Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0006249

Physical Location & Seq

Genomic Coordinates Forward (+)

9120777 .. 9127938

Gene Structure 7162 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G16130.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3120 bp

ATGAGTGAAAGAGCAAAATTGCAAAAAAAAAAAAAAGTCACTGAAGATTTATTAGACTCTCTTCTTCTTCTTCCTCCTTGGCGCAATTTCGCAATTTCGCAATCGCATCAGTCAATTATCGAATCGTCCTCCCAGAGATTACCGGAGAAAATGAGGATTGATGAGAACGAAGGTGTCTCTGCTTCAAGCAAGCACCTAGTCTTCGCTTACTACGTCACTGGACATGGTTTCGGTCACGCCACTCGAGTCGTCGAGGTTGTCCGTCACCTGATCGCGGCGGGGCATGATGTTCATGTTGTCACCGGCGCGCCTGATTTTGTCTTCACATCTGAAATTCAGTCTCCGAGGCTCAAAATTCGAAAGGTTCTTTTGGATTGTGGGGCTGTACAAGCTGATGCATTGACCGTTGATCGTCTTGCCTCGTTAGAAAAGTATGTGGAAACAGCTGTGGTTCCTCGAGCTGAAATATTGGAAACTGAAGTGGAGTGGCTTCATTCTATCAAAGCTGATTTTGTGGTGTCTGATGTTGTCCCTGTCGCATGCCGTGCTGCGGCTGATGCTGGGATACGTTCTGTTTGTGTCACCAATTTCAGCTGGGATTTTATCTATGCTGAGTACGTGATGGCTGCTGGATATCACCATCGCTCCATCGTTTGGCAGATAGCTGAAGATTATTCTCATTGCGAGTTCCTAATTCGCCTCCCAGGATATTGTCCAATGCCTGCTTTTCGTGATGTCATCGATGTACCGTTAGTTGTGAGGAGACTTCACAAATCTCGCAAGGAGGTGAGGAAAGAACTCGGCATTGCTGAAGATGTGAATGTTGTTATACTCAATTTTGGTGGACAGCCCTCAGGGTGGAACTTGAAGGAAACATCACTACCGACTGGGTGGCTGTGTCTGGTTTGTGGCGCATCTGAGACCCTGGAGCTTCCACCAAATTTTATAAAGCTTGCTAAGGATGCTTATACGCCTGATATTATAGCGGCATCTGACTGTATGCTTGGGAAAATTGGTTATGGCACTGTCAGTGAAGCCCTATCCTACAAGGTGCCGTTTGTCTTTGTACGCAGAGATTATTTCAATGAGGAACCTTTTCTGAGAAATATGCTTGAGTTTTATCAATGTGGTGTTGAGATGATCAGGAGAGACCTATTAATGGGCCAATGGACGCCATATCTTGAACGTGCAGTTAGCTTGAAACCTTGCTATGAGGGTGGCATCAATGGTGGTGAGATTGCAGCTCACATCTTACAGGAGACAGCCATTGGAAGACACTGCGCATCTGATAAGTTAAGTGGTGCAAGAAGATTACGTGATGCAATTATCCTGGGGTATCAGCTACAGAGAGTCCCTGGAAGAGACATTGCTATTCCGGAGTGGTATTCAAGGGCTGAAAATGAACTAGGTCAATCTGCTGGATCATCACCTACTGTTCAAGCGAATGAGAACAACTCATTGGTGGAGTCGTGCATCGATGATTTTGATATCCTTCAAGGTGATGTTCAAGGTCTTTCAGATACGTGTACATTTCTTAAGAGTTTAGCTATGCTAGATGCTATTCATGATTCTGAAAAGAGTACGGAGAAGAAGACCGTGCGTGAAAGAAAAGCTGCTGGTGGTCTCTTCAATTGGGAGGAAGAAATCTTTGTTGCCAGAGCACCTGGAAGGTTAGATGTGATGGGTGGAATTGCTGACTATTCAGGAAGCCTTGTCTTGCAGATGCCAATAAGGGAAGCTTGCCATGTAGCTGTTCAAAGAAACCTTCCTGGAAAACATAGACTGTGGAAACATGCCCAAGCCCGACAGCAAGCTAAGGGACAAGTACCAACACCAGTTCTGCAAATTGTCTCATATGGATCAGAGATCAGCAATCGTGCCCCCACTTTTGACATGGATTTGTCTGATTTTATGGATGGAGATGAACCAATTTCTTATGAAAAAGCAAGAAAGTTCTTTGCTCAGGATCCAGCACAAAAGTGGGCAGCATATGTTGCTGGGACAATCTTGGTATTGATGATAGAACTTGGTGTGCGTTTTGAGGATAGCATCAGCTTGCTGGTTTCTTCTGCTGTACCTGAAGGTAAAGGTGTATCTTCATCTGCTGCTGTGGAGGTGGCGAGCATGTCCGCAATAGCTGCTGCACATGGACTGAGTATCGACCCCAGAGATCTTGCTATACTCTGCCAAAAGGTGGAGAATCACATTGTTGGAGCTCCATGTGGTGTTATGGATCAGATGACTTCTTCCTGTGGGGAAGCCAATAAACTGTTGGCCATGATCTGCCAACCTGCAGAAGTAGTTGGGCTTGTTGAGATTCCCAACCATGTCAGATTTTGGGGAATTGATTCCGGAATTCGACACAGCGTTGGAGGTGCAGACTATAGGTCGGTCAGAGTTGGCGCTTACATGGGGAGAAAGATGATCAAGTCAATGGCGTCTTCTATTCTGTCACCATCAGCGTCAAGTGCTAATGGAGGCAACCCGGAAGAACTAGAGGATGAAGGGATTGACCTACTTGAGGCCGAAGCTTCATTAGATTACTTGTGCAATTTGTCGCCTCACAGATATGAAGCCCGTTATGCAGATAAGCTTCCAGATATCATGTTGGGTCAGACATTCATTGAGGAATATGCGGATCATGACGATCCGGTCACAGTGATTGATCAAAAGCGTTCTTACAGTGTAAAAGCTCCTGCCAGACACCCTATTTACGAAAACTTCCGGGTCAAGACATTTAAAGCTCTATTGACTTCTGCAACATCAGATGAGCAACTTACTGCTCTTGGAGGACTTCTTTATCAGTGTCACTATAGTTACAGCGCATGCGGACTAGGATCGGATGGAACCAACCGGCTGGTGCAGTTAGTACAAGGGATGCAGCATAACAAGTCTAATTCTGAGGATGGAACATTGTATGGAGCCAAAATCACAGGCGGTGGATCAGGTGGAACAGTCTGCGTCGTAGGCCGTAACTCATTGCGCAGCAGCCAACAAATTCTCGAGATTCAGCAGAGATACAAAGCTGCGACAGGGTATTTACCGCTGATATTCGAAGGTTCGTCACCTGGAGCTGGCAAGTTTGGTTACCTCCGGATCCGACGTCGTATCTCTCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005911 GO:0005975 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009506 GO:0009702 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019200 GO:0030054 GO:0044237 GO:0044238 GO:0044262 GO:0044424 GO:0044444 GO:0044464 GO:0046835 GO:0055044 GO:0071704

