	1 cut(s)	307
Bsh1285I	CGRYCG	1 cut(s)	353
BshFI	GGCC	4 cut(s)	380, 1770, 2207, 2313
BshNI	GGYRCC	1 cut(s)	1288
BshVI	ATCGAT	1 cut(s)	1835
BsiEI	CGRYCG	1 cut(s)	353
BsiHKAI	GWGCWC	2 cut(s)	2195, 2230
BsiSI	CCGG	1 cut(s)	603
BslFI	GGGAC	3 cut(s)	1432, 2368, 2391
BslI	CCNNNNNNNGG	2 cut(s)	164, 881
BsmAI	GTCTC	4 cut(s)	579, 829, 1500, 1931
BsmFI	GGGAC	3 cut(s)	1432, 2368, 2391
BsnI	GGCC	4 cut(s)	380, 1770, 2207, 2313
Bsp1286I	GDGCHC	2 cut(s)	2195, 2230
Bsp1407I	TGTACA	1 cut(s)	1328
Bsp143I	GATC	8 cut(s)	99, 1018, 1273, 1613, 1836, 1847, 1922, 2441
Bsp1720I	GCTNAGC	1 cut(s)	2229
Bsp19I	CCATGG	1 cut(s)	225
Bsp68I	TCGCGA	1 cut(s)	307
BspACI	CCGC	6 cut(s)	96, 191, 336, 1457, 1784, 2432
BspANI	GGCC	4 cut(s)	380, 1770, 2207, 2313
BspCNI	CTCAG	3 cut(s)	1336, 1348, 2242
BspDI	ATCGAT	1 cut(s)	1835
BspFNI	CGCG	1 cut(s)	307
BspHI	TCATGA	3 cut(s)	424, 448, 2477
BspLI	GGNNCC	3 cut(s)	63, 1290, 2262
BspMAI	CTGCAG	1 cut(s)	2449
BspMI	ACCTGC	1 cut(s)	469
BspPI	GGATC	5 cut(s)	107, 1621, 1831, 1855, 1930
BspT107I	GGYRCC	1 cut(s)	1288
BsrDI	GCAATG	1 cut(s)	990
BsrFI	RCCGGY	1 cut(s)	602
BsrGI	TGTACA	1 cut(s)	1328
BsrI	ACTGG	1 cut(s)	2244
BssAI	RCCGGY	1 cut(s)	602
BssECI	CCNNGG	2 cut(s)	225, 1505
BssMI	GATC	8 cut(s)	99, 1018, 1273, 1613, 1836, 1847, 1922, 2441
BssT1I	CCWWGG	2 cut(s)	225, 1505
Bst2UI	CCWGG	2 cut(s)	1672, 2291
Bst6I	CTCTTC	3 cut(s)	1796, 1929, 2093
BstAUI	TGTACA	1 cut(s)	1328
BstBAI	YACGTR	1 cut(s)	1862
BstC8I	GCNNGC	9 cut(s)	382, 386, 534, 647, 1485, 1539, 1589, 2130, 2171
BstDEI	CTNAG	6 cut(s)	264, 1335, 1344, 1570, 2210, 2229
BstDSI	CCRYGG	1 cut(s)	225
BstEII	GGTNACC	2 cut(s)	1222, 1666
BstF5I	GGATG	6 cut(s)	127, 148, 667, 997, 1779, 2431
BstFNI	CGCG	1 cut(s)	307
BstHHI	GCGC	1 cut(s)	82
BstKTI	GATC	8 cut(s)	102, 1021, 1276, 1616, 1839, 1850, 1925, 2444
BstMAI	GTCTC	4 cut(s)	579, 829, 1500, 1931
BstMBI	GATC	8 cut(s)	99, 1018, 1273, 1613, 1836, 1847, 1922, 2441
BstMCI	CGRYCG	1 cut(s)	353
BstMWI	GCNNNNNNNGC	6 cut(s)	296, 381, 910, 1480, 1776, 2134
BstNI	CCWGG	2 cut(s)	1672, 2291
BstNSI	RCATGY	3 cut(s)	388, 392, 1541
BstPI	GGTNACC	2 cut(s)	1222, 1666
BstSCI	CCNGG	2 cut(s)	1670, 2289
BstSFI	CTRYAG	2 cut(s)	735, 2445
BstSNI	TACGTA	1 cut(s)	1862
BstUI	CGCG	1 cut(s)	307
BstV1I	GCAGC	6 cut(s)	766, 1052, 1571, 1773, 1839, 2185
