AT4G16190

Belongs to the peptidase C1 family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Forward (+)
9171280 .. 9173667
2388 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G16190.1

Sequence Viewer

Length: 1122 bp
ATGGATCGTGTGGTCTTCTTCTTCCTCATCGCAGCTACGTTACTAGCAGGTTCTCTCGGATCTACCGTCATCTCCGGCGAGGTTACCGACGGTTTCGTTAACCCGATCAGGCAAGTCGTCCCGGAGGAGAACGATGAACAACTCCTCAACGCAGAACATCACTTCACTCTATTCAAATCCAAGTACGAGAAGACTTACGCGACTCAGGTAGAGCACGATCATCGGTTCCGTGTCTTCAAAGCTAACCTAAGACGAGCTAGGCGTAACCAGCTTCTAGATCCGTCTGCCGTCCACGGCGTCACGCAGTTCTCAGATCTTACTCCGAAAGAATTCCGCCGCAAGTTTTTAGGACTGAAACGCCGAGGGTTTCGTCTTCCTACTGATACTCAGACGGCGCCTATTCTTCCGACTAGCGATCTTCCGACGGAGTTCGATTGGCGTGAACAAGGAGCCGTCACACCTGTTAAAAACCAGGGTATGTGTGGTTCATGCTGGTCATTTAGTGCGATAGGAGCTCTTGAAGGAGCACATTTTCTAGCCACTAAAGAGCTTGTTAGCCTCAGTGAGCAGCAGCTCGTAGATTGTGACCATGAGTGTGATCCAGCACAAGCCAATTCATGTGATTCTGGTTGCAGTGGAGGACTAATGAACAACGCTTTTGAGTACGCTCTTAAAGCTGGTGGTCTAATGAAGGAAGAGGACTATCCTTATACAGGACGTGACCATACCGCTTGTAAGTTCGACAAGAGCAAGATTGTTGCGAGTGTGTCTAACTTCAGCGTTGTCTCTTCGGATGAAGACCAAATCGCTGCTAATCTAGTCCAGCATGGACCTCTAGCTATTGCTATCAATGCGATGTGGATGCAAACATACATAGGAGGAGTCTCGTGCCCGTATGTATGTTCAAAGAGCCAAGACCATGGAGTGCTCTTGGTTGGATTTGGTTCATCGGGTTATGCACCAATCCGTCTTAAGGAGAAGCCTTATTGGATTATCAAGAACTCGTGGGGAGCGATGTGGGGAGAGCATGGTTACTACAAAATCTGCAGAGGGCCTCATAATATGTGTGGTATGGATACAATGGTATCTACTGTTGCTGCTGTTCATACCTCACCCAAGTAG

Protein Analysis

373

Amino Acids

41.26

Weight (kDa)

6.5

Isoelectric Point (pI)

32.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Inhibitor_I29 PF08246 55 - 111 2.5e-14 Cathepsin propeptide inhibitor domain (I29)
Peptidase_C1 PF00112 140 - 364 1.4e-74 Papain family cysteine protease
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0017078)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G16190
fragaria_vesca FvH4_2g38940
malus_domestica MD08G1021600.v1.1 MD15G1019300.v1.1
prunus_persica Prupe.1G371600_v2.0.a1
pyrus_communis pycom08g01710
rosa_chinensis RchiOBHm_Chr6g0302031
rosa_laevigata RLG00000011201
rosa_roxburghii Rroxscaffold_7G00166170
rosa_rugosa Rorug06G0311100
rosa_samantha Rh6BG478400 Rh6DG424000
rosa_wichuraiana Rw6G036720

