Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0005890

Physical Location & Seq

Genomic Coordinates Reverse (-)

86496506 .. 86504783

Gene Structure 8278 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00064670.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1800 bp

ATGAGTATTTCCCAGCTGCCATCACAGTACAGAGTGTTCATCTTCGATGACTGTGATACTTTATCCCAGGAGTGCTGGAGTGCCATATCAAAGGTCATTGATCGAGCACCCAGACGTGTGGTTTTTGTCCTTGTCTGTTCGAGTCTTGATGTTTTGCCTCACATAATCATATCCAGGTGTCAGAAATTCTTTTTCCCAAAGGTAAAGGATGCAGACATTATATACACTTTGCAATGGATTGCAACCAAAGACGACTTAGAAATTGACAAGGATGCACTGAAACTTATTGCGTCAAGATCAGATGGTTCATTGAGGGATGCTGAGATGACTCTAGAGCAACTGAGTTTGCTTGGCCAGAGAATCTCTGTTCCTCTAGTTCAGGAACTAGTTGGGCTTATCTCTGATGAGAGATTGGTGGATCTGCTTGATTTAGCATTGTCTGCAGACACAGTTAATACTGTGAAGAATTTGAGAGTGATAATGGAAAGTGGTGTTGAGCCATTAGCCTTGATGTCACAACTTGCAACAGTCATTACAGATATACTTGCTGGCAGCTATGATTATACCAAAGAAGGGCGTAGAAGGAAGTTCTTTCGGCACCAACCATTATCAAAAGAAGACATGGAAAAACTGCGTCAAGCTTTGAAAACTTTATCCGAGGCTGAAAAGCAATTGAGGACATCAAATGACAAGTTAACATGGCTAACGGCTGCGCTTCTCCAACTTGCTCCTGATCAGCAGTACATGTTGCCTAGTTCTTCTGCAGGCACTAGCAATCACAGTCCTTTGGCCTTAAATAATGCTGGTGTAAGGGATGTTCCTAGTTATGACAGAGGCTTGCCAACAAATGTTAAAAATGTTGGAAGTTCCAGTTTCTATGGCAATGGCTCAGTAAAAGTTAGAAGTGTAGATAGAAAAAGTCATACTGGGGATGGTATGGCTATAGCTACAAACTCTGCTGACATAGTAAAAGGGAGTGGGAGGAATAATGTTGACAGAAGCTATAAATCAATTGAAGAAATTTGGTTGGAGGTGCTTGAGAAAATTCCATATAATCGCATAAAAGAGTTTTTGTACCAAGAAGGGAAGCTAATATCAGTCAGTTTTGGTGCAGCTCCCACTGTGCAGTTGATGTTCTCTTCGCATATGACTAAATCTACAGCAGAGAAGTTTAGAGCACAGATATTACAGGCGTTTGAGATGGTTCTCGGGTCTCCCCTGACAGTTGAAATAAGATGTCTATCAAAAAAAGATACCAAGGAAGGGGCCCAGAAGCCTATTATCATACCAGCTTCTAAGGATGGTTTGTCCCAGATTAGAGATAAAAATAGTGTCATCACAGATGCCCAGCACCTACACCCTGACACCCGCGAAATGGGGAAGAGTGAAATTGTTGAGGTAGCTGCTTCTCCTAGGGAAGGCGAGGGTAGTGGTCAGATCGATAACCACAAAGAATCTAGCGCACGGAGGGGAGAAGCATCTATAAAACATAGAGTTGGGGAACAAAGTCAGAGTCAAAGCCTTGTCAGAGGCAAGGTGTCCCTCGCACATGTAATTCAACAGGCAGAAGGATGCTCACAGCTCAGTGGATGGTCACAACGCAAAGCAGTTTCTATTGCTGAAAAGCTTGAACAAGATAATCTGAGATTGGAATCTCAATCGAGAAGTTTGATTTGCTGGAAAGCATCCAGAGTGGCTCGTCGAAAGCTTTCACGTTTGAAAATGAGGAAAAGGAGACCACATTCACTGCTGGAGCTTGTTTCCTGTGGCAAGTGCCTCTCTTCAAGATCTCCAAGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005657 GO:0005663 GO:0005694 GO:0005886 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006281 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0016020 GO:0032991 GO:0033554 GO:0034641 GO:0034645 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0046483 GO:0050896 GO:0051716 GO:0071704 GO:0071944 GO:0090304 GO:1901360 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DNA_pol3_delta2 DNA_pol3_gamma3

