AT4G15890

non-SMC mitotic condensation complex subunit 1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0012287
Physical Location & Seq
Forward (+)
9017256 .. 9023026
5771 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G15890.2

Sequence Viewer

Length: 3945 bp
ATGGATGAAGAGCTTCTGCTCACTAGAATCCTTGCAGGAATCGAAGGAGGAGACGATGAATCTGACTATCATGAACTCGTCACGGATCTCAAATCTCTACTTGATACAGACGATGATGAAATTCTCAATCGATTCTACGGTAGTCTCTCCTCAATGGCTTCTTCGTTTCTCCGCTGTATCTCCGCCGCCATGGATTCTCCGGTTGAATCAGGCCGTCTTGCTATTTTAGCCTCCGACGCTTATCTCAGTCTGCTTCTTTCCACGAATTGCCCCGTTTTCACTTTCTTCTCTCCGATTGCGTTTCTTTCTCTACTTGGCTCAATTCGCCGCTACCTCAAACGCCGTGATGATTCCGCCGGTCAAGGGAGTAATTCGCAGCGAGAGAAAGGGAATAAGAAGAAGAGAGGACGTGGTAAGAGGAATTTAGGGTATGAAGATGGGGAAGAGACTGAAGAAGGTGGATTTGATGCGAAATTGATGTTTATAGTGTTAGAGAAGCTTGGCTCGGTTCTGAGTTTTGTTCATTTAGATAGATTTCCTGATAGTTTGAAATCTTTGGTACAAACTGTGAGTGAGATTCCTTTATTGGCGTTGGAGCACTCTGGAGTTTTGAATTATGATCGATTGATGGAAATGTGTGGGAAGATTCTGGGAGGAGTGTTGAATTCTGACCATGGAGATATGGCACTCACTGCTGCTGAGATTTCAAAGTCTTTGACACCGTTGCTTCTTATGGGGAAACATCAAGCGAGAAGTTTTGCGTTGGGATTTGTGTCAAGGAAATTGATGAGTTTGGCTAAAGATAACCCTGAATTGAAAAAAGTTGTGTCTAATTTGCCTAAGTTTCTGGTTCATAAGGCACCTGAGAAGGCCGAGCCGCGTGGATTTGCAGTGGAGGCGGTACTGGAGATTGTAAAGGCAATGGAGGTTGAGGGCCAATCAGAGTTTGTTGATTTTGTAATGAAGATGTGTCAAGGGAAGTCTAATTTTAGAGTATTAGCTGTTGATATTATACCTCTGTTGATAAGCTCATTAGGAAACCCTCTAGGAGATATTAGTTCAGAGAATGGGTTGAAAGATTCGTGGGGCTTGGGTTGTATTGATGCTTTAGTTCAGCGGTGTTCAGACACGAGCGCTTTGATTAGAGCTCGAGCTTTGTCCAACTTGGCTCAAGTTGTGGAGTTCTTGTCTGGTGATGAAAGGAGTAGGTCGATCCTGAAACAAGCCCTTGGGTTTAACGGTGAGACTTCAGAGGGAAAAGGTGCAGTAACTGACCTTTTGAAGAAAAGATGTGTGGATGAGAAGGCGGCTGTAAGGAGAGCAGCTCTTCTTCTGGTGACAAAATTGACATCGCTTATGGGTGGTTGCTTTGATGGTAGTATCCTAAAGACAATGGGTACATCTTGTTCTGATCCGCTAATAAGTATAAGAAAGGCTGCAGTTTCAGCTATTTCCGAGGCATTCAGAATATGTACAGATGAAATTGTGACCACTGAATGGTTACATTCTGTTCCTCGGATGATCATGGACAATGAAACTAGCATCCAAGAAGAATGCGAGAATGTCTTTCATGAATTAGTTCTGGAGAGAATATTACGAGCTGGAAATGTGCTTTCTCCAGACAGTGCTTCTCTCCCTAACAACCGGAACACTACTTCAAAAGATCTAGACAGAGACATTGAAGCCTTGTTTCCAGAAGGAGTTTTGGTTCTCTTAAGGGAGCTTTGCAACAGTGAGGTTTCTCCTTGGGTTACGAAAATATGTGGAAGTTTGGGAAAGAAGAAGCGACTAAAACCAAGAGTTGCCCTTGCGCTTCAGTGTATCATAAAGGAATCTGAATCACTGTGGTTGAGTCGTTCAATGCCAATAAATAGATGGACAGCTCCTGCTGGTGCTTGGTTCCTTCTATCAGAGGTTTCAGTTTATCTTTCAAAGTCTGTCGAATGGGAATTTCTTCACCATCATTGGCAGTTGCTTGACAAGAATGACGTACAAGGGCTAGATGAACAAGGTGATGAACAGGGGGTCGAGTGTAATTCTTCTACATGGGCTGGCGATCGAGTTTGTCTTTTGCAAACAATCTCCAATGTTTCCCTTCAGCTGCCAGCAGAGCCTGCTGCAGATCTGGCTGACAATTTGCTGAAGAAAATCGAAAATTTTAACCTGCATTCTGCTGAGGTCGATGCACATGTCAAAGCATTAAAAACTTTGTGCAAAAAGAAGGCAAGCACCTCTGAGGAGGCCGATATGCTTGTCAAGAAGTGGGTAGAACAAGTTTCATTGAAAGCATCTAAGGTCACTGAGAAGTACATCGAGGGGGTTTCCAGTCATAATCATTCTTTTGTTACACCAGCAACACTCGGAAGTAGAAGAAGCAAGAGACTGGATACTGTGTCCAAGAAATTATCAAAAGCAGTCACAGCAGTATACACCATTGGATCTTGTGTCATTATATATCCTTCAGCTGACACGACCAAAATTGTTCCGTTCTTACATACTGTCATCACTTCAGGAAATTCAGACTCAAAGCTGAAAAACAAACTGCCGCAAGCTAATGTTTGCTTGAAGCAAAAAGCTCCTCTTCTCTATAGTCAGTCTTGGTTAACCATGGCGAAGATGTGTTTGGCTGACGGGAAGCTTGCTAAAAGATATCTCCCTCTCTTTGCACAGGAACTTGAAAAGAGTGATTGTGCAGCCTTGCGTAACAATCTTGTAGTAGCGATGACAGACTTTTGTGTTCACTATACAGCCATGATTGAGTGTTACATACCGAAGATTACTAAACGTCTTCGGGATCCTTGTGAAGTTGTTAGAAGGCAAACCTTCATACTTCTCTCAAGGTTACTACAGAGAGACTACGTGAAATGGAGAGGAGTTCTCTTCCTTCGATTCCTTCTATCGCTAGTGGATGAATCTGAAAAGATACGTCGACTTGCAGACTTTTTATTTGGAAGCATCCTTAAAGTAAAGGCGCCACTTCTAGCTTACAACAGTTTCGTGGAAGCTATTTATGTCTTAAACGACTGCCATGCCCACACTGGCCATAGTAATCCAGATTCTAAACAATCAAGAACAAAGGATCAAGTTTTTTCTATCAGAGGGAATGATGAAAGGGCTAGGTCTAAAAGAATGCAGATCTACGTTACTTTGCTTAAACAAATGGCCCCAGAACACCTTTTGGCCACATTCGCCAAGTTATGTGCAGAGATCCTCGCAGCTGCTTCTGATGGAATGCTCAACATAGAAGATGTCACTGGTCAATCAGTTCTACAGGATGCGTTTCAGATCTTGGCGTGCAAAGAGATCCGTTTATCAGTTTCCAGAGGAGCATCGTCGGAGACAGCAGATATAGAGGAAGAAGGTGGAGATGCAGCAACTGCAAAAGGAAGGGCCATAACGCACGCTGTTAGAAAAGGTTTGATTCAGAACACGATTCCAATCTTCATTGAGCTCAAGAGGCTATTGGAGAGCAAGAACAGTCCTCTCACAGGTTCGCTCATGGACTGCCTCCGTGTCCTCCTCAAAGACTACAAGAACGAGATCGAAGAAATGCTTGTCGCTGACAAACAGCTTCAGAAAGAGCTTGTTTACGATATGCAGAAGCACGAGGCTGCAAAGGCAAGGTCCATGGCTAACCAAGGGGTTGCCTGCGGGACAAGTCATAGAAACGGTGAACCTGAAGCATCAGCAGCAAGCGAGGAGAATGTTAGAGATTCGGGATTGGAATCAAGAGTGGTTTCTGCGGCTGCTGATGTGGTGGCGGCTAAGGCAGCTAGGTCGGTGTTGAGAGAAGTGAACGGTGGAGCTGCAACGCCGCCTCTGAGCGCAATGAGTGTTCCGAAGCTAAGGTCGAGCCGTGGAGTTAGCCAGAGTGGTCGACCATCAGCTGATGTGTTGGAGTCTCTGAGAAGAAGACCAACTTTCATGTCTGATGATGAGAGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cnd1

Protein Analysis

1314

Amino Acids

144.74

Weight (kDa)

7.46

Isoelectric Point (pI)

46.57

