Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0006249

Physical Location & Seq

Genomic Coordinates Forward (+)

6137560 .. 6142531

Gene Structure 4972 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g09400.14

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1866 bp

ATGAGGATTGACGAAGAGAGCGAAGGAGTGTCGGCGTCGAGGAAACACCTGGTCTTCGCTTACTACGTCACCGGCCACGGCTTCGGCCACGCCACTCGCGTCGTCGAGGTTGCGCGGCACCTGATTCTCGCCGGCCACGATGTCCACGTCGTCACCGGAGCTCCAGACTTCGTCTTCACTTCCGAGATTCAATCGCCTCGCCTCTTCATTCGAAAGGTTCTTCTGGACTGTGGAGCTGTTCAGGCAGATGCTTTAACAGTTGATCGTCTTGCTTCCTTGGCGAAGTATTCGGAGACAGCTGTGGCACCTCGGGCTTCAATCTTGAAAACGGAAGTGGAGTGGCTGACCTCCATCAAAGCTGATTTAGTGGTCTCTGATGTTGTTCCAGTTGCGTGCCATGCAGCGGCTGATGCAGGAATTCGATCTGTTTGTGTCACCAACTTCAGTTGGGACTTTATCTATGCAGAGTATGTTATGGCTGCTGGAGATAATCATCGTTCAATCGTTTGGCAGATAGCAGAAGATTATTCCCACTGTGAGTTCCTCATCCGCCTCCCAGGATACTGCCCAATGCCTGCTTTCCGTGATGTAGTTGATGTACCTCTAGTTGTGAGGAGGTTTCGCAGATCCCGCAAAGAGGTGAGGGAGGAACTTGGAATTGGAGATGATGTAACTCTAGTCATCCTCAATTTTGGTGGACAGCCAGCAGGCTGGAATTTGAAGGAAGAGTTTTTACCCCCTGGATGGCTGTGCCTGGTTTGTGGTGGTTCTGACACCCAGGAGCTTCCGTCAAATTTCATAAAGCTTGCAAAAGATGCTTATACACCTGATTTTATGGCAGCGTCTGACTGTATGCTTGGAAAAATTGGATATGGCACTGTGAGTGAAGCTCTTGCATACAAGTTACCTTTTGTCTTTGTACGCAGAGATTATTTCAATGAAGAACCTTTCTTGAGAAATATGCTTGAGTATTATCAAGGTGGTGTTGAGATGATTAGGAGGGACTTGCTTACTGGTCACTGGAAACCTTACCTTGAGCGTGCAATCAGTTTGAAGCCATGCTATGAAGGAGGTATCAATGGTGGTGAGGTGGCAGCTCACATCCTGCAGGAGACTGCTATTGGGAAAAACTATGCATCAGATAAGCTAAGTGGGGCAAGAAGATTGCGTGATGCCATAATTCTTGGGTATCAACTACAAAGGGTACCTGGACGAGATATGGCAATTCCTGAATGGTATGCAAATGCGGAAAGTGAACTTGGAATTGGATCACCTACTTGCAAAGTGAGCGTGAAGAGCTCCCTAATGAACTCATGCACTGAAGACTTCGAGATTCTTCATGGAGATCTTCATGGTATTTCAGATACAATGACTTTTTTGAAGAGCTTGGCAGAACTAGATTCTGTTTATTACTCTGAAAAAACTACTGAGAAGCGCCGGGAGCGCAAGGCTGCAGCTGGACTCTTCAACTGGGAGGAAGAAATTTTTGTGGCAAGAGCACCTGGACGGTTGGACGTAATGGGAGGGATTGCTGACTATTCAGGAAGCCTGGTCTTGCAGATGCCGATAAAGGAAGCCTGCCATGTTGCTATACAACGAAATCATCCAAGTAAACATAGGCTCTGGAAACATGTCCTGGCCCGGCAGCAGGCAGAAGGACGAAACCCAACACCTGTCCTGCAAATTGTCTCATATGGTTCAGAGTTAAGCAACCGTAGCCCAACGTTTGACATGGATCGATCTTTAGTCCGTCAGATTTTATGGACGGAGATAAACCAATGTCATATGAGAAGGCAAAGAAATACTTTTCACAAGATCCATCCCAAAAGTGGGCGGCATATGTTGCAGGTGTCATTCTGGTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005911 GO:0005975 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009506 GO:0009702 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019200 GO:0030054 GO:0044237 GO:0044238 GO:0044262 GO:0044424 GO:0044444 GO:0044464 GO:0046835 GO:0055044 GO:0071704

