FvH4_4g18310

Condensin-2 complex subunit

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0012287
Physical Location & Seq
Forward (+)
22252162 .. 22258613
6452 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g18310.t1

Sequence Viewer

Length: 3975 bp
ATGGACGAATCCATAGCCCGAATAGTCACAGAGCTCGAAGACCTCCGCCACCTCGAAAACCCCGCCAACACCCAAACCCAACCCATCTCCGATTCCACTCTCTCCGATCTCCAAACCCTCCTCGACGCCGCCGCCGACGAAAATGACCCCGAAAACCCCATGGACCGCTTCTCCGACGAGCTCGCCTCCAAGTCCCTCTCCCTCACCAGCCTCGTCCGCCCGATCTCCGCCGCCATGGACTCCGGCCCGGCCCATTTCACCCTCGCCGCCTCCAAGCTCTACCTCTCCCTCCTCCTCTCCCCCAATTCCCCCGTCTGCACTCTCTTCACTCCCATGGCGTTCTTCTCTCTCCTCCAGTCGATTCGCCGCTCGCTGAAGCACCGCCGCGCCGAGCCGGGCGAGCCGGGCTCTGGGTCCGGTGGCGCCAAGAAGCGAAAGGCGCGTGGCAAAGGTAAGGGTTTGAGGAACAGCGAGGATTGTGAGAGCGAAGAGAGAGAGTTTGATGTTAGGGTTTTGTTTTCGGTGCTTGAGAAATTGGAATTGGTGATGGATTTTGTTCATTTGGAGCGGTTTCCGGATAGCTTGAAGTCGCTGGTTCAAACCGTGGCGGAGATTCCAGGGATGGGGTTTGATGTGTGCGGCAATTCTGGTAGTTTTAACAAATTGACTGGTTTGTGCTCCAGGGTTTTGCTTAAGGTGTTTGAGCTGGAGCATGGAGACCATGCTAATATTGCGGCTGAGGTGTTCAAATCATTGACGCCGATGATTCTTCAGCATAAATCACAGGTTCGGATATTCGCGTTGAGTTTTGTGGGGAATCAGATGATGAATGTGGCTAGGAATCTTCAGGGGGTGAAGAAAGCAATGGTGAATTTCCTGTGGTACTTGGTCCACAAGGCGCCGGATAAGTCTGAGCCTAGGGCTTTGGCGGTCGAGTCTATAATGGAGATTGTTAGAGTTATGGAGGTTGAGGAGCAAGTTGGGTTTGTGGAGTATGTGGTGAAGATGACTCAAGGGAAGGCTAGGTTGAGGCTTTTGGCTGTTGACCTTATTCTGGTGCTGGTTACTTCTTTGAGAGGTGTGATGGGTCTGAATTCGGAGAGTGAGGTTAGGGATTCGTTGGGTTGGAAATGCTTGGAGGCTTTGATTCAGCGATGTTCGGATGCAATGGCTGGGATTCGTGCTCGTGGTTTGTCGAATTTGTCACAGCTGGTTGGCTTCTTGTCAGGTGATGATAGGAGCCGGACTGTGTTGAAAGAGGTTATGGGGTTTGGTGATGAAATGGATGAAAGGCAGGAGGGTTGGATGAATGAGATTTTGAGGGCAAGGTGTATGGATGAGAAGGCAGCTGTAAGGAAGGCTGCACTTCTTTTGGTTACCAAGTTGATGGCTATTCTTGGTAGTGGTTTTGATAGAGCCTTGATCAAGACTATGGGCATGGCTTGTTCTGATCCACTTGTTAGCATTCGCAAAGCGGCAATTTCAGCTCTTTCAGTGGCTTTTAGAACATTCCTGGATAATAGCGTGGCTATTGAGTGGCTACATTCTGTTCCAGCTTTAATAAGTGATAATGAGTCTAGCATTCAAGAAGAATGTGAAAACTTGTTTGTAGAGCTTGTTCTAGAACGGGTTTCTACAGTTGGTTCTGAAATCAATACTGGCTCAGTACTTCCTGAAGGAGAATTAGGCCTTCTGAAGGAGATTTGCAATGGAGAAGTGGCACCTTGGGTGAAGAAAATTTGCACAAACTTGGGAAAGAAGAATCGACTGAAGCACAAATATGCTACTGCACTTCAGAGTATTATAAGGACATCTGAGTCTCTCTGGCTCAATCAATCCATGCCTATAGAGAAATGGACAGCCCCACCAGGTTCTTGGTTTCTTCTGTCAGAGTTGTCAGCATACCTTGCCAAAGCAGTTGAATGGGAGTTTCTCCGTCATCATTGGCAGCTCTTTGACAAGCATGGAGTGGGAGGGGAGATTCAGAGTCCCCTTCCACAAGGGTGTGCACATGAAGAGGGAGGGCGTTTACAATCCAATTCTGTTGCTTGGGCTGGGGATCGTGTTTTTCTTTTACAGACTATTTCTAATGTTTCCATTGAGCTGCCTTCTGAAGTTGGTGCAGAGTTAGCTCATGACTTGCTTAGAAGAATTCAAAATTTTAACATGCATTCAACAGAGGTTAATGCTCATGTAAAAGCATTCAGAACATTGTGCAAGCGGAAGGTTCCAGATCCGGAAGCGGCTGATGCACTTGTTAAAAAATGCGTACATGAGATTGCTTCAAAAGCTTCCAATATTTTAGGTAATTATATATCCAAGGAGTCAGAAACAACCAGAAAAGGTGGCTTCTTTACACCACCTATTAGTGGGAGTAAAATGGGCAAGAGAGCCATAACGATGTCCAAGTCTTTGTCAAAAGTAGTGACAGCAGTCTACACAATTGGGTCTTTGGTTATTATTTGTCCATCTGCTGATATGAGGGGCATCATTGATCTACTATATACCGTCATCACATCTGGGAATTCGGATCCAAAAGTCAATAAAGTATCAAGCTCTACTATCTCTCTGAAGCATACAGCACCTTCTTTGTACATTCAAGCATGGTTGACTCTGGGGAAGATTTGCCTTACAGATGAAAAAACTGCAAAGAAGTATATTCCTCTCTTTGTGCAGGAACTTGAAAAGAGTGATTGTGCAGCCCTTCGCAACAATCTGGTAGTTGTGATGGCAGATTTTTGCATTCGTCATACTTCTTTGGTTGATAGTTACATACCAAGGATCACAAAATGCCTCCGTGATCCATGTGAACTTGTAAGAAGGCAGACATTTATACTTCTCTCAAGATTGTTGCAGAGGGATTATGTGAAGTGGAGAGGAGTTCTTTTTCTTAGATTTCTCTTGTCACTTGTTGATGAGTCAGAAAAGATAAAGCAGCTTGCCAATTTTCTCTTCAGCAATATTTTGAAAGCTAAGGCGCCTCTTCTCGGATACAATAGTTTTGTAGAAGCAATATTTGTTCTAAATGACTGCCGTGCCCACAAGGGACACGCTGGTGGTCATGGTTCACGAGCAGAGAGCCGCCTTTTTTCCATCAGGGGAAATGATGAAACTTCGAGGTCTAGAAGAATGCATATATATGTTTCTTTGCTCAAACAAATGGCTCCAGAGCACTTATTGCAAACGTTTGTAAAGTTATGTACGGAAATCCTTGCGGCAGCATCTGATGGCATGCTCAATCTAGATGATATTACTGGGCAGTCTGTTTTGCAGGATGCTTTCCAAATCATTGCCTGCAAAGAAATCAGAATACCATCCAATCGTGGGTTATCATCTGATGCTGGAGATATTGATGAAGAAGGTGCTGATAATGGTGGAGCAGCTGCTAAGGGAAGGGCAATAACTCAAGCACTCAAAAAGGGCCTCATCCAAAGCACAATACCCATTTTTATAGAACTGAAACGGCTATTGGAAAGCAAAAACAGCCCCCTCATAGGCTCCCTCATGGAATGCCTCCGCATCATCCTCAAGGATTACAGAAATGAGATCGAAGATATATTAGTTGCTGATAAGCAGCTCCAGAAAGAGCTGATATATGACATGCAGAAGTACGAAAAGGCAAAGACCAAGTCTACTGCAGCTGAGACTGTAGCCACCCATCAAAGAACAGTTAGCTTTCACTCTCCCGGCATATCCAAGATAGCAAGCGTGAGACAGGCGCATAACAAATCCATTGGCAGATTGCAAGGCGACGTAAGATTGGCTTCGGCAATGGGAGATGTAGCTGCTGAAGCCGTAGCAAGGTCAGTGCTCAAGGACATGAACAAGGGTAGACAGACACCACCTCTCAGCGCTTTAAGCGTACCTAAACTCAAGACCTGCGAGGGAGGACAAACCTCTCGAAGTGGTGTGCCGTTAAATGTATTGGAATCTGTAAGAAGACGACAGAATTTTGACTTTGTTGAAGAGAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Cnd1

Protein Analysis

1325

Amino Acids

146.35

Weight (kDa)

8.6

Isoelectric Point (pI)

45.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Cnd1 PF12717 902 - 1076 1.5e-18 non-SMC mitotic condensation complex subunit 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0012287)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G15890 AT4G15890
fragaria_vesca FvH4_4g18310
malus_domestica MD16G1167900.v1.1
prunus_persica Prupe.1G134700_v2.0.a1 Prupe.1G134700_v2.0.a1 Prupe.1G134700_v2.0.a1 Prupe.1G134700_v2.0.a1
pyrus_communis pycom16g14150