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cnd1 PF12717 896 - 1054 1.2e-17 non-SMC mitotic condensation complex subunit 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012287)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G15890 AT4G15890
fragaria_vesca FvH4_4g18310
malus_domestica MD16G1167900.v1.1
prunus_persica Prupe.1G134700_v2.0.a1 Prupe.1G134700_v2.0.a1 Prupe.1G134700_v2.0.a1 Prupe.1G134700_v2.0.a1
pyrus_communis pycom16g14150
rosa_chinensis RchiOBHm_Chr4g0422791
rosa_laevigata RLG00000007605
rosa_multiflora Rmu_sc0000830.1_g000049
rosa_roxburghii Rroxscaffold_5G00364640
rosa_rugosa Rorug04G0181400
rosa_samantha Rh4AG241800 Rh4BG245200 Rh4CG255700 Rh4DG240400
rosa_wichuraiana Rw4G020810

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 2172
AccB1I GGYRCC 2 cut(s) 859, 2971
AccB7I CCANNNNNTGG 1 cut(s) 1497
AccI GTMKAC 3 cut(s) 2427, 2929, 3877
AccII CGCG 1 cut(s) 880
AclWI GGATC 9 cut(s) 93, 1207, 1406, 2446, 2789, 2802, 3087, 3202, 3298
AcoI YGGCCR 2 cut(s) 3040, 3180
AcsI RAATTY 6 cut(s) 120, 421, 664, 1949, 2155, 2515
AcuI CTGAAG 9 cut(s) 471, 1233, 1799, 2081, 2162, 2445, 2493, 3557, 3699
AcyI GRCGYC 1 cut(s) 2972
AfaI GTAC 6 cut(s) 561, 903, 1399, 1474, 1992, 2309
AfeI AGCGCT 1 cut(s) 1135
AfiI CCNNNNNNNGG 3 cut(s) 363, 1497, 3488
AflII CTTAAG 1 cut(s) 1714
AflIII ACRYGT 1 cut(s) 2188
AjiI CACGTC 1 cut(s) 410
AjuI GAANNNNNNNTTGG 2 cut(s) 2606, 2638
AloI GAACNNNNNNTCC 2 cut(s) 1692, 1724
Alw21I GWGCWC 3 cut(s) 600, 1150, 3453
Alw26I GTCTC 9 cut(s) 45, 149, 440, 1238, 1668, 2374, 2847, 3332, 3906
AlwI GGATC 9 cut(s) 93, 1207, 1406, 2446, 2789, 2802, 3087, 3202, 3298
AlwNI CAGNNNCTG 4 cut(s) 1271, 1886, 2114, 3377
Ama87I CYCGRG 1 cut(s) 1149
Aor51HI AGCGCT 1 cut(s) 1135
AoxI GGCC 8 cut(s) 211, 870, 934, 2241, 3040, 3162, 3180, 3390
ApoI RAATTY 6 cut(s) 120, 421, 664, 1949, 2155, 2515
ArsI GACNNNNNNTTYG 6 cut(s) 2930, 2962, 3608, 3640, 3833, 3865
Asp700I GAANNNNTTC 3 cut(s) 12, 1578, 1953
AspLEI GCGC 4 cut(s) 1136, 1813, 2974, 3827
AspS9I GGNCC 4 cut(s) 934, 3163, 3390, 3624
AsuHPI GGTGA 6 cut(s) 1205, 1253, 1348, 1949, 2024, 3683
AvaI CYCGRG 1 cut(s) 1149
AvaII GGWCC 1 cut(s) 3624
BalI TGGCCA 2 cut(s) 3042, 3182
BamHI GGATCC 1 cut(s) 2794
BanI GGYRCC 2 cut(s) 859, 2971
BanII GRGCYC 2 cut(s) 1150, 3453
BauI CACGAG 2 cut(s) 1129, 3605
