Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002782.1

Orthogroup ID

OG0006249

Physical Location & Seq

Genomic Coordinates Reverse (-)

62382 .. 70857

Gene Structure 8476 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002782.1_g000020.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2973 bp

atgaggattgaggaagaggccgacggagtctccgcgtccaggaaccacctcgtcttcgcttactacgtcaccggccacggcttcggccacgccactcgcgtggtgcgtcacctgattctcgccgggcatgacgtccacgtggtcaccggagctccggactttgttttcacgtcggaggtacagtcgcctcgactcttcattcgcaaggtgctgctggactgtggagcggttcaggcggatgccttaacagtggatcgccttgcatctttggagaagtattcggagacggctgtggtgccaagggagtctatattgaaaactgaagtagagtggctgacctccatcaaagctgacctggtggtctcggatgtcgttccagttgcgtgccgagctgcagctgatgctggaattcgctcagtctgtgtcactaactttagctgggacttcatctatgcagagtatgtcatggcagccggaagtcatcatcgttcaatagtttggcagatagcagaagattattctcactgtgagttcctgatccgcctcccaggatactgcccaatgcctgcattccgtgatgtaattgacgtacctttagttgtgaggaggttgcacagatcccgcaaagaggtgagaaaggaactaggaattgaagaagatgccaaattagtcattctcaactttggtggacagccatcaggctggaagttgaaagaggagtttttaccccctggatggcttggcctggtttgtggtgcttctgacagccaggagcttccaccaaattttaggaagcttgcaaaagatgcttatacacctgatattatagcagcatctgattgtatgctgggaaaaattggatatggcactgtgagtgaagcccttgcattcaagttaccatttgtctttgtacgcagagattatttcaatgaagaaccttttttgagaaatatgcttgagcattatcaatctggcgttgagatgattaggagagatttgctcactggtcattggagaccttaccttgagcgtgcaatcagtttaaaaccttgctatgaaggaggcatcaatggtggtgaggtggcagctcaggtccttcaagaaacagctattgggaaaaactgggcatcagataagcttagtggggcaagaaggttgcgtgatgctatcattcttgggtatcaacttcaaagggtccctggacgagatatggccattcctgaatggtatgcaaatgctgaaactgaacttcgaattggatcaccaacttgtcaaatgagtgagaatgacgagcagagctccctgatgaactcatgcattgaagactttgagattcttcatggagatcttcaaggtctttccgatacaatgacttttttgaagagcttggcggaactagattctgcatatgaatctgaaaaagctactgagaagcggcagataagagagcggaaggctgcagccggactcttcaattgggaggaagaaatttttgtggcaagagcacctggacgattagatgtaatgggtgggattgctgactattcaggaagccttgtcttgcagatgcccataagagaagcttgccatgttgctatacagagacatcaacctagtaaacacaggctctggaagcatgccctggctcggcaggaagccaaaggacaaagctcaacacctgtcttgcaaattgtctcatatggttcagagttgagcaatcgtagtcctacttttgacatggatctatctgattttatggacggagatcatccaatgtcatatgagaaagcaaaaatatatttttcacaagatccgtctcaaaagtgggcagcatatgttgcgggtgtcattctggttttaatgacagaactaggtgtacgctttaaggagagcattagtttgctggtatcctctttagttccggaaggcaaaggtgtctcttcttctgcttcggtggaggttgctacaatgtctgctatagctgctgcccatggattaagcatcagtcccagagatcttgctttgctttgccagaaggtggagaatcatattgttggagctccgtgtggtgtgatggaccaaatgacttctgcatgtggtgaagccaacaagcttcttgcaatggtgtgccagcctgctgaggtacttgggcttgtagaaattcctggccacgtccgattttggggaattgattcaggcataagacacagtgttggtggtgcggattatggatctgttagagtaggtgcctttatgggtcggacgatcataaagtctacagcttctacgattatgtctcaatcattgtcaaatggaaatgggatgaatcttgacgagttagaggatgatggttttgaactgcctaaagctgaagcttcattagattatttgtgcaacctgtcacctcatagatacgatgctctttatgttaatatacttcccgagtccatacttggtgacgcttttctggagaagtatgctgatcatggtgacccagttacagttattgatccaaagcgtatgtatggagtgagagcacctactagacatcctatatatgaaaatttccgagttaaggcattcaaagcacttctaacatctgcaaattcagatgatcagcttacggctcttggagagttattgtatcagtgccactacagctacagtgcctgtggacttggctccgatggaacaaataggcttgtacagttggtgcaagagatgcagcatagtaaatcatctaaattagatggtggggcattatatggagcaaagattacgggtggaggttctggcggaacagtttgcgcggttggcaggaattgcctgaagagcagccaacaaatatttgagattcagcagagatacaaagctgcaactgggtatttgccatatatttttgagggctcatcaccaggtgcaggcaaatttgggcatctaagaatccggcgccgctctgtcaagctgaactag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005911 GO:0005975 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009506 GO:0009702 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019200 GO:0030054 GO:0044237 GO:0044238 GO:0044262 GO:0044424 GO:0044444 GO:0044464 GO:0046835 GO:0055044 GO:0071704

