Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0006249

Physical Location & Seq

Genomic Coordinates Forward (+)

8661456 .. 8669143

Gene Structure 7688 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom08g10310.12

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2874 bp

ATGAGGATTGACGAAGAGGGCGAAGGAGTGTCGGCGTCCAGGAACCACCTGGTTTTTGCCTACTACGTCACCGGTCACGGCTTCGGCCACGCCACCCGAGTCGTCGAGGTTGCGCGGCACCTGATTCTCGCCGGCCACGATGTGCACGTCGTCACCGGAGCTCCTGACTTCGTTTTCACTTCCGAGATACAATCGCCTCGCCTCTTCATCCGCAAGGTTCTTCTGGACTGTGGAGCTGTGCAAGCAGATGCTTTAACAGTCGATCGTCTTGCTTCCTTAGCTAAGTATTCTGAGACAGCTGTGGCGCCTCGGGCTTCAATCTTGAAAACGGAAGTGGAGTGGCTAACCTCCATCAAGGCTGACCTAGTGGTCTCAGATGTTGTTCCTGTTGCATGCCGTGCAGCCGCTGATGCTGGAATTCGCTCTGTTTGTGTCACTAACTTTAGTTGGGACTTCATCTATGCAGAATATGTCATGGCTGCTGGAAGTAATCATCGTTCAATCGTTTGGCAGATAGCAGAAGATTATTCTCACTGCGAGTTCCTCATCCGCCTCCCAGGATACTGCCCAATGCCTGCTTTCCGTGATGCAGTTGATGTACCTCTAGTTGTGAGGAGGTTTCGCAGATCCCGCAAAGAGGTGAGGGAGGAGCTTGGAATTGGAGACGATGTAAAACTAGTCATCCTCAACTTTGGTGGACAGCCAGCAGGCTGGAAGTTGAAGGAAGAGTTTTTGCCTCCTGGATGGCTGTGCCTGGTTTGTGGTGGTTCTGACACCCAGGAACTTCCACCAAATTTCATAAAACTGGCAAAAGATGCTTATACACCTGATTTTATGGCAGCATCTGACTGTATGCTTGGAAAAATTGGATATGGCACTGTGAGTGAAGCTCTTTCATACAAGTTACCATTTGTCTTTGTACGCAGAGATTATTTCAATGAAGAACCTTTCTTGAGAAATATGCTTGAGTATTATCAAGGTGGCGTTGAGATGATTAGGAGGGACTTGCTCACTGGTCATTGGAAACCTTACCTTGAGCGTGCAATCAGTTTGAAACCATGCTATGAAGGCGGCATCAATGGTGGTGAGGTGGCAGCTCACATCCTGCAAGAGACGGCTATTGGGAAAAACTACGCTTCAGATAAGCTAAGTGGGGCAAGAAGATTGCGTGATGCCATAATTCTTGGGTATCAACTTCAAAGGGCACCTGGACGAGATATGGCAATTCCTGAATGGTATGCAAATGCTGAAAGTGAACTTGGAATTGGATCACCTACTTGTGGAATGAGCGAAAATGGCTCCCTAATGTACTCATGCACTGAAGATTTTGAGATTCTTCATGGAGATCTTCATGGTCTTTCAGATACGATGACTTTTTTGAAGAGCCTGGCGGAACTAGATTCTGTTTATGACTCTGAAAAAACTACTGAGAAGCGCCGGGAGCGCAAGGCTGCAGCTGGACTCTTCAACTGGGAGGAAGAAATTTTTGTAGCTAGAGCACCTGGACGGTTAGACGTAATGGGAGGGATTGCTGACTATTCAGGAAGCCTAGTCTTGCAGATGCCCATAAAAGAAGCCTGCCATGTTGCTGTTCAACGGAATCATCCAAGTAAACATAGGCTCTGGAAACATGCCCTGGCCCGGCAGCAGGGACAAAACCCGACGCCTGTCCTGCAAATTGTCTCATATGGTTCAGAGTTAAGCAACCGTAGCCCAACGTTTGACATGGATCGATCTGATTTTATGGATGGAGATAAGCCAATGTCATATGAGAATGCAAAGAAATACTTTTCACAAGATCCATCCCAAAAGTGGGCAGCATATGTTGCAGGTGTCATTCTGGTTTTAATGACAGAACTAGGTGTACGTTTTGAGGATAGCATCAGTTTGCTGGTTTCCTCCTCCGTCCCAGAAGGCAAAGGTGTCTCTTCTTCTGCTTCTGTGGAAGTCGCTACCATGTCTGCCATAGCTGCTGCCCATGGATTAAGCATCAGTCCCAGAGATCTTGCTTTGCTTTGCCAAAAGGTGGAGAATCATATTGTTGGAGCCCCATGCGGTGTCATGGACCAGATGACATCTGCATGTGGCGAAGCAAACAAGCTTCTTGCAATGGTGTGCCAGCCTGCTGAGGTTCTTGGACTTGTAGAAATTCCTGGCCATGTCAGATTTTGGGGAATTGATTCAGGAATAAGACACAGTGTCGGAGGTGCAGATTATGGATCTGTTCGAATAGGTGCCTTTATGGGTCGGAAGATGATAAAGTGTGCAGCTTCTACGATTTTGTCCCGGTCATCATCAACTGCAAATGGGACAAACGGTGATGAGTTGGAGGATGATGGTTTTGAACTACTTGAAGCTGAAGCCTCATTAAATTACTTGTGCAGCCTGTCACCTCACAGATATGAGGCTCTTTATGTTAAGGTGCTTCCTGAGACTATACTTGGTGAAACTTTTCTTGAGAAGTATGATGATCAGAACGATCCAGTTACAGTAATTGATCCAAAATATGATCAGCTTACAGCTCTTGGAGAATTACTGTATCAGTGCCACTACAGCTATAGTGCTTGCGGACTTGGCTCCGACGGAACAAACCGGCTTGTACGGTTGGTACAAGCGATGCAAAATGCTAAATCGTCTAAATCCGACGATGGGACATTATACGGAGCCAAGATTACAGGCGGAGGTTCTGGCGGAACGGTTTGTGTAGTCGGAAGGAATTCTCTGCAGAGCAGCCAACAAATTTTGGAGATTCAGCAGAGGTACAAAGATGCAACAGGGTATCTGCCATTTATTTTCGAGGGCTCGTCGCCCGGTGCCGGAAAATTCGGGTATCTAAGAATACGCCGCCGCGTCTCCCTCGATCCAAATGAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005911 GO:0005975 GO:0006793 GO:0006796 GO:0008150 GO:0008152 GO:0009506 GO:0009702 GO:0009987 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019200 GO:0030054 GO:0044237 GO:0044238 GO:0044262 GO:0044424 GO:0044444 GO:0044464 GO:0046835 GO:0055044 GO:0071704