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 38
AccB1I GGYRCC 1 cut(s) 394
AccII CGCG 1 cut(s) 200
AciI CCGC 3 cut(s) 334, 337, 729
AclWI GGATC 4 cut(s) 12, 67, 272, 593
AcsI RAATTY 1 cut(s) 329
AcuI CTGAAG 1 cut(s) 760
AcyI GRCGYC 2 cut(s) 297, 395
AfaI GTAC 2 cut(s) 185, 665
AfiI CCNNNNNNNGG 2 cut(s) 713, 973
AflII CTTAAG 1 cut(s) 971
AgsI TTSAA 4 cut(s) 175, 238, 521, 906
AjiI CACGTC 1 cut(s) 719
AjnI CCWGG 1 cut(s) 471
AluBI AGCT 9 cut(s) 35, 242, 257, 271, 515, 550, 574, 677, 839
AluI AGCT 9 cut(s) 35, 242, 257, 271, 515, 550, 574, 677, 839
Alw21I GWGCWC 4 cut(s) 216, 517, 529, 930
Alw26I GTCTC 2 cut(s) 790, 889
AlwI GGATC 4 cut(s) 12, 67, 272, 593
AoxI GGCC 1 cut(s) 1052
ApeKI GCWGC 5 cut(s) 32, 568, 571, 809, 1097
ApoI RAATTY 1 cut(s) 329
Asp700I GAANNNNTTC 1 cut(s) 329
AspLEI GCGC 1 cut(s) 397
AspS9I GGNCC 2 cut(s) 830, 1052
AsuC2I CCSGG 1 cut(s) 122
AsuHPI GGTGA 1 cut(s) 1104
AvaII GGWCC 1 cut(s) 830
BaeGI GKGCMC 1 cut(s) 893
BaeI ACNNNNGTAYC 4 cut(s) 1068, 1068, 1101, 1101
BanI GGYRCC 1 cut(s) 394
BanII GRGCYC 1 cut(s) 517
BauI CACGAG 2 cut(s) 886, 1003
BbsI GAAGAC 5 cut(s) 7, 197, 226, 365, 804
Bbv12I GWGCWC 4 cut(s) 216, 517, 529, 930
BbvI GCAGC 5 cut(s) 44, 580, 583, 796, 1084
BceAI ACGGC 4 cut(s) 272, 310, 408, 437
BcgI CGANNNNNNTGC 4 cut(s) 203, 237, 844, 878
BciT130I CCWGG 1 cut(s) 473
BciVI GTATCC 1 cut(s) 1069
BcnI CCSGG 1 cut(s) 122
BcoDI GTCTC 2 cut(s) 790, 889
BfaI CTAG 7 cut(s) 44, 258, 275, 411, 536, 818, 836
BfmI CTRYAG 1 cut(s) 1045
BfoI RGCGCY 1 cut(s) 398
BfrI CTTAAG 1 cut(s) 971
BfuAI ACCTGC 1 cut(s) 38
BfuI GTATCC 1 cut(s) 1069
BglII AGATCT 1 cut(s) 313
BisI GCNGC 6 cut(s) 33, 337, 569, 572, 810, 1098
BlsI GCNGC 6 cut(s) 34, 338, 570, 573, 811, 1099
Bme1390I CCNGG 2 cut(s) 122, 473
Bme18I GGWCC 1 cut(s) 830
BmgBI CACGTC 1 cut(s) 719
BmgT120I GGNCC 2 cut(s) 830, 1052
BmiI GGNNCC 3 cut(s) 227, 396, 451
BmrFI CCNGG 2 cut(s) 122, 473
BmsI GCATC 1 cut(s) 852
BpiI GAAGAC 5 cut(s) 7, 197, 226, 365, 804
BpuMI CCSGG 1 cut(s) 122
BsaHI GRCGYC 2 cut(s) 297, 395
BsaJI CCNNGG 4 cut(s) 292, 361, 472, 919
