Prupe.1G134700_v2.0.a1

Condensin-2 complex subunit

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
10637439 .. 10644102
6664 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G134700.3

Sequence Viewer

Length: 4041 bp
ATGGAGGAAGCCATAACTCGAATAGTCACAGAGCTCGAAGAACTCCGCCACTCTGAAAACCCCTCAGACCGCCAAACCCTACCCATCTCCGATTCCACCCTCTCAGACCTTCAAACCCTCTTAGACAACGCCCTCACCGACGATGACCCTGAACTCATGGACCGCCTCCACGACGAGCTCTCCTCCAAGTCCCTCTCTTTGTCCAATCTCGTCCGTCCGATCGCCTCCGCCATGGATTTGGGCCGTACCCATCTCGCCCTTTCAGCCTCCAAAGTCTACCTCTCTCTTCTCCTCTCACCCAATTCCCCTGTCTGCACTCTCTTCAACCCCATGGACTTTCTCTCTCTCCTCCAATCCATTCGCCGGTCCCTCAAGCATCGTCCTCCAGGTGAATCCAGCCATGGGTCCCACGTTGCCGCTAATAAGAAGAGAAAGGGCCGCATCAGAAATCGGGGTTTGAAGAATTGTGCCCAGAGTTCTCACGATGAAGATTGTGATGGGGAAGAGAGTGAATTTGATGTGAGGGTCTTGTTTACTGTTCTTGAAAGGTTGGAACTTGTAATGGGGTTGATTCATTTGGACCGCTTTCCGGATAGTTTGAAGTCTTTGGTTCAAACTGTGGCTGAAATTCCAGTGATGGCGCTTGAAGTATGCGGTAATTCAGGCAGTTATAGCAGACTAACCGATCTGTGCTCGCAGATTTTGCTTAAAGTGTTCATACCTGAGCATGAGGACCAAGCTAACATTGCAGCCGAGGTGTTGAAGTCATTGTCTCCGATGATTCTTCAGCATAAATCTCAAGTGCGGGCATTTGCATTGGGGTTCGTGACGAATCGAATGATGAGTGCGGCCAAGACGCTTGATAGAGTCAGGAAAGCAGTGGTGAATTTTCCGAGGTACTTGGTTCAAAAGGCACCGGAGAAGTCTGAGCCCCGGGCTTTGGCTGTAGAGTCTATCATGGAAATTGTTAGATTTTTGGAATTTGAGGACCAAATGGGGTTTGTGGGTTATGTAGTGAAGATGACTCAAGGGAAAGCTAGCTTGAGGCTCTTGGCTGTTGACCTTATTCTGGTGCTAGTGACATCGTTGAGAGATACATTGGGGTTGAATTCAGAAAGTGAAGTGAACGATTCATTGGGTCTGAAATGCTTAGAGGCTTTGATTCAACGTTGTTCAGATGTAGTTGCTGGAGTTCGAGGCCGTGCTTTGTCAAACTTGTCACAGCTGGTGGGCTTATTGTCAGGTGATGATAGGGGTCAGGCTGTGCTGGAAGAAGTTATGGGGCTTGGCAATGCAAGTGACCAAAGGCCGAAGGGTTGGATGAATGAAATTTTAATTAAAAGGTGCATGGATGAGAAGGCAGGTGTAAGGAAGGCTGCACTTCTTTTAATTACCAAGTTGATAGCCATTCTAGGTAGTGACTTTGATGGAGGCTTGCTCAAGACAATGGGCATGGCTTGTTCTGATCCACTTGTTAGCATACGTAAAACAGCAATTTCAGCTCTTTCAGCGGCCTTCAGAACATTCCTGGATGAAAGGGTGGCTACTGAGTGGCTACACTCTGTTCCACGCTTAATTGCTGATAACGAGTCTAGCATTCAAGAAGAATGTGAGAACTTGTTTCTAGAACTGGTATTGGAACGGGTATCTACAGCGTCTGTTAGTCCTCTTCATGATGAATCCAGGTTTCGTAATTCAAATAAAGCAAAAGATTTGGAAATGGATGTTGACTCAGTGTTTCCTGAAGGAGTTTTGAGTCTTTTGAAAGAGATTTGCAATGGAGAGGTGACACCTTGGGTGAAGAAAATTTGCACAAACCTGGGAAAGAAGAAATTGATGAAGCACAAATTTGCTATTTCTCTTCAGAATATCATAAGGACATCTGAGTCTCTGTGGCTCAGTAAATCCATGCCAATAGAGAAATGGACAGCCCCACCTGGCTCTTGGTTTCTTCTATCAGAGGTGTCAGCATACCTTGCAAAAGCAGTCAACTGGGAGTTTCTCCATCATCATTGGGAGCTCTTTGACAAGTATGGCATGGGAGGGGAAATTCAAAGCCCATTTGCACAAGGATATGCATGTGAAGAGGAAGATGGTATAGATTCCACTTCTGTTGCTTGGGCTGGGGATCGTGTTTTTCTCTTACAGACAATCTCTAATGTTTCTGTTGAGCTGCCCCCTGAACTTGCAGCAGATTTAGCTCATAATATGCTCAAAAGAATTGAAGATTTCAACATGCATTCAACAGAGATTAATGCTCATGTAAAAGCACTCAGAACATTGTGCAAGCGGAAGGCTTCAAACTCAGAGGAGGCTGATACCCTTGTTATGAAATGGGCACACCAGCTTATCTCAAAAGCTTCTCAGATTTTAGAGAAGTTTATTTTGGATGATTCAGATGCAAAAAGAAAAGGAGACTTCTTTACGCCACCTAGAAGTGGGACTAGAAAAGGCAAGAGAGCTATGGCCATGTCGAGGTCATTGTCAGAAGCAGTCACAGCAGCTTACACCATTGGGTCTTTGGTTATCATCTGTCCATCTGCTGATATGACCACCGCCATTCCACTACTATACACCATAATCACTTCTGGGAATTCTGATCCAAAAGCTGATAAATTAACAAGGCCCAAAAGCTCTGTAAATCAGACAGCCCCGTCTTTGTACATCCAAGCATGGCTGACTTTGGGGAAGATTTGCCTTGCAGATGGAAAAATTGCAAAGAGTTATATCCCTCTGTTTGTGAAGGAACTTGAAAAGAGTGATAGTGCAGCACTTCGCAACAATTTGGTAGTGATGATGGCAGATTTTTGTGTTCGCTACACTGCTTTAGTTGATAGTTATATACCAAAGATCACAAAGTGTCTCCGTGATCCATGCGAACTTGTAAGAAGGCAGACATTTATACTTCTCTCGAGATTGTTGCAGAGGGACTATGTGAAGTGGAGAGGAGTTATGTTCCTTAGATTTCTTTTGTCCCTTGTTGATGAGTCAGAGAAGATAAGGCAGCTTGCTAATTTTCTCTTTAACAATATTCTGAAAGTCAAGGCACCACTTCTAGGATATAACAGTTTTGTAGAAGCAATTTTTGTTCTGAATGACTGCCATCTCCACAATGGACACAGTAATGCTCAGGGATCACGAGCAGAGAGCCGGCTTTTTTCCATCAGGGGCAATGATGAAAATTCAAGGTCTAAAAGAATGCAGATCTATGTTACTTTGCTAAAACAAATGGCTCCAGAGCACTTATTGGCTACCTTTGCAAAGTTATGTGCAGAGATTCTTGCTGCAGCATCTGATGGTATGCTCTATATAGATGATATTACTGGGCAGTCTGTTCTCAAGGATGCTTTCCAAATTCTCGCCTGCAAAGAGATCCGAATTCCATCCAACCGAGGATCATCAGCTGACACTGGAGACATTGATGAAGAAGGCGGTGATAATGGTGGAGCATCTGCCAAGGGAAGGATAACTCAAGCAGTAAAAAAGGGCCTCATCCAAAACACAGTACCCATCTTTATAGAGCTGAAAAGGCTATTGGAAATAAAAAACAGCCCCCTCATTGGCTCCCTCATGGAATGCCTCCGTATCATCCTCAAGGATTACAAGAATGAGATTGAAGACATATTGGTTGCCGATAAGCAGCTCCAGAAAGAGCTCATATATGACATGCAGAAGTATGAAGCAGCAAAGGCCAAATCAACAGCTGCTGAGGCTGTTGCCAACAGCAAGAAAACAATTAGCTTCAACTCGCCCGTTGTATCTAAGATTGAGAGTGTAAGACATGCCCAAAACAAGTTTGGTAGCAAACTCCAAGGTGACTCACAATTGGCCTCAGCAATGGCTGATGCAGCTGCTGAAGCCACAGCAAGGTCAGTGCTCAAGGAAGTGAACAAGGGGTTACAGTCACCGCCTCTTAGCGCTCTGAGCGTGCCTAAACTCAAGACATGCCAAGGAGGACGCAGCGGTCACAGTGATCTTCCCTTTGACGTCTTAGAATCTGTGAGGAAAAGACAGAACTTTGACTTTAATGAAGAGAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1347