BbsI GAAGAC 2 cut(s) 2780, 3919
Bbv12I GWGCWC 3 cut(s) 600, 1150, 3453
BbvCI CCTCAGC 1 cut(s) 2175
BccI CCATC 7 cut(s) 431, 622, 1367, 1869, 1968, 3221, 3889
BceAI ACGGC 3 cut(s) 198, 327, 3840
BcgI CGANNNNNNTGC 4 cut(s) 3011, 3045, 3759, 3793
BciVI GTATCC 2 cut(s) 1391, 2380
BclI TGATCA 1 cut(s) 1521
BcoDI GTCTC 9 cut(s) 45, 149, 440, 1238, 1668, 2374, 2847, 3332, 3906
BfaI CTAG 9 cut(s) 24, 1046, 1539, 1667, 2000, 2903, 2981, 3117, 3774
BfmI CTRYAG 5 cut(s) 1437, 2118, 2587, 2846, 3269
BfoI RGCGCY 2 cut(s) 1137, 2975
BfrI CTTAAG 1 cut(s) 1714
BfuAI ACCTGC 1 cut(s) 2172
BfuI GTATCC 2 cut(s) 1391, 2380
BglII AGATCT 4 cut(s) 1663, 2122, 3135, 3285
Bme18I GGWCC 1 cut(s) 3624
BmeT110I CYCGRG 1 cut(s) 1149
BmgBI CACGTC 1 cut(s) 410
BmgT120I GGNCC 4 cut(s) 934, 3163, 3390, 3624
BmiI GGNNCC 5 cut(s) 861, 1901, 2796, 2973, 3165
BpiI GAAGAC 2 cut(s) 2780, 3919
BplI GAGNNNNNCTC 4 cut(s) 1309, 1341, 2862, 2894
BpmI CTGGAG 4 cut(s) 624, 926, 1602, 1604
Bpu10I CCTNAGC 3 cut(s) 2175, 3765, 3845
BpuEI CTTGAG 3 cut(s) 1155, 2821, 3437
Bsa29I ATCGAT 2 cut(s) 130, 622
BsaAI YACGTR 1 cut(s) 2860
BsaBI GATNNNNATC 2 cut(s) 3437, 3724
BsaHI GRCGYC 1 cut(s) 2972
BsaWI WCCGGW 2 cut(s) 199, 1644
BsaXI ACNNNNNCTCC 4 cut(s) 1172, 1202, 1692, 1722
Bsc4I CCNNNNNNNGG 3 cut(s) 363, 1497, 3488
Bse118I RCCGGY 1 cut(s) 356
Bse1I ACTGG 5 cut(s) 909, 2325, 2388, 3043, 3259
Bse3DI GCAATG 2 cut(s) 927, 3834
Bse8I GATNNNNATC 2 cut(s) 3437, 3724
BseCI ATCGAT 2 cut(s) 130, 622
BseGI GGATG 7 cut(s) 10, 1303, 1524, 1542, 2914, 2955, 3280
BseJI GATNNNNATC 2 cut(s) 3437, 3724
BseLI CCNNNNNNNGG 3 cut(s) 363, 1497, 3488
BseMI GCAATG 2 cut(s) 927, 3834
BseMII CTCAG 9 cut(s) 259, 503, 690, 855, 2166, 2226, 2292, 3812, 3896
BseNI ACTGG 5 cut(s) 909, 2325, 2388, 3043, 3259
BseRI GAGGAG 9 cut(s) 63, 139, 669, 2252, 2568, 2886, 3339, 3509, 3713
BsgI GTGCAG 3 cut(s) 1284, 2712, 3222
Bsh1236I CGCG 1 cut(s) 880
Bsh1285I CGRYCG 1 cut(s) 2059
BshFI GGCC 8 cut(s) 213, 872, 936, 2243, 3042, 3164, 3182, 3392
BshNI GGYRCC 2 cut(s) 859, 2971
BshVI ATCGAT 2 cut(s) 130, 622
BsiEI CGRYCG 1 cut(s) 2059
BsiHKAI GWGCWC 3 cut(s) 600, 1150, 3453
BsiHKCI CYCGRG 1 cut(s) 1149
BsiSI CCGG 3 cut(s) 200, 357, 1645
BslFI GGGAC 1 cut(s) 3667
BslI CCNNNNNNNGG 3 cut(s) 363, 1497, 3488