KEGG Pathways

Metabolic & Signaling

ko00520 ko01100 map00520 map01100

Pfam Domains

Protein Families

GHMP_kinases_C GHMP_kinases_N GalKase_gal_bdg Glyco_trans_1_3

Protein Analysis

958

Amino Acids

104.95

Weight (kDa)

5.57

Isoelectric Point (pI)

44.48

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006249)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G42850 AT3G42850 AT4G16130
fragaria_vesca	FvH4_2g36460 FvH4_2g36460 FvH4_2g36460
malus_domestica	MD08G1124400.v1.1 MD15G1103100.v1.1
prunus_persica	Prupe.1G456000_v2.0.a1 Prupe.1G456000_v2.0.a1 Prupe.1G456000_v2.0.a1 Prupe.1G456000_v2.0.a1 Prupe.1G456000_v2.0.a1 Prupe.1G456000_v2.0.a1 Prupe.1G456000_v2.0.a1
pyrus_communis	pycom08g10310 pycom15g09400
rosa_chinensis	RchiOBHm_Chr6g0305421
rosa_laevigata	RLG00000010892
rosa_multiflora	Rmu_sc0002782.1_g000020
rosa_roxburghii	Rroxscaffold_7G00162820
rosa_rugosa	Rorug06G0340200
rosa_samantha	Rh6AG452200 Rh6BG449500 Rh6CG466000 Rh6DG452700
rosa_wichuraiana	Rw6G039400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1820
AasI	GACNNNNNNGTC	1 cut(s)	368
Acc36I	ACCTGC	1 cut(s)	1820
AccB1I	GGYRCC	5 cut(s)	117, 304, 1204, 2234, 2813
AccB7I	CCANNNNNTGG	1 cut(s)	2026
AccII	CGCG	2 cut(s)	115, 2850
AclI	AACGTT	1 cut(s)	1718
AclWI	GGATC	8 cut(s)	621, 1276, 1737, 1793, 2227, 2474, 2492, 2855
AcoI	YGGCCR	3 cut(s)	85, 133, 2155
AcsI	RAATTY	7 cut(s)	417, 793, 1482, 2148, 2716, 2739, 2822
AcuI	CTGAAG	3 cut(s)	1122, 1341, 2379
AcyI	GRCGYC	3 cut(s)	35, 305, 1664
AdeI	CACNNNGTG	1 cut(s)	142
AfaI	GTAC	7 cut(s)	600, 921, 1310, 1866, 2601, 2610, 2762
AfiI	CCNNNNNNNGG	9 cut(s)	637, 1280, 1641, 1648, 1812, 1813, 2026, 2649, 2816
AgeI	ACCGGT	1 cut(s)	71
AhdI	GACNNNNNGTC	1 cut(s)	2198
AhlI	ACTAGT	1 cut(s)	676
AjiI	CACGTC	1 cut(s)	148
AjuI	GAANNNNNNNTTGG	4 cut(s)	1242, 1248, 1274, 1280
Alw21I	GWGCWC	3 cut(s)	147, 163, 1501
Alw26I	GTCTC	8 cut(s)	287, 376, 657, 1106, 1687, 1930, 2426, 2857
Alw44I	GTGCAC	1 cut(s)	143
AlwI	GGATC	8 cut(s)	621, 1276, 1737, 1793, 2227, 2474, 2492, 2855
AlwNI	CAGNNNCTG	2 cut(s)	407, 845
Ama87I	CYCGRG	2 cut(s)	96, 309
AoxI	GGCC	4 cut(s)	85, 133, 1638, 2155
ApaLI	GTGCAC	1 cut(s)	143
ApoI	RAATTY	7 cut(s)	417, 793, 1482, 2148, 2716, 2739, 2822
AsiGI	ACCGGT	1 cut(s)	71
Asp700I	GAANNNNTTC	3 cut(s)	2179, 2451, 2716
AspLEI	GCGC	4 cut(s)	115, 307, 1437, 1446
AspS9I	GGNCC	2 cut(s)	1639, 2065