Amino Acids

149.21

Weight (kDa)

7.12

Isoelectric Point (pI)

44.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012287)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1352
AasI GACNNNNNNGTC 3 cut(s) 1885, 2653, 3963
AatII GACGTC 1 cut(s) 3990
Acc36I ACCTGC 1 cut(s) 1352
AccB1I GGYRCC 2 cut(s) 913, 3046
AccI GTMKAC 1 cut(s) 276
AccIII TCCGGA 1 cut(s) 589
AclI AACGTT 1 cut(s) 1168
AclWI GGATC 7 cut(s) 1460, 2136, 2594, 2864, 3142, 3367, 3403
AcoI YGGCCR 2 cut(s) 849, 2466
AcuI CTGAAG 5 cut(s) 770, 1501, 1764, 1847, 3876
AcyI GRCGYC 1 cut(s) 3987
AdeI CACNNNGTG 1 cut(s) 2859
AfaI GTAC 4 cut(s) 247, 899, 2663, 3507
AfeI AGCGCT 1 cut(s) 3919
AjnI CCWGG 5 cut(s) 385, 1527, 1682, 1818, 1936
AjuI GAANNNNNNNTTGG 6 cut(s) 1118, 1150, 2369, 2401, 3518, 3550
Alw21I GWGCWC 7 cut(s) 36, 180, 695, 2022, 3243, 3657, 3879
Alw26I GTCTC 5 cut(s) 777, 1893, 2409, 2867, 3408
AlwI GGATC 7 cut(s) 1460, 2136, 2594, 2864, 3142, 3367, 3403
AlwNI CAGNNNCTG 4 cut(s) 1658, 3293, 3707, 3854
Ama87I CYCGRG 2 cut(s) 933, 2911
Aor13HI TCCGGA 1 cut(s) 589
Aor51HI AGCGCT 1 cut(s) 3919
AseI ATTAAT 1 cut(s) 2253
AspLEI GCGC 2 cut(s) 643, 3920
AsuC2I CCSGG 2 cut(s) 934, 935
AsuNHI GCTAGC 1 cut(s) 1037
AvaI CYCGRG 2 cut(s) 933, 2911
AvaII GGWCC 6 cut(s) 160, 366, 405, 580, 733, 988
BaeGI GKGCMC 2 cut(s) 472, 2341
BaeI ACNNNNGTAYC 2 cut(s) 2310, 2343
BalI TGGCCA 1 cut(s) 2468
BanI GGYRCC 2 cut(s) 913, 3046
BanII GRGCYC 5 cut(s) 36, 180, 933, 2022, 3657
BauI CACGAG 1 cut(s) 3138
BbsI GAAGAC 1 cut(s) 3624
Bbv12I GWGCWC 7 cut(s) 36, 180, 695, 2022, 3243, 3657, 3879
BbvCI CCTCAGC 2 cut(s) 3708, 3832
BceAI ACGGC 2 cut(s) 228, 1185
BcgI CGANNNNNNTGC 2 cut(s) 2902, 2936
BciT130I CCWGG 5 cut(s) 387, 1529, 1684, 1820, 1938
BcnI CCSGG 2 cut(s) 934, 935
BcoDI GTCTC 5 cut(s) 777, 1893, 2409, 2867, 3408