Bsc4I CCNNNNNNNGG 2 cut(s) 713, 973
BseBI CCWGG 1 cut(s) 473
BseDI CCNNGG 4 cut(s) 292, 361, 472, 919
BseGI GGATG 2 cut(s) 799, 867
BseLI CCNNNNNNNGG 2 cut(s) 713, 973
BseMII CTCAG 4 cut(s) 218, 324, 401, 574
BseRI GAGGAG 3 cut(s) 134, 140, 894
BseSI GKGCMC 1 cut(s) 893
BseXI GCAGC 5 cut(s) 44, 580, 583, 796, 1084
Bsh1236I CGCG 1 cut(s) 200
BshFI GGCC 1 cut(s) 1054
BshNI GGYRCC 1 cut(s) 394
BsiHKAI GWGCWC 4 cut(s) 216, 517, 529, 930
BsiSI CCGG 2 cut(s) 75, 122
BslFI GGGAC 1 cut(s) 104
BslI CCNNNNNNNGG 2 cut(s) 713, 973
BsmAI GTCTC 2 cut(s) 790, 889
BsmFI GGGAC 1 cut(s) 104
BsnI GGCC 1 cut(s) 1054
Bsp1286I GDGCHC 5 cut(s) 216, 517, 529, 893, 930
Bsp143I GATC 8 cut(s) 4, 59, 105, 217, 277, 313, 415, 598
Bsp19I CCATGG 1 cut(s) 919
BspACI CCGC 3 cut(s) 334, 337, 729
BspANI GGCC 1 cut(s) 1054
BspCNI CTCAG 4 cut(s) 217, 323, 400, 573
BspFNI CGCG 1 cut(s) 200
BspLI GGNNCC 3 cut(s) 227, 396, 451
BspMAI CTGCAG 1 cut(s) 1049
BspMI ACCTGC 1 cut(s) 38
BspPI GGATC 4 cut(s) 12, 67, 272, 593
BspT107I GGYRCC 1 cut(s) 394
BspTI CTTAAG 1 cut(s) 971
BssECI CCNNGG 4 cut(s) 292, 361, 472, 919
BssMI GATC 8 cut(s) 4, 59, 105, 217, 277, 313, 415, 598
BssNI GRCGYC 2 cut(s) 297, 395
BssSI CACGAG 2 cut(s) 886, 1003
BssT1I CCWWGG 1 cut(s) 919
Bst2BI CACGAG 2 cut(s) 886, 1003
Bst2UI CCWGG 1 cut(s) 473
Bst4CI ACNGT 3 cut(s) 67, 92, 1093
Bst6I CTCTTC 2 cut(s) 690, 793
BstACI GRCGYC 2 cut(s) 297, 395
BstAFI CTTAAG 1 cut(s) 971
BstDEI CTNAG 5 cut(s) 204, 248, 310, 387, 560
BstDSI CCRYGG 2 cut(s) 292, 919
BstEII GGTNACC 1 cut(s) 82
BstENI CCTNNNNNAGG 1 cut(s) 711
BstF5I GGATG 2 cut(s) 799, 867
BstFNI CGCG 1 cut(s) 200
BstH2I RGCGCY 1 cut(s) 398
BstHHI GCGC 1 cut(s) 397
BstKTI GATC 8 cut(s) 7, 62, 108, 220, 280, 316, 418, 601
BstMAI GTCTC 2 cut(s) 790, 889
BstMBI GATC 8 cut(s) 4, 59, 105, 217, 277, 313, 415, 598
BstMWI GCNNNNNNNGC 4 cut(s) 268, 512, 674, 851
BstNI CCWGG 1 cut(s) 473
BstPI GGTNACC 1 cut(s) 82
BstSCI CCNGG 2 cut(s) 120, 471
BstSFI CTRYAG 1 cut(s) 1045
BstSLI GKGCMC 1 cut(s) 893
BstUI CGCG 1 cut(s) 200
BstV1I GCAGC 5 cut(s) 44, 580, 583, 796, 1084