rosa_chinensis RchiOBHm_Chr4g0422791
rosa_laevigata RLG00000007605
rosa_multiflora Rmu_sc0000830.1_g000049
rosa_roxburghii Rroxscaffold_5G00364640
rosa_rugosa Rorug04G0181400
rosa_samantha Rh4AG241800 Rh4BG245200 Rh4CG255700 Rh4DG240400
rosa_wichuraiana Rw4G020810

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1805
AasI GACNNNNNNGTC 1 cut(s) 1816
Acc36I ACCTGC 1 cut(s) 3887
AccB1I GGYRCC 4 cut(s) 422, 898, 1720, 2977
AccBSI CCGCTC 2 cut(s) 369, 568
AccI GTMKAC 3 cut(s) 2436, 3632, 3832
AccII CGCG 3 cut(s) 387, 442, 800
AccIII TCCGGA 2 cut(s) 574, 2236
AclI AACGTT 1 cut(s) 3185
AclWI GGATC 7 cut(s) 1445, 2067, 2228, 2525, 2538, 2789, 2795
AcsI RAATTY 8 cut(s) 871, 1093, 1198, 1737, 2151, 2158, 2524, 3949
AcyI GRCGYC 5 cut(s) 126, 423, 758, 899, 2978
AfaI GTAC 7 cut(s) 884, 1668, 2271, 2594, 3202, 3611, 3864
AfeI AGCGCT 1 cut(s) 3853
AfiI CCNNNNNNNGG 9 cut(s) 410, 623, 1054, 1696, 2369, 2987, 3324, 3494, 3801
AflII CTTAAG 1 cut(s) 692
AjnI CCWGG 4 cut(s) 616, 680, 1512, 1867
AjuI GAANNNNNNNTTGG 6 cut(s) 524, 556, 2936, 2968, 3452, 3484
AleI CACNNNNGTG 2 cut(s) 2002, 3054
Alw21I GWGCWC 7 cut(s) 36, 183, 680, 1186, 2011, 3174, 3813
Alw26I GTCTC 4 cut(s) 711, 1824, 3638, 3706
Alw44I GTGCAC 1 cut(s) 2007
AlwI GGATC 7 cut(s) 1445, 2067, 2228, 2525, 2538, 2789, 2795
AlwNI CAGNNNCTG 1 cut(s) 3224
Aor13HI TCCGGA 2 cut(s) 574, 2236
Aor51HI AGCGCT 1 cut(s) 3853
AoxI GGCC 4 cut(s) 244, 249, 1687, 3421
ApaLI GTGCAC 1 cut(s) 2007
ApoI RAATTY 8 cut(s) 871, 1093, 1198, 1737, 2151, 2158, 2524, 3949
ArsI GACNNNNNNTTYG 2 cut(s) 3614, 3646
AspA2I CCTAGG 1 cut(s) 917
AspLEI GCGC 7 cut(s) 389, 425, 442, 901, 2980, 3721, 3854
AspS9I GGNCC 6 cut(s) 163, 245, 250, 414, 889, 3421
AsuC2I CCSGG 4 cut(s) 248, 396, 405, 3687
AsuHPI GGTGA 9 cut(s) 196, 250, 556, 865, 880, 1012, 1241, 1286, 1741
AvaII GGWCC 3 cut(s) 163, 414, 889
AvrII CCTAGG 1 cut(s) 917
BaeGI GKGCMC 2 cut(s) 2011, 3040
BaeI ACNNNNGTAYC 2 cut(s) 2983, 3016
BamHI GGATCC 1 cut(s) 2530
BanI GGYRCC 4 cut(s) 422, 898, 1720, 2977
BanII GRGCYC 3 cut(s) 36, 183, 410
BauI CACGAG 2 cut(s) 1185, 3069
BbsI GAAGAC 2 cut(s) 45, 3946
Bbv12I GWGCWC 7 cut(s) 36, 183, 680, 1186, 2011, 3174, 3813
BbvCI CCTCAGC 1 cut(s) 738
BceAI ACGGC 4 cut(s) 3018, 3479, 3779, 3898
BciT130I CCWGG 4 cut(s) 618, 682, 1514, 1869
BciVI GTATCC 1 cut(s) 2984
BclI TGATCA 1 cut(s) 1422
BcnI CCSGG 4 cut(s) 248, 396, 405, 3687
BcoDI GTCTC 4 cut(s) 711, 1824, 3638, 3706