BfaI CTAG 8 cut(s) 1038, 1076, 1412, 1593, 1625, 2433, 2445, 3056
BfmI CTRYAG 3 cut(s) 945, 1650, 3285
BfoI RGCGCY 2 cut(s) 644, 3921
BfuAI ACCTGC 1 cut(s) 1352
BglII AGATCT 1 cut(s) 3204
Bme1390I CCNGG 7 cut(s) 387, 934, 935, 1529, 1684, 1820, 1938
Bme18I GGWCC 6 cut(s) 160, 366, 405, 580, 733, 988
BmeT110I CYCGRG 2 cut(s) 933, 2911
BmiI GGNNCC 7 cut(s) 368, 406, 407, 915, 3048, 3234, 3565
BmrFI CCNGG 7 cut(s) 387, 934, 935, 1529, 1684, 1820, 1938
BmrI ACTGGG 2 cut(s) 2002, 3333
BmsI GCATC 7 cut(s) 385, 450, 2389, 3299, 3334, 3458, 3835
BmtI GCTAGC 1 cut(s) 1041
BmuI ACTGGG 2 cut(s) 2002, 3333
BpiI GAAGAC 1 cut(s) 3624
BplI GAGNNNNNCTC 4 cut(s) 167, 199, 1422, 1454
BpmI CTGGAG 5 cut(s) 369, 1209, 3219, 3432, 3629
Bpu10I CCTNAGC 4 cut(s) 723, 3129, 3708, 3832
BpuMI CCSGG 2 cut(s) 934, 935
BsaAI YACGTR 1 cut(s) 1484
BsaHI GRCGYC 1 cut(s) 3987
BsaWI WCCGGW 2 cut(s) 589, 916
BsaXI ACNNNNNCTCC 2 cut(s) 164, 194
Bse118I RCCGGY 2 cut(s) 363, 3150
Bse1I ACTGG 5 cut(s) 632, 1635, 1997, 3328, 3415
Bse3DI GCAATG 5 cut(s) 744, 1297, 1783, 3178, 3843
BseAI TCCGGA 1 cut(s) 589
BseBI CCWGG 5 cut(s) 387, 1529, 1684, 1820, 1938
BseMI GCAATG 5 cut(s) 744, 1297, 1783, 3178, 3843
BseNI ACTGG 5 cut(s) 632, 1635, 1997, 3328, 3415
BseRI GAGGAG 5 cut(s) 172, 281, 338, 2324, 2961
BseSI GKGCMC 2 cut(s) 472, 2341
BseYI CCCAGC 1 cut(s) 2123
BsgI GTGCAG 4 cut(s) 298, 1362, 2787, 3291
Bsh1285I CGRYCG 1 cut(s) 222
BshNI GGYRCC 2 cut(s) 913, 3046
BsiEI CGRYCG 1 cut(s) 222
BsiHKAI GWGCWC 7 cut(s) 36, 180, 695, 2022, 3243, 3657, 3879
BsiHKCI CYCGRG 2 cut(s) 933, 2911
BsiSI CCGG 5 cut(s) 364, 590, 917, 934, 3151
BslFI GGGAC 6 cut(s) 175, 352, 391, 2455, 2942, 2959
BsmAI GTCTC 5 cut(s) 777, 1893, 2409, 2867, 3408
BsmFI GGGAC 6 cut(s) 175, 352, 391, 2455, 2942, 2959
BsmI GAATGC 4 cut(s) 1596, 2239, 3204, 3581
BsoBI CYCGRG 2 cut(s) 933, 2911
Bsp13I TCCGGA 1 cut(s) 589
Bsp1407I TGTACA 1 cut(s) 2661
Bsp19I CCATGG 3 cut(s) 231, 330, 400
BspEI TCCGGA 1 cut(s) 589
BspHI TCATGA 1 cut(s) 1672
BspLI GGNNCC 7 cut(s) 368, 406, 407, 915, 3048, 3234, 3565
