Basic Information

Type: gene

Biological Identity

Species

arabidopsis_thaliana

Chromosome

Orthogroup ID

OG0005890

Physical Location & Seq

Genomic Coordinates Forward (+)

10329613 .. 10334383

Gene Structure 4771 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

AT4G18820.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3294 bp

ATGACGACGACGACTACTACTACGACAAGGGTTGCTTCTTCTTCTTCAACACGGAACAATCGAATTCTGAAAGATGCAAATGGAGATATCGGTGAGCATCTTCGTAACCATATCCATTTAACGAATTGTATTCATTTGAAGAACAATATGCATAAGCAGAGTCCTGTTTTAACTGACCGTGCCTTAATGAGAGACCTCATTGTTCTCCAAAGGTCACGGTCTCTTAGAGATCCATCTGCGAGCCCTCCTGCTTGGAACACGCCTCCTTCTGTTGTGGATTTGCTTCCGAAGAAAGGAGATCTTGTGGAAGGAGGAAGAAGATCTGTTGATTTAAAGAAGTCTAGTCGTAGGTTGTCTGCTTTGAGTGGTTCTTCACCTGTTGTCAACTTTGGGACATCTAAAGTGACTCCTTCTGATGAGAGGTCTGGTCCTGTTAGTGGTGAAAGGGATAGTGGTAGGAGAGTTAAGAGAGAGGAATCTAGTAGAAAGAGTTATAGAATTGGGGATGATTATCAAAATGTTAATGAGGTTGTTTCTCATGGTTCGGGATCAAAAGCTAGTAGGAGGCTTAGTAGGGTTAATGATGCTATGGTTAAGACATTGTCTGATCAGTTAAATGAGGTTGTTGTTGGTGATAGTGATGATGTGGTTTCATCTAATGTTCGTCCACGGGTTAGGTATGGAGGAGGTGGTGGTGGTGGTAATACTCGGGGATGTGCGGGTGGAATGAGTCGGCCTAAAAGACGGAAGTTTAGAGGGACGAGGAGAGTTCGGGGTAAGAGTAGAGATACTGGTGGTGGTAAGAGTGAGATGTCTGTTGCTTCTAACACATTGCCTCAAGTTGAGAAGCATGATGGAGAAAAAGAGGGATTTGGGGAACAGAACATGACAAAGGCTTGTGGGATTCCATTTAATTGGTCAAGAATTCATCACCGAGGGAAAACTTTTCTTGATAAGGCGGGTAGGAGTTTGTCTTGTGGTATGTCTGATTCGAAAGGTGGTAGGAAAGGTGAAACTAATGAGAGAAATGGTTCTGATAAGATGATGATACAATCTGATGATGACTCAAGCTCTTTTATCGGCTCTGATGGTGAAGCACTTCCTTTACTAGTTGATAGTGGAGAGAATGATGGTTGGGTGCACGATTACTCGGGGGAGCTAGGTATTTTTGCAGACAGTCTGCTCAAGAACGATGAGGATTCTGACCTTGCTTCAGAAGGAAGGTCAGGGGAGAAAAAACACAAAAAGAAGAGCCATGTAAATGCTCGGCATCGACATCGGCAACAGCATCAGAGTCTTACTGAAAAATACACACCTAAAACATTCCGGGATCTTCTGGGGCAGAATCTGGTGGTACAAGCTCTTTCTAATGCAGTTGCTAGACGAAAGCTTGGACTTTTGTATGTCTTCCACGGTCCAAATGGAACCGGAAAGACCTCTTGCGCTAGGATATTTGCAAGGGCTTTGAACTGTCATTCCATGGAACAACCAAAGCCTTGTGGCACTTGCAGTTCTTGTGTTTCACATGATATGGGTAAAAGCTGGAACATTCGGGAAGTGGGTCCTGTTGGGAACTATGACTTTGAGAAAATAATGGATTTACTTGATGGTAATGTGATGGTTTCATCTCAGTCCCCTCGGGTGTTCATATTTGATGATTGTGATACTTTGTCATCTGATTGTTGGAATGCGTTGTCCAAAGTGGTGGATCGAGCAGCGCCACGTCATGTAGTCTTTATCCTCGTCTGTTCGAGTCTTGATGTTTTGCCTCATGTGATCATATCTAGGTGCCAGAAATTCTTTTTCCCGAAACTGAAGGACGCAGATATAGTTTACTCATTGCAATGGATTGCATCAAAGGAAGAGATTGAGATAGATAAAGATGCATTGAAGCTTATTGCTTCAAGATCAGATGGTTCATTAAGAGATGCTGAGATGACTCTTGAACAGCTGAGTTTGTTAGGACAGAGGATCTCTGTTCCTTTAGTTCAGGAACTGGTTGGGCTTGTTTCTGATGAAAAATTAGTGGATCTTCTTGATTTAGCTTTATCTGCAGATACTGTAAATACTGTGAAGAATCTGAGAACAATAATGGAAACAAGTGTAGAACCATTGGCTTTAATGTCTCAGCTTGCAACGGTCATAACTGATATTCTTGCTGGTAGTTATGATTTCACTAAAGATCAGCATAAAAGAAAGTTTTTTCGACGACAACCATTACCTAAAGAAGATATGGAGAAACTGAGACAGGCACTTAAGACGTTATCAGAGGCAGAGAAACAGCTGAGAGTATCAAACGATAAACTGACTTGGCTCACAGCCGCGTTGCTTCAATTGGCTCCTGATCAGAACTATCTGCTTCAACGTTCGTCCACTGCAGACACTGGAGGTAGAGAAAGCTCAGATCACCATCTGGATCCTTCTAGCGATGCAGCTGGTGGAAGAAGTTCTGGTTTGGACAGAAGAAGAGGTGATAGTAGAAAAAACCGACCCGCTGTTGAAGAAATTTGGTTAGAGGTTATTGAGAAGCTTCGAGTTAACGGTTTGAGAGAGTTTCTTTATAAAGAAGGAAGAATCGTCTCTCTTAATCTCGGATCAGCTCCTACTGTGCATCTAATGTTCAGTTCTCCGTTAACCAAATCCACGGCTGAGAAATTCCGAAGCCATATTATGCAAGCGTTTGAGGCAGTTCTTGAGTCACCTGTCACAATAGAGATCAGATGCGAGACAAAAAAAGACCCGAGAAACAACGTGCATCATCATCATCATCACCCAACTGTGAAAGACAAAAGCCTGCCACAATCTTTAGCACTCATTGGCCATGATTACAACATCGATGGAAGTGGAAGAAGTGAGATAGTTGAAGTTACTGAATCTAATGGACAAAGACGACAACAACAGAAGCAACAGGAAGAGGAGAGGACAGAGCCAGTTGGTTCCTCTGCGTTAGCCCGAGCTAGAAGGAAACATTTGGAAGCAAGCCAGAGTCAGAACCAGAGCCAAAGCATTGTGAGAGGTAAGGTCTCGTTGGCTCATGTGATTCAGCAAGCTGACGGATGCTCACTCCAGAACGGTTGGTCTAAACGCAAGGCCGTGTCTATCGCCGAGAAGCTGGAACAAGAAAATCTGAGACTTGAACCAAGATCAAGAAGCTTGTTATGCTGGAAATCCTCAAGAGGCACACGTCGCAAGGCCACGAGGTTGAAGGTGAGAACAAGAAGGGCAAGACCACATACGTTACTTAAGCTCGTGTCGTGCGGCAAATGCCTGTCTACGAGATCTCCAACAAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005657 GO:0005663 GO:0005694 GO:0005886 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006281 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0016020 GO:0032991 GO:0033554 GO:0034641 GO:0034645 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0046483 GO:0050896 GO:0051716 GO:0071704 GO:0071944 GO:0090304 GO:1901360 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DNA_pol3_delta2 DNA_pol3_gamma3

Protein Analysis

1097

Amino Acids

121.79

Weight (kDa)

9.59

Isoelectric Point (pI)