KEGG Pathways

Metabolic & Signaling

ko00520 ko01100 map00520 map01100

Pfam Domains

Protein Families

GHMP_kinases_C GHMP_kinases_N GalKase_gal_bdg Glyco_trans_1_3

Protein Analysis

990

Amino Acids

109.01

Weight (kDa)

6.0

Isoelectric Point (pI)

45.38

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006249)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G42850 AT3G42850 AT4G16130
fragaria_vesca	FvH4_2g36460 FvH4_2g36460 FvH4_2g36460
malus_domestica	MD08G1124400.v1.1 MD15G1103100.v1.1
prunus_persica	Prupe.1G456000_v2.0.a1 Prupe.1G456000_v2.0.a1 Prupe.1G456000_v2.0.a1 Prupe.1G456000_v2.0.a1 Prupe.1G456000_v2.0.a1 Prupe.1G456000_v2.0.a1 Prupe.1G456000_v2.0.a1
pyrus_communis	pycom08g10310 pycom15g09400
rosa_chinensis	RchiOBHm_Chr6g0305421
rosa_laevigata	RLG00000010892
rosa_multiflora	Rmu_sc0002782.1_g000020
rosa_roxburghii	Rroxscaffold_7G00162820
rosa_rugosa	Rorug06G0340200
rosa_samantha	Rh6AG452200 Rh6BG449500 Rh6CG466000 Rh6DG452700
rosa_wichuraiana	Rw6G039400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	359
AatII	GACGTC	1 cut(s)	135
AccB1I	GGYRCC	3 cut(s)	295, 2246, 2949
AccB7I	CCANNNNNTGG	1 cut(s)	2038
AccBSI	CCGCTC	3 cut(s)	227, 1450, 2955
AccI	GTMKAC	1 cut(s)	2276
AccII	CGCG	3 cut(s)	35, 99, 2810
AccIII	TCCGGA	2 cut(s)	154, 1921
AclWI	GGATC	8 cut(s)	261, 532, 612, 1267, 1749, 1805, 2239, 2504
AcoI	YGGCCR	4 cut(s)	73, 85, 1212, 2167
AcsI	RAATTY	7 cut(s)	408, 784, 1488, 2160, 2563, 2605, 2927
AcuI	CTGAAG	3 cut(s)	342, 2391, 2849
AcvI	CACGTG	1 cut(s)	139
AcyI	GRCGYC	2 cut(s)	132, 2950
AdeI	CACNNNGTG	1 cut(s)	2918
AfaI	GTAC	6 cut(s)	180, 591, 912, 1878, 2145, 2706
AfiI	CCNNNNNNNGG	8 cut(s)	39, 628, 735, 1647, 2038, 2182, 2575, 2921
AjiI	CACGTC	2 cut(s)	171, 2173
AjuI	GAANNNNNNNTTGG	4 cut(s)	1095, 1127, 1239, 1271
AleI	CACNNNNGTG	1 cut(s)	98
Alw21I	GWGCWC	5 cut(s)	154, 1301, 1507, 2062, 2539
Alw26I	GTCTC	9 cut(s)	34, 278, 367, 1009, 1597, 1699, 1821, 1942, 2301
AlwI	GGATC	8 cut(s)	261, 532, 612, 1267, 1749, 1805, 2239, 2504
AlwNI	CAGNNNCTG	3 cut(s)	836, 1629, 2670
Ama87I	CYCGRG	1 cut(s)	2441
Aor13HI	TCCGGA	2 cut(s)	154, 1921