BspMAI CTGCAG 1 cut(s) 3289
BspMI ACCTGC 1 cut(s) 1352
BspOI GCTAGC 1 cut(s) 1041
BspPI GGATC 7 cut(s) 1460, 2136, 2594, 2864, 3142, 3367, 3403
BspT107I GGYRCC 2 cut(s) 913, 3046
BsrDI GCAATG 5 cut(s) 744, 1297, 1783, 3178, 3843
BsrFI RCCGGY 2 cut(s) 363, 3150
BsrGI TGTACA 1 cut(s) 2661
BsrI ACTGG 5 cut(s) 632, 1635, 1997, 3328, 3415
BssAI RCCGGY 2 cut(s) 363, 3150
BssNI GRCGYC 1 cut(s) 3987
BssSI CACGAG 1 cut(s) 3138
BssT1I CCWWGG 7 cut(s) 231, 330, 400, 1793, 3456, 3811, 3949
Bst2BI CACGAG 1 cut(s) 3138
Bst2UI CCWGG 5 cut(s) 387, 1529, 1684, 1820, 1938
Bst4CI ACNGT 7 cut(s) 538, 619, 3068, 3122, 3505, 3903, 3971
Bst6I CTCTTC 8 cut(s) 291, 326, 422, 498, 1674, 1866, 2079, 4026
BstACI GRCGYC 1 cut(s) 3987
BstAPI GCANNNNNTGC 2 cut(s) 703, 1976
BstAUI TGTACA 1 cut(s) 2661
BstBAI YACGTR 1 cut(s) 1484
BstC8I GCNNGC 9 cut(s) 695, 807, 1039, 1436, 2288, 3009, 3152, 3364, 3929
BstDSI CCRYGG 3 cut(s) 231, 330, 400
BstH2I RGCGCY 2 cut(s) 644, 3921
BstHHI GCGC 2 cut(s) 643, 3920
BstMAI GTCTC 5 cut(s) 777, 1893, 2409, 2867, 3408
BstMCI CGRYCG 1 cut(s) 222
BstNI CCWGG 5 cut(s) 387, 1529, 1684, 1820, 1938
BstNSI RCATGY 5 cut(s) 2082, 2239, 3670, 3785, 3948
BstSCI CCNGG 7 cut(s) 385, 932, 933, 1527, 1682, 1818, 1936
BstSFI CTRYAG 3 cut(s) 945, 1650, 3285
BstSLI GKGCMC 2 cut(s) 472, 2341
BstSNI TACGTA 1 cut(s) 1484
BstV2I GAAGAC 1 cut(s) 3624
BstX2I RGATCY 2 cut(s) 3204, 3372
BstXI CCANNNNNNTGG 1 cut(s) 238
BstYI RGATCY 2 cut(s) 3204, 3372
BtgI CCRYGG 3 cut(s) 231, 330, 400
BtsI GCAGTG 2 cut(s) 885, 2820
BtsIMutI CAGTG 7 cut(s) 639, 885, 1740, 2820, 3408, 3879, 3976
BveI ACCTGC 1 cut(s) 1352
Cac8I GCNNGC 9 cut(s) 695, 807, 1039, 1436, 2288, 3009, 3152, 3364, 3929
CaiI CAGNNNCTG 4 cut(s) 1658, 3293, 3707, 3854
CciI TCATGA 1 cut(s) 1672
CfoI GCGC 2 cut(s) 643, 3920
Cfr10I RCCGGY 2 cut(s) 363, 3150
Cfr9I CCCGGG 1 cut(s) 933
CseI GACGC 3 cut(s) 865, 1644, 3966
Csp6I GTAC 4 cut(s) 246, 898, 2662, 3506
CspCI CAANNNNNGTGG 2 cut(s) 2095, 2130
CviQI GTAC 4 cut(s) 246, 898, 2662, 3506
DraIII CACNNNGTG 1 cut(s) 2859