57.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DNA_pol3_delta2	PF13177	448 - 605	8e-21	DNA polymerase III, delta subunit
AAA	PF00004	469 - 602	2.9e-08	ATPase family associated with various cellular activities (AAA)
DNAX_ATPase_lid	PF22608	610 - 658	4.7e-07	DNA polymerase III clamp loader subunit, ATPase lid domain
DnaA_N-like_STI	PF23007	826 - 908	7.4e-27	STICHEL, DnaA_N-like alpha-beta domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0005890)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G18820
fragaria_vesca	FvH4_3g07230 FvH4_3g07230 FvH4_3g07230 FvH4_3g07230 FvH4_3g07230 FvH4_3g07230 FvH4_3g07230 FvH4_3g07230
malus_domestica	MD00G1008200.v1.1 MD10G1274700.v1.1
prunus_persica	Prupe.4G067700_v2.0.a1 Prupe.4G067700_v2.0.a1 Prupe.4G067700_v2.0.a1 Prupe.4G067700_v2.0.a1
pyrus_communis	pycom05g27350 pycom10g22920
rosa_chinensis	RchiOBHm_Chr5g0011921
rosa_laevigata	RLG00000031869
rosa_multiflora	Rmu_sc0001475.1_g000004
rosa_roxburghii	Rroxscaffold_1G00064670
rosa_rugosa	Rorug04G0460000 Rorug04G0460100
rosa_samantha	Rh5AG091500 Rh5BG087300 Rh5CG101200 Rh5DG087900
rosa_wichuraiana	Rw5G007980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2562
AccB1I	GGYRCC	1 cut(s)	1788
AccI	GTMKAC	1 cut(s)	3272
AccII	CGCG	1 cut(s)	2324
AciI	CCGC	5 cut(s)	719, 959, 2322, 2493, 3258
AclI	AACGTT	1 cut(s)	2365
AclWI	GGATC	9 cut(s)	224, 556, 1338, 1716, 1979, 2037, 2411, 2424, 2602
AcoI	YGGCCR	1 cut(s)	2818
AcsI	RAATTY	5 cut(s)	63, 924, 1796, 2505, 2654
AcuI	CTGAAG	2 cut(s)	1197, 1835
AfaI	GTAC	1 cut(s)	1356
AfiI	CCNNNNNNNGG	2 cut(s)	293, 437
AflII	CTTAAG	2 cut(s)	2255, 3242
AflIII	ACRYGT	1 cut(s)	3182
AhlI	ACTAGT	1 cut(s)	1108
AjiI	CACGTC	2 cut(s)	1724, 3185
AloI	GAACNNNNNNTCC	2 cut(s)	1460, 1492
Alw21I	GWGCWC	1 cut(s)	1143
Alw26I	GTCTC	8 cut(s)	186, 225, 2130, 2239, 2584, 2720, 3028, 3124
Alw44I	GTGCAC	1 cut(s)	1139
AlwI	GGATC	9 cut(s)	224, 556, 1338, 1716, 1979, 2037, 2411, 2424, 2602
AlwNI	CAGNNNCTG	4 cut(s)	1348, 1996, 2060, 2384
Ama87I	CYCGRG	5 cut(s)	708, 1150, 1638, 2740, 2952
AoxI	GGCC	4 cut(s)	734, 2818, 3090, 3192
ApaLI	GTGCAC	1 cut(s)	1139
ApeKI	GCWGC	2 cut(s)	1715, 2432