BsmAI GTCTC 9 cut(s) 45, 149, 440, 1238, 1668, 2374, 2847, 3332, 3906
BsmBI CGTCTC 1 cut(s) 45
BsmFI GGGAC 1 cut(s) 3667
BsmI GAATGC 5 cut(s) 1460, 1559, 2167, 3135, 3237
BsnI GGCC 8 cut(s) 213, 872, 936, 2243, 3042, 3164, 3182, 3392
BsoBI CYCGRG 1 cut(s) 1149
Bsp1286I GDGCHC 3 cut(s) 600, 1150, 3453
Bsp1407I TGTACA 1 cut(s) 1472
Bsp19I CCATGG 4 cut(s) 189, 673, 2607, 3627
BspANI GGCC 8 cut(s) 213, 872, 936, 2243, 3042, 3164, 3182, 3392
BspCNI CTCAG 9 cut(s) 258, 504, 691, 856, 2167, 2227, 2293, 3813, 3897
BspDI ATCGAT 2 cut(s) 130, 622
BspFNI CGCG 1 cut(s) 880
BspHI TCATGA 2 cut(s) 70, 1570
BspLI GGNNCC 5 cut(s) 861, 1901, 2796, 2973, 3165
BspMAI CTGCAG 2 cut(s) 1441, 2122
BspMI ACCTGC 1 cut(s) 2172
BspPI GGATC 9 cut(s) 93, 1207, 1406, 2446, 2789, 2802, 3087, 3202, 3298
BspQI GCTCTTC 2 cut(s) 3, 1332
BspT107I GGYRCC 2 cut(s) 859, 2971
BspTI CTTAAG 1 cut(s) 1714
BsrDI GCAATG 2 cut(s) 927, 3834
BsrFI RCCGGY 1 cut(s) 356
BsrGI TGTACA 1 cut(s) 1472
BsrI ACTGG 5 cut(s) 909, 2325, 2388, 3043, 3259
BssAI RCCGGY 1 cut(s) 356
BssNAI GTATAC 1 cut(s) 2428
BssNI GRCGYC 1 cut(s) 2972
BssSI CACGAG 2 cut(s) 1129, 3605
BssT1I CCWWGG 7 cut(s) 189, 673, 1228, 1745, 2607, 3627, 3637
Bst1107I GTATAC 1 cut(s) 2428
Bst2BI CACGAG 2 cut(s) 1129, 3605
Bst6I CTCTTC 6 cut(s) 3, 395, 438, 1332, 2586, 2885
BstACI GRCGYC 1 cut(s) 2972
BstAFI CTTAAG 1 cut(s) 1714
BstAPI GCANNNNNTGC 3 cut(s) 692, 2114, 3377
BstAUI TGTACA 1 cut(s) 1472
BstBAI YACGTR 1 cut(s) 2860
BstDSI CCRYGG 5 cut(s) 189, 673, 2607, 3627, 3856
BstENI CCTNNNNNAGG 1 cut(s) 3486
BstF5I GGATG 7 cut(s) 10, 1303, 1524, 1542, 2914, 2955, 3280
BstFNI CGCG 1 cut(s) 880
BstH2I RGCGCY 2 cut(s) 1137, 2975
BstHHI GCGC 4 cut(s) 1136, 1813, 2974, 3827
BstMAI GTCTC 9 cut(s) 45, 149, 440, 1238, 1668, 2374, 2847, 3332, 3906
BstMCI CGRYCG 1 cut(s) 2059
BstNSI RCATGY 1 cut(s) 2192
BstSFI CTRYAG 5 cut(s) 1437, 2118, 2587, 2846, 3269
BstUI CGCG 1 cut(s) 880
BstV2I GAAGAC 2 cut(s) 2780, 3919
BstX2I RGATCY 9 cut(s) 85, 1663, 2122, 2438, 2794, 3135, 3207, 3285, 3303
BstYI RGATCY 9 cut(s) 85, 1663, 2122, 2438, 2794, 3135, 3207, 3285, 3303
BstZ17I GTATAC 1 cut(s) 2428
Bsu15I ATCGAT 2 cut(s) 130, 622
BsuI GTATCC 2 cut(s) 1391, 2380
BsuRI GGCC 8 cut(s) 213, 872, 936, 2243, 3042, 3164, 3182, 3392