DrdI GACNNNNNNGTC 3 cut(s) 1885, 2653, 3963
DseDI GACNNNNNNGTC 3 cut(s) 1885, 2653, 3963
EaeI YGGCCR 2 cut(s) 849, 2466
Eam1104I CTCTTC 8 cut(s) 291, 326, 422, 498, 1674, 1866, 2079, 4026
EarI CTCTTC 8 cut(s) 291, 326, 422, 498, 1674, 1866, 2079, 4026
EciI GGCGGA 2 cut(s) 35, 217
Ecl136II GAGCTC 4 cut(s) 34, 178, 2020, 3655
Eco105I TACGTA 1 cut(s) 1484
Eco130I CCWWGG 7 cut(s) 231, 330, 400, 1793, 3456, 3811, 3949
Eco24I GRGCYC 5 cut(s) 36, 180, 933, 2022, 3657
Eco47I GGWCC 6 cut(s) 160, 366, 405, 580, 733, 988
Eco47III AGCGCT 1 cut(s) 3919
Eco53kI GAGCTC 4 cut(s) 34, 178, 2020, 3655
Eco57I CTGAAG 5 cut(s) 770, 1501, 1764, 1847, 3876
Eco88I CYCGRG 2 cut(s) 933, 2911
EcoICRI GAGCTC 4 cut(s) 34, 178, 2020, 3655
EcoO109I RGGNCCY 2 cut(s) 405, 3487
EcoRI GAATTC 3 cut(s) 1108, 2593, 3378
EcoRII CCWGG 5 cut(s) 385, 1527, 1682, 1818, 1936
EcoT14I CCWWGG 7 cut(s) 231, 330, 400, 1793, 3456, 3811, 3949
EcoT22I ATGCAT 2 cut(s) 2080, 2241
EcoT38I GRGCYC 5 cut(s) 36, 180, 933, 2022, 3657
ErhI CCWWGG 7 cut(s) 231, 330, 400, 1793, 3456, 3811, 3949
FaqI GGGAC 6 cut(s) 175, 352, 391, 2455, 2942, 2959
FauI CCCGC 1 cut(s) 798
FblI GTMKAC 1 cut(s) 276
FriOI GRGCYC 5 cut(s) 36, 180, 933, 2022, 3657
FspBI CTAG 8 cut(s) 1038, 1076, 1412, 1593, 1625, 2433, 2445, 3056
GlaI GCGC 2 cut(s) 642, 3919
GsaI CCCAGC 1 cut(s) 2127
GsuI CTGGAG 5 cut(s) 369, 1209, 3219, 3432, 3629
HaeII RGCGCY 2 cut(s) 644, 3921
HapII CCGG 5 cut(s) 364, 590, 917, 934, 3151
HgaI GACGC 3 cut(s) 865, 1644, 3966
HhaI GCGC 2 cut(s) 643, 3920
Hin1I GRCGYC 1 cut(s) 3987
Hin6I GCGC 2 cut(s) 641, 3918
HinP1I GCGC 2 cut(s) 641, 3918
HincII GTYRAC 3 cut(s) 1060, 1729, 1990
HindII GTYRAC 3 cut(s) 1060, 1729, 1990
HindIII AAGCTT 1 cut(s) 2358
HpaII CCGG 5 cut(s) 364, 590, 917, 934, 3151
Hpy166II GTNNAC 7 cut(s) 277, 534, 1060, 1126, 1729, 1990, 3889
Hpy8I GTNNAC 7 cut(s) 277, 534, 1060, 1126, 1729, 1990, 3889
Hpy99I CGWCG 2 cut(s) 143, 176
HpyCH4III ACNGT 7 cut(s) 538, 619, 3068, 3122, 3505, 3903, 3971
HpyCH4IV ACGT 4 cut(s) 411, 1168, 1483, 3987
HpySE526I ACGT 4 cut(s) 411, 1168, 1483, 3987