AoxI	GGCC	6 cut(s)	18, 73, 85, 742, 1212, 2167
ApoI	RAATTY	7 cut(s)	408, 784, 1488, 2160, 2563, 2605, 2927
ArsI	GACNNNNNNTTYG	2 cut(s)	183, 215
Asp700I	GAANNNNTTC	1 cut(s)	2191
AspLEI	GCGC	2 cut(s)	2810, 2952
AspS9I	GGNCC	3 cut(s)	1093, 1195, 2077
AsuC2I	CCSGG	1 cut(s)	124
AsuII	TTCGAA	1 cut(s)	1252
AvaI	CYCGRG	1 cut(s)	2441
AvaII	GGWCC	3 cut(s)	1093, 1195, 2077
BalI	TGGCCA	2 cut(s)	1214, 2169
BanI	GGYRCC	3 cut(s)	295, 2246, 2949
BanII	GRGCYC	4 cut(s)	154, 1301, 2062, 2909
BbrPI	CACGTG	1 cut(s)	139
BbsI	GAAGAC	2 cut(s)	46, 1329
Bbv12I	GWGCWC	5 cut(s)	154, 1301, 1507, 2062, 2539
BbvCI	CCTCAGC	1 cut(s)	2139
BccI	CCATC	7 cut(s)	350, 703, 729, 2068, 2342, 2681, 2744
BceAI	ACGGC	3 cut(s)	94, 303, 2640
BciVI	GTATCC	2 cut(s)	545, 1918
BclI	TGATCA	2 cut(s)	2482, 2614
BcnI	CCSGG	1 cut(s)	124
BcoDI	GTCTC	9 cut(s)	34, 278, 367, 1009, 1597, 1699, 1821, 1942, 2301
BfaI	CTAG	6 cut(s)	644, 1397, 1614, 1871, 2544, 2971
BfmI	CTRYAG	6 cut(s)	393, 1458, 1977, 2277, 2656, 2662
BfoI	RGCGCY	1 cut(s)	2953
BfuI	GTATCC	2 cut(s)	545, 1918
BglII	AGATCT	2 cut(s)	1345, 2014
Bme18I	GGWCC	3 cut(s)	1093, 1195, 2077
BmeT110I	CYCGRG	1 cut(s)	2441
BmgBI	CACGTC	2 cut(s)	171, 2173
BmgT120I	GGNCC	3 cut(s)	1093, 1195, 2077
BmiI	GGNNCC	7 cut(s)	44, 297, 1196, 1197, 2248, 2683, 2951
BmrI	ACTGGG	3 cut(s)	1132, 2489, 2889
BmuI	ACTGGG	3 cut(s)	1132, 2489, 2889
BpiI	GAAGAC	2 cut(s)	46, 1329
BplI	GAGNNNNNCTC	4 cut(s)	984, 1016, 1283, 1315
BpmI	CTGGAG	1 cut(s)	2489
Bpu10I	CCTNAGC	2 cut(s)	1089, 2139
Bpu14I	TTCGAA	1 cut(s)	1252
BpuEI	CTTGAG	2 cut(s)	977, 1046
BpuMI	CCSGG	1 cut(s)	124
BsaAI	YACGTR	1 cut(s)	139
BsaHI	GRCGYC	2 cut(s)	132, 2950
BsaI	GGTCTC	2 cut(s)	367, 1009
BsaJI	CCNNGG	7 cut(s)	76, 299, 547, 730, 1198, 1641, 1990
BsaWI	WCCGGW	3 cut(s)	146, 154, 1921
BsaXI	ACNNNNNCTCC	6 cut(s)	14, 44, 136, 166, 167, 197
Bsc4I	CCNNNNNNNGG	8 cut(s)	39, 628, 735, 1647, 2038, 2182, 2575, 2921
Bse118I	RCCGGY	1 cut(s)	71
Bse1I	ACTGG	5 cut(s)	377, 1009, 1127, 2495, 2884
Bse3DI	GCAATG	1 cut(s)	2127
BseAI	TCCGGA	2 cut(s)	154, 1921
BseDI	CCNNGG	7 cut(s)	76, 299, 547, 730, 1198, 1641, 1990
BseGI	GGATG	7 cut(s)	244, 373, 740, 1768, 2328, 2350, 2548