Protein Analysis

599

Amino Acids

66.72

Weight (kDa)

9.27

Isoelectric Point (pI)

48.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DNA_pol3_delta2	PF13177	4 - 68	2.8e-06	DNA polymerase III, delta subunit
DNA_pol3_gamma3	PF12169	124 - 248	5.5e-07	DNA polymerase III subunits gamma and tau domain III
DnaA_N-like_STI	PF23007	333 - 413	8.6e-29	STICHEL, DnaA_N-like alpha-beta domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005890)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G18820
fragaria_vesca	FvH4_3g07230 FvH4_3g07230 FvH4_3g07230 FvH4_3g07230 FvH4_3g07230 FvH4_3g07230 FvH4_3g07230 FvH4_3g07230
malus_domestica	MD00G1008200.v1.1 MD10G1274700.v1.1
prunus_persica	Prupe.4G067700_v2.0.a1 Prupe.4G067700_v2.0.a1 Prupe.4G067700_v2.0.a1 Prupe.4G067700_v2.0.a1
pyrus_communis	pycom05g27350 pycom10g22920
rosa_chinensis	RchiOBHm_Chr5g0011921
rosa_laevigata	RLG00000031869
rosa_multiflora	Rmu_sc0001475.1_g000004
rosa_roxburghii	Rroxscaffold_1G00064670
rosa_rugosa	Rorug04G0460000 Rorug04G0460100
rosa_samantha	Rh5AG091500 Rh5BG087300 Rh5CG101200 Rh5DG087900
rosa_wichuraiana	Rw5G007980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	597
AccII	CGCG	1 cut(s)	1371
AciI	CCGC	1 cut(s)	1369
AclWI	GGATC	1 cut(s)	426
AcoI	YGGCCR	1 cut(s)	352
AcsI	RAATTY	4 cut(s)	185, 466, 1020, 1044
AfaI	GTAC	3 cut(s)	29, 743, 1076
AfiI	CCNNNNNNNGG	4 cut(s)	573, 1263, 1375, 1418
AflIII	ACRYGT	3 cut(s)	115, 744, 1549
AgsI	TTSAA	7 cut(s)	646, 1016, 1229, 1559, 1631, 1720, 1785
AhlI	ACTAGT	1 cut(s)	385
AjiI	CACGTC	1 cut(s)	116
AjnI	CCWGG	2 cut(s)	66, 173
Alw21I	GWGCWC	2 cut(s)	109, 1180
Alw26I	GTCTC	2 cut(s)	1218, 1729
AlwI	GGATC	1 cut(s)	426
Ama87I	CYCGRG	1 cut(s)	1208
AoxI	GGCC	3 cut(s)	352, 789, 1266
ApaI	GGGCCC	1 cut(s)	1270
ApeKI	GCWGC	5 cut(s)	16, 552, 710, 1112, 1403
ApoI	RAATTY	4 cut(s)	185, 466, 1020, 1044
ArsI	GACNNNNNNTTYG	2 cut(s)	1498, 1530
Asp700I	GAANNNNTTC	1 cut(s)	1708
AspA2I	CCTAGG	1 cut(s)	1412
AspLEI	GCGC	2 cut(s)	715, 1463
AspS9I	GGNCC	2 cut(s)	1266, 1267
AvaI	CYCGRG	1 cut(s)	1208
AvrII	CCTAGG	1 cut(s)	1412
BaeGI	GKGCMC	1 cut(s)	1270
BalI	TGGCCA	1 cut(s)	354
BanI	GGYRCC	1 cut(s)	597