Hsp92I GRCGYC 1 cut(s) 3987
HspAI GCGC 2 cut(s) 641, 3918
KflI GGGWCCC 1 cut(s) 405
Kpn2I TCCGGA 1 cut(s) 589
KroI GCCGGC 1 cut(s) 3150
KroNI GCCGGC 1 cut(s) 3152
LmnI GCTCC 5 cut(s) 2017, 3238, 3446, 3569, 3648
LweI GCATC 7 cut(s) 385, 450, 2389, 3299, 3334, 3458, 3835
MaeI CTAG 8 cut(s) 1038, 1076, 1412, 1593, 1625, 2433, 2445, 3056
MaeII ACGT 4 cut(s) 411, 1168, 1483, 3987
MfeI CAATTG 1 cut(s) 3824
MflI RGATCY 2 cut(s) 3204, 3372
MlsI TGGCCA 1 cut(s) 2468
MluNI TGGCCA 1 cut(s) 2468
MlyI GAGTC 9 cut(s) 876, 959, 1018, 1598, 1724, 1765, 1895, 2996, 3812
MmeI TCCRAC 3 cut(s) 531, 1298, 3411
Mox20I TGGCCA 1 cut(s) 2468
Mph1103I ATGCAT 2 cut(s) 2080, 2241
MroI TCCGGA 1 cut(s) 589
MroNI GCCGGC 1 cut(s) 3150
MscI TGGCCA 1 cut(s) 2468
MslI CAYNNNNRTG 1 cut(s) 3123
Msp20I TGGCCA 1 cut(s) 2468
MspA1I CMGCKG 6 cut(s) 1225, 1511, 3404, 3704, 3851, 3963
MspI CCGG 5 cut(s) 364, 590, 917, 934, 3151
MspR9I CCNGG 7 cut(s) 387, 934, 935, 1529, 1684, 1820, 1938
MunI CAATTG 1 cut(s) 3824
Mva1269I GAATGC 4 cut(s) 1596, 2239, 3204, 3581
MvaI CCWGG 5 cut(s) 387, 1529, 1684, 1820, 1938
NaeI GCCGGC 1 cut(s) 3152
NciI CCSGG 2 cut(s) 934, 935
NcoI CCATGG 3 cut(s) 231, 330, 400
NgoMIV GCCGGC 1 cut(s) 3150
NheI GCTAGC 1 cut(s) 1037
NlaIV GGNNCC 7 cut(s) 368, 406, 407, 915, 3048, 3234, 3565
NmeAIII GCCGAG 1 cut(s) 778
NsiI ATGCAT 2 cut(s) 2080, 2241
NspI RCATGY 5 cut(s) 2082, 2239, 3670, 3785, 3948
PacI TTAATTAA 1 cut(s) 1338
PaeR7I CTCGAG 1 cut(s) 2911
PagI TCATGA 1 cut(s) 1672
PaqCI CACCTGC 1 cut(s) 1352
PcsI WCGNNNNNNNCGW 1 cut(s) 135
PctI GAATGC 4 cut(s) 1596, 2239, 3204, 3581
PdiI GCCGGC 1 cut(s) 3152
PfoI TCCNGGA 1 cut(s) 1527
Ple19I CGATCG 1 cut(s) 222
PleI GAGTC 9 cut(s) 875, 958, 1018, 1597, 1724, 1764, 1894, 2995, 3812
PpsI GAGTC 9 cut(s) 875, 958, 1018, 1597, 1724, 1764, 1894, 2995, 3812
Ppu21I YACGTR 1 cut(s) 1484
PpuMI RGGWCCY 1 cut(s) 405
PshBI ATTAAT 1 cut(s) 2253
Psp124BI GAGCTC 4 cut(s) 36, 180, 2022, 3657
Psp1406I AACGTT 1 cut(s) 1168
Psp5II RGGWCCY 1 cut(s) 405
Psp6I CCWGG 5 cut(s) 385, 1527, 1682, 1818, 1936