BstV2I GAAGAC 5 cut(s) 7, 197, 226, 365, 804
BstX2I RGATCY 3 cut(s) 59, 277, 313
BstXI CCANNNNNNTGG 1 cut(s) 920
BstYI RGATCY 3 cut(s) 59, 277, 313
BsuI GTATCC 1 cut(s) 1069
BsuRI GGCC 1 cut(s) 1054
BtgI CCRYGG 2 cut(s) 292, 919
BtgZI GCGATG 3 cut(s) 13, 869, 1028
BtrI CACGTC 1 cut(s) 719
BtsCI GGATG 2 cut(s) 799, 867
BtsI GCAGTG 1 cut(s) 640
BtsIMutI CAGTG 2 cut(s) 568, 640
BveI ACCTGC 1 cut(s) 38
CfoI GCGC 1 cut(s) 397
Cfr13I GGNCC 2 cut(s) 830, 1052
CseI GACGC 1 cut(s) 286
Csp6I GTAC 2 cut(s) 184, 664
CviAII CATG 6 cut(s) 489, 590, 618, 827, 920, 1028
CviQI GTAC 2 cut(s) 184, 664
DdeI CTNAG 5 cut(s) 204, 248, 310, 387, 560
DinI GGCGCC 1 cut(s) 396
DpnI GATC 8 cut(s) 6, 61, 107, 219, 279, 315, 417, 600
DpnII GATC 8 cut(s) 4, 59, 105, 217, 277, 313, 415, 598
Eam1104I CTCTTC 2 cut(s) 690, 793
EarI CTCTTC 2 cut(s) 690, 793
EciI GGCGGA 1 cut(s) 323
Ecl136II GAGCTC 1 cut(s) 515
Eco130I CCWWGG 1 cut(s) 919
Eco24I GRGCYC 1 cut(s) 517
Eco47I GGWCC 1 cut(s) 830
Eco53kI GAGCTC 1 cut(s) 515
Eco57I CTGAAG 1 cut(s) 760
Eco91I GGTNACC 1 cut(s) 82
EcoICRI GAGCTC 1 cut(s) 515
EcoNI CCTNNNNNAGG 1 cut(s) 711
EcoO109I RGGNCCY 1 cut(s) 1052
EcoO65I GGTNACC 1 cut(s) 82
EcoRI GAATTC 1 cut(s) 329
EcoRII CCWGG 1 cut(s) 471
EcoT14I CCWWGG 1 cut(s) 919
EcoT38I GRGCYC 1 cut(s) 517
EgeI GGCGCC 1 cut(s) 396
EheI GGCGCC 1 cut(s) 396
ErhI CCWWGG 1 cut(s) 919
FaeI CATG 6 cut(s) 492, 593, 621, 830, 923, 1031
FaqI GGGAC 1 cut(s) 104
FatI CATG 6 cut(s) 488, 589, 617, 826, 919, 1027
Fnu4HI GCNGC 6 cut(s) 33, 337, 569, 572, 810, 1098
FokI GGATG 2 cut(s) 806, 874
FriOI GRGCYC 1 cut(s) 517
Fsp4HI GCNGC 6 cut(s) 33, 337, 569, 572, 810, 1098
FspBI CTAG 7 cut(s) 44, 258, 275, 411, 536, 818, 836
GlaI GCGC 1 cut(s) 396
GluI GCNGC 6 cut(s) 33, 337, 569, 572, 810, 1098
HaeII RGCGCY 1 cut(s) 398
HaeIII GGCC 1 cut(s) 1054
HapII CCGG 2 cut(s) 75, 122
HgaI GACGC 1 cut(s) 286
HhaI GCGC 1 cut(s) 397
Hin1I GRCGYC 2 cut(s) 297, 395
Hin1II CATG 6 cut(s) 492, 593, 621, 830, 923, 1031
Hin6I GCGC 1 cut(s) 395
HinP1I GCGC 1 cut(s) 395
HincII GTYRAC 1 cut(s) 100