ApoI	RAATTY	5 cut(s)	63, 924, 1796, 2505, 2654
Asp700I	GAANNNNTTC	3 cut(s)	1030, 1098, 2446
AspLEI	GCGC	2 cut(s)	1445, 1720
AspS9I	GGNCC	3 cut(s)	428, 1415, 1562
AsuC2I	CCSGG	1 cut(s)	1328
AsuII	TTCGAA	1 cut(s)	992
AvaI	CYCGRG	5 cut(s)	708, 1150, 1638, 2740, 2952
AvaII	GGWCC	3 cut(s)	428, 1415, 1562
BaeGI	GKGCMC	1 cut(s)	1143
BalI	TGGCCA	1 cut(s)	2820
BamHI	GGATCC	1 cut(s)	2416
BanI	GGYRCC	1 cut(s)	1788
BanII	GRGCYC	1 cut(s)	245
BauI	CACGAG	2 cut(s)	3196, 3248
BbsI	GAAGAC	1 cut(s)	1399
Bbv12I	GWGCWC	1 cut(s)	1143
BbvI	GCAGC	2 cut(s)	1727, 2444
BccI	CCATC	9 cut(s)	241, 848, 1082, 1124, 1601, 1612, 1907, 2418, 2831
BceAI	ACGGC	2 cut(s)	2661, 3077
BcgI	CGANNNNNNTGC	2 cut(s)	1259, 1293
BclI	TGATCA	3 cut(s)	607, 1776, 2344
BcnI	CCSGG	1 cut(s)	1328
BcoDI	GTCTC	8 cut(s)	186, 225, 2130, 2239, 2584, 2720, 3028, 3124
BcuI	ACTAGT	1 cut(s)	1108
BfmI	CTRYAG	2 cut(s)	2052, 2376
BfoI	RGCGCY	1 cut(s)	1721
BfrI	CTTAAG	2 cut(s)	2255, 3242
BglII	AGATCT	3 cut(s)	298, 320, 3278
BisI	GCNGC	4 cut(s)	1716, 2322, 2433, 3259
BlsI	GCNGC	4 cut(s)	1717, 2323, 2434, 3260
Bme1390I	CCNGG	1 cut(s)	1328
Bme18I	GGWCC	3 cut(s)	428, 1415, 1562
BmeT110I	CYCGRG	5 cut(s)	708, 1150, 1638, 2740, 2952
BmgBI	CACGTC	2 cut(s)	1724, 3185
BmgT120I	GGNCC	3 cut(s)	428, 1415, 1562
BmiI	GGNNCC	6 cut(s)	1426, 1563, 1790, 2340, 2418, 2938
BmrFI	CCNGG	1 cut(s)	1328
BpiI	GAAGAC	1 cut(s)	1399
BpmI	CTGGAG	2 cut(s)	2406, 3050
Bpu14I	TTCGAA	1 cut(s)	992
BpuEI	CTTGAG	5 cut(s)	822, 1051, 1169, 2714, 3157
BpuMI	CCSGG	1 cut(s)	1328
Bsa29I	ATCGAT	1 cut(s)	2835
BsaBI	GATNNNNATC	2 cut(s)	510, 2409
BsaI	GGTCTC	3 cut(s)	186, 225, 3028
BsaJI	CCNNGG	6 cut(s)	668, 934, 1411, 1479, 1637, 2643
BsaWI	WCCGGW	1 cut(s)	1427
BsaXI	ACNNNNNCTCC	5 cut(s)	288, 318, 556, 586, 3265
Bsc4I	CCNNNNNNNGG	2 cut(s)	293, 437
Bse1I	ACTGG	4 cut(s)	796, 2001, 2389, 2930
Bse3DI	GCAATG	3 cut(s)	830, 1838, 1850
Bse8I	GATNNNNATC	2 cut(s)	510, 2409
BseCI	ATCGAT	1 cut(s)	2835
BseDI	CCNNGG	6 cut(s)	668, 934, 1411, 1479, 1637, 2643
BseGI	GGATG	3 cut(s)	511, 719, 3062
BseJI	GATNNNNATC	2 cut(s)	510, 2409
BseLI	CCNNNNNNNGG	2 cut(s)	293, 437
BseMI	GCAATG	3 cut(s)	830, 1838, 1850