KEGG Pathways

Metabolic & Signaling

ko00520 ko01100 map00520 map01100

Pfam Domains

Protein Families

GHMP_kinases_C GHMP_kinases_N GalKase_gal_bdg Glyco_trans_1_3

Protein Analysis

622

Amino Acids

69.82

Weight (kDa)

6.61

Isoelectric Point (pI)

49.7

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006249)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G42850 AT3G42850 AT4G16130
fragaria_vesca	FvH4_2g36460 FvH4_2g36460 FvH4_2g36460
malus_domestica	MD08G1124400.v1.1 MD15G1103100.v1.1
prunus_persica	Prupe.1G456000_v2.0.a1 Prupe.1G456000_v2.0.a1 Prupe.1G456000_v2.0.a1 Prupe.1G456000_v2.0.a1 Prupe.1G456000_v2.0.a1 Prupe.1G456000_v2.0.a1 Prupe.1G456000_v2.0.a1
pyrus_communis	pycom08g10310 pycom15g09400
rosa_chinensis	RchiOBHm_Chr6g0305421
rosa_laevigata	RLG00000010892
rosa_multiflora	Rmu_sc0002782.1_g000020
rosa_roxburghii	Rroxscaffold_7G00162820
rosa_rugosa	Rorug06G0340200
rosa_samantha	Rh6AG452200 Rh6BG449500 Rh6CG466000 Rh6DG452700
rosa_wichuraiana	Rw6G039400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1837
Acc36I	ACCTGC	1 cut(s)	1837
Acc65I	GGTACC	1 cut(s)	1204
AccB1I	GGYRCC	3 cut(s)	117, 304, 1204
AccII	CGCG	2 cut(s)	99, 115
AciI	CCGC	6 cut(s)	115, 404, 550, 631, 1247, 1834
AclI	AACGTT	1 cut(s)	1724
AclWI	GGATC	4 cut(s)	621, 1276, 1743, 1810
AcoI	YGGCCR	3 cut(s)	73, 85, 133
AcsI	RAATTY	4 cut(s)	417, 715, 793, 1482
AcuI	CTGAAG	2 cut(s)	427, 1341
AcyI	GRCGYC	1 cut(s)	35
AfaI	GTAC	3 cut(s)	600, 921, 1206
AfiI	CCNNNNNNNGG	6 cut(s)	403, 637, 744, 1648, 1829, 1830
AflIII	ACRYGT	1 cut(s)	1630
AgsI	TTSAA	9 cut(s)	191, 318, 325, 501, 721, 937, 1054, 1381, 1468
AjiI	CACGTC	1 cut(s)	148
AjnI	CCWGG	9 cut(s)	48, 556, 739, 753, 777, 1207, 1501, 1548, 1635
AjuI	GAANNNNNNNTTGG	6 cut(s)	642, 674, 1242, 1248, 1274, 1280
Alw21I	GWGCWC	3 cut(s)	163, 1301, 1501
Alw26I	GTCTC	4 cut(s)	287, 376, 1106, 1693
AlwI	GGATC	4 cut(s)	621, 1276, 1743, 1810
AlwNI	CAGNNNCTG	2 cut(s)	407, 845
Ama87I	CYCGRG	1 cut(s)	309
AoxI	GGCC	4 cut(s)	73, 85, 133, 1638
ApeKI	GCWGC	7 cut(s)	401, 479, 839, 1094, 1451, 1454, 1645
ApoI	RAATTY	4 cut(s)	417, 715, 793, 1482
Asp718I	GGTACC	1 cut(s)	1204
AspLEI	GCGC	3 cut(s)	115, 1437, 1446
AspS9I	GGNCC	1 cut(s)	1639
AsuC2I	CCSGG	2 cut(s)	1439, 1642
AsuHPI	GGTGA	6 cut(s)	61, 145, 427, 652, 1097, 1263