BsuTUI ATCGAT 2 cut(s) 130, 622
BtgI CCRYGG 5 cut(s) 189, 673, 2607, 3627, 3856
BtgZI GCGATG 2 cut(s) 1335, 2735
BtrI CACGTC 1 cut(s) 410
BtsCI GGATG 7 cut(s) 10, 1303, 1524, 1542, 2914, 2955, 3280
BtsI GCAGTG 2 cut(s) 690, 897
BveI ACCTGC 1 cut(s) 2172
CaiI CAGNNNCTG 4 cut(s) 1271, 1886, 2114, 3377
CciI TCATGA 2 cut(s) 70, 1570
CfoI GCGC 4 cut(s) 1136, 1813, 2974, 3827
Cfr10I RCCGGY 1 cut(s) 356
Cfr13I GGNCC 4 cut(s) 934, 3163, 3390, 3624
ClaI ATCGAT 2 cut(s) 130, 622
CseI GACGC 1 cut(s) 245
Csp6I GTAC 6 cut(s) 560, 902, 1398, 1473, 1991, 2308
CviQI GTAC 6 cut(s) 560, 902, 1398, 1473, 1991, 2308
DinI GGCGCC 1 cut(s) 2973
EaeI YGGCCR 2 cut(s) 3040, 3180
Eam1104I CTCTTC 6 cut(s) 3, 395, 438, 1332, 2586, 2885
EarI CTCTTC 6 cut(s) 3, 395, 438, 1332, 2586, 2885
EciI GGCGGA 2 cut(s) 172, 343
Ecl136II GAGCTC 2 cut(s) 1148, 3451
Eco130I CCWWGG 7 cut(s) 189, 673, 1228, 1745, 2607, 3627, 3637
Eco24I GRGCYC 2 cut(s) 1150, 3453
Eco32I GATATC 1 cut(s) 2651
Eco47I GGWCC 1 cut(s) 3624
Eco47III AGCGCT 1 cut(s) 1135
Eco53kI GAGCTC 2 cut(s) 1148, 3451
Eco57I CTGAAG 9 cut(s) 471, 1233, 1799, 2081, 2162, 2445, 2493, 3557, 3699
Eco88I CYCGRG 1 cut(s) 1149
EcoICRI GAGCTC 2 cut(s) 1148, 3451
EcoNI CCTNNNNNAGG 1 cut(s) 3486
EcoRI GAATTC 1 cut(s) 664
EcoRV GATATC 1 cut(s) 2651
EcoT14I CCWWGG 7 cut(s) 189, 673, 1228, 1745, 2607, 3627, 3637
EcoT38I GRGCYC 2 cut(s) 1150, 3453
EgeI GGCGCC 1 cut(s) 2973
EheI GGCGCC 1 cut(s) 2973
ErhI CCWWGG 7 cut(s) 189, 673, 1228, 1745, 2607, 3627, 3637
Esp3I CGTCTC 1 cut(s) 45
FalI AAGNNNNNCTT 6 cut(s) 2565, 2597, 3537, 3569, 3904, 3936
FaqI GGGAC 1 cut(s) 3667
FauI CCCGC 1 cut(s) 3644
FbaI TGATCA 1 cut(s) 1521
FblI GTMKAC 3 cut(s) 2427, 2929, 3877
FokI GGATG 7 cut(s) 17, 1310, 1529, 1531, 2921, 2942, 3287
FriOI GRGCYC 2 cut(s) 1150, 3453
FspBI CTAG 9 cut(s) 24, 1046, 1539, 1667, 2000, 2903, 2981, 3117, 3774
GlaI GCGC 4 cut(s) 1135, 1812, 2973, 3826
GsuI CTGGAG 4 cut(s) 624, 926, 1602, 1604
HaeII RGCGCY 2 cut(s) 1137, 2975
HaeIII GGCC 8 cut(s) 213, 872, 936, 2243, 3042, 3164, 3182, 3392
HapII CCGG 3 cut(s) 200, 357, 1645
HgaI GACGC 1 cut(s) 245
HhaI GCGC 4 cut(s) 1136, 1813, 2974, 3827
Hin1I GRCGYC 1 cut(s) 2972
Hin6I GCGC 4 cut(s) 1134, 1811, 2972, 3825