AsuC2I	CCSGG	4 cut(s)	1439, 1642, 2287, 2811
AsuHPI	GGTGA	8 cut(s)	61, 145, 652, 1097, 1263, 2330, 2382, 2456
AsuII	TTCGAA	1 cut(s)	2227
AvaI	CYCGRG	2 cut(s)	96, 309
AvaII	GGWCC	1 cut(s)	2065
BaeGI	GKGCMC	2 cut(s)	147, 1207
BalI	TGGCCA	1 cut(s)	2157
BanI	GGYRCC	5 cut(s)	117, 304, 1204, 2234, 2813
BanII	GRGCYC	3 cut(s)	163, 2050, 2804
Bbv12I	GWGCWC	3 cut(s)	147, 163, 1501
BbvCI	CCTCAGC	1 cut(s)	2127
BccI	CCATC	6 cut(s)	359, 738, 1742, 1810, 2330, 2642
BceAI	ACGGC	3 cut(s)	94, 381, 1131
BcgI	CGANNNNNNTGC	2 cut(s)	251, 285
BciVI	GTATCC	1 cut(s)	554
BclI	TGATCA	2 cut(s)	2470, 2509
BcnI	CCSGG	4 cut(s)	1439, 1642, 2287, 2811
BcoDI	GTCTC	8 cut(s)	287, 376, 657, 1106, 1687, 1930, 2426, 2857
BcuI	ACTAGT	1 cut(s)	676
BfaI	CTAG	7 cut(s)	365, 605, 677, 1397, 1494, 1550, 1859
BfmI	CTRYAG	4 cut(s)	1452, 2551, 2557, 2723
BfoI	RGCGCY	2 cut(s)	308, 1438
BfuAI	ACCTGC	1 cut(s)	1820
BfuI	GTATCC	1 cut(s)	554
BglII	AGATCT	2 cut(s)	1345, 2002
Bme18I	GGWCC	1 cut(s)	2065
BmeRI	GACNNNNNGTC	1 cut(s)	2198
BmeT110I	CYCGRG	2 cut(s)	96, 309
BmgBI	CACGTC	1 cut(s)	148
BmgT120I	GGNCC	2 cut(s)	1639, 2065
BmrI	ACTGGG	1 cut(s)	1480
BmuI	ACTGGG	1 cut(s)	1480
BoxI	GACNNNNGTC	1 cut(s)	1667
BplI	GAGNNNNNCTC	2 cut(s)	874, 906
Bpu10I	CCTNAGC	2 cut(s)	277, 2127
Bpu14I	TTCGAA	1 cut(s)	2227
BpuEI	CTTGAG	4 cut(s)	973, 986, 1055, 2477
BpuMI	CCSGG	4 cut(s)	1439, 1642, 2287, 2811
Bsa29I	ATCGAT	1 cut(s)	1732
BsaHI	GRCGYC	3 cut(s)	35, 305, 1664
BsaI	GGTCTC	1 cut(s)	376
BsaJI	CCNNGG	5 cut(s)	308, 556, 777, 1635, 1978
BsaWI	WCCGGW	2 cut(s)	71, 155
BsaXI	ACNNNNNCTCC	4 cut(s)	145, 175, 654, 684
Bsc4I	CCNNNNNNNGG	9 cut(s)	637, 1280, 1641, 1648, 1812, 1813, 2026, 2649, 2816
Bse118I	RCCGGY	3 cut(s)	71, 131, 2592
Bse1I	ACTGG	4 cut(s)	810, 1018, 1475, 2483
Bse3DI	GCAATG	1 cut(s)	2115
BseCI	ATCGAT	1 cut(s)	1732
BseDI	CCNNGG	5 cut(s)	308, 556, 777, 1635, 1978
BseGI	GGATG	9 cut(s)	207, 546, 681, 749, 1101, 1603, 1753, 1802, 2338
BseLI	CCNNNNNNNGG	9 cut(s)	637, 1280, 1641, 1648, 1812, 1813, 2026, 2649, 2816
BseMI	GCAATG	1 cut(s)	2115
BseMII	CTCAG	5 cut(s)	282, 387, 1419, 2118, 2421
BseNI	ACTGG	4 cut(s)	810, 1018, 1475, 2483
BseRI	GAGGAG	3 cut(s)	628, 662, 1891
BseSI	GKGCMC	2 cut(s)	147, 1207
BsgI	GTGCAG	4 cut(s)	420, 2229, 2286, 2401
Bsh1236I	CGCG	2 cut(s)	115, 2850
Bsh1285I	CGRYCG	1 cut(s)	265
BshFI	GGCC	4 cut(s)	87, 135, 1640, 2157
BshNI	GGYRCC	5 cut(s)	117, 304, 1204, 2234, 2813