AsuII	TTCGAA	1 cut(s)	211
AvaI	CYCGRG	1 cut(s)	309
BanI	GGYRCC	3 cut(s)	117, 304, 1204
BanII	GRGCYC	2 cut(s)	163, 1301
BarI	GAAGNNNNNNTAC	2 cut(s)	717, 749
BbsI	GAAGAC	3 cut(s)	46, 166, 1329
Bbv12I	GWGCWC	3 cut(s)	163, 1301, 1501
BbvI	GCAGC	7 cut(s)	413, 466, 851, 1106, 1438, 1466, 1657
BccI	CCATC	3 cut(s)	359, 738, 1827
BceAI	ACGGC	1 cut(s)	94
BciT130I	CCWGG	9 cut(s)	50, 558, 741, 755, 779, 1209, 1503, 1550, 1637
BciVI	GTATCC	1 cut(s)	554
BcnI	CCSGG	2 cut(s)	1439, 1642
BcoDI	GTCTC	4 cut(s)	287, 376, 1106, 1693
BfaI	CTAG	3 cut(s)	605, 677, 1397
BfmI	CTRYAG	2 cut(s)	1106, 1452
BfoI	RGCGCY	1 cut(s)	1438
BfuAI	ACCTGC	1 cut(s)	1837
BfuI	GTATCC	1 cut(s)	554
BglII	AGATCT	1 cut(s)	1345
BmeT110I	CYCGRG	1 cut(s)	309
BmgBI	CACGTC	1 cut(s)	148
BmgT120I	GGNCC	1 cut(s)	1639
BmiI	GGNNCC	3 cut(s)	119, 306, 1206
BmrI	ACTGGG	1 cut(s)	1480
BmsI	GCATC	6 cut(s)	238, 400, 805, 1145, 1162, 1551
BmuI	ACTGGG	1 cut(s)	1480
BpiI	GAAGAC	3 cut(s)	46, 166, 1329
BplI	GAGNNNNNCTC	2 cut(s)	874, 906
BpmI	CTGGAG	2 cut(s)	147, 504
Bpu14I	TTCGAA	1 cut(s)	211
BpuEI	CTTGAG	3 cut(s)	973, 986, 1055
BpuMI	CCSGG	2 cut(s)	1439, 1642
Bsa29I	ATCGAT	1 cut(s)	1738
BsaBI	GATNNNNATC	1 cut(s)	492
BsaHI	GRCGYC	1 cut(s)	35
BsaI	GGTCTC	1 cut(s)	376
BsaJI	CCNNGG	6 cut(s)	76, 276, 308, 556, 739, 777
BsaWI	WCCGGW	1 cut(s)	155
BsaXI	ACNNNNNCTCC	6 cut(s)	145, 175, 654, 684, 773, 803
Bsc4I	CCNNNNNNNGG	6 cut(s)	403, 637, 744, 1648, 1829, 1830
Bse118I	RCCGGY	2 cut(s)	71, 131
Bse1I	ACTGG	4 cut(s)	386, 1018, 1025, 1475
Bse8I	GATNNNNATC	1 cut(s)	492
BseBI	CCWGG	9 cut(s)	50, 558, 741, 755, 779, 1209, 1503, 1550, 1637
BseCI	ATCGAT	1 cut(s)	1738
BseDI	CCNNGG	6 cut(s)	76, 276, 308, 556, 739, 777
BseGI	GGATG	6 cut(s)	546, 681, 749, 1101, 1603, 1819
BseJI	GATNNNNATC	1 cut(s)	492
BseLI	CCNNNNNNNGG	6 cut(s)	403, 637, 744, 1648, 1829, 1830
BseMII	CTCAG	1 cut(s)	1419
BseNI	ACTGG	4 cut(s)	386, 1018, 1025, 1475
BseRI	GAGGAG	1 cut(s)	628
BseXI	GCAGC	7 cut(s)	413, 466, 851, 1106, 1438, 1466, 1657
Bsh1236I	CGCG	2 cut(s)	99, 115
BshFI	GGCC	4 cut(s)	75, 87, 135, 1640
BshNI	GGYRCC	3 cut(s)	117, 304, 1204
BshVI	ATCGAT	1 cut(s)	1738
BsiHKAI	GWGCWC	3 cut(s)	163, 1301, 1501
BsiHKCI	CYCGRG	1 cut(s)	309
BsiSI	CCGG	5 cut(s)	72, 132, 156, 1438, 1642
BslFI	GGGAC	2 cut(s)	464, 1016