BanII	GRGCYC	1 cut(s)	1270
BbsI	GAAGAC	1 cut(s)	624
Bbv12I	GWGCWC	2 cut(s)	109, 1180
BbvI	GCAGC	5 cut(s)	3, 564, 697, 1124, 1390
BccI	CCATC	6 cut(s)	28, 296, 926, 1195, 1295, 1584
BceAI	ACGGC	1 cut(s)	723
BciT130I	CCWGG	2 cut(s)	68, 175
BclI	TGATCA	1 cut(s)	733
BcoDI	GTCTC	2 cut(s)	1218, 1729
BcuI	ACTAGT	1 cut(s)	385
BfaI	CTAG	8 cut(s)	332, 374, 386, 753, 771, 822, 1413, 1458
BfmI	CTRYAG	4 cut(s)	441, 762, 942, 1158
BglII	AGATCT	1 cut(s)	1787
BisI	GCNGC	5 cut(s)	17, 553, 711, 1113, 1404
BlnI	CCTAGG	1 cut(s)	1412
BlsI	GCNGC	5 cut(s)	18, 554, 712, 1114, 1405
Bme1390I	CCNGG	2 cut(s)	68, 175
BmeT110I	CYCGRG	1 cut(s)	1208
BmgBI	CACGTC	1 cut(s)	116
BmgT120I	GGNCC	2 cut(s)	1266, 1267
BmiI	GGNNCC	3 cut(s)	599, 1267, 1268
BmrFI	CCNGG	2 cut(s)	68, 175
BmrI	ACTGGG	1 cut(s)	936
BmsI	GCATC	7 cut(s)	199, 262, 307, 1333, 1487, 1562, 1694
BmuI	ACTGGG	1 cut(s)	936
BpiI	GAAGAC	1 cut(s)	624
BpmI	CTGGAG	2 cut(s)	97, 1772
BpuEI	CTTGAG	1 cut(s)	1058
Bsa29I	ATCGAT	1 cut(s)	1440
BsaBI	GATNNNNATC	2 cut(s)	1240, 1651
BsaI	GGTCTC	2 cut(s)	1218, 1729
BsaJI	CCNNGG	5 cut(s)	66, 657, 1257, 1412, 1793
Bsc4I	CCNNNNNNNGG	4 cut(s)	573, 1263, 1375, 1418
Bse1I	ACTGG	2 cut(s)	870, 931
Bse3DI	GCAATG	2 cut(s)	239, 889
Bse8I	GATNNNNATC	2 cut(s)	1240, 1651
BseBI	CCWGG	2 cut(s)	68, 175
BseCI	ATCGAT	1 cut(s)	1440
BseDI	CCNNGG	5 cut(s)	66, 657, 1257, 1412, 1793
BseGI	GGATG	9 cut(s)	214, 277, 322, 820, 937, 1306, 1577, 1595, 1685
BseJI	GATNNNNATC	2 cut(s)	1240, 1651
BseLI	CCNNNNNNNGG	4 cut(s)	573, 1263, 1375, 1418
BseMI	GCAATG	2 cut(s)	239, 889
BseMII	CTCAG	5 cut(s)	312, 332, 903, 1597, 1634
BseNI	ACTGG	2 cut(s)	870, 931
BseSI	GKGCMC	1 cut(s)	1270
BseXI	GCAGC	5 cut(s)	3, 564, 697, 1124, 1390
BseYI	CCCAGC	2 cut(s)	12, 1347
BsgI	GTGCAG	2 cut(s)	1131, 1145
Bsh1236I	CGCG	1 cut(s)	1371
BshFI	GGCC	3 cut(s)	354, 791, 1268
BshNI	GGYRCC	1 cut(s)	597
BshVI	ATCGAT	1 cut(s)	1440
BsiHKAI	GWGCWC	2 cut(s)	109, 1180
BsiHKCI	CYCGRG	1 cut(s)	1208
BslFI	GGGAC	2 cut(s)	1294, 1525
BslI	CCNNNNNNNGG	4 cut(s)	573, 1263, 1375, 1418
BsmAI	GTCTC	2 cut(s)	1218, 1729
BsmFI	GGGAC	2 cut(s)	1294, 1525
BsnI	GGCC	3 cut(s)	354, 791, 1268