BseLI	CCNNNNNNNGG	8 cut(s)	39, 628, 735, 1647, 2038, 2182, 2575, 2921
BseMI	GCAATG	1 cut(s)	2127
BseMII	CTCAG	4 cut(s)	429, 1103, 1419, 2130
BseNI	ACTGG	5 cut(s)	377, 1009, 1127, 2495, 2884
BseRI	GAGGAG	2 cut(s)	619, 731
BseYI	CCCAGC	2 cut(s)	438, 847
BsgI	GTGCAG	1 cut(s)	2940
Bsh1236I	CGCG	3 cut(s)	35, 99, 2810
BshFI	GGCC	6 cut(s)	20, 75, 87, 744, 1214, 2169
BshNI	GGYRCC	3 cut(s)	295, 2246, 2949
BsiHKAI	GWGCWC	5 cut(s)	154, 1301, 1507, 2062, 2539
BsiHKCI	CYCGRG	1 cut(s)	2441
BsiSI	CCGG	8 cut(s)	72, 123, 147, 155, 474, 1464, 1922, 2947
BslFI	GGGAC	3 cut(s)	455, 1181, 1992
BslI	CCNNNNNNNGG	8 cut(s)	39, 628, 735, 1647, 2038, 2182, 2575, 2921
BsmAI	GTCTC	9 cut(s)	34, 278, 367, 1009, 1597, 1699, 1821, 1942, 2301
BsmBI	CGTCTC	2 cut(s)	278, 1821
BsmFI	GGGAC	3 cut(s)	455, 1181, 1992
BsmI	GAATGC	3 cut(s)	569, 887, 2579
BsnI	GGCC	6 cut(s)	20, 75, 87, 744, 1214, 2169
Bso31I	GGTCTC	2 cut(s)	367, 1009
BsoBI	CYCGRG	1 cut(s)	2441
Bsp119I	TTCGAA	1 cut(s)	1252
Bsp1286I	GDGCHC	6 cut(s)	154, 1301, 1507, 2062, 2539, 2909
Bsp13I	TCCGGA	2 cut(s)	154, 1921
Bsp1407I	TGTACA	1 cut(s)	2704
Bsp19I	CCATGG	1 cut(s)	1990
BspANI	GGCC	6 cut(s)	20, 75, 87, 744, 1214, 2169
BspCNI	CTCAG	4 cut(s)	428, 1102, 1420, 2131
BspEI	TCCGGA	2 cut(s)	154, 1921
BspFNI	CGCG	3 cut(s)	35, 99, 2810
BspLI	GGNNCC	7 cut(s)	44, 297, 1196, 1197, 2248, 2683, 2951
BspMAI	CTGCAG	2 cut(s)	397, 1462
BspPI	GGATC	8 cut(s)	261, 532, 612, 1267, 1749, 1805, 2239, 2504
BspQI	GCTCTTC	2 cut(s)	1376, 2825
BspT104I	TTCGAA	1 cut(s)	1252
BspT107I	GGYRCC	3 cut(s)	295, 2246, 2949
BspTNI	GGTCTC	2 cut(s)	367, 1009
BsrBI	CCGCTC	3 cut(s)	227, 1450, 2955
BsrDI	GCAATG	1 cut(s)	2127
BsrFI	RCCGGY	1 cut(s)	71
BsrGI	TGTACA	1 cut(s)	2704
BsrI	ACTGG	5 cut(s)	377, 1009, 1127, 2495, 2884
BssAI	RCCGGY	1 cut(s)	71
BssECI	CCNNGG	7 cut(s)	76, 299, 547, 730, 1198, 1641, 1990
BssNI	GRCGYC	2 cut(s)	132, 2950
BssT1I	CCWWGG	2 cut(s)	299, 1990
Bst6I	CTCTTC	6 cut(s)	9, 200, 1376, 1475, 1945, 2825
BstACI	GRCGYC	2 cut(s)	132, 2950
BstAPI	GCANNNNNTGC	5 cut(s)	401, 806, 1838, 2722, 2823
BstAUI	TGTACA	1 cut(s)	2704
BstBAI	YACGTR	1 cut(s)	139
BstBI	TTCGAA	1 cut(s)	1252