HindII GTYRAC 1 cut(s) 100
HinfI GANTC 3 cut(s) 202, 623, 882
HpaI GTTAAC 1 cut(s) 100
HpaII CCGG 2 cut(s) 75, 122
HphI GGTGA 1 cut(s) 1104
Hpy166II GTNNAC 3 cut(s) 100, 292, 443
Hpy188I TCNGA 7 cut(s) 59, 313, 324, 390, 408, 423, 793
Hpy188III TCNNGA 3 cut(s) 275, 518, 997
Hpy8I GTNNAC 3 cut(s) 100, 292, 443
Hpy99I CGWCG 2 cut(s) 92, 427
HpyAV CCTTC 2 cut(s) 515, 685
HpyCH4III ACNGT 3 cut(s) 67, 92, 1093
HpyCH4IV ACGT 2 cut(s) 38, 718
HpyCH4V TGCA 4 cut(s) 633, 865, 959, 1047
HpyF10VI GCNNNNNNNGC 4 cut(s) 268, 512, 674, 851
HpyF3I CTNAG 5 cut(s) 204, 248, 310, 387, 560
HpySE526I ACGT 2 cut(s) 38, 718
Hsp92I GRCGYC 2 cut(s) 297, 395
Hsp92II CATG 6 cut(s) 492, 593, 621, 830, 923, 1031
HspAI GCGC 1 cut(s) 395
KasI GGCGCC 1 cut(s) 394
KspAI GTTAAC 1 cut(s) 100
Kzo9I GATC 8 cut(s) 4, 59, 105, 217, 277, 313, 415, 598
LmnI GCTCC 4 cut(s) 449, 512, 524, 1010
Lsp1109I GCAGC 5 cut(s) 44, 580, 583, 796, 1084
LweI GCATC 1 cut(s) 852
MaeI CTAG 7 cut(s) 44, 258, 275, 411, 536, 818, 836
MaeII ACGT 2 cut(s) 38, 718
MaeIII GTNAC 8 cut(s) 39, 82, 263, 298, 454, 584, 719, 1031
MalI GATC 8 cut(s) 6, 61, 107, 219, 279, 315, 417, 600
MboI GATC 8 cut(s) 4, 59, 105, 217, 277, 313, 415, 598
MflI RGATCY 3 cut(s) 59, 277, 313
MhlI GDGCHC 5 cut(s) 216, 517, 529, 893, 930
MluCI AATT 2 cut(s) 329, 613
Mly113I GGCGCC 1 cut(s) 395
MlyI GAGTC 2 cut(s) 196, 891
MmeI TCCRAC 3 cut(s) 431, 446, 916
MroXI GAANNNNTTC 1 cut(s) 329
MseI TTAA 4 cut(s) 99, 465, 672, 972
MslI CAYNNNNRTG 1 cut(s) 594
MspCI CTTAAG 1 cut(s) 971
MspI CCGG 2 cut(s) 75, 122
MspR9I CCNGG 2 cut(s) 122, 473
MvaI CCWGG 1 cut(s) 473
MvnI CGCG 1 cut(s) 200
MwoI GCNNNNNNNGC 4 cut(s) 268, 512, 674, 851
NarI GGCGCC 1 cut(s) 395
NciI CCSGG 1 cut(s) 122
NcoI CCATGG 1 cut(s) 919
NdeII GATC 8 cut(s) 4, 59, 105, 217, 277, 313, 415, 598
NlaIII CATG 6 cut(s) 492, 593, 621, 830, 923, 1031
NlaIV GGNNCC 3 cut(s) 227, 396, 451
NmeAIII GCCGAG 1 cut(s) 386
NmuCI GTSAC 4 cut(s) 298, 454, 584, 719
PcsI WCGNNNNNNNCGW 3 cut(s) 63, 259, 1010
PdmI GAANNNNTTC 1 cut(s) 329
PfeI GAWTC 1 cut(s) 623