BshTI	ACCGGT	1 cut(s)	71
BshVI	ATCGAT	1 cut(s)	1732
BsiEI	CGRYCG	1 cut(s)	265
BsiHKAI	GWGCWC	3 cut(s)	147, 163, 1501
BsiHKCI	CYCGRG	2 cut(s)	96, 309
BsiSI	CCGG	9 cut(s)	72, 132, 156, 1438, 1642, 2287, 2593, 2811, 2817
BslFI	GGGAC	8 cut(s)	464, 1016, 1665, 1892, 1980, 2269, 2323, 2665
BslI	CCNNNNNNNGG	9 cut(s)	637, 1280, 1641, 1648, 1812, 1813, 2026, 2649, 2816
BsmAI	GTCTC	8 cut(s)	287, 376, 657, 1106, 1687, 1930, 2426, 2857
BsmBI	CGTCTC	3 cut(s)	657, 1106, 2857
BsmFI	GGGAC	8 cut(s)	464, 1016, 1665, 1892, 1980, 2269, 2323, 2665
BsmI	GAATGC	1 cut(s)	1780
BsnI	GGCC	4 cut(s)	87, 135, 1640, 2157
Bso31I	GGTCTC	1 cut(s)	376
BsoBI	CYCGRG	2 cut(s)	96, 309
Bsp119I	TTCGAA	1 cut(s)	2227
Bsp1286I	GDGCHC	6 cut(s)	147, 163, 1207, 1501, 2050, 2804
Bsp19I	CCATGG	1 cut(s)	1978
BspANI	GGCC	4 cut(s)	87, 135, 1640, 2157
BspCNI	CTCAG	5 cut(s)	283, 386, 1420, 2119, 2422
BspDI	ATCGAT	1 cut(s)	1732
BspFNI	CGCG	2 cut(s)	115, 2850
BspMAI	CTGCAG	2 cut(s)	1456, 2727
BspMI	ACCTGC	1 cut(s)	1820
BspPI	GGATC	8 cut(s)	621, 1276, 1737, 1793, 2227, 2474, 2492, 2855
BspQI	GCTCTTC	1 cut(s)	1376
BspT104I	TTCGAA	1 cut(s)	2227
BspT107I	GGYRCC	5 cut(s)	117, 304, 1204, 2234, 2813
BspTNI	GGTCTC	1 cut(s)	376
BsrDI	GCAATG	1 cut(s)	2115
BsrFI	RCCGGY	3 cut(s)	71, 131, 2592
BsrI	ACTGG	4 cut(s)	810, 1018, 1475, 2483
BssAI	RCCGGY	3 cut(s)	71, 131, 2592
BssECI	CCNNGG	5 cut(s)	308, 556, 777, 1635, 1978
BssNI	GRCGYC	3 cut(s)	35, 305, 1664
BssT1I	CCWWGG	1 cut(s)	1978
Bst6I	CTCTTC	6 cut(s)	9, 209, 720, 1376, 1469, 1933
BstACI	GRCGYC	3 cut(s)	35, 305, 1664
BstAPI	GCANNNNNTGC	3 cut(s)	398, 815, 1826
BstBI	TTCGAA	1 cut(s)	2227
BstDEI	CTNAG	9 cut(s)	277, 282, 291, 373, 1148, 1428, 2127, 2430, 2834
BstDSI	CCRYGG	1 cut(s)	1978
BstF5I	GGATG	9 cut(s)	207, 546, 681, 749, 1101, 1603, 1753, 1802, 2338
BstFNI	CGCG	2 cut(s)	115, 2850
BstH2I	RGCGCY	2 cut(s)	308, 1438
BstHHI	GCGC	4 cut(s)	115, 307, 1437, 1446
BstMAI	GTCTC	8 cut(s)	287, 376, 657, 1106, 1687, 1930, 2426, 2857
BstMCI	CGRYCG	1 cut(s)	265
BstNSI	RCATGY	3 cut(s)	396, 1634, 2085
BstPAI	GACNNNNGTC	1 cut(s)	1667
BstSFI	CTRYAG	4 cut(s)	1452, 2551, 2557, 2723
BstSLI	GKGCMC	2 cut(s)	147, 1207
BstUI	CGCG	2 cut(s)	115, 2850
BstX2I	RGATCY	5 cut(s)	626, 1345, 1798, 2002, 2219
BstXI	CCANNNNNNTGG	1 cut(s)	711
BstYI	RGATCY	5 cut(s)	626, 1345, 1798, 2002, 2219
Bsu15I	ATCGAT	1 cut(s)	1732
BsuI	GTATCC	1 cut(s)	554
BsuRI	GGCC	4 cut(s)	87, 135, 1640, 2157