BstX2I	RGATCY	1 cut(s)	2441
BstXI	CCANNNNNNTGG	2 cut(s)	226, 1766
BstYI	RGATCY	1 cut(s)	2441
Bsu15I	ATCGAT	1 cut(s)	1835
BsuI	GTATCC	1 cut(s)	713
BsuRI	GGCC	4 cut(s)	380, 1770, 2207, 2313
BsuTUI	ATCGAT	1 cut(s)	1835
BtgI	CCRYGG	1 cut(s)	225
BtgZI	GCGATG	1 cut(s)	2352
BtrI	CACGTC	1 cut(s)	1070
BtsCI	GGATG	6 cut(s)	127, 148, 667, 997, 1779, 2431
BtsI	GCAGTG	2 cut(s)	1072, 2038
BtsIMutI	CAGTG	5 cut(s)	547, 1072, 1391, 1745, 2038
BtuMI	TCGCGA	1 cut(s)	307
BveI	ACCTGC	1 cut(s)	469
Cac8I	GCNNGC	9 cut(s)	382, 386, 534, 647, 1485, 1539, 1589, 2130, 2171
CaiI	CAGNNNCTG	2 cut(s)	329, 2308
CciI	TCATGA	3 cut(s)	424, 448, 2477
CfoI	GCGC	1 cut(s)	82
Cfr10I	RCCGGY	1 cut(s)	602
Cfr13I	GGNCC	2 cut(s)	2206, 2311
ClaI	ATCGAT	1 cut(s)	1835
Csp6I	GTAC	4 cut(s)	1329, 1720, 1859, 1863
CspCI	CAANNNNNGTGG	2 cut(s)	1998, 2033
CviQI	GTAC	4 cut(s)	1329, 1720, 1859, 1863
DdeI	CTNAG	6 cut(s)	264, 1335, 1344, 1570, 2210, 2229
DpnI	GATC	8 cut(s)	101, 1020, 1275, 1615, 1838, 1849, 1924, 2443
DpnII	GATC	8 cut(s)	99, 1018, 1273, 1613, 1836, 1847, 1922, 2441
Eam1104I	CTCTTC	3 cut(s)	1796, 1929, 2093
EarI	CTCTTC	3 cut(s)	1796, 1929, 2093
Ecl136II	GAGCTC	1 cut(s)	2193
Eco105I	TACGTA	1 cut(s)	1862
Eco130I	CCWWGG	2 cut(s)	225, 1505
Eco24I	GRGCYC	1 cut(s)	2195
Eco32I	GATATC	1 cut(s)	593
Eco53kI	GAGCTC	1 cut(s)	2193
Eco57I	CTGAAG	2 cut(s)	1131, 1953
Eco91I	GGTNACC	2 cut(s)	1222, 1666
EcoICRI	GAGCTC	1 cut(s)	2193
EcoO65I	GGTNACC	2 cut(s)	1222, 1666
EcoRI	GAATTC	2 cut(s)	428, 2320
EcoRII	CCWGG	2 cut(s)	1670, 2289
EcoRV	GATATC	1 cut(s)	593
EcoT14I	CCWWGG	2 cut(s)	225, 1505
EcoT22I	ATGCAT	1 cut(s)	390
EcoT38I	GRGCYC	1 cut(s)	2195
ErhI	CCWWGG	2 cut(s)	225, 1505
FalI	AAGNNNNNCTT	6 cut(s)	669, 701, 1716, 1748, 2061, 2093
FaqI	GGGAC	3 cut(s)	1432, 2368, 2391
FauI	CCCGC	3 cut(s)	89, 329, 1791
FbaI	TGATCA	1 cut(s)	1018
FblI	GTMKAC	1 cut(s)	349
Fnu4HI	GCNGC	7 cut(s)	192, 755, 1041, 1585, 1787, 1828, 2174
FokI	GGATG	6 cut(s)	134, 155, 674, 984, 1766, 2438
FriOI	GRGCYC	1 cut(s)	2195
Fsp4HI	GCNGC	7 cut(s)	192, 755, 1041, 1585, 1787, 1828, 2174
FspBI	CTAG	6 cut(s)	467, 552, 1293, 1856, 1866, 2403
GlaI	GCGC	1 cut(s)	81
GluI	GCNGC	7 cut(s)	192, 755, 1041, 1585, 1787, 1828, 2174
GsaI	CCCAGC	3 cut(s)	2312, 2337, 2378