PspFI CCCAGC 1 cut(s) 2123
PspGI CCWGG 5 cut(s) 385, 1527, 1682, 1818, 1936
PspN4I GGNNCC 7 cut(s) 368, 406, 407, 915, 3048, 3234, 3565
PspPPI RGGWCCY 1 cut(s) 405
PstI CTGCAG 1 cut(s) 3289
PstNI CAGNNNCTG 4 cut(s) 1658, 3293, 3707, 3854
PsuI RGATCY 2 cut(s) 3204, 3372
PvuI CGATCG 1 cut(s) 222
PvuII CAGCTG 4 cut(s) 1225, 3404, 3704, 3851
RsaI GTAC 4 cut(s) 247, 899, 2663, 3507
RsaNI GTAC 4 cut(s) 246, 898, 2662, 3506
RseI CAYNNNNRTG 1 cut(s) 3123
SacI GAGCTC 4 cut(s) 36, 180, 2022, 3657
SchI GAGTC 9 cut(s) 876, 959, 1018, 1598, 1724, 1765, 1895, 2996, 3812
ScrFI CCNGG 7 cut(s) 387, 934, 935, 1529, 1684, 1820, 1938
SfaNI GCATC 7 cut(s) 385, 450, 2389, 3299, 3334, 3458, 3835
SfcI CTRYAG 3 cut(s) 945, 1650, 3285
Sfr274I CTCGAG 1 cut(s) 2911
SinI GGWCC 6 cut(s) 160, 366, 405, 580, 733, 988
SlaI CTCGAG 1 cut(s) 2911
SmaI CCCGGG 1 cut(s) 935
SmiMI CAYNNNNRTG 1 cut(s) 3123
SnaBI TACGTA 1 cut(s) 1484
SspI AATATT 1 cut(s) 3031
SspMI CTAG 8 cut(s) 1038, 1076, 1412, 1593, 1625, 2433, 2445, 3056
SstI GAGCTC 4 cut(s) 36, 180, 2022, 3657
StyD4I CCNGG 7 cut(s) 385, 932, 933, 1527, 1682, 1818, 1936
StyI CCWWGG 7 cut(s) 231, 330, 400, 1793, 3456, 3811, 3949
TaaI ACNGT 7 cut(s) 538, 619, 3068, 3122, 3505, 3903, 3971
TaiI ACGT 4 cut(s) 414, 1171, 1486, 3990
TaqI TCGA 6 cut(s) 19, 36, 835, 1195, 2474, 2912
TatI WGTACW 1 cut(s) 2661
TauI GCSGC 4 cut(s) 419, 441, 851, 1514
TscAI CASTG 7 cut(s) 639, 885, 1740, 2827, 3415, 3879, 3976
TspGWI ACGGA 3 cut(s) 203, 2855, 3572
TspMI CCCGGG 1 cut(s) 933
TspRI CASTG 7 cut(s) 639, 885, 1740, 2827, 3415, 3879, 3976
VpaK11BI GGWCC 6 cut(s) 160, 366, 405, 580, 733, 988
VspI ATTAAT 1 cut(s) 2253
XbaI TCTAGA 1 cut(s) 1624
XceI RCATGY 5 cut(s) 2082, 2239, 3670, 3785, 3948
XcmI CCANNNNNNNNNTGG 5 cut(s) 1920, 1941, 2518, 3110, 3794
XhoI CTCGAG 1 cut(s) 2911
XmaI CCCGGG 1 cut(s) 933
XmiI GTMKAC 1 cut(s) 276
XspI CTAG 8 cut(s) 1038, 1076, 1412, 1593, 1625, 2433, 2445, 3056
ZraI GACGTC 1 cut(s) 3988
Zsp2I ATGCAT 2 cut(s) 2080, 2241
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.