PfoI TCCNGGA 1 cut(s) 120
PkrI GCNGC 6 cut(s) 34, 338, 570, 573, 811, 1099
PleI GAGTC 2 cut(s) 196, 890
PluTI GGCGCC 1 cut(s) 398
PpsI GAGTC 2 cut(s) 196, 890
Psp124BI GAGCTC 1 cut(s) 517
Psp6I CCWGG 1 cut(s) 471
PspEI GGTNACC 1 cut(s) 82
PspGI CCWGG 1 cut(s) 471
PspN4I GGNNCC 3 cut(s) 227, 396, 451
PspPI GGNCC 2 cut(s) 830, 1052
PsrI GAACNNNNNNTAC 2 cut(s) 469, 501
PstI CTGCAG 1 cut(s) 1049
PsuI RGATCY 3 cut(s) 59, 277, 313
RsaI GTAC 2 cut(s) 185, 665
RsaNI GTAC 2 cut(s) 184, 664
RseI CAYNNNNRTG 1 cut(s) 594
SacI GAGCTC 1 cut(s) 517
SaqAI TTAA 4 cut(s) 99, 465, 672, 972
SatI GCNGC 6 cut(s) 33, 337, 569, 572, 810, 1098
Sau3AI GATC 8 cut(s) 4, 59, 105, 217, 277, 313, 415, 598
Sau96I GGNCC 2 cut(s) 830, 1052
SchI GAGTC 2 cut(s) 196, 891
ScrFI CCNGG 2 cut(s) 122, 473
SduI GDGCHC 5 cut(s) 216, 517, 529, 893, 930
SfaNI GCATC 1 cut(s) 852
SfcI CTRYAG 1 cut(s) 1045
SfoI GGCGCC 1 cut(s) 396
SinI GGWCC 1 cut(s) 830
SmiMI CAYNNNNRTG 1 cut(s) 594
SmlI CTYRAG 1 cut(s) 971
SmoI CTYRAG 1 cut(s) 971
Sse9I AATT 2 cut(s) 329, 613
SsiI CCGC 3 cut(s) 334, 337, 729
SspDI GGCGCC 1 cut(s) 394
SspMI CTAG 7 cut(s) 44, 258, 275, 411, 536, 818, 836
SstI GAGCTC 1 cut(s) 517
StyD4I CCNGG 2 cut(s) 120, 471
StyI CCWWGG 1 cut(s) 919
TaaI ACNGT 3 cut(s) 67, 92, 1093
TaiI ACGT 2 cut(s) 41, 721
TaqI TCGA 2 cut(s) 432, 741
TasI AATT 2 cut(s) 329, 613
TauI GCSGC 1 cut(s) 339
TfiI GAWTC 1 cut(s) 623
Tru1I TTAA 4 cut(s) 99, 465, 672, 972
Tru9I TTAA 4 cut(s) 99, 465, 672, 972
TscAI CASTG 2 cut(s) 568, 640
TseFI GTSAC 4 cut(s) 298, 454, 584, 719
TseI GCWGC 5 cut(s) 32, 568, 571, 809, 1097
Tsp45I GTSAC 4 cut(s) 298, 454, 584, 719
TspDTI ATGAA 8 cut(s) 150, 477, 606, 662, 704, 810, 936, 1094
TspGWI ACGGA 4 cut(s) 218, 270, 440, 956
TspRI CASTG 2 cut(s) 568, 640
Vha464I CTTAAG 1 cut(s) 971
VpaK11BI GGWCC 1 cut(s) 830
XagI CCTNNNNNAGG 1 cut(s) 711
XapI RAATTY 1 cut(s) 329
XbaI TCTAGA 1 cut(s) 274
XcmI CCANNNNNNNNNTGG 1 cut(s) 479
XmnI GAANNNNTTC 1 cut(s) 329
XspI CTAG 7 cut(s) 44, 258, 275, 411, 536, 818, 836
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.