KEGG Pathways

Metabolic & Signaling

ko00520 ko01100 map00520 map01100

Pfam Domains

Protein Families

GHMP_kinases_C GHMP_kinases_N GalKase_gal_bdg Glyco_trans_1_3

Protein Analysis

1039

Amino Acids

114.26

Weight (kDa)

5.89

Isoelectric Point (pI)

45.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
GalKase_gal_bdg	PF10509	546 - 587	4.4e-07	Galactokinase galactose-binding signature
GHMP_kinases_N	PF00288	664 - 752	3.3e-16	GHMP kinases N terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006249)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G42850 AT3G42850 AT4G16130
fragaria_vesca	FvH4_2g36460 FvH4_2g36460 FvH4_2g36460
malus_domestica	MD08G1124400.v1.1 MD15G1103100.v1.1
prunus_persica	Prupe.1G456000_v2.0.a1 Prupe.1G456000_v2.0.a1 Prupe.1G456000_v2.0.a1 Prupe.1G456000_v2.0.a1 Prupe.1G456000_v2.0.a1 Prupe.1G456000_v2.0.a1 Prupe.1G456000_v2.0.a1
pyrus_communis	pycom08g10310 pycom15g09400
rosa_chinensis	RchiOBHm_Chr6g0305421
rosa_laevigata	RLG00000010892
rosa_multiflora	Rmu_sc0002782.1_g000020
rosa_roxburghii	Rroxscaffold_7G00162820
rosa_rugosa	Rorug06G0340200
rosa_samantha	Rh6AG452200 Rh6BG449500 Rh6CG466000 Rh6DG452700
rosa_wichuraiana	Rw6G039400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	947
AasI	GACNNNNNNGTC	1 cut(s)	2651
AatII	GACGTC	1 cut(s)	3106
Acc16I	TGCGCA	2 cut(s)	1282, 2984
Acc36I	ACCTGC	1 cut(s)	2299
AccB1I	GGYRCC	1 cut(s)	1051
AccB7I	CCANNNNNTGG	2 cut(s)	654, 2194
AccII	CGCG	2 cut(s)	275, 308
AccIII	TCCGGA	3 cut(s)	1375, 2351, 3093
AciI	CCGC	9 cut(s)	275, 278, 551, 986, 2130, 2636, 2829, 2937, 3044
AcoI	YGGCCR	1 cut(s)	2274
AcsI	RAATTY	5 cut(s)	333, 354, 940, 2355, 2997
AcuI	CTGAAG	5 cut(s)	63, 498, 687, 831, 2100
AcyI	GRCGYC	3 cut(s)	1172, 2438, 3103
AfaI	GTAC	9 cut(s)	387, 617, 747, 1068, 1528, 1582, 1827, 2076, 2871
AfiI	CCNNNNNNNGG	8 cut(s)	274, 550, 654, 858, 1159, 2194, 2521, 3074
AflII	CTTAAG	1 cut(s)	1535
AflIII	ACRYGT	1 cut(s)	1523
AhdI	GACNNNNNGTC	1 cut(s)	2386
AjnI	CCWGG	7 cut(s)	703, 924, 1329, 1354, 1663, 1768, 3067
AjuI	GAANNNNNNNTTGG	2 cut(s)	1442, 1474
AleI	CACNNNNGTG	1 cut(s)	1978
Alw21I	GWGCWC	2 cut(s)	1663, 2218
Alw26I	GTCTC	9 cut(s)	181, 345, 757, 914, 1143, 1253, 1356, 1628, 1855
Ama87I	CYCGRG	3 cut(s)	243, 456, 3002
Aor13HI	TCCGGA	3 cut(s)	1375, 2351, 3093
AoxI	GGCC	4 cut(s)	1162, 2274, 2523, 2968
ApoI	RAATTY	5 cut(s)	333, 354, 940, 2355, 2997
AscI	GGCGCGCC	1 cut(s)	306
AseI	ATTAAT	1 cut(s)	1157
Asp700I	GAANNNNTTC	2 cut(s)	1095, 2347
AspLEI	GCGC	8 cut(s)	84, 308, 310, 914, 1283, 2405, 2825, 2985
AspS9I	GGNCC	1 cut(s)	1162
AsuC2I	CCSGG	2 cut(s)	2486, 2726
AsuII	TTCGAA	2 cut(s)	358, 3054
AvaI	CYCGRG	3 cut(s)	243, 456, 3002