HinP1I GCGC 4 cut(s) 1134, 1811, 2972, 3825
HincII GTYRAC 3 cut(s) 2604, 2930, 3878
HindII GTYRAC 3 cut(s) 2604, 2930, 3878
HindIII AAGCTT 2 cut(s) 497, 2636
HpaI GTTAAC 1 cut(s) 2604
HpaII CCGG 3 cut(s) 200, 357, 1645
HphI GGTGA 6 cut(s) 1205, 1253, 1348, 1949, 2024, 3683
Hpy166II GTNNAC 8 cut(s) 2428, 2604, 2740, 2930, 3589, 3674, 3796, 3878
Hpy8I GTNNAC 8 cut(s) 2428, 2604, 2740, 2930, 3589, 3674, 3796, 3878
Hpy99I CGWCG 3 cut(s) 239, 2931, 3337
HpyCH4IV ACGT 6 cut(s) 409, 1989, 2785, 2859, 2926, 3141
HpySE526I ACGT 6 cut(s) 409, 1989, 2785, 2859, 2926, 3141
Hsp92I GRCGYC 1 cut(s) 2972
HspAI GCGC 4 cut(s) 1134, 1811, 2972, 3825
KasI GGCGCC 1 cut(s) 2971
Ksp22I TGATCA 1 cut(s) 1521
KspAI GTTAAC 1 cut(s) 2604
LguI GCTCTTC 2 cut(s) 3, 1332
LmnI GCTCC 6 cut(s) 595, 1720, 1888, 2581, 3326, 3803
MaeI CTAG 9 cut(s) 24, 1046, 1539, 1667, 2000, 2903, 2981, 3117, 3774
MaeII ACGT 6 cut(s) 409, 1989, 2785, 2859, 2926, 3141
MflI RGATCY 9 cut(s) 85, 1663, 2122, 2438, 2794, 3135, 3207, 3285, 3303
MhlI GDGCHC 3 cut(s) 600, 1150, 3453
MlsI TGGCCA 2 cut(s) 3042, 3182
MluNI TGGCCA 2 cut(s) 3042, 3182
Mly113I GGCGCC 1 cut(s) 2972
MlyI GAGTC 3 cut(s) 1861, 2516, 3908
MmeI TCCRAC 5 cut(s) 258, 573, 1185, 3315, 3876
Mox20I TGGCCA 2 cut(s) 3042, 3182
MroXI GAANNNNTTC 3 cut(s) 12, 1578, 1953
MscI TGGCCA 2 cut(s) 3042, 3182
MseI TTAA 8 cut(s) 1236, 1715, 2160, 2201, 2603, 2961, 3017, 3153
Msp20I TGGCCA 2 cut(s) 3042, 3182
MspA1I CMGCKG 6 cut(s) 174, 1117, 2101, 2465, 3218, 3887
MspCI CTTAAG 1 cut(s) 1714
MspI CCGG 3 cut(s) 200, 357, 1645
Mva1269I GAATGC 5 cut(s) 1460, 1559, 2167, 3135, 3237
MvnI CGCG 1 cut(s) 880
NarI GGCGCC 1 cut(s) 2972
NcoI CCATGG 4 cut(s) 189, 673, 2607, 3627
NlaIV GGNNCC 5 cut(s) 861, 1901, 2796, 2973, 3165
NmeAIII GCCGAG 1 cut(s) 898
NmuCI GTSAC 6 cut(s) 79, 1336, 1486, 2296, 2416, 3250
NspI RCATGY 1 cut(s) 2192
PaeR7I CTCGAG 1 cut(s) 1149
PagI TCATGA 2 cut(s) 70, 1570
PciI ACATGT 1 cut(s) 2188
PciSI GCTCTTC 2 cut(s) 3, 1332
PctI GAATGC 5 cut(s) 1460, 1559, 2167, 3135, 3237
PdmI GAANNNNTTC 3 cut(s) 12, 1578, 1953
PflMI CCANNNNNTGG 1 cut(s) 1497
Ple19I CGATCG 1 cut(s) 2059
PleI GAGTC 3 cut(s) 1860, 2516, 3907
PluTI GGCGCC 1 cut(s) 2975
PpsI GAGTC 3 cut(s) 1860, 2516, 3907
Ppu21I YACGTR 1 cut(s) 2860