BsuTUI	ATCGAT	1 cut(s)	1732
BtgI	CCRYGG	1 cut(s)	1978
BtgZI	GCGATG	1 cut(s)	2630
BtrI	CACGTC	1 cut(s)	148
BtsCI	GGATG	9 cut(s)	207, 546, 681, 749, 1101, 1603, 1753, 1802, 2338
BtsI	GCAGTG	1 cut(s)	532
BtsIMutI	CAGTG	6 cut(s)	532, 876, 1011, 1317, 2203, 2549
BveI	ACCTGC	1 cut(s)	1820
CaiI	CAGNNNCTG	2 cut(s)	407, 845
CfoI	GCGC	4 cut(s)	115, 307, 1437, 1446
Cfr10I	RCCGGY	3 cut(s)	71, 131, 2592
Cfr13I	GGNCC	2 cut(s)	1639, 2065
ClaI	ATCGAT	1 cut(s)	1732
CseI	GACGC	3 cut(s)	24, 1672, 2839
CsiI	ACCWGGT	1 cut(s)	48
Csp6I	GTAC	7 cut(s)	599, 920, 1309, 1865, 2600, 2609, 2761
CspAI	ACCGGT	1 cut(s)	71
CspCI	CAANNNNNGTGG	2 cut(s)	676, 711
CviQI	GTAC	7 cut(s)	599, 920, 1309, 1865, 2600, 2609, 2761
DdeI	CTNAG	9 cut(s)	277, 282, 291, 373, 1148, 1428, 2127, 2430, 2834
DinI	GGCGCC	1 cut(s)	306
DraIII	CACNNNGTG	1 cut(s)	142
DrdI	GACNNNNNNGTC	1 cut(s)	368
DriI	GACNNNNNGTC	1 cut(s)	2198
DseDI	GACNNNNNNGTC	1 cut(s)	368
EaeI	YGGCCR	3 cut(s)	85, 133, 2155
Eam1104I	CTCTTC	6 cut(s)	9, 209, 720, 1376, 1469, 1933
Eam1105I	GACNNNNNGTC	1 cut(s)	2198
EarI	CTCTTC	6 cut(s)	9, 209, 720, 1376, 1469, 1933
EciI	GGCGGA	4 cut(s)	539, 1406, 2694, 2706
Ecl136II	GAGCTC	1 cut(s)	161
Eco130I	CCWWGG	1 cut(s)	1978
Eco24I	GRGCYC	3 cut(s)	163, 2050, 2804
Eco31I	GGTCTC	1 cut(s)	376
Eco47I	GGWCC	1 cut(s)	2065
Eco53kI	GAGCTC	1 cut(s)	161
Eco57I	CTGAAG	3 cut(s)	1122, 1341, 2379
Eco88I	CYCGRG	2 cut(s)	96, 309
EcoICRI	GAGCTC	1 cut(s)	161
EcoRI	GAATTC	2 cut(s)	417, 2716
EcoT14I	CCWWGG	1 cut(s)	1978
EcoT38I	GRGCYC	3 cut(s)	163, 2050, 2804
EgeI	GGCGCC	1 cut(s)	306
EheI	GGCGCC	1 cut(s)	306
ErhI	CCWWGG	1 cut(s)	1978
Esp3I	CGTCTC	3 cut(s)	657, 1106, 2857
FalI	AAGNNNNNCTT	2 cut(s)	1772, 1804
FaqI	GGGAC	8 cut(s)	464, 1016, 1665, 1892, 1980, 2269, 2323, 2665
FauI	CCCGC	1 cut(s)	638
FauNDI	CATATG	3 cut(s)	1687, 1768, 1822
FbaI	TGATCA	2 cut(s)	2470, 2509
FokI	GGATG	9 cut(s)	194, 533, 668, 756, 1088, 1590, 1760, 1789, 2345
FriOI	GRGCYC	3 cut(s)	163, 2050, 2804
FspBI	CTAG	7 cut(s)	365, 605, 677, 1397, 1494, 1550, 1859
GlaI	GCGC	4 cut(s)	114, 306, 1436, 1445
HaeII	RGCGCY	2 cut(s)	308, 1438
HaeIII	GGCC	4 cut(s)	87, 135, 1640, 2157
HapII	CCGG	9 cut(s)	72, 132, 156, 1438, 1642, 2287, 2593, 2811, 2817
HgaI	GACGC	3 cut(s)	24, 1672, 2839
HhaI	GCGC	4 cut(s)	115, 307, 1437, 1446
Hin1I	GRCGYC	3 cut(s)	35, 305, 1664
Hin6I	GCGC	4 cut(s)	113, 305, 1435, 1444