BslI	CCNNNNNNNGG	6 cut(s)	403, 637, 744, 1648, 1829, 1830
BsmAI	GTCTC	4 cut(s)	287, 376, 1106, 1693
BsmFI	GGGAC	2 cut(s)	464, 1016
BsnI	GGCC	4 cut(s)	75, 87, 135, 1640
Bso31I	GGTCTC	1 cut(s)	376
BsoBI	CYCGRG	1 cut(s)	309
Bsp119I	TTCGAA	1 cut(s)	211
Bsp1286I	GDGCHC	3 cut(s)	163, 1301, 1501
Bsp143I	GATC	8 cut(s)	262, 422, 626, 1268, 1345, 1735, 1739, 1815
BspACI	CCGC	6 cut(s)	115, 404, 550, 631, 1247, 1834
BspANI	GGCC	4 cut(s)	75, 87, 135, 1640
BspCNI	CTCAG	1 cut(s)	1420
BspDI	ATCGAT	1 cut(s)	1738
BspFNI	CGCG	2 cut(s)	99, 115
BspLI	GGNNCC	3 cut(s)	119, 306, 1206
BspMAI	CTGCAG	2 cut(s)	1110, 1456
BspMI	ACCTGC	1 cut(s)	1837
BspPI	GGATC	4 cut(s)	621, 1276, 1743, 1810
BspQI	GCTCTTC	2 cut(s)	1289, 1376
BspT104I	TTCGAA	1 cut(s)	211
BspT107I	GGYRCC	3 cut(s)	117, 304, 1204
BspTNI	GGTCTC	1 cut(s)	376
BsrFI	RCCGGY	2 cut(s)	71, 131
BsrI	ACTGG	4 cut(s)	386, 1018, 1025, 1475
BssAI	RCCGGY	2 cut(s)	71, 131
BssECI	CCNNGG	6 cut(s)	76, 276, 308, 556, 739, 777
BssMI	GATC	8 cut(s)	262, 422, 626, 1268, 1345, 1735, 1739, 1815
BssNI	GRCGYC	1 cut(s)	35
BssT1I	CCWWGG	1 cut(s)	276
Bst2UI	CCWGG	9 cut(s)	50, 558, 741, 755, 779, 1209, 1503, 1550, 1637
Bst4CI	ACNGT	7 cut(s)	230, 259, 536, 851, 880, 1509, 1715
Bst6I	CTCTTC	6 cut(s)	9, 209, 720, 1289, 1376, 1469
BstACI	GRCGYC	1 cut(s)	35
BstAPI	GCANNNNNTGC	2 cut(s)	815, 1843
BstBI	TTCGAA	1 cut(s)	211
BstC8I	GCNNGC	9 cut(s)	133, 394, 576, 705, 709, 807, 1041, 1579, 1650
BstDEI	CTNAG	2 cut(s)	1148, 1428
BstDSI	CCRYGG	1 cut(s)	76
BstF5I	GGATG	6 cut(s)	546, 681, 749, 1101, 1603, 1819
BstFNI	CGCG	2 cut(s)	99, 115
BstH2I	RGCGCY	1 cut(s)	1438
BstHHI	GCGC	3 cut(s)	115, 1437, 1446
BstKTI	GATC	8 cut(s)	265, 425, 629, 1271, 1348, 1738, 1742, 1818
BstMAI	GTCTC	4 cut(s)	287, 376, 1106, 1693
BstMBI	GATC	8 cut(s)	262, 422, 626, 1268, 1345, 1735, 1739, 1815
BstNI	CCWGG	9 cut(s)	50, 558, 741, 755, 779, 1209, 1503, 1550, 1637
BstNSI	RCATGY	1 cut(s)	1634
BstSFI	CTRYAG	2 cut(s)	1106, 1452
BstUI	CGCG	2 cut(s)	99, 115
BstV1I	GCAGC	7 cut(s)	413, 466, 851, 1106, 1438, 1466, 1657
BstV2I	GAAGAC	3 cut(s)	46, 166, 1329
BstX2I	RGATCY	3 cut(s)	626, 1345, 1815
BstXI	CCANNNNNNTGG	1 cut(s)	711
BstYI	RGATCY	3 cut(s)	626, 1345, 1815
Bsu15I	ATCGAT	1 cut(s)	1738
BsuI	GTATCC	1 cut(s)	554
BsuRI	GGCC	4 cut(s)	75, 87, 135, 1640