BseNI	ACTGG	4 cut(s)	796, 2001, 2389, 2930
BseRI	GAGGAG	3 cut(s)	699, 778, 2930
BseSI	GKGCMC	1 cut(s)	1143
BseXI	GCAGC	2 cut(s)	1727, 2444
Bsh1236I	CGCG	1 cut(s)	2324
BshFI	GGCC	4 cut(s)	736, 2820, 3092, 3194
BshNI	GGYRCC	1 cut(s)	1788
BshVI	ATCGAT	1 cut(s)	2835
BsiHKAI	GWGCWC	1 cut(s)	1143
BsiHKCI	CYCGRG	5 cut(s)	708, 1150, 1638, 2740, 2952
BsiSI	CCGG	2 cut(s)	1327, 1428
BslFI	GGGAC	3 cut(s)	406, 772, 1618
BslI	CCNNNNNNNGG	2 cut(s)	293, 437
BsmAI	GTCTC	8 cut(s)	186, 225, 2130, 2239, 2584, 2720, 3028, 3124
BsmBI	CGTCTC	1 cut(s)	2584
BsmFI	GGGAC	3 cut(s)	406, 772, 1618
BsmI	GAATGC	1 cut(s)	1693
BsnI	GGCC	4 cut(s)	736, 2820, 3092, 3194
Bso31I	GGTCTC	3 cut(s)	186, 225, 3028
BsoBI	CYCGRG	5 cut(s)	708, 1150, 1638, 2740, 2952
Bsp119I	TTCGAA	1 cut(s)	992
Bsp1286I	GDGCHC	2 cut(s)	245, 1143
Bsp19I	CCATGG	1 cut(s)	1479
BspACI	CCGC	5 cut(s)	719, 959, 2322, 2493, 3258
BspANI	GGCC	4 cut(s)	736, 2820, 3092, 3194
BspDI	ATCGAT	1 cut(s)	2835
BspFNI	CGCG	1 cut(s)	2324
BspLI	GGNNCC	6 cut(s)	1426, 1563, 1790, 2340, 2418, 2938
BspMAI	CTGCAG	2 cut(s)	2056, 2380
BspPI	GGATC	9 cut(s)	224, 556, 1338, 1716, 1979, 2037, 2411, 2424, 2602
BspQI	GCTCTTC	1 cut(s)	1244
BspT104I	TTCGAA	1 cut(s)	992
BspT107I	GGYRCC	1 cut(s)	1788
BspTI	CTTAAG	2 cut(s)	2255, 3242
BspTNI	GGTCTC	3 cut(s)	186, 225, 3028
BsrDI	GCAATG	3 cut(s)	830, 1838, 1850
BsrI	ACTGG	4 cut(s)	796, 2001, 2389, 2930
BssECI	CCNNGG	6 cut(s)	668, 934, 1411, 1479, 1637, 2643
BssSI	CACGAG	2 cut(s)	3196, 3248
BssT1I	CCWWGG	1 cut(s)	1479
Bst2BI	CACGAG	2 cut(s)	3196, 3248
Bst6I	CTCTTC	4 cut(s)	1244, 1857, 2461, 2907
BstAFI	CTTAAG	2 cut(s)	2255, 3242
BstBI	TTCGAA	1 cut(s)	992
BstC8I	GCNNGC	6 cut(s)	241, 2133, 2676, 2795, 2980, 3048
BstDSI	CCRYGG	4 cut(s)	668, 1411, 1479, 2643
BstF5I	GGATG	3 cut(s)	511, 719, 3062
BstFNI	CGCG	1 cut(s)	2324
BstH2I	RGCGCY	1 cut(s)	1721
BstHHI	GCGC	2 cut(s)	1445, 1720
BstMAI	GTCTC	8 cut(s)	186, 225, 2130, 2239, 2584, 2720, 3028, 3124
BstMWI	GCNNNNNNNGC	5 cut(s)	2051, 2684, 3159, 3186, 3264
BstSCI	CCNGG	1 cut(s)	1326
BstSFI	CTRYAG	2 cut(s)	2052, 2376
BstSLI	GKGCMC	1 cut(s)	1143
BstUI	CGCG	1 cut(s)	2324
BstV1I	GCAGC	2 cut(s)	1727, 2444