BfaI CTAG 8 cut(s) 837, 918, 1023, 1578, 1622, 3123, 3242, 3973
BfmI CTRYAG 4 cut(s) 1635, 1845, 3636, 3648
BfoI RGCGCY 4 cut(s) 426, 902, 2981, 3855
BfrI CTTAAG 1 cut(s) 692
BfuAI ACCTGC 1 cut(s) 3887
BfuI GTATCC 1 cut(s) 2984
BlnI CCTAGG 1 cut(s) 917
BmcAI AGTACT 1 cut(s) 1668
Bme1390I CCNGG 8 cut(s) 248, 396, 405, 618, 682, 1514, 1869, 3687
Bme18I GGWCC 3 cut(s) 163, 414, 889
BmgT120I GGNCC 6 cut(s) 163, 245, 250, 414, 889, 3421
BmrFI CCNGG 8 cut(s) 248, 396, 405, 618, 682, 1514, 1869, 3687
BmrI ACTGGG 1 cut(s) 3264
BmsI GCATC 7 cut(s) 1153, 2239, 2496, 3230, 3265, 3328, 3528
BmuI ACTGGG 1 cut(s) 3264
BoxI GACNNNNGTC 1 cut(s) 2432
BpiI GAAGAC 2 cut(s) 45, 3946
BplI GAGNNNNNCTC 4 cut(s) 170, 202, 392, 424
BpmI CTGGAG 6 cut(s) 338, 664, 728, 3150, 3363, 3563
Bpu10I CCTNAGC 3 cut(s) 738, 2973, 3387
BpuEI CTTGAG 7 cut(s) 548, 996, 2827, 3390, 3512, 3797, 3857
BpuMI CCSGG 4 cut(s) 248, 396, 405, 3687
BsaHI GRCGYC 5 cut(s) 126, 423, 758, 899, 2978
BsaI GGTCTC 1 cut(s) 711
BsaWI WCCGGW 3 cut(s) 416, 574, 2236
BsaXI ACNNNNNCTCC 2 cut(s) 155, 185
Bsc4I CCNNNNNNNGG 9 cut(s) 410, 623, 1054, 1696, 2369, 2987, 3324, 3494, 3801
Bse1I ACTGG 4 cut(s) 355, 673, 1663, 3259
Bse3DI GCAATG 5 cut(s) 870, 1173, 1714, 3288, 3777
BseAI TCCGGA 2 cut(s) 574, 2236
BseBI CCWGG 4 cut(s) 618, 682, 1514, 1869
BseGI GGATG 9 cut(s) 627, 1168, 1291, 1311, 1342, 3280, 3314, 3426, 3522
BseLI CCNNNNNNNGG 9 cut(s) 410, 623, 1054, 1696, 2369, 2987, 3324, 3494, 3801
BseMI GCAATG 5 cut(s) 870, 1173, 1714, 3288, 3777
BseMII CTCAG 6 cut(s) 729, 903, 1677, 1806, 3633, 3862
BseNI ACTGG 4 cut(s) 355, 673, 1663, 3259
BseRI GAGGAG 6 cut(s) 110, 281, 284, 341, 986, 2892
BseSI GKGCMC 2 cut(s) 2011, 3040
BseYI CCCAGC 2 cut(s) 1172, 2054
BsgI GTGCAG 6 cut(s) 301, 1347, 1773, 2142, 2693, 2718
Bsh1236I CGCG 3 cut(s) 387, 442, 800
Bsh1285I CGRYCG 1 cut(s) 933
BshFI GGCC 4 cut(s) 246, 251, 1689, 3423
BshNI GGYRCC 4 cut(s) 422, 898, 1720, 2977
BsiEI CGRYCG 1 cut(s) 933
BsiHKAI GWGCWC 7 cut(s) 36, 183, 680, 1186, 2011, 3174, 3813
BslFI GGGAC 3 cut(s) 178, 1974, 3060
BslI CCNNNNNNNGG 9 cut(s) 410, 623, 1054, 1696, 2369, 2987, 3324, 3494, 3801
BsmAI GTCTC 4 cut(s) 711, 1824, 3638, 3706
BsmFI GGGAC 3 cut(s) 178, 1974, 3060
BsmI GAATGC 7 cut(s) 1464, 1581, 2170, 2201, 2742, 3135, 3515
BsnI GGCC 4 cut(s) 246, 251, 1689, 3423
Bso31I GGTCTC 1 cut(s) 711
Bsp1286I GDGCHC 9 cut(s) 36, 183, 410, 680, 1186, 2011, 3040, 3174, 3813
Bsp13I TCCGGA 2 cut(s) 574, 2236