BsuTUI	ATCGAT	1 cut(s)	1738
BtgI	CCRYGG	1 cut(s)	76
BtrI	CACGTC	1 cut(s)	148
BtsCI	GGATG	6 cut(s)	546, 681, 749, 1101, 1603, 1819
BtsIMutI	CAGTG	4 cut(s)	532, 876, 1018, 1317
BveI	ACCTGC	1 cut(s)	1837
Cac8I	GCNNGC	9 cut(s)	133, 394, 576, 705, 709, 807, 1041, 1579, 1650
CaiI	CAGNNNCTG	2 cut(s)	407, 845
CfoI	GCGC	3 cut(s)	115, 1437, 1446
Cfr10I	RCCGGY	2 cut(s)	71, 131
Cfr13I	GGNCC	1 cut(s)	1639
ClaI	ATCGAT	1 cut(s)	1738
CseI	GACGC	3 cut(s)	24, 88, 831
CsiI	ACCWGGT	1 cut(s)	48
Csp6I	GTAC	3 cut(s)	599, 920, 1205
CspCI	CAANNNNNGTGG	2 cut(s)	676, 711
CviAII	CATG	8 cut(s)	398, 1059, 1314, 1340, 1352, 1583, 1631, 1732
CviQI	GTAC	3 cut(s)	599, 920, 1205
DdeI	CTNAG	2 cut(s)	1148, 1428
DpnI	GATC	8 cut(s)	264, 424, 628, 1270, 1347, 1737, 1741, 1817
DpnII	GATC	8 cut(s)	262, 422, 626, 1268, 1345, 1735, 1739, 1815
EaeI	YGGCCR	3 cut(s)	73, 85, 133
Eam1104I	CTCTTC	6 cut(s)	9, 209, 720, 1289, 1376, 1469
EarI	CTCTTC	6 cut(s)	9, 209, 720, 1289, 1376, 1469
EciI	GGCGGA	1 cut(s)	539
Ecl136II	GAGCTC	2 cut(s)	161, 1299
Eco130I	CCWWGG	1 cut(s)	276
Eco24I	GRGCYC	2 cut(s)	163, 1301
Eco31I	GGTCTC	1 cut(s)	376
Eco53kI	GAGCTC	2 cut(s)	161, 1299
Eco57I	CTGAAG	2 cut(s)	427, 1341
Eco88I	CYCGRG	1 cut(s)	309
EcoICRI	GAGCTC	2 cut(s)	161, 1299
EcoRI	GAATTC	1 cut(s)	417
EcoRII	CCWGG	9 cut(s)	48, 556, 739, 753, 777, 1207, 1501, 1548, 1635
EcoT14I	CCWWGG	1 cut(s)	276
EcoT22I	ATGCAT	1 cut(s)	1138
EcoT38I	GRGCYC	2 cut(s)	163, 1301
ErhI	CCWWGG	1 cut(s)	276
FaeI	CATG	8 cut(s)	401, 1062, 1317, 1343, 1355, 1586, 1634, 1735
FalI	AAGNNNNNCTT	2 cut(s)	1789, 1821
FaqI	GGGAC	2 cut(s)	464, 1016
FatI	CATG	8 cut(s)	397, 1058, 1313, 1339, 1351, 1582, 1630, 1731
FauI	CCCGC	1 cut(s)	638
FauNDI	CATATG	3 cut(s)	1693, 1785, 1839
FokI	GGATG	6 cut(s)	533, 668, 756, 1088, 1590, 1806
FriOI	GRGCYC	2 cut(s)	163, 1301
FspBI	CTAG	3 cut(s)	605, 677, 1397
GlaI	GCGC	3 cut(s)	114, 1436, 1445
GsuI	CTGGAG	2 cut(s)	147, 504
HaeII	RGCGCY	1 cut(s)	1438
HaeIII	GGCC	4 cut(s)	75, 87, 135, 1640
HapII	CCGG	5 cut(s)	72, 132, 156, 1438, 1642
HgaI	GACGC	3 cut(s)	24, 88, 831
HhaI	GCGC	3 cut(s)	115, 1437, 1446
Hin1I	GRCGYC	1 cut(s)	35
Hin1II	CATG	8 cut(s)	401, 1062, 1317, 1343, 1355, 1586, 1634, 1735
Hin6I	GCGC	3 cut(s)	113, 1435, 1444
HinP1I	GCGC	3 cut(s)	113, 1435, 1444
HindIII	AAGCTT	1 cut(s)	803