HaeIII	GGCC	4 cut(s)	380, 1770, 2207, 2313
HapII	CCGG	1 cut(s)	603
HhaI	GCGC	1 cut(s)	82
Hin6I	GCGC	1 cut(s)	80
HinP1I	GCGC	1 cut(s)	80
HincII	GTYRAC	4 cut(s)	350, 966, 1524, 2287
HindII	GTYRAC	4 cut(s)	350, 966, 1524, 2287
HindIII	AAGCTT	1 cut(s)	1971
HinfI	GANTC	7 cut(s)	179, 231, 326, 484, 1105, 1255, 2356
HpaI	GTTAAC	1 cut(s)	2287
HpaII	CCGG	1 cut(s)	603
HphI	GGTGA	2 cut(s)	226, 898
Hpy99I	CGWCG	1 cut(s)	351
HpyAV	CCTTC	6 cut(s)	393, 703, 1030, 1509, 1838, 1913
HpyCH4IV	ACGT	3 cut(s)	1069, 1248, 1861
HpyF10VI	GCNNNNNNNGC	6 cut(s)	296, 381, 910, 1480, 1776, 2134
HpyF3I	CTNAG	6 cut(s)	264, 1335, 1344, 1570, 2210, 2229
HpySE526I	ACGT	3 cut(s)	1069, 1248, 1861
HspAI	GCGC	1 cut(s)	80
Ksp22I	TGATCA	1 cut(s)	1018
KspAI	GTTAAC	1 cut(s)	2287
Kzo9I	GATC	8 cut(s)	99, 1018, 1273, 1613, 1836, 1847, 1922, 2441
LmnI	GCTCC	6 cut(s)	439, 751, 877, 1126, 2198, 2260
Lsp1109I	GCAGC	6 cut(s)	766, 1052, 1571, 1773, 1839, 2185
LweI	GCATC	7 cut(s)	133, 277, 661, 772, 1054, 1788, 1807
MaeI	CTAG	6 cut(s)	467, 552, 1293, 1856, 1866, 2403
MaeII	ACGT	3 cut(s)	1069, 1248, 1861
MaeIII	GTNAC	5 cut(s)	316, 1070, 1222, 1666, 2276
MalI	GATC	8 cut(s)	101, 1020, 1275, 1615, 1838, 1849, 1924, 2443
MboI	GATC	8 cut(s)	99, 1018, 1273, 1613, 1836, 1847, 1922, 2441
MfeI	CAATTG	2 cut(s)	1452, 2381
MflI	RGATCY	1 cut(s)	2441
MhlI	GDGCHC	2 cut(s)	2195, 2230
MlyI	GAGTC	1 cut(s)	2350
MmeI	TCCRAC	1 cut(s)	2416
Mph1103I	ATGCAT	1 cut(s)	390
MroXI	GAANNNNTTC	3 cut(s)	1056, 1104, 1358
MseI	TTAA	9 cut(s)	435, 696, 813, 926, 1176, 1490, 2249, 2255, 2286
MslI	CAYNNNNRTG	4 cut(s)	447, 492, 955, 1608
MspA1I	CMGCKG	1 cut(s)	1786
MspI	CCGG	1 cut(s)	603
MspR9I	CCNGG	2 cut(s)	1672, 2291
MunI	CAATTG	2 cut(s)	1452, 2381
MvaI	CCWGG	2 cut(s)	1672, 2291
MvnI	CGCG	1 cut(s)	307
MwoI	GCNNNNNNNGC	6 cut(s)	296, 381, 910, 1480, 1776, 2134
NcoI	CCATGG	1 cut(s)	225
NdeII	GATC	8 cut(s)	99, 1018, 1273, 1613, 1836, 1847, 1922, 2441
NlaIV	GGNNCC	3 cut(s)	63, 1290, 2262
NmuCI	GTSAC	1 cut(s)	1070
NruI	TCGCGA	1 cut(s)	307
NsiI	ATGCAT	1 cut(s)	390
NspI	RCATGY	3 cut(s)	388, 392, 1541
PaeI	GCATGC	2 cut(s)	388, 1541
PagI	TCATGA	3 cut(s)	424, 448, 2477
PdmI	GAANNNNTTC	3 cut(s)	1056, 1104, 1358
PfeI	GAWTC	6 cut(s)	179, 231, 326, 484, 1105, 1255
PkrI	GCNGC	7 cut(s)	193, 756, 1042, 1586, 1788, 1829, 2175