HinP1I	GCGC	4 cut(s)	113, 305, 1435, 1444
HindIII	AAGCTT	1 cut(s)	2099
HpaII	CCGG	9 cut(s)	72, 132, 156, 1438, 1642, 2287, 2593, 2811, 2817
HphI	GGTGA	8 cut(s)	61, 145, 652, 1097, 1263, 2330, 2382, 2456
Hpy166II	GTNNAC	5 cut(s)	145, 698, 1256, 1613, 1865
Hpy8I	GTNNAC	5 cut(s)	145, 698, 1256, 1613, 1865
Hpy99I	CGWCG	6 cut(s)	107, 152, 1666, 2585, 2648, 2809
HpyAV	CCTTC	5 cut(s)	17, 715, 1061, 1907, 2706
HpyCH4IV	ACGT	5 cut(s)	66, 147, 1515, 1718, 1867
HpyF3I	CTNAG	9 cut(s)	277, 282, 291, 373, 1148, 1428, 2127, 2430, 2834
HpySE526I	ACGT	5 cut(s)	66, 147, 1515, 1718, 1867
Hsp92I	GRCGYC	3 cut(s)	35, 305, 1664
HspAI	GCGC	4 cut(s)	113, 305, 1435, 1444
KasI	GGCGCC	1 cut(s)	304
KroI	GCCGGC	1 cut(s)	131
KroNI	GCCGGC	1 cut(s)	133
Ksp22I	TGATCA	2 cut(s)	2470, 2509
LguI	GCTCTTC	1 cut(s)	1376
LmnI	GCTCC	9 cut(s)	158, 166, 233, 649, 1304, 1441, 2045, 2582, 2663
MabI	ACCWGGT	1 cut(s)	48
MaeI	CTAG	7 cut(s)	365, 605, 677, 1397, 1494, 1550, 1859
MaeII	ACGT	5 cut(s)	66, 147, 1515, 1718, 1867
MaeIII	GTNAC	7 cut(s)	67, 74, 151, 433, 903, 2388, 2485
MflI	RGATCY	5 cut(s)	626, 1345, 1798, 2002, 2219
MhlI	GDGCHC	6 cut(s)	147, 163, 1207, 1501, 2050, 2804
MlsI	TGGCCA	1 cut(s)	2157
MluNI	TGGCCA	1 cut(s)	2157
Mly113I	GGCGCC	1 cut(s)	305
MlyI	GAGTC	3 cut(s)	108, 1406, 1455
MmeI	TCCRAC	7 cut(s)	2023, 2182, 2228, 2307, 2604, 2667, 2689
Mox20I	TGGCCA	1 cut(s)	2157
MroNI	GCCGGC	1 cut(s)	131
MroXI	GAANNNNTTC	3 cut(s)	2179, 2451, 2716
MscI	TGGCCA	1 cut(s)	2157
MseI	TTAA	6 cut(s)	254, 1700, 1847, 1985, 2369, 2418
MslI	CAYNNNNRTG	2 cut(s)	2080, 2400
Msp20I	TGGCCA	1 cut(s)	2157
MspA1I	CMGCKG	3 cut(s)	299, 407, 1457
MspI	CCGG	9 cut(s)	72, 132, 156, 1438, 1642, 2287, 2593, 2811, 2817
Mva1269I	GAATGC	1 cut(s)	1780
MvnI	CGCG	2 cut(s)	115, 2850
NaeI	GCCGGC	1 cut(s)	133
NarI	GGCGCC	1 cut(s)	305
NciI	CCSGG	4 cut(s)	1439, 1642, 2287, 2811
NcoI	CCATGG	1 cut(s)	1978
NdeI	CATATG	3 cut(s)	1687, 1768, 1822
NgoMIV	GCCGGC	1 cut(s)	131
NmuCI	GTSAC	5 cut(s)	67, 74, 151, 433, 2388
NspI	RCATGY	3 cut(s)	396, 1634, 2085
NspV	TTCGAA	1 cut(s)	2227
PaeI	GCATGC	1 cut(s)	396
PaqCI	CACCTGC	1 cut(s)	1820
PciSI	GCTCTTC	1 cut(s)	1376
PcsI	WCGNNNNNNNCGW	3 cut(s)	18, 135, 144
PctI	GAATGC	1 cut(s)	1780
PdiI	GCCGGC	1 cut(s)	133
PdmI	GAANNNNTTC	3 cut(s)	2179, 2451, 2716
PfeI	GAWTC	7 cut(s)	124, 1333, 1400, 1600, 2032, 2180, 2749
PflMI	CCANNNNNTGG	1 cut(s)	2026
PfoI	TCCNGGA	2 cut(s)	38, 739