PscI ACATGT 1 cut(s) 2188
Psp124BI GAGCTC 2 cut(s) 1150, 3453
PspN4I GGNNCC 5 cut(s) 861, 1901, 2796, 2973, 3165
PspPI GGNCC 4 cut(s) 934, 3163, 3390, 3624
PspXI VCTCGAGB 1 cut(s) 1149
PsrI GAACNNNNNNTAC 2 cut(s) 1390, 1422
PstI CTGCAG 2 cut(s) 1441, 2122
PstNI CAGNNNCTG 4 cut(s) 1271, 1886, 2114, 3377
PsuI RGATCY 9 cut(s) 85, 1663, 2122, 2438, 2794, 3135, 3207, 3285, 3303
PvuI CGATCG 1 cut(s) 2059
PvuII CAGCTG 4 cut(s) 2101, 2465, 3218, 3887
RsaI GTAC 6 cut(s) 561, 903, 1399, 1474, 1992, 2309
RsaNI GTAC 6 cut(s) 560, 902, 1398, 1473, 1991, 2308
SacI GAGCTC 2 cut(s) 1150, 3453
SalI GTCGAC 2 cut(s) 2928, 3876
SapI GCTCTTC 2 cut(s) 3, 1332
SaqAI TTAA 8 cut(s) 1236, 1715, 2160, 2201, 2603, 2961, 3017, 3153
Sau96I GGNCC 4 cut(s) 934, 3163, 3390, 3624
SchI GAGTC 3 cut(s) 1861, 2516, 3908
SduI GDGCHC 3 cut(s) 600, 1150, 3453
SfcI CTRYAG 5 cut(s) 1437, 2118, 2587, 2846, 3269
SfoI GGCGCC 1 cut(s) 2973
Sfr274I CTCGAG 1 cut(s) 1149
SinI GGWCC 1 cut(s) 3624
SlaI CTCGAG 1 cut(s) 1149
SmlI CTYRAG 5 cut(s) 1149, 1170, 1714, 2836, 3452
SmoI CTYRAG 5 cut(s) 1149, 1170, 1714, 2836, 3452
SspDI GGCGCC 1 cut(s) 2971
SspI AATATT 1 cut(s) 1593
SspMI CTAG 9 cut(s) 24, 1046, 1539, 1667, 2000, 2903, 2981, 3117, 3774
SstI GAGCTC 2 cut(s) 1150, 3453
StyI CCWWGG 7 cut(s) 189, 673, 1228, 1745, 2607, 3627, 3637
TaiI ACGT 6 cut(s) 412, 1992, 2788, 2862, 2929, 3144
TatI WGTACW 2 cut(s) 1472, 2307
TauI GCSGC 8 cut(s) 188, 330, 880, 1310, 2548, 3746, 3764, 3817
Tru1I TTAA 8 cut(s) 1236, 1715, 2160, 2201, 2603, 2961, 3017, 3153
Tru9I TTAA 8 cut(s) 1236, 1715, 2160, 2201, 2603, 2961, 3017, 3153
TseFI GTSAC 6 cut(s) 79, 1336, 1486, 2296, 2416, 3250
Tsp45I GTSAC 6 cut(s) 79, 1336, 1486, 2296, 2416, 3250
TspGWI ACGGA 4 cut(s) 98, 2475, 3296, 3500
Van91I CCANNNNNTGG 1 cut(s) 1497
Vha464I CTTAAG 1 cut(s) 1714
VpaK11BI GGWCC 1 cut(s) 3624
XagI CCTNNNNNAGG 1 cut(s) 3486
XapI RAATTY 6 cut(s) 120, 421, 664, 1949, 2155, 2515
XbaI TCTAGA 1 cut(s) 1666
XceI RCATGY 1 cut(s) 2192
XcmI CCANNNNNNNNNTGG 2 cut(s) 1872, 3035
XhoI CTCGAG 1 cut(s) 1149
XmiI GTMKAC 3 cut(s) 2427, 2929, 3877
XmnI GAANNNNTTC 3 cut(s) 12, 1578, 1953
XspI CTAG 9 cut(s) 24, 1046, 1539, 1667, 2000, 2903, 2981, 3117, 3774
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.