Bsp1407I TGTACA 1 cut(s) 2592
Bsp19I CCATGG 3 cut(s) 159, 234, 333
BspANI GGCC 4 cut(s) 246, 251, 1689, 3423
BspCNI CTCAG 6 cut(s) 730, 904, 1676, 1807, 3634, 3861
BspEI TCCGGA 2 cut(s) 574, 2236
BspFNI CGCG 3 cut(s) 387, 442, 800
BspHI TCATGA 1 cut(s) 2134
BspMAI CTGCAG 1 cut(s) 3640
BspMI ACCTGC 1 cut(s) 3887
BspPI GGATC 7 cut(s) 1445, 2067, 2228, 2525, 2538, 2789, 2795
BspT107I GGYRCC 4 cut(s) 422, 898, 1720, 2977
BspTI CTTAAG 1 cut(s) 692
BspTNI GGTCTC 1 cut(s) 711
BsrBI CCGCTC 2 cut(s) 369, 568
BsrDI GCAATG 5 cut(s) 870, 1173, 1714, 3288, 3777
BsrGI TGTACA 1 cut(s) 2592
BsrI ACTGG 4 cut(s) 355, 673, 1663, 3259
BssNI GRCGYC 5 cut(s) 126, 423, 758, 899, 2978
BssSI CACGAG 2 cut(s) 1185, 3069
BssT1I CCWWGG 7 cut(s) 159, 234, 333, 917, 1724, 2319, 2777
Bst2BI CACGAG 2 cut(s) 1185, 3069
Bst2UI CCWGG 4 cut(s) 618, 682, 1514, 1869
Bst4CI ACNGT 6 cut(s) 604, 1249, 1639, 2509, 3649, 3670
Bst6I CTCTTC 6 cut(s) 329, 483, 2010, 2957, 2988, 3960
BstACI GRCGYC 5 cut(s) 126, 423, 758, 899, 2978
BstAFI CTTAAG 1 cut(s) 692
BstAPI GCANNNNNTGC 2 cut(s) 1907, 3178
BstAUI TGTACA 1 cut(s) 2592
BstC8I GCNNGC 8 cut(s) 183, 371, 401, 2219, 2940, 3233, 3295, 3706
BstDSI CCRYGG 4 cut(s) 159, 234, 333, 603
BstEII GGTNACC 1 cut(s) 1375
BstENI CCTNNNNNAGG 1 cut(s) 1694
BstF5I GGATG 9 cut(s) 627, 1168, 1291, 1311, 1342, 3280, 3314, 3426, 3522
BstFNI CGCG 3 cut(s) 387, 442, 800
BstH2I RGCGCY 4 cut(s) 426, 902, 2981, 3855
BstHHI GCGC 7 cut(s) 389, 425, 442, 901, 2980, 3721, 3854
BstMAI GTCTC 4 cut(s) 711, 1824, 3638, 3706
BstMCI CGRYCG 1 cut(s) 933
BstNI CCWGG 4 cut(s) 618, 682, 1514, 1869
BstNSI RCATGY 3 cut(s) 2170, 3235, 3604
BstPAI GACNNNNGTC 1 cut(s) 2432
BstPI GGTNACC 1 cut(s) 1375
BstSCI CCNGG 8 cut(s) 246, 394, 403, 616, 680, 1512, 1867, 3685
BstSFI CTRYAG 4 cut(s) 1635, 1845, 3636, 3648
BstSLI GKGCMC 2 cut(s) 2011, 3040
BstUI CGCG 3 cut(s) 387, 442, 800
BstV2I GAAGAC 2 cut(s) 45, 3946
BstX2I RGATCY 2 cut(s) 2233, 2530
BstXI CCANNNNNNTGG 2 cut(s) 1387, 1875
BstYI RGATCY 2 cut(s) 2233, 2530
BsuI GTATCC 1 cut(s) 2984
BsuRI GGCC 4 cut(s) 246, 251, 1689, 3423
BtgI CCRYGG 4 cut(s) 159, 234, 333, 603
BtgZI GCGATG 1 cut(s) 1168
BtsCI GGATG 9 cut(s) 627, 1168, 1291, 1311, 1342, 3280, 3314, 3426, 3522
BtsIMutI CAGTG 2 cut(s) 1500, 3813
BveI ACCTGC 1 cut(s) 3887
Cac8I GCNNGC 8 cut(s) 183, 371, 401, 2219, 2940, 3233, 3295, 3706
CaiI CAGNNNCTG 1 cut(s) 3224
CciI TCATGA 1 cut(s) 2134
CfoI GCGC 7 cut(s) 389, 425, 442, 901, 2980, 3721, 3854