BstV2I	GAAGAC	1 cut(s)	1399
BstX2I	RGATCY	8 cut(s)	229, 298, 320, 1330, 1971, 2029, 2416, 3278
BstXI	CCANNNNNNTGG	2 cut(s)	915, 1705
BstYI	RGATCY	8 cut(s)	229, 298, 320, 1330, 1971, 2029, 2416, 3278
Bsu15I	ATCGAT	1 cut(s)	2835
BsuRI	GGCC	4 cut(s)	736, 2820, 3092, 3194
BsuTUI	ATCGAT	1 cut(s)	2835
BtgI	CCRYGG	4 cut(s)	668, 1411, 1479, 2643
BtgZI	GCGATG	1 cut(s)	2442
BtrI	CACGTC	2 cut(s)	1724, 3185
BtsCI	GGATG	3 cut(s)	511, 719, 3062
BtsI	GCAGTG	1 cut(s)	2373
BtsIMutI	CAGTG	2 cut(s)	2373, 2382
Cac8I	GCNNGC	6 cut(s)	241, 2133, 2676, 2795, 2980, 3048
CaiI	CAGNNNCTG	4 cut(s)	1348, 1996, 2060, 2384
CfoI	GCGC	2 cut(s)	1445, 1720
Cfr13I	GGNCC	3 cut(s)	428, 1415, 1562
ClaI	ATCGAT	1 cut(s)	2835
CseI	GACGC	1 cut(s)	1829
Csp6I	GTAC	1 cut(s)	1355
CviQI	GTAC	1 cut(s)	1355
DraI	TTTAAA	1 cut(s)	333
EaeI	YGGCCR	1 cut(s)	2818
Eam1104I	CTCTTC	4 cut(s)	1244, 1857, 2461, 2907
EarI	CTCTTC	4 cut(s)	1244, 1857, 2461, 2907
Eco130I	CCWWGG	1 cut(s)	1479
Eco24I	GRGCYC	1 cut(s)	245
Eco31I	GGTCTC	3 cut(s)	186, 225, 3028
Eco32I	GATATC	1 cut(s)	88
Eco47I	GGWCC	3 cut(s)	428, 1415, 1562
Eco57I	CTGAAG	2 cut(s)	1197, 1835
Eco88I	CYCGRG	5 cut(s)	708, 1150, 1638, 2740, 2952
EcoO109I	RGGNCCY	1 cut(s)	1562
EcoRI	GAATTC	2 cut(s)	63, 924
EcoRV	GATATC	1 cut(s)	88
EcoT14I	CCWWGG	1 cut(s)	1479
EcoT22I	ATGCAT	2 cut(s)	153, 1888
EcoT38I	GRGCYC	1 cut(s)	245
ErhI	CCWWGG	1 cut(s)	1479
Esp3I	CGTCTC	1 cut(s)	2584
FalI	AAGNNNNNCTT	4 cut(s)	19, 51, 285, 317
FaqI	GGGAC	3 cut(s)	406, 772, 1618
FauI	CCCGC	3 cut(s)	712, 952, 2500
FbaI	TGATCA	3 cut(s)	607, 1776, 2344
FblI	GTMKAC	1 cut(s)	3272
Fnu4HI	GCNGC	4 cut(s)	1716, 2322, 2433, 3259
FokI	GGATG	3 cut(s)	518, 726, 3069
FriOI	GRGCYC	1 cut(s)	245
Fsp4HI	GCNGC	4 cut(s)	1716, 2322, 2433, 3259
GlaI	GCGC	2 cut(s)	1444, 1719
GluI	GCNGC	4 cut(s)	1716, 2322, 2433, 3259
GsuI	CTGGAG	2 cut(s)	2406, 3050
HaeII	RGCGCY	1 cut(s)	1721
HaeIII	GGCC	4 cut(s)	736, 2820, 3092, 3194
HapII	CCGG	2 cut(s)	1327, 1428
HgaI	GACGC	1 cut(s)	1829
HhaI	GCGC	2 cut(s)	1445, 1720
Hin6I	GCGC	2 cut(s)	1443, 1718
HinP1I	GCGC	2 cut(s)	1443, 1718
HincII	GTYRAC	3 cut(s)	385, 2539, 2634
HindII	GTYRAC	3 cut(s)	385, 2539, 2634