BstC8I	GCNNGC	9 cut(s)	385, 567, 798, 1032, 1585, 1638, 2132, 2136, 2923
BstDEI	CTNAG	6 cut(s)	415, 1089, 1139, 1428, 2139, 2939
BstDSI	CCRYGG	2 cut(s)	76, 1990
BstEII	GGTNACC	2 cut(s)	142, 2489
BstF5I	GGATG	7 cut(s)	244, 373, 740, 1768, 2328, 2350, 2548
BstFNI	CGCG	3 cut(s)	35, 99, 2810
BstH2I	RGCGCY	1 cut(s)	2953
BstHHI	GCGC	2 cut(s)	2810, 2952
BstMAI	GTCTC	9 cut(s)	34, 278, 367, 1009, 1597, 1699, 1821, 1942, 2301
BstNSI	RCATGY	2 cut(s)	1640, 2097
BstPI	GGTNACC	2 cut(s)	142, 2489
BstSFI	CTRYAG	6 cut(s)	393, 1458, 1977, 2277, 2656, 2662
BstUI	CGCG	3 cut(s)	35, 99, 2810
BstV2I	GAAGAC	2 cut(s)	46, 1329
BstX2I	RGATCY	6 cut(s)	617, 1345, 1741, 1810, 2014, 2231
BstXI	CCANNNNNNTGG	2 cut(s)	100, 702
BstYI	RGATCY	6 cut(s)	617, 1345, 1741, 1810, 2014, 2231
BsuI	GTATCC	2 cut(s)	545, 1918
BsuRI	GGCC	6 cut(s)	20, 75, 87, 744, 1214, 2169
BtgI	CCRYGG	2 cut(s)	76, 1990
BtrI	CACGTC	2 cut(s)	171, 2173
BtsCI	GGATG	7 cut(s)	244, 373, 740, 1768, 2328, 2350, 2548
BtsIMutI	CAGTG	7 cut(s)	255, 523, 867, 1002, 2215, 2654, 2671
Cac8I	GCNNGC	9 cut(s)	385, 567, 798, 1032, 1585, 1638, 2132, 2136, 2923
CaiI	CAGNNNCTG	3 cut(s)	836, 1629, 2670
CfoI	GCGC	2 cut(s)	2810, 2952
Cfr10I	RCCGGY	1 cut(s)	71
Cfr13I	GGNCC	3 cut(s)	1093, 1195, 2077
CseI	GACGC	3 cut(s)	24, 95, 2468
CsiI	ACCWGGT	2 cut(s)	354, 2914
Csp6I	GTAC	6 cut(s)	179, 590, 911, 1877, 2144, 2705
CspCI	CAANNNNNGTGG	2 cut(s)	667, 702
CviQI	GTAC	6 cut(s)	179, 590, 911, 1877, 2144, 2705
DdeI	CTNAG	6 cut(s)	415, 1089, 1139, 1428, 2139, 2939
DinI	GGCGCC	1 cut(s)	2951
DraI	TTTAAA	1 cut(s)	1044
DraIII	CACNNNGTG	1 cut(s)	2918
DrdI	GACNNNNNNGTC	1 cut(s)	359
DseDI	GACNNNNNNGTC	1 cut(s)	359
EaeI	YGGCCR	4 cut(s)	73, 85, 1212, 2167
Eam1104I	CTCTTC	6 cut(s)	9, 200, 1376, 1475, 1945, 2825
EarI	CTCTTC	6 cut(s)	9, 200, 1376, 1475, 1945, 2825
EciI	GGCGGA	4 cut(s)	251, 530, 1406, 2811
Ecl136II	GAGCTC	3 cut(s)	152, 1299, 2060
Eco130I	CCWWGG	2 cut(s)	299, 1990
Eco24I	GRGCYC	4 cut(s)	154, 1301, 2062, 2909
Eco31I	GGTCTC	2 cut(s)	367, 1009
Eco47I	GGWCC	3 cut(s)	1093, 1195, 2077
Eco53kI	GAGCTC	3 cut(s)	152, 1299, 2060
Eco57I	CTGAAG	3 cut(s)	342, 2391, 2849