Cfr13I GGNCC 6 cut(s) 163, 245, 250, 414, 889, 3421
CseI GACGC 2 cut(s) 134, 766
CsiI ACCWGGT 1 cut(s) 1867
Csp6I GTAC 7 cut(s) 883, 1667, 2270, 2593, 3201, 3610, 3863
CviQI GTAC 7 cut(s) 883, 1667, 2270, 2593, 3201, 3610, 3863
DinI GGCGCC 3 cut(s) 424, 900, 2979
DrdI GACNNNNNNGTC 1 cut(s) 1816
DseDI GACNNNNNNGTC 1 cut(s) 1816
Eam1104I CTCTTC 6 cut(s) 329, 483, 2010, 2957, 2988, 3960
EarI CTCTTC 6 cut(s) 329, 483, 2010, 2957, 2988, 3960
EciI GGCGGA 4 cut(s) 35, 206, 217, 623
Ecl136II GAGCTC 2 cut(s) 34, 181
Eco130I CCWWGG 7 cut(s) 159, 234, 333, 917, 1724, 2319, 2777
Eco147I AGGCCT 1 cut(s) 1689
Eco24I GRGCYC 3 cut(s) 36, 183, 410
Eco31I GGTCTC 1 cut(s) 711
Eco47I GGWCC 3 cut(s) 163, 414, 889
Eco47III AGCGCT 1 cut(s) 3853
Eco53kI GAGCTC 2 cut(s) 34, 181
Eco91I GGTNACC 1 cut(s) 1375
EcoICRI GAGCTC 2 cut(s) 34, 181
EcoNI CCTNNNNNAGG 1 cut(s) 1694
EcoO109I RGGNCCY 1 cut(s) 3421
EcoO65I GGTNACC 1 cut(s) 1375
EcoRI GAATTC 3 cut(s) 1093, 2151, 2524
EcoRII CCWGG 4 cut(s) 616, 680, 1512, 1867
EcoT14I CCWWGG 7 cut(s) 159, 234, 333, 917, 1724, 2319, 2777
EcoT22I ATGCAT 2 cut(s) 2172, 3135
EcoT38I GRGCYC 3 cut(s) 36, 183, 410
EgeI GGCGCC 3 cut(s) 424, 900, 2979
EheI GGCGCC 3 cut(s) 424, 900, 2979
ErhI CCWWGG 7 cut(s) 159, 234, 333, 917, 1724, 2319, 2777
FalI AAGNNNNNCTT 2 cut(s) 3748, 3780
FaqI GGGAC 3 cut(s) 178, 1974, 3060
FauI CCCGC 1 cut(s) 70
FbaI TGATCA 1 cut(s) 1422
FblI GTMKAC 3 cut(s) 2436, 3632, 3832
FokI GGATG 9 cut(s) 634, 1175, 1298, 1318, 1349, 3287, 3301, 3413, 3509
FriOI GRGCYC 3 cut(s) 36, 183, 410
FspBI CTAG 8 cut(s) 837, 918, 1023, 1578, 1622, 3123, 3242, 3973
GlaI GCGC 7 cut(s) 388, 424, 441, 900, 2979, 3720, 3853
GsaI CCCAGC 2 cut(s) 1176, 2058
GsuI CTGGAG 6 cut(s) 338, 664, 728, 3150, 3363, 3563
HaeII RGCGCY 4 cut(s) 426, 902, 2981, 3855
HaeIII GGCC 4 cut(s) 246, 251, 1689, 3423
HgaI GACGC 2 cut(s) 134, 766
HhaI GCGC 7 cut(s) 389, 425, 442, 901, 2980, 3721, 3854
Hin1I GRCGYC 5 cut(s) 126, 423, 758, 899, 2978
Hin6I GCGC 7 cut(s) 387, 423, 440, 899, 2978, 3719, 3852
HinP1I GCGC 7 cut(s) 387, 423, 440, 899, 2978, 3719, 3852
HincII GTYRAC 2 cut(s) 1045, 2610
HindII GTYRAC 2 cut(s) 1045, 2610
HindIII AAGCTT 1 cut(s) 2289
HphI GGTGA 9 cut(s) 196, 250, 556, 865, 880, 1012, 1241, 1286, 1741
Hpy99I CGWCG 4 cut(s) 128, 140, 179, 3755
HpyCH4III ACNGT 6 cut(s) 604, 1249, 1639, 2509, 3649, 3670
HpyCH4IV ACGT 2 cut(s) 3185, 3753
HpySE526I ACGT 2 cut(s) 3185, 3753