HinfI	GANTC	5 cut(s)	124, 187, 1333, 1400, 1461
HpaII	CCGG	5 cut(s)	72, 132, 156, 1438, 1642
HphI	GGTGA	6 cut(s)	61, 145, 427, 652, 1097, 1263
Hpy166II	GTNNAC	4 cut(s)	145, 698, 1256, 1613
Hpy188III	TCNNGA	8 cut(s)	164, 224, 322, 952, 1229, 1330, 1542, 1624
Hpy8I	GTNNAC	4 cut(s)	145, 698, 1256, 1613
Hpy99I	CGWCG	4 cut(s)	40, 104, 107, 152
HpyAV	CCTTC	5 cut(s)	17, 715, 1061, 1649, 1785
HpyCH4III	ACNGT	7 cut(s)	230, 259, 536, 851, 880, 1509, 1715
HpyCH4IV	ACGT	4 cut(s)	66, 147, 1515, 1724
HpyF3I	CTNAG	2 cut(s)	1148, 1428
HpySE526I	ACGT	4 cut(s)	66, 147, 1515, 1724
Hsp92I	GRCGYC	1 cut(s)	35
Hsp92II	CATG	8 cut(s)	401, 1062, 1317, 1343, 1355, 1586, 1634, 1735
HspAI	GCGC	3 cut(s)	113, 1435, 1444
KpnI	GGTACC	1 cut(s)	1208
KroI	GCCGGC	1 cut(s)	131
KroNI	GCCGGC	1 cut(s)	133
Kzo9I	GATC	8 cut(s)	262, 422, 626, 1268, 1345, 1735, 1739, 1815
LguI	GCTCTTC	2 cut(s)	1289, 1376
LmnI	GCTCC	6 cut(s)	158, 166, 233, 781, 1304, 1441
Lsp1109I	GCAGC	7 cut(s)	413, 466, 851, 1106, 1438, 1466, 1657
LweI	GCATC	6 cut(s)	238, 400, 805, 1145, 1162, 1551
MabI	ACCWGGT	1 cut(s)	48
MaeI	CTAG	3 cut(s)	605, 677, 1397
MaeII	ACGT	4 cut(s)	66, 147, 1515, 1724
MaeIII	GTNAC	6 cut(s)	67, 151, 433, 670, 903, 1016
MalI	GATC	8 cut(s)	264, 424, 628, 1270, 1347, 1737, 1741, 1817
MboI	GATC	8 cut(s)	262, 422, 626, 1268, 1345, 1735, 1739, 1815
MflI	RGATCY	3 cut(s)	626, 1345, 1815
MhlI	GDGCHC	3 cut(s)	163, 1301, 1501
MlyI	GAGTC	1 cut(s)	1455
MmeI	TCCRAC	1 cut(s)	1491
Mph1103I	ATGCAT	1 cut(s)	1138
MroNI	GCCGGC	1 cut(s)	131
MseI	TTAA	2 cut(s)	254, 1706
MspA1I	CMGCKG	3 cut(s)	299, 404, 1457
MspI	CCGG	5 cut(s)	72, 132, 156, 1438, 1642
MvaI	CCWGG	9 cut(s)	50, 558, 741, 755, 779, 1209, 1503, 1550, 1637
MvnI	CGCG	2 cut(s)	99, 115
NaeI	GCCGGC	1 cut(s)	133
NciI	CCSGG	2 cut(s)	1439, 1642
NdeI	CATATG	3 cut(s)	1693, 1785, 1839
NdeII	GATC	8 cut(s)	262, 422, 626, 1268, 1345, 1735, 1739, 1815
NgoMIV	GCCGGC	1 cut(s)	131
NlaIII	CATG	8 cut(s)	401, 1062, 1317, 1343, 1355, 1586, 1634, 1735
NlaIV	GGNNCC	3 cut(s)	119, 306, 1206
NmuCI	GTSAC	4 cut(s)	67, 151, 433, 1016
NsiI	ATGCAT	1 cut(s)	1138
NspI	RCATGY	1 cut(s)	1634
NspV	TTCGAA	1 cut(s)	211
PaqCI	CACCTGC	1 cut(s)	1837
PciI	ACATGT	1 cut(s)	1630
PciSI	GCTCTTC	2 cut(s)	1289, 1376
PcsI	WCGNNNNNNNCGW	5 cut(s)	18, 63, 96, 135, 144