Eco72I	CACGTG	1 cut(s)	139
Eco88I	CYCGRG	1 cut(s)	2441
Eco91I	GGTNACC	2 cut(s)	142, 2489
EcoICRI	GAGCTC	3 cut(s)	152, 1299, 2060
EcoO109I	RGGNCCY	2 cut(s)	1093, 1195
EcoO65I	GGTNACC	2 cut(s)	142, 2489
EcoRI	GAATTC	1 cut(s)	408
EcoT14I	CCWWGG	2 cut(s)	299, 1990
EcoT22I	ATGCAT	1 cut(s)	1319
EcoT38I	GRGCYC	4 cut(s)	154, 1301, 2062, 2909
EgeI	GGCGCC	1 cut(s)	2951
EheI	GGCGCC	1 cut(s)	2951
ErhI	CCWWGG	2 cut(s)	299, 1990
Esp3I	CGTCTC	2 cut(s)	278, 1821
FalI	AAGNNNNNCTT	2 cut(s)	1567, 1599
FaqI	GGGAC	3 cut(s)	455, 1181, 1992
FauI	CCCGC	2 cut(s)	629, 1834
FauNDI	CATATG	4 cut(s)	1408, 1699, 1780, 1834
FbaI	TGATCA	2 cut(s)	2482, 2614
FblI	GTMKAC	1 cut(s)	2276
FokI	GGATG	7 cut(s)	251, 380, 747, 1755, 2335, 2357, 2535
FriOI	GRGCYC	4 cut(s)	154, 1301, 2062, 2909
FspBI	CTAG	6 cut(s)	644, 1397, 1614, 1871, 2544, 2971
GlaI	GCGC	2 cut(s)	2809, 2951
GsaI	CCCAGC	2 cut(s)	442, 851
GsuI	CTGGAG	1 cut(s)	2489
HaeII	RGCGCY	1 cut(s)	2953
HaeIII	GGCC	6 cut(s)	20, 75, 87, 744, 1214, 2169
HapII	CCGG	8 cut(s)	72, 123, 147, 155, 474, 1464, 1922, 2947
HgaI	GACGC	3 cut(s)	24, 95, 2468
HhaI	GCGC	2 cut(s)	2810, 2952
Hin1I	GRCGYC	2 cut(s)	132, 2950
Hin6I	GCGC	2 cut(s)	2808, 2950
HinP1I	GCGC	2 cut(s)	2808, 2950
HindIII	AAGCTT	5 cut(s)	794, 1136, 1581, 2111, 2373
HpaII	CCGG	8 cut(s)	72, 123, 147, 155, 474, 1464, 1922, 2947
Hpy166II	GTNNAC	6 cut(s)	136, 689, 1619, 1877, 2277, 2675
Hpy8I	GTNNAC	6 cut(s)	136, 689, 1619, 1877, 2277, 2675
Hpy99I	CGWCG	2 cut(s)	26, 175
HpyAV	CCTTC	6 cut(s)	1052, 1106, 1146, 1447, 1919, 2029
HpyCH4IV	ACGT	6 cut(s)	66, 132, 138, 170, 588, 2172
HpyF3I	CTNAG	6 cut(s)	415, 1089, 1139, 1428, 2139, 2939
HpySE526I	ACGT	6 cut(s)	66, 132, 138, 170, 588, 2172
Hsp92I	GRCGYC	2 cut(s)	132, 2950
HspAI	GCGC	2 cut(s)	2808, 2950
KasI	GGCGCC	1 cut(s)	2949
KflI	GGGWCCC	1 cut(s)	1195
Kpn2I	TCCGGA	2 cut(s)	154, 1921
Ksp22I	TGATCA	2 cut(s)	2482, 2614
LguI	GCTCTTC	2 cut(s)	1376, 2825
LmnI	GCTCC	9 cut(s)	149, 157, 224, 772, 1304, 2057, 2065, 2687, 2768
MabI	ACCWGGT	2 cut(s)	354, 2914
MaeI	CTAG	6 cut(s)	644, 1397, 1614, 1871, 2544, 2971
MaeII	ACGT	6 cut(s)	66, 132, 138, 170, 588, 2172