Hsp92I GRCGYC 5 cut(s) 126, 423, 758, 899, 2978
HspAI GCGC 7 cut(s) 387, 423, 440, 899, 2978, 3719, 3852
KasI GGCGCC 3 cut(s) 422, 898, 2977
Kpn2I TCCGGA 2 cut(s) 574, 2236
Ksp22I TGATCA 1 cut(s) 1422
LmnI GCTCC 9 cut(s) 565, 683, 709, 973, 1239, 3169, 3377, 3503, 3582
LweI GCATC 7 cut(s) 1153, 2239, 2496, 3230, 3265, 3328, 3528
MabI ACCWGGT 1 cut(s) 1867
MaeI CTAG 8 cut(s) 837, 918, 1023, 1578, 1622, 3123, 3242, 3973
MaeII ACGT 2 cut(s) 3185, 3753
MaeIII GTNAC 7 cut(s) 25, 1063, 1203, 1375, 2425, 2768, 2904
MbiI CCGCTC 2 cut(s) 369, 568
MfeI CAATTG 1 cut(s) 2442
MflI RGATCY 2 cut(s) 2233, 2530
MhlI GDGCHC 9 cut(s) 36, 183, 410, 680, 1186, 2011, 3040, 3174, 3813
Mly113I GGCGCC 3 cut(s) 423, 899, 2978
MlyI GAGTC 9 cut(s) 233, 944, 1003, 1583, 1826, 1996, 2333, 2605, 2927
MmeI TCCRAC 3 cut(s) 198, 1106, 1283
Mph1103I ATGCAT 2 cut(s) 2172, 3135
MroI TCCGGA 2 cut(s) 574, 2236
MseI TTAA 8 cut(s) 657, 693, 1559, 2163, 2184, 2259, 3857, 3917
MslI CAYNNNNRTG 6 cut(s) 332, 1779, 2002, 2399, 3054, 3138
MspA1I CMGCKG 4 cut(s) 1210, 1349, 3383, 3641
MspCI CTTAAG 1 cut(s) 692
MspR9I CCNGG 8 cut(s) 248, 396, 405, 618, 682, 1514, 1869, 3687
MunI CAATTG 1 cut(s) 2442
Mva1269I GAATGC 7 cut(s) 1464, 1581, 2170, 2201, 2742, 3135, 3515
MvaI CCWGG 4 cut(s) 618, 682, 1514, 1869
MvnI CGCG 3 cut(s) 387, 442, 800
NarI GGCGCC 3 cut(s) 423, 899, 2978
NciI CCSGG 4 cut(s) 248, 396, 405, 3687
NcoI CCATGG 3 cut(s) 159, 234, 333
NmeAIII GCCGAG 1 cut(s) 415
NmuCI GTSAC 4 cut(s) 25, 1203, 2425, 2904
NsiI ATGCAT 2 cut(s) 2172, 3135
NspI RCATGY 3 cut(s) 2170, 3235, 3604
OliI CACNNNNGTG 2 cut(s) 2002, 3054
PaeI GCATGC 1 cut(s) 3235
PagI TCATGA 1 cut(s) 2134
PceI AGGCCT 1 cut(s) 1689
PcsI WCGNNNNNNNCGW 1 cut(s) 132
PctI GAATGC 7 cut(s) 1464, 1581, 2170, 2201, 2742, 3135, 3515
PflFI GACNNNGTC 1 cut(s) 3628
PfoI TCCNGGA 1 cut(s) 1512
PleI GAGTC 9 cut(s) 233, 943, 1003, 1582, 1825, 1995, 2332, 2605, 2926
PluTI GGCGCC 3 cut(s) 426, 902, 2981
PpsI GAGTC 9 cut(s) 233, 943, 1003, 1582, 1825, 1995, 2332, 2605, 2926
PshAI GACNNNNGTC 1 cut(s) 2432
PsiI TTATAA 1 cut(s) 1805
Psp124BI GAGCTC 2 cut(s) 36, 183
Psp1406I AACGTT 1 cut(s) 3185
Psp6I CCWGG 4 cut(s) 616, 680, 1512, 1867
PspEI GGTNACC 1 cut(s) 1375
PspFI CCCAGC 2 cut(s) 1172, 2054
PspGI CCWGG 4 cut(s) 616, 680, 1512, 1867
PspPI GGNCC 6 cut(s) 163, 245, 250, 414, 889, 3421
PsrI GAACNNNNNNTAC 2 cut(s) 1602, 1634
PstI CTGCAG 1 cut(s) 3640
PstNI CAGNNNCTG 1 cut(s) 3224