AxyI	CCTNAGG	1 cut(s)	853
BaeGI	GKGCMC	1 cut(s)	1882
BalI	TGGCCA	1 cut(s)	2276
BamHI	GGATCC	2 cut(s)	1966, 3096
BanI	GGYRCC	1 cut(s)	1051
BanII	GRGCYC	1 cut(s)	2218
BbsI	GAAGAC	5 cut(s)	193, 313, 1279, 1598, 2433
Bbv12I	GWGCWC	2 cut(s)	1663, 2218
BccI	CCATC	8 cut(s)	616, 648, 656, 1675, 1910, 2464, 2837, 2900
BceAI	ACGGC	3 cut(s)	528, 1039, 2955
BciT130I	CCWGG	7 cut(s)	705, 926, 1331, 1356, 1665, 1770, 3069
BciVI	GTATCC	1 cut(s)	558
BclI	TGATCA	3 cut(s)	1140, 2424, 2665
BcnI	CCSGG	2 cut(s)	2486, 2726
BcoDI	GTCTC	9 cut(s)	181, 345, 757, 914, 1143, 1253, 1356, 1628, 1855
BfaI	CTAG	5 cut(s)	197, 1406, 1553, 2495, 2834
BfmI	CTRYAG	4 cut(s)	1343, 2292, 2383, 2812
BfoI	RGCGCY	1 cut(s)	2406
BfrI	CTTAAG	1 cut(s)	1535
BfuAI	ACCTGC	1 cut(s)	2299
BfuI	GTATCC	1 cut(s)	558
BglII	AGATCT	1 cut(s)	2170
Bme1390I	CCNGG	9 cut(s)	705, 926, 1331, 1356, 1665, 1770, 2486, 2726, 3069
BmeRI	GACNNNNNGTC	1 cut(s)	2386
BmeT110I	CYCGRG	3 cut(s)	243, 456, 3002
BmgT120I	GGNCC	1 cut(s)	1162
BmiI	GGNNCC	7 cut(s)	453, 1053, 1092, 1968, 2848, 2923, 3098
BmrFI	CCNGG	9 cut(s)	705, 926, 1331, 1356, 1665, 1770, 2486, 2726, 3069
BmrI	ACTGGG	1 cut(s)	897
BmuI	ACTGGG	1 cut(s)	897
BpiI	GAAGAC	5 cut(s)	193, 313, 1279, 1598, 2433
BplI	GAGNNNNNCTC	2 cut(s)	1439, 1471
BpmI	CTGGAG	2 cut(s)	947, 3090
Bpu10I	CCTNAGC	3 cut(s)	957, 1815, 1962
Bpu14I	TTCGAA	2 cut(s)	358, 3054
BpuEI	CTTGAG	2 cut(s)	1133, 2540
BpuMI	CCSGG	2 cut(s)	2486, 2726
Bsa29I	ATCGAT	2 cut(s)	741, 1476
BsaAI	YACGTR	3 cut(s)	619, 1316, 1524
BsaHI	GRCGYC	3 cut(s)	1172, 2438, 3103
BsaI	GGTCTC	3 cut(s)	914, 1143, 1628
BsaJI	CCNNGG	6 cut(s)	77, 344, 703, 924, 1330, 1354
BsaWI	WCCGGW	5 cut(s)	142, 1375, 2351, 2650, 3093
BsaXI	ACNNNNNCTCC	2 cut(s)	629, 659
Bsc4I	CCNNNNNNNGG	8 cut(s)	274, 550, 654, 858, 1159, 2194, 2521, 3074
Bse118I	RCCGGY	2 cut(s)	302, 2853
Bse1I	ACTGG	3 cut(s)	223, 892, 1835
Bse21I	CCTNAGG	1 cut(s)	853
Bse3DI	GCAATG	4 cut(s)	679, 804, 1365, 2978
BseAI	TCCGGA	3 cut(s)	1375, 2351, 3093
BseBI	CCWGG	7 cut(s)	705, 926, 1331, 1356, 1665, 1770, 3069
BseCI	ATCGAT	2 cut(s)	741, 1476
BseDI	CCNNGG	6 cut(s)	77, 344, 703, 924, 1330, 1354
BseGI	GGATG	6 cut(s)	967, 1921, 2506, 2848, 2883, 2911
BseLI	CCNNNNNNNGG	8 cut(s)	274, 550, 654, 858, 1159, 2194, 2521, 3074
BseMI	GCAATG	4 cut(s)	679, 804, 1365, 2978
BseMII	CTCAG	7 cut(s)	603, 867, 909, 1091, 1976, 2144, 2892
BseNI	ACTGG	3 cut(s)	223, 892, 1835
BsePI	GCGCGC	1 cut(s)	306
BseRI	GAGGAG	1 cut(s)	775
BseSI	GKGCMC	1 cut(s)	1882
BseYI	CCCAGC	3 cut(s)	560, 594, 1997
BsgI	GTGCAG	4 cut(s)	1209, 2127, 2397, 2882
Bsh1236I	CGCG	2 cut(s)	275, 308
BshFI	GGCC	4 cut(s)	1164, 2276, 2525, 2970
BshNI	GGYRCC	1 cut(s)	1051