MaeIII	GTNAC	9 cut(s)	67, 107, 142, 424, 894, 2400, 2456, 2489, 2497
MbiI	CCGCTC	3 cut(s)	227, 1450, 2955
MfeI	CAATTG	1 cut(s)	1474
MflI	RGATCY	6 cut(s)	617, 1345, 1741, 1810, 2014, 2231
MhlI	GDGCHC	6 cut(s)	154, 1301, 1507, 2062, 2539, 2909
MlsI	TGGCCA	2 cut(s)	1214, 2169
MluNI	TGGCCA	2 cut(s)	1214, 2169
Mly113I	GGCGCC	1 cut(s)	2950
MlyI	GAGTC	5 cut(s)	36, 186, 314, 1461, 2453
MmeI	TCCRAC	3 cut(s)	153, 2035, 2240
Mox20I	TGGCCA	2 cut(s)	1214, 2169
Mph1103I	ATGCAT	1 cut(s)	1319
MroI	TCCGGA	2 cut(s)	154, 1921
MroXI	GAANNNNTTC	1 cut(s)	2191
MscI	TGGCCA	2 cut(s)	1214, 2169
MseI	TTAA	7 cut(s)	245, 1043, 1859, 1884, 1997, 2430, 2574
MslI	CAYNNNNRTG	1 cut(s)	98
Msp20I	TGGCCA	2 cut(s)	1214, 2169
MspA1I	CMGCKG	1 cut(s)	398
MspI	CCGG	8 cut(s)	72, 123, 147, 155, 474, 1464, 1922, 2947
MunI	CAATTG	1 cut(s)	1474
Mva1269I	GAATGC	3 cut(s)	569, 887, 2579
MvnI	CGCG	3 cut(s)	35, 99, 2810
NarI	GGCGCC	1 cut(s)	2950
NciI	CCSGG	1 cut(s)	124
NcoI	CCATGG	1 cut(s)	1990
NdeI	CATATG	4 cut(s)	1408, 1699, 1780, 1834
NlaIV	GGNNCC	7 cut(s)	44, 297, 1196, 1197, 2248, 2683, 2951
NmeAIII	GCCGAG	2 cut(s)	413, 1627
NmuCI	GTSAC	7 cut(s)	67, 107, 142, 424, 2400, 2456, 2489
NsiI	ATGCAT	1 cut(s)	1319
NspI	RCATGY	2 cut(s)	1640, 2097
NspV	TTCGAA	1 cut(s)	1252
OliI	CACNNNNGTG	1 cut(s)	98
PaeI	GCATGC	1 cut(s)	1640
PciSI	GCTCTTC	2 cut(s)	1376, 2825
PcsI	WCGNNNNNNNCGW	3 cut(s)	63, 96, 103
PctI	GAATGC	3 cut(s)	569, 887, 2579
PdmI	GAANNNNTTC	1 cut(s)	2191
PfeI	GAWTC	9 cut(s)	115, 1333, 1400, 1412, 2044, 2192, 2326, 2854, 2943
PflFI	GACNNNGTC	1 cut(s)	26
PflMI	CCANNNNNTGG	1 cut(s)	2038
PfoI	TCCNGGA	1 cut(s)	38
PleI	GAGTC	5 cut(s)	35, 186, 313, 1461, 2452
PluTI	GGCGCC	1 cut(s)	2953
PmaCI	CACGTG	1 cut(s)	139
PmlI	CACGTG	1 cut(s)	139
PpsI	GAGTC	5 cut(s)	35, 186, 313, 1461, 2452
Ppu21I	YACGTR	1 cut(s)	139
PpuMI	RGGWCCY	2 cut(s)	1093, 1195
Psp124BI	GAGCTC	3 cut(s)	154, 1301, 2062
Psp5II	RGGWCCY	2 cut(s)	1093, 1195
PspCI	CACGTG	1 cut(s)	139
PspEI	GGTNACC	2 cut(s)	142, 2489
PspFI	CCCAGC	2 cut(s)	438, 847
PspN4I	GGNNCC	7 cut(s)	44, 297, 1196, 1197, 2248, 2683, 2951
PspPI	GGNCC	3 cut(s)	1093, 1195, 2077
PspPPI	RGGWCCY	2 cut(s)	1093, 1195