HindIII	AAGCTT	4 cut(s)	1388, 1892, 2528, 3151
HpaI	GTTAAC	2 cut(s)	2539, 2634
HpaII	CCGG	2 cut(s)	1327, 1428
Hpy166II	GTNNAC	8 cut(s)	385, 668, 1141, 1834, 2373, 2539, 2634, 3273
Hpy8I	GTNNAC	8 cut(s)	385, 668, 1141, 1834, 2373, 2539, 2634, 3273
Hpy99I	CGWCG	4 cut(s)	10, 13, 2211, 3189
HpyCH4IV	ACGT	6 cut(s)	1723, 2261, 2365, 2751, 3184, 3236
HpyF10VI	GCNNNNNNNGC	5 cut(s)	2051, 2684, 3159, 3186, 3264
HpySE526I	ACGT	6 cut(s)	1723, 2261, 2365, 2751, 3184, 3236
HspAI	GCGC	2 cut(s)	1443, 1718
Ksp22I	TGATCA	3 cut(s)	607, 1776, 2344
KspAI	GTTAAC	2 cut(s)	2539, 2634
LguI	GCTCTTC	1 cut(s)	1244
LmnI	GCTCC	3 cut(s)	1156, 2344, 2605
Lsp1109I	GCAGC	2 cut(s)	1727, 2444
MaeII	ACGT	6 cut(s)	1723, 2261, 2365, 2751, 3184, 3236
MaeIII	GTNAC	7 cut(s)	104, 213, 403, 2697, 2704, 2866, 3237
MfeI	CAATTG	1 cut(s)	2333
MflI	RGATCY	8 cut(s)	229, 298, 320, 1330, 1971, 2029, 2416, 3278
MhlI	GDGCHC	2 cut(s)	245, 1143
MlsI	TGGCCA	1 cut(s)	2820
MluNI	TGGCCA	1 cut(s)	2820
MlyI	GAGTC	9 cut(s)	169, 400, 739, 1058, 1303, 1762, 1933, 2705, 2995
MmeI	TCCRAC	1 cut(s)	1664
Mox20I	TGGCCA	1 cut(s)	2820
Mph1103I	ATGCAT	2 cut(s)	153, 1888
MroXI	GAANNNNTTC	3 cut(s)	1030, 1098, 2446
MscI	TGGCCA	1 cut(s)	2820
MslI	CAYNNNNRTG	2 cut(s)	1260, 1843
Msp20I	TGGCCA	1 cut(s)	2820
MspA1I	CMGCKG	4 cut(s)	1951, 2284, 2435, 2495
MspCI	CTTAAG	2 cut(s)	2255, 3242
MspI	CCGG	2 cut(s)	1327, 1428
MspR9I	CCNGG	1 cut(s)	1328
MunI	CAATTG	1 cut(s)	2333
Mva1269I	GAATGC	1 cut(s)	1693
MvnI	CGCG	1 cut(s)	2324
MwoI	GCNNNNNNNGC	5 cut(s)	2051, 2684, 3159, 3186, 3264
NciI	CCSGG	1 cut(s)	1328
NcoI	CCATGG	1 cut(s)	1479
NlaIV	GGNNCC	6 cut(s)	1426, 1563, 1790, 2340, 2418, 2938
NmeAIII	GCCGAG	2 cut(s)	1246, 3130
NmuCI	GTSAC	4 cut(s)	213, 403, 2697, 2704
NsiI	ATGCAT	2 cut(s)	153, 1888
NspV	TTCGAA	1 cut(s)	992
PciSI	GCTCTTC	1 cut(s)	1244
PcsI	WCGNNNNNNNCGW	1 cut(s)	58
PctI	GAATGC	1 cut(s)	1693
PdmI	GAANNNNTTC	3 cut(s)	1030, 1098, 2446
PfeI	GAWTC	9 cut(s)	476, 904, 989, 1199, 1345, 2077, 2574, 2873, 3040
PflFI	GACNNNGTC	1 cut(s)	601
PfoI	TCCNGGA	1 cut(s)	1326
PkrI	GCNGC	4 cut(s)	1717, 2323, 2434, 3260
PleI	GAGTC	9 cut(s)	168, 400, 738, 1058, 1302, 1761, 1933, 2704, 2994