PdiI	GCCGGC	1 cut(s)	133
PfeI	GAWTC	4 cut(s)	124, 187, 1333, 1400
PflFI	GACNNNGTC	1 cut(s)	170
PleI	GAGTC	1 cut(s)	1455
PpsI	GAGTC	1 cut(s)	1455
PscI	ACATGT	1 cut(s)	1630
Psp124BI	GAGCTC	2 cut(s)	163, 1301
Psp1406I	AACGTT	1 cut(s)	1724
Psp6I	CCWGG	9 cut(s)	48, 556, 739, 753, 777, 1207, 1501, 1548, 1635
PspGI	CCWGG	9 cut(s)	48, 556, 739, 753, 777, 1207, 1501, 1548, 1635
PspN4I	GGNNCC	3 cut(s)	119, 306, 1206
PspPI	GGNCC	1 cut(s)	1639
PstI	CTGCAG	2 cut(s)	1110, 1456
PstNI	CAGNNNCTG	2 cut(s)	407, 845
PsuI	RGATCY	3 cut(s)	626, 1345, 1815
PsyI	GACNNNGTC	1 cut(s)	170
PvuII	CAGCTG	2 cut(s)	299, 1457
RsaI	GTAC	3 cut(s)	600, 921, 1206
RsaNI	GTAC	3 cut(s)	599, 920, 1205
SacI	GAGCTC	2 cut(s)	163, 1301
SapI	GCTCTTC	2 cut(s)	1289, 1376
SaqAI	TTAA	2 cut(s)	254, 1706
Sau3AI	GATC	8 cut(s)	262, 422, 626, 1268, 1345, 1735, 1739, 1815
Sau96I	GGNCC	1 cut(s)	1639
SbfI	CCTGCAGG	1 cut(s)	1110
SchI	GAGTC	1 cut(s)	1455
SdaI	CCTGCAGG	1 cut(s)	1110
SduI	GDGCHC	3 cut(s)	163, 1301, 1501
SexAI	ACCWGGT	1 cut(s)	48
SfaNI	GCATC	6 cut(s)	238, 400, 805, 1145, 1162, 1551
SfcI	CTRYAG	2 cut(s)	1106, 1452
SfuI	TTCGAA	1 cut(s)	211
SmlI	CTYRAG	3 cut(s)	952, 965, 1034
SmoI	CTYRAG	3 cut(s)	952, 965, 1034
Sse8387I	CCTGCAGG	1 cut(s)	1110
SsiI	CCGC	6 cut(s)	115, 404, 550, 631, 1247, 1834
SspMI	CTAG	3 cut(s)	605, 677, 1397
SstI	GAGCTC	2 cut(s)	163, 1301
StyI	CCWWGG	1 cut(s)	276
TaaI	ACNGT	7 cut(s)	230, 259, 536, 851, 880, 1509, 1715
TaiI	ACGT	4 cut(s)	69, 150, 1518, 1727
TaqI	TCGA	6 cut(s)	38, 105, 211, 421, 1329, 1738
TauI	GCSGC	3 cut(s)	118, 407, 1837
TfiI	GAWTC	4 cut(s)	124, 187, 1333, 1400
Tru1I	TTAA	2 cut(s)	254, 1706
Tru9I	TTAA	2 cut(s)	254, 1706
TscAI	CASTG	4 cut(s)	539, 883, 1025, 1324
TseFI	GTSAC	4 cut(s)	67, 151, 433, 1016
TseI	GCWGC	7 cut(s)	401, 479, 839, 1094, 1451, 1454, 1645
Tsp45I	GTSAC	4 cut(s)	67, 151, 433, 1016
TspDTI	ATGAA	7 cut(s)	196, 787, 954, 1080, 1322, 1328, 1340
TspGWI	ACGGA	5 cut(s)	344, 572, 777, 1739, 1781
TspRI	CASTG	4 cut(s)	539, 883, 1025, 1324
Tth111I	GACNNNGTC	1 cut(s)	170
XapI	RAATTY	4 cut(s)	417, 715, 793, 1482
XceI	RCATGY	1 cut(s)	1634
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1826
XspI	CTAG	3 cut(s)	605, 677, 1397
Zsp2I	ATGCAT	1 cut(s)	1138

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.