PsrI	GAACNNNNNNTAC	2 cut(s)	1860, 1892
PstI	CTGCAG	2 cut(s)	397, 1462
PstNI	CAGNNNCTG	3 cut(s)	836, 1629, 2670
PsuI	RGATCY	6 cut(s)	617, 1345, 1741, 1810, 2014, 2231
PsyI	GACNNNGTC	1 cut(s)	26
PvuII	CAGCTG	1 cut(s)	398
RsaI	GTAC	6 cut(s)	180, 591, 912, 1878, 2145, 2706
RsaNI	GTAC	6 cut(s)	179, 590, 911, 1877, 2144, 2705
RseI	CAYNNNNRTG	1 cut(s)	98
SacI	GAGCTC	3 cut(s)	154, 1301, 2062
SapI	GCTCTTC	2 cut(s)	1376, 2825
SaqAI	TTAA	7 cut(s)	245, 1043, 1859, 1884, 1997, 2430, 2574
Sau96I	GGNCC	3 cut(s)	1093, 1195, 2077
SchI	GAGTC	5 cut(s)	36, 186, 314, 1461, 2453
SduI	GDGCHC	6 cut(s)	154, 1301, 1507, 2062, 2539, 2909
SexAI	ACCWGGT	2 cut(s)	354, 2914
SfcI	CTRYAG	6 cut(s)	393, 1458, 1977, 2277, 2656, 2662
SfoI	GGCGCC	1 cut(s)	2951
SfuI	TTCGAA	1 cut(s)	1252
SinI	GGWCC	3 cut(s)	1093, 1195, 2077
SmiMI	CAYNNNNRTG	1 cut(s)	98
SmlI	CTYRAG	2 cut(s)	956, 1025
SmoI	CTYRAG	2 cut(s)	956, 1025
SphI	GCATGC	1 cut(s)	1640
SspDI	GGCGCC	1 cut(s)	2949
SspI	AATATT	1 cut(s)	2847
SspMI	CTAG	6 cut(s)	644, 1397, 1614, 1871, 2544, 2971
SstI	GAGCTC	3 cut(s)	154, 1301, 2062
StyI	CCWWGG	2 cut(s)	299, 1990
TaiI	ACGT	6 cut(s)	69, 135, 141, 173, 591, 2175
TaqI	TCGA	2 cut(s)	190, 1252
TatI	WGTACW	1 cut(s)	2704
TauI	GCSGC	2 cut(s)	1438, 2955
TfiI	GAWTC	9 cut(s)	115, 1333, 1400, 1412, 2044, 2192, 2326, 2854, 2943
Tru1I	TTAA	7 cut(s)	245, 1043, 1859, 1884, 1997, 2430, 2574
Tru9I	TTAA	7 cut(s)	245, 1043, 1859, 1884, 1997, 2430, 2574
TscAI	CASTG	7 cut(s)	255, 530, 874, 1009, 2215, 2654, 2671
TseFI	GTSAC	7 cut(s)	67, 107, 142, 424, 2400, 2456, 2489
Tsp45I	GTSAC	7 cut(s)	67, 107, 142, 424, 2400, 2456, 2489
TspGWI	ACGGA	5 cut(s)	39, 563, 1776, 1803, 2052
TspRI	CASTG	7 cut(s)	255, 530, 874, 1009, 2215, 2654, 2671
Tth111I	GACNNNGTC	1 cut(s)	26
Van91I	CCANNNNNTGG	1 cut(s)	2038
VpaK11BI	GGWCC	3 cut(s)	1093, 1195, 2077
XapI	RAATTY	7 cut(s)	408, 784, 1488, 2160, 2563, 2605, 2927
XceI	RCATGY	2 cut(s)	1640, 2097
XmiI	GTMKAC	1 cut(s)	2276
XmnI	GAANNNNTTC	1 cut(s)	2191
XspI	CTAG	6 cut(s)	644, 1397, 1614, 1871, 2544, 2971
ZraI	GACGTC	1 cut(s)	133
Zsp2I	ATGCAT	1 cut(s)	1319

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.