BshVI	ATCGAT	2 cut(s)	741, 1476
BsiHKAI	GWGCWC	2 cut(s)	1663, 2218
BsiHKCI	CYCGRG	3 cut(s)	243, 456, 3002
BsiSI	CCGG	9 cut(s)	143, 303, 1376, 2352, 2486, 2651, 2725, 2854, 3094
BslFI	GGGAC	4 cut(s)	515, 1337, 1833, 2014
BslI	CCNNNNNNNGG	8 cut(s)	274, 550, 654, 858, 1159, 2194, 2521, 3074
BsmAI	GTCTC	9 cut(s)	181, 345, 757, 914, 1143, 1253, 1356, 1628, 1855
BsmFI	GGGAC	4 cut(s)	515, 1337, 1833, 2014
BsnI	GGCC	4 cut(s)	1164, 2276, 2525, 2970
Bso31I	GGTCTC	3 cut(s)	914, 1143, 1628
BsoBI	CYCGRG	3 cut(s)	243, 456, 3002
Bsp119I	TTCGAA	2 cut(s)	358, 3054
Bsp1286I	GDGCHC	3 cut(s)	1663, 1882, 2218
Bsp13I	TCCGGA	3 cut(s)	1375, 2351, 3093
Bsp1407I	TGTACA	2 cut(s)	385, 1526
BspACI	CCGC	9 cut(s)	275, 278, 551, 986, 2130, 2636, 2829, 2937, 3044
BspANI	GGCC	4 cut(s)	1164, 2276, 2525, 2970
BspCNI	CTCAG	7 cut(s)	604, 866, 910, 1092, 1975, 2145, 2893
BspDI	ATCGAT	2 cut(s)	741, 1476
BspEI	TCCGGA	3 cut(s)	1375, 2351, 3093
BspFNI	CGCG	2 cut(s)	275, 308
BspHI	TCATGA	2 cut(s)	1564, 2641
BspLI	GGNNCC	7 cut(s)	453, 1053, 1092, 1968, 2848, 2923, 3098
BspMAI	CTGCAG	1 cut(s)	2296
BspMI	ACCTGC	1 cut(s)	2299
BspT104I	TTCGAA	2 cut(s)	358, 3054
BspT107I	GGYRCC	1 cut(s)	1051
BspTI	CTTAAG	1 cut(s)	1535
BspTNI	GGTCTC	3 cut(s)	914, 1143, 1628
BsrDI	GCAATG	4 cut(s)	679, 804, 1365, 2978
BsrFI	RCCGGY	2 cut(s)	302, 2853
BsrGI	TGTACA	2 cut(s)	385, 1526
BsrI	ACTGG	3 cut(s)	223, 892, 1835
BssAI	RCCGGY	2 cut(s)	302, 2853
BssECI	CCNNGG	6 cut(s)	77, 344, 703, 924, 1330, 1354
BssHII	GCGCGC	1 cut(s)	306
BssNI	GRCGYC	3 cut(s)	1172, 2438, 3103
BssT1I	CCWWGG	1 cut(s)	77
Bst2UI	CCWGG	7 cut(s)	705, 926, 1331, 1356, 1665, 1770, 3069
Bst6I	CTCTTC	3 cut(s)	66, 1354, 1631
BstACI	GRCGYC	3 cut(s)	1172, 2438, 3103
BstAFI	CTTAAG	1 cut(s)	1535
BstAPI	GCANNNNNTGC	3 cut(s)	545, 1994, 2138
BstAUI	TGTACA	2 cut(s)	385, 1526
BstBAI	YACGTR	3 cut(s)	619, 1316, 1524
BstBI	TTCGAA	2 cut(s)	358, 3054
BstDEI	CTNAG	9 cut(s)	612, 853, 918, 957, 1100, 1815, 1962, 2153, 2901
BstEII	GGTNACC	1 cut(s)	3086
BstENI	CCTNNNNNAGG	1 cut(s)	2519
BstF5I	GGATG	6 cut(s)	967, 1921, 2506, 2848, 2883, 2911
BstFNI	CGCG	2 cut(s)	275, 308
BstH2I	RGCGCY	1 cut(s)	2406
BstHHI	GCGC	8 cut(s)	84, 308, 310, 914, 1283, 2405, 2825, 2985
BstMAI	GTCTC	9 cut(s)	181, 345, 757, 914, 1143, 1253, 1356, 1628, 1855
BstMWI	GCNNNNNNNGC	9 cut(s)	389, 545, 557, 962, 1994, 2138, 2468, 2582, 2967
BstNI	CCWGG	7 cut(s)	705, 926, 1331, 1356, 1665, 1770, 3069
BstNSI	RCATGY	4 cut(s)	543, 1796, 2128, 2829
BstPI	GGTNACC	1 cut(s)	3086
BstSCI	CCNGG	9 cut(s)	703, 924, 1329, 1354, 1663, 1768, 2484, 2724, 3067
BstSFI	CTRYAG	4 cut(s)	1343, 2292, 2383, 2812
BstSLI	GKGCMC	1 cut(s)	1882
BstUI	CGCG	2 cut(s)	275, 308