PpsI	GAGTC	9 cut(s)	168, 400, 738, 1058, 1302, 1761, 1933, 2704, 2994
PpuMI	RGGWCCY	1 cut(s)	1562
PsiI	TTATAA	1 cut(s)	2562
Psp1406I	AACGTT	1 cut(s)	2365
Psp5II	RGGWCCY	1 cut(s)	1562
PspN4I	GGNNCC	6 cut(s)	1426, 1563, 1790, 2340, 2418, 2938
PspPI	GGNCC	3 cut(s)	428, 1415, 1562
PspPPI	RGGWCCY	1 cut(s)	1562
PstI	CTGCAG	2 cut(s)	2056, 2380
PstNI	CAGNNNCTG	4 cut(s)	1348, 1996, 2060, 2384
PsuI	RGATCY	8 cut(s)	229, 298, 320, 1330, 1971, 2029, 2416, 3278
PsyI	GACNNNGTC	1 cut(s)	601
PvuII	CAGCTG	3 cut(s)	1951, 2284, 2435
RsaI	GTAC	1 cut(s)	1356
RsaNI	GTAC	1 cut(s)	1355
RseI	CAYNNNNRTG	2 cut(s)	1260, 1843
SapI	GCTCTTC	1 cut(s)	1244
SatI	GCNGC	4 cut(s)	1716, 2322, 2433, 3259
Sau96I	GGNCC	3 cut(s)	428, 1415, 1562
SchI	GAGTC	9 cut(s)	169, 400, 739, 1058, 1303, 1762, 1933, 2705, 2995
ScrFI	CCNGG	1 cut(s)	1328
SduI	GDGCHC	2 cut(s)	245, 1143
SfcI	CTRYAG	2 cut(s)	2052, 2376
SfuI	TTCGAA	1 cut(s)	992
SinI	GGWCC	3 cut(s)	428, 1415, 1562
SmiMI	CAYNNNNRTG	2 cut(s)	1260, 1843
SmlI	CTYRAG	7 cut(s)	837, 1066, 1184, 2255, 2693, 3172, 3242
SmoI	CTYRAG	7 cut(s)	837, 1066, 1184, 2255, 2693, 3172, 3242
SpeI	ACTAGT	1 cut(s)	1108
SsiI	CCGC	5 cut(s)	719, 959, 2322, 2493, 3258
StyD4I	CCNGG	1 cut(s)	1326
StyI	CCWWGG	1 cut(s)	1479
TaiI	ACGT	6 cut(s)	1726, 2264, 2368, 2754, 3187, 3239
TaqI	TCGA	8 cut(s)	61, 992, 1273, 1711, 1751, 2206, 2533, 2835
TauI	GCSGC	2 cut(s)	2324, 3261
TfiI	GAWTC	9 cut(s)	476, 904, 989, 1199, 1345, 2077, 2574, 2873, 3040
TscAI	CASTG	2 cut(s)	2380, 2389
TseFI	GTSAC	4 cut(s)	213, 403, 2697, 2704
TseI	GCWGC	2 cut(s)	1715, 2432
Tsp45I	GTSAC	4 cut(s)	213, 403, 2697, 2704
TspDTI	ATGAA	7 cut(s)	122, 642, 917, 1614, 1636, 1908, 2031
TspGWI	ACGGA	4 cut(s)	67, 760, 2619, 3069
TspRI	CASTG	2 cut(s)	2380, 2389
Tth111I	GACNNNGTC	1 cut(s)	601
Vha464I	CTTAAG	2 cut(s)	2255, 3242
VneI	GTGCAC	1 cut(s)	1139
VpaK11BI	GGWCC	3 cut(s)	428, 1415, 1562
XapI	RAATTY	5 cut(s)	63, 924, 1796, 2505, 2654
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1418
XmiI	GTMKAC	1 cut(s)	3272
XmnI	GAANNNNTTC	3 cut(s)	1030, 1098, 2446
Zsp2I	ATGCAT	2 cut(s)	153, 1888

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.