PinAI	ACCGGT	1 cut(s)	71
Ple19I	CGATCG	1 cut(s)	265
PleI	GAGTC	3 cut(s)	107, 1406, 1455
PluTI	GGCGCC	1 cut(s)	308
PpsI	GAGTC	3 cut(s)	107, 1406, 1455
PshAI	GACNNNNGTC	1 cut(s)	1667
Psp124BI	GAGCTC	1 cut(s)	163
Psp1406I	AACGTT	1 cut(s)	1718
PspPI	GGNCC	2 cut(s)	1639, 2065
PsrI	GAACNNNNNNTAC	4 cut(s)	481, 513, 1848, 1880
PstI	CTGCAG	2 cut(s)	1456, 2727
PstNI	CAGNNNCTG	2 cut(s)	407, 845
PsuI	RGATCY	5 cut(s)	626, 1345, 1798, 2002, 2219
PvuI	CGATCG	1 cut(s)	265
PvuII	CAGCTG	2 cut(s)	299, 1457
RsaI	GTAC	7 cut(s)	600, 921, 1310, 1866, 2601, 2610, 2762
RsaNI	GTAC	7 cut(s)	599, 920, 1309, 1865, 2600, 2609, 2761
RseI	CAYNNNNRTG	2 cut(s)	2080, 2400
SacI	GAGCTC	1 cut(s)	163
SapI	GCTCTTC	1 cut(s)	1376
SaqAI	TTAA	6 cut(s)	254, 1700, 1847, 1985, 2369, 2418
Sau96I	GGNCC	2 cut(s)	1639, 2065
SchI	GAGTC	3 cut(s)	108, 1406, 1455
SduI	GDGCHC	6 cut(s)	147, 163, 1207, 1501, 2050, 2804
SexAI	ACCWGGT	1 cut(s)	48
SfcI	CTRYAG	4 cut(s)	1452, 2551, 2557, 2723
SfoI	GGCGCC	1 cut(s)	306
SfuI	TTCGAA	1 cut(s)	2227
SinI	GGWCC	1 cut(s)	2065
SmiMI	CAYNNNNRTG	2 cut(s)	2080, 2400
SmlI	CTYRAG	4 cut(s)	952, 965, 1034, 2456
SmoI	CTYRAG	4 cut(s)	952, 965, 1034, 2456
SpeI	ACTAGT	1 cut(s)	676
SphI	GCATGC	1 cut(s)	396
SspDI	GGCGCC	1 cut(s)	304
SspMI	CTAG	7 cut(s)	365, 605, 677, 1397, 1494, 1550, 1859
SstI	GAGCTC	1 cut(s)	163
StyI	CCWWGG	1 cut(s)	1978
TaiI	ACGT	5 cut(s)	69, 150, 1518, 1721, 1870
TaqI	TCGA	6 cut(s)	105, 261, 1732, 2227, 2796, 2859
TatI	WGTACW	1 cut(s)	1308
TauI	GCSGC	5 cut(s)	118, 407, 1074, 2847, 2850
TfiI	GAWTC	7 cut(s)	124, 1333, 1400, 1600, 2032, 2180, 2749
Tru1I	TTAA	6 cut(s)	254, 1700, 1847, 1985, 2369, 2418
Tru9I	TTAA	6 cut(s)	254, 1700, 1847, 1985, 2369, 2418
TscAI	CASTG	6 cut(s)	539, 883, 1018, 1324, 2203, 2549
TseFI	GTSAC	5 cut(s)	67, 74, 151, 433, 2388
Tsp45I	GTSAC	5 cut(s)	67, 74, 151, 433, 2388
TspDTI	ATGAA	8 cut(s)	196, 445, 787, 885, 954, 1080, 1328, 1340
TspGWI	ACGGA	6 cut(s)	344, 572, 1612, 1894, 2598, 2676
TspRI	CASTG	6 cut(s)	539, 883, 1018, 1324, 2203, 2549
Van91I	CCANNNNNTGG	1 cut(s)	2026
VneI	GTGCAC	1 cut(s)	143
VpaK11BI	GGWCC	1 cut(s)	2065
XapI	RAATTY	7 cut(s)	417, 793, 1482, 2148, 2716, 2739, 2822
XceI	RCATGY	3 cut(s)	396, 1634, 2085
XcmI	CCANNNNNNNNNTGG	2 cut(s)	46, 1809
XmnI	GAANNNNTTC	3 cut(s)	2179, 2451, 2716
XspI	CTAG	7 cut(s)	365, 605, 677, 1397, 1494, 1550, 1859

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.