BstV2I	GAAGAC	5 cut(s)	193, 313, 1279, 1598, 2433
BstX2I	RGATCY	3 cut(s)	1966, 2170, 3096
BstXI	CCANNNNNNTGG	1 cut(s)	2857
BstYI	RGATCY	3 cut(s)	1966, 2170, 3096
Bsu15I	ATCGAT	2 cut(s)	741, 1476
Bsu36I	CCTNAGG	1 cut(s)	853
BsuI	GTATCC	1 cut(s)	558
BsuRI	GGCC	4 cut(s)	1164, 2276, 2525, 2970
BsuTUI	ATCGAT	2 cut(s)	741, 1476
BtgZI	GCGATG	1 cut(s)	626
BtsCI	GGATG	6 cut(s)	967, 1921, 2506, 2848, 2883, 2911
BtsI	GCAGTG	1 cut(s)	1276
BtsIMutI	CAGTG	8 cut(s)	39, 216, 1023, 1036, 1276, 2664, 2689, 2810
BveI	ACCTGC	1 cut(s)	2299
CciI	TCATGA	2 cut(s)	1564, 2641
CfoI	GCGC	8 cut(s)	84, 308, 310, 914, 1283, 2405, 2825, 2985
Cfr10I	RCCGGY	2 cut(s)	302, 2853
Cfr13I	GGNCC	1 cut(s)	1162
ClaI	ATCGAT	2 cut(s)	741, 1476
CseI	GACGC	4 cut(s)	1180, 2427, 2451, 2950
Csp6I	GTAC	9 cut(s)	386, 616, 746, 1067, 1527, 1581, 1826, 2075, 2870
CspCI	CAANNNNNGTGG	2 cut(s)	823, 858
CviQI	GTAC	9 cut(s)	386, 616, 746, 1067, 1527, 1581, 1826, 2075, 2870
DdeI	CTNAG	9 cut(s)	612, 853, 918, 957, 1100, 1815, 1962, 2153, 2901
DraI	TTTAAA	1 cut(s)	2740
DrdI	GACNNNNNNGTC	1 cut(s)	2651
DriI	GACNNNNNGTC	1 cut(s)	2386
DseDI	GACNNNNNNGTC	1 cut(s)	2651
EaeI	YGGCCR	1 cut(s)	2274
Eam1104I	CTCTTC	3 cut(s)	66, 1354, 1631
Eam1105I	GACNNNNNGTC	1 cut(s)	2386
EarI	CTCTTC	3 cut(s)	66, 1354, 1631
Ecl136II	GAGCTC	1 cut(s)	2216
Eco130I	CCWWGG	1 cut(s)	77
Eco24I	GRGCYC	1 cut(s)	2218
Eco31I	GGTCTC	3 cut(s)	914, 1143, 1628
Eco32I	GATATC	3 cut(s)	635, 1489, 2602
Eco53kI	GAGCTC	1 cut(s)	2216
Eco57I	CTGAAG	5 cut(s)	63, 498, 687, 831, 2100
Eco81I	CCTNAGG	1 cut(s)	853
Eco88I	CYCGRG	3 cut(s)	243, 456, 3002
Eco91I	GGTNACC	1 cut(s)	3086
EcoICRI	GAGCTC	1 cut(s)	2216
EcoNI	CCTNNNNNAGG	1 cut(s)	2519
EcoO65I	GGTNACC	1 cut(s)	3086
EcoRI	GAATTC	1 cut(s)	2355
EcoRII	CCWGG	7 cut(s)	703, 924, 1329, 1354, 1663, 1768, 3067
EcoRV	GATATC	3 cut(s)	635, 1489, 2602
EcoT14I	CCWWGG	1 cut(s)	77
EcoT22I	ATGCAT	1 cut(s)	400
EcoT38I	GRGCYC	1 cut(s)	2218
ErhI	CCWWGG	1 cut(s)	77
FalI	AAGNNNNNCTT	2 cut(s)	1723, 1755
FaqI	GGGAC	4 cut(s)	515, 1337, 1833, 2014
FauI	CCCGC	1 cut(s)	271
FauNDI	CATATG	2 cut(s)	1855, 1990
FbaI	TGATCA	3 cut(s)	1140, 2424, 2665
FokI	GGATG	6 cut(s)	974, 1928, 2513, 2855, 2890, 2918
FriOI	GRGCYC	1 cut(s)	2218
FspBI	CTAG	5 cut(s)	197, 1406, 1553, 2495, 2834
FspI	TGCGCA	2 cut(s)	1282, 2984
GlaI	GCGC	8 cut(s)	83, 307, 309, 913, 1282, 2404, 2824, 2984
GsaI	CCCAGC	3 cut(s)	564, 598, 2001
GsuI	CTGGAG	2 cut(s)	947, 3090
HaeII	RGCGCY	1 cut(s)	2406
HaeIII	GGCC	4 cut(s)	1164, 2276, 2525, 2970
HapII	CCGG	9 cut(s)	143, 303, 1376, 2352, 2486, 2651, 2725, 2854, 3094
HgaI	GACGC	4 cut(s)	1180, 2427, 2451, 2950
HhaI	GCGC	8 cut(s)	84, 308, 310, 914, 1283, 2405, 2825, 2985