PsuI RGATCY 2 cut(s) 2233, 2530
PsyI GACNNNGTC 1 cut(s) 3628
PvuII CAGCTG 4 cut(s) 1210, 1349, 3383, 3641
RsaI GTAC 7 cut(s) 884, 1668, 2271, 2594, 3202, 3611, 3864
RsaNI GTAC 7 cut(s) 883, 1667, 2270, 2593, 3201, 3610, 3863
RseI CAYNNNNRTG 6 cut(s) 332, 1779, 2002, 2399, 3054, 3138
SacI GAGCTC 2 cut(s) 36, 183
SaqAI TTAA 8 cut(s) 657, 693, 1559, 2163, 2184, 2259, 3857, 3917
Sau96I GGNCC 6 cut(s) 163, 245, 250, 414, 889, 3421
ScaI AGTACT 1 cut(s) 1668
SchI GAGTC 9 cut(s) 233, 944, 1003, 1583, 1826, 1996, 2333, 2605, 2927
ScrFI CCNGG 8 cut(s) 248, 396, 405, 618, 682, 1514, 1869, 3687
SduI GDGCHC 9 cut(s) 36, 183, 410, 680, 1186, 2011, 3040, 3174, 3813
SexAI ACCWGGT 1 cut(s) 1867
SfaNI GCATC 7 cut(s) 1153, 2239, 2496, 3230, 3265, 3328, 3528
SfcI CTRYAG 4 cut(s) 1635, 1845, 3636, 3648
SfoI GGCGCC 3 cut(s) 424, 900, 2979
SinI GGWCC 3 cut(s) 163, 414, 889
SmiMI CAYNNNNRTG 6 cut(s) 332, 1779, 2002, 2399, 3054, 3138
SmlI CTYRAG 8 cut(s) 527, 692, 1011, 2842, 3405, 3527, 3812, 3872
SmoI CTYRAG 8 cut(s) 527, 692, 1011, 2842, 3405, 3527, 3812, 3872
SphI GCATGC 1 cut(s) 3235
SseBI AGGCCT 1 cut(s) 1689
SspDI GGCGCC 3 cut(s) 422, 898, 2977
SspI AATATT 4 cut(s) 730, 2299, 2962, 3015
SspMI CTAG 8 cut(s) 837, 918, 1023, 1578, 1622, 3123, 3242, 3973
SstI GAGCTC 2 cut(s) 36, 183
StuI AGGCCT 1 cut(s) 1689
StyD4I CCNGG 8 cut(s) 246, 394, 403, 616, 680, 1512, 1867, 3685
StyI CCWWGG 7 cut(s) 159, 234, 333, 917, 1724, 2319, 2777
TaaI ACNGT 6 cut(s) 604, 1249, 1639, 2509, 3649, 3670
TaiI ACGT 2 cut(s) 3188, 3756
TatI WGTACW 2 cut(s) 1666, 2592
Tru1I TTAA 8 cut(s) 657, 693, 1559, 2163, 2184, 2259, 3857, 3917
Tru9I TTAA 8 cut(s) 657, 693, 1559, 2163, 2184, 2259, 3857, 3917
TscAI CASTG 2 cut(s) 1500, 3813
TseFI GTSAC 4 cut(s) 25, 1203, 2425, 2904
Tsp45I GTSAC 4 cut(s) 25, 1203, 2425, 2904
TspGWI ACGGA 3 cut(s) 1925, 2786, 3218
TspRI CASTG 2 cut(s) 1500, 3813
Tth111I GACNNNGTC 1 cut(s) 3628
Vha464I CTTAAG 1 cut(s) 692
VneI GTGCAC 1 cut(s) 2007
VpaK11BI GGWCC 3 cut(s) 163, 414, 889
XagI CCTNNNNNAGG 1 cut(s) 1694
XapI RAATTY 8 cut(s) 871, 1093, 1198, 1737, 2151, 2158, 2524, 3949
XbaI TCTAGA 3 cut(s) 1621, 3122, 3241
XceI RCATGY 3 cut(s) 2170, 3235, 3604
XcmI CCANNNNNNNNNTGG 1 cut(s) 1872
XmaJI CCTAGG 1 cut(s) 917
XmiI GTMKAC 3 cut(s) 2436, 3632, 3832
XspI CTAG 8 cut(s) 837, 918, 1023, 1578, 1622, 3123, 3242, 3973
ZrmI AGTACT 1 cut(s) 1668
Zsp2I ATGCAT 2 cut(s) 2172, 3135
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.