PleI	GAGTC	1 cut(s)	2350
PpsI	GAGTC	1 cut(s)	2350
Ppu21I	YACGTR	1 cut(s)	1862
PsiI	TTATAA	2 cut(s)	804, 1944
Psp124BI	GAGCTC	1 cut(s)	2195
Psp6I	CCWGG	2 cut(s)	1670, 2289
PspEI	GGTNACC	2 cut(s)	1222, 1666
PspFI	CCCAGC	3 cut(s)	2308, 2333, 2374
PspGI	CCWGG	2 cut(s)	1670, 2289
PspN4I	GGNNCC	3 cut(s)	63, 1290, 2262
PspPI	GGNCC	2 cut(s)	2206, 2311
PstI	CTGCAG	1 cut(s)	2449
PstNI	CAGNNNCTG	2 cut(s)	329, 2308
PsuI	RGATCY	1 cut(s)	2441
RruI	TCGCGA	1 cut(s)	307
RsaI	GTAC	4 cut(s)	1330, 1721, 1860, 1864
RsaNI	GTAC	4 cut(s)	1329, 1720, 1859, 1863
RseI	CAYNNNNRTG	4 cut(s)	447, 492, 955, 1608
SacI	GAGCTC	1 cut(s)	2195
SalI	GTCGAC	1 cut(s)	348
SaqAI	TTAA	9 cut(s)	435, 696, 813, 926, 1176, 1490, 2249, 2255, 2286
SatI	GCNGC	7 cut(s)	192, 755, 1041, 1585, 1787, 1828, 2174
Sau3AI	GATC	8 cut(s)	99, 1018, 1273, 1613, 1836, 1847, 1922, 2441
Sau96I	GGNCC	2 cut(s)	2206, 2311
SchI	GAGTC	1 cut(s)	2350
ScrFI	CCNGG	2 cut(s)	1672, 2291
SduI	GDGCHC	2 cut(s)	2195, 2230
SfaNI	GCATC	7 cut(s)	133, 277, 661, 772, 1054, 1788, 1807
SfcI	CTRYAG	2 cut(s)	735, 2445
SmiMI	CAYNNNNRTG	4 cut(s)	447, 492, 955, 1608
SmlI	CTYRAG	2 cut(s)	675, 2023
SmoI	CTYRAG	2 cut(s)	675, 2023
SnaBI	TACGTA	1 cut(s)	1862
SphI	GCATGC	2 cut(s)	388, 1541
SsiI	CCGC	6 cut(s)	96, 191, 336, 1457, 1784, 2432
SspI	AATATT	2 cut(s)	1658, 1948
SspMI	CTAG	6 cut(s)	467, 552, 1293, 1856, 1866, 2403
SstI	GAGCTC	1 cut(s)	2195
StyD4I	CCNGG	2 cut(s)	1670, 2289
StyI	CCWWGG	2 cut(s)	225, 1505
TaiI	ACGT	3 cut(s)	1072, 1251, 1864
TaqI	TCGA	4 cut(s)	349, 577, 1716, 1835
TaqII	GACCGA	1 cut(s)	367
TatI	WGTACW	2 cut(s)	1328, 1719
TauI	GCSGC	1 cut(s)	194
TfiI	GAWTC	6 cut(s)	179, 231, 326, 484, 1105, 1255
Tru1I	TTAA	9 cut(s)	435, 696, 813, 926, 1176, 1490, 2249, 2255, 2286
Tru9I	TTAA	9 cut(s)	435, 696, 813, 926, 1176, 1490, 2249, 2255, 2286
TscAI	CASTG	5 cut(s)	547, 1079, 1398, 1752, 2038
TseFI	GTSAC	1 cut(s)	1070
TseI	GCWGC	6 cut(s)	754, 1040, 1584, 1786, 1827, 2173
Tsp45I	GTSAC	1 cut(s)	1070
TspRI	CASTG	5 cut(s)	547, 1079, 1398, 1752, 2038
XceI	RCATGY	3 cut(s)	388, 392, 1541
XmiI	GTMKAC	1 cut(s)	349
XmnI	GAANNNNTTC	3 cut(s)	1056, 1104, 1358
XspI	CTAG	6 cut(s)	467, 552, 1293, 1856, 1866, 2403
Zsp2I	ATGCAT	1 cut(s)	390

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.