Hin1I	GRCGYC	3 cut(s)	1172, 2438, 3103
Hin6I	GCGC	8 cut(s)	82, 306, 308, 912, 1281, 2403, 2823, 2983
HinP1I	GCGC	8 cut(s)	82, 306, 308, 912, 1281, 2403, 2823, 2983
HindIII	AAGCTT	4 cut(s)	950, 1737, 2529, 2591
HpaII	CCGG	9 cut(s)	143, 303, 1376, 2352, 2486, 2651, 2725, 2854, 3094
Hpy166II	GTNNAC	2 cut(s)	845, 1527
Hpy8I	GTNNAC	2 cut(s)	845, 1527
Hpy99I	CGWCG	4 cut(s)	254, 2966, 3105, 3108
HpyAV	CCTTC	8 cut(s)	164, 862, 1502, 1662, 1775, 2075, 2498, 3050
HpyCH4IV	ACGT	7 cut(s)	213, 568, 618, 1186, 1315, 1523, 3103
HpyF10VI	GCNNNNNNNGC	9 cut(s)	389, 545, 557, 962, 1994, 2138, 2468, 2582, 2967
HpyF3I	CTNAG	9 cut(s)	612, 853, 918, 957, 1100, 1815, 1962, 2153, 2901
HpySE526I	ACGT	7 cut(s)	213, 568, 618, 1186, 1315, 1523, 3103
Hsp92I	GRCGYC	3 cut(s)	1172, 2438, 3103
HspAI	GCGC	8 cut(s)	82, 306, 308, 912, 1281, 2403, 2823, 2983
Kpn2I	TCCGGA	3 cut(s)	1375, 2351, 3093
Ksp22I	TGATCA	3 cut(s)	1140, 2424, 2665
LmnI	GCTCC	7 cut(s)	650, 928, 2213, 2221, 2698, 2921, 3071
MaeI	CTAG	5 cut(s)	197, 1406, 1553, 2495, 2834
MaeII	ACGT	7 cut(s)	213, 568, 618, 1186, 1315, 1523, 3103
MfeI	CAATTG	1 cut(s)	1630
MflI	RGATCY	3 cut(s)	1966, 2170, 3096
MhlI	GDGCHC	3 cut(s)	1663, 1882, 2218
MlsI	TGGCCA	1 cut(s)	2276
MluNI	TGGCCA	1 cut(s)	2276
MlyI	GAGTC	4 cut(s)	50, 255, 1359, 1475
MmeI	TCCRAC	2 cut(s)	2191, 2350
Mox20I	TGGCCA	1 cut(s)	2276
Mph1103I	ATGCAT	1 cut(s)	400
MroI	TCCGGA	3 cut(s)	1375, 2351, 3093
MroXI	GAANNNNTTC	2 cut(s)	1095, 2347
MscI	TGGCCA	1 cut(s)	2276
MseI	TTAA	4 cut(s)	1157, 1295, 1536, 2739
MslI	CAYNNNNRTG	2 cut(s)	1978, 2568
Msp20I	TGGCCA	1 cut(s)	2276
MspA1I	CMGCKG	3 cut(s)	446, 594, 3046
MspCI	CTTAAG	1 cut(s)	1535
MspI	CCGG	9 cut(s)	143, 303, 1376, 2352, 2486, 2651, 2725, 2854, 3094
MspR9I	CCNGG	9 cut(s)	705, 926, 1331, 1356, 1665, 1770, 2486, 2726, 3069
MunI	CAATTG	1 cut(s)	1630
MvaI	CCWGG	7 cut(s)	705, 926, 1331, 1356, 1665, 1770, 3069
MvnI	CGCG	2 cut(s)	275, 308
MwoI	GCNNNNNNNGC	9 cut(s)	389, 545, 557, 962, 1994, 2138, 2468, 2582, 2967
NciI	CCSGG	2 cut(s)	2486, 2726
NdeI	CATATG	2 cut(s)	1855, 1990
NlaIV	GGNNCC	7 cut(s)	453, 1053, 1092, 1968, 2848, 2923, 3098
NmeAIII	GCCGAG	1 cut(s)	780
NsbI	TGCGCA	2 cut(s)	1282, 2984
NsiI	ATGCAT	1 cut(s)	400
NspI	RCATGY	4 cut(s)	543, 1796, 2128, 2829
NspV	TTCGAA	2 cut(s)	358, 3054
OliI	CACNNNNGTG	1 cut(s)	1978
PaeI	GCATGC	2 cut(s)	543, 2829
PaeR7I	CTCGAG	3 cut(s)	243, 456, 3002
PagI	TCATGA	2 cut(s)	1564, 2641
PalAI	GGCGCGCC	1 cut(s)	306
PauI	GCGCGC	1 cut(s)	306
PcsI	WCGNNNNNNNCGW	1 cut(s)	210
PdmI	GAANNNNTTC	2 cut(s)	1095, 2347
PfeI	GAWTC	6 cut(s)	122, 1568, 2200, 2317, 2348, 3007
PflMI	CCANNNNNTGG	2 cut(s)	654, 2194
PfoI	TCCNGGA	1 cut(s)	1768
PleI	GAGTC	4 cut(s)	50, 254, 1358, 1474
PpsI	GAGTC	4 cut(s)	50, 254, 1358, 1474
Ppu21I	YACGTR	3 cut(s)	619, 1316, 1524
PshBI	ATTAAT	1 cut(s)	1157
PsiI	TTATAA	1 cut(s)	947
Psp124BI	GAGCTC	1 cut(s)	2218
Psp6I	CCWGG	7 cut(s)	703, 924, 1329, 1354, 1663, 1768, 3067
PspEI	GGTNACC	1 cut(s)	3086
PspFI	CCCAGC	3 cut(s)	560, 594, 1997
PspGI	CCWGG	7 cut(s)	703, 924, 1329, 1354, 1663, 1768, 3067
PspN4I	GGNNCC	7 cut(s)	453, 1053, 1092, 1968, 2848, 2923, 3098
PspPI	GGNCC	1 cut(s)	1162
PspXI	VCTCGAGB	2 cut(s)	243, 456
PstI	CTGCAG	1 cut(s)	2296
PsuI	RGATCY	3 cut(s)	1966, 2170, 3096
PteI	GCGCGC	1 cut(s)	306
PvuII	CAGCTG	2 cut(s)	446, 594
RsaI	GTAC	9 cut(s)	387, 617, 747, 1068, 1528, 1582, 1827, 2076, 2871
RsaNI	GTAC	9 cut(s)	386, 616, 746, 1067, 1527, 1581, 1826, 2075, 2870
RseI	CAYNNNNRTG	2 cut(s)	1978, 2568
SacI	GAGCTC	1 cut(s)	2218
SaqAI	TTAA	4 cut(s)	1157, 1295, 1536, 2739
Sau96I	GGNCC	1 cut(s)	1162
SchI	GAGTC	4 cut(s)	50, 255, 1359, 1475
ScrFI	CCNGG	9 cut(s)	705, 926, 1331, 1356, 1665, 1770, 2486, 2726, 3069
SduI	GDGCHC	3 cut(s)	1663, 1882, 2218
SfcI	CTRYAG	4 cut(s)	1343, 2292, 2383, 2812
Sfr274I	CTCGAG	3 cut(s)	243, 456, 3002
SfuI	TTCGAA	2 cut(s)	358, 3054
SgrAI	CRCCGGYG	1 cut(s)	302
SgsI	GGCGCGCC	1 cut(s)	306
SlaI	CTCGAG	3 cut(s)	243, 456, 3002
SmiMI	CAYNNNNRTG	2 cut(s)	1978, 2568
SmlI	CTYRAG	6 cut(s)	243, 456, 1112, 1535, 2519, 3002
SmoI	CTYRAG	6 cut(s)	243, 456, 1112, 1535, 2519, 3002
SphI	GCATGC	2 cut(s)	543, 2829
SsiI	CCGC	9 cut(s)	275, 278, 551, 986, 2130, 2636, 2829, 2937, 3044
SspI	AATATT	1 cut(s)	468
SspMI	CTAG	5 cut(s)	197, 1406, 1553, 2495, 2834
SstI	GAGCTC	1 cut(s)	2218
StyD4I	CCNGG	9 cut(s)	703, 924, 1329, 1354, 1663, 1768, 2484, 2724, 3067
StyI	CCWWGG	1 cut(s)	77
TaiI	ACGT	7 cut(s)	216, 571, 621, 1189, 1318, 1526, 3106
TaqII	GACCGA	2 cut(s)	221, 2380
TatI	WGTACW	3 cut(s)	385, 1526, 2869
TauI	GCSGC	3 cut(s)	278, 554, 989
TfiI	GAWTC	6 cut(s)	122, 1568, 2200, 2317, 2348, 3007
Tru1I	TTAA	4 cut(s)	1157, 1295, 1536, 2739
Tru9I	TTAA	4 cut(s)	1157, 1295, 1536, 2739
TscAI	CASTG	8 cut(s)	46, 223, 1030, 1036, 1283, 2664, 2689, 2810
TspGWI	ACGGA	2 cut(s)	251, 1598
TspRI	CASTG	8 cut(s)	46, 223, 1030, 1036, 1283, 2664, 2689, 2810
Van91I	CCANNNNNTGG	2 cut(s)	654, 2194
Vha464I	CTTAAG	1 cut(s)	1535
VspI	ATTAAT	1 cut(s)	1157
XagI	CCTNNNNNAGG	1 cut(s)	2519
XapI	RAATTY	5 cut(s)	333, 354, 940, 2355, 2997
XceI	RCATGY	4 cut(s)	543, 1796, 2128, 2829
XcmI	CCANNNNNNNNNTGG	3 cut(s)	1891, 1977, 2269
XhoI	CTCGAG	3 cut(s)	243, 456, 3002
XmnI	GAANNNNTTC	2 cut(s)	1095, 2347
XspI	CTAG	5 cut(s)	197, 1406, 1553, 2495, 2834
ZraI	GACGTC	1 cut(s)	3104
Zsp2I	ATGCAT	1 cut(s)	400

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.