Bso31I	GGTCTC	2 cut(s)	1218, 1729
BsoBI	CYCGRG	1 cut(s)	1208
Bsp120I	GGGCCC	1 cut(s)	1266
Bsp1286I	GDGCHC	3 cut(s)	109, 1180, 1270
Bsp143I	GATC	6 cut(s)	100, 296, 418, 733, 1437, 1787
BspACI	CCGC	1 cut(s)	1369
BspANI	GGCC	3 cut(s)	354, 791, 1268
BspCNI	CTCAG	5 cut(s)	313, 333, 902, 1596, 1635
BspDI	ATCGAT	1 cut(s)	1440
BspFNI	CGCG	1 cut(s)	1371
BspLI	GGNNCC	3 cut(s)	599, 1267, 1268
BspMAI	CTGCAG	2 cut(s)	445, 766
BspPI	GGATC	1 cut(s)	426
BspT107I	GGYRCC	1 cut(s)	597
BspTNI	GGTCTC	2 cut(s)	1218, 1729
BsrDI	GCAATG	2 cut(s)	239, 889
BsrI	ACTGG	2 cut(s)	870, 931
BssECI	CCNNGG	5 cut(s)	66, 657, 1257, 1412, 1793
BssMI	GATC	6 cut(s)	100, 296, 418, 733, 1437, 1787
BssT1I	CCWWGG	3 cut(s)	1257, 1412, 1793
Bst2UI	CCWGG	2 cut(s)	68, 175
Bst4CI	ACNGT	8 cut(s)	27, 53, 451, 460, 529, 782, 1123, 1225
Bst6I	CTCTTC	3 cut(s)	1144, 1376, 1786
BstAPI	GCANNNNNTGC	1 cut(s)	440
BstC8I	GCNNGC	3 cut(s)	550, 766, 839
BstDEI	CTNAG	7 cut(s)	256, 321, 341, 889, 1296, 1583, 1643
BstENI	CCTNNNNNAGG	1 cut(s)	1416
BstF5I	GGATG	9 cut(s)	214, 277, 322, 820, 937, 1306, 1577, 1595, 1685
BstFNI	CGCG	1 cut(s)	1371
BstHHI	GCGC	2 cut(s)	715, 1463
BstKTI	GATC	6 cut(s)	103, 299, 421, 736, 1440, 1790
BstMAI	GTCTC	2 cut(s)	1218, 1729
BstMBI	GATC	6 cut(s)	100, 296, 418, 733, 1437, 1787
BstMWI	GCNNNNNNNGC	1 cut(s)	440
BstNI	CCWGG	2 cut(s)	68, 175
BstNSI	RCATGY	2 cut(s)	748, 1553
BstSCI	CCNGG	2 cut(s)	66, 173
BstSFI	CTRYAG	4 cut(s)	441, 762, 942, 1158
BstSLI	GKGCMC	1 cut(s)	1270
BstUI	CGCG	1 cut(s)	1371
BstV1I	GCAGC	5 cut(s)	3, 564, 697, 1124, 1390
BstV2I	GAAGAC	1 cut(s)	624
BstX2I	RGATCY	2 cut(s)	418, 1787
BstXI	CCANNNNNNTGG	1 cut(s)	118
BstYI	RGATCY	2 cut(s)	418, 1787
Bsu15I	ATCGAT	1 cut(s)	1440
BsuRI	GGCC	3 cut(s)	354, 791, 1268
BsuTUI	ATCGAT	1 cut(s)	1440
BtrI	CACGTC	1 cut(s)	116
BtsCI	GGATG	9 cut(s)	214, 277, 322, 820, 937, 1306, 1577, 1595, 1685
BtsI	GCAGTG	1 cut(s)	1745
BtsIMutI	CAGTG	4 cut(s)	275, 1119, 1591, 1745
Cac8I	GCNNGC	3 cut(s)	550, 766, 839
CfoI	GCGC	2 cut(s)	715, 1463
Cfr13I	GGNCC	2 cut(s)	1266, 1267
ClaI	ATCGAT	1 cut(s)	1440
CseI	GACGC	2 cut(s)	279, 623
Csp6I	GTAC	3 cut(s)	28, 742, 1075
CviAII	CATG	4 cut(s)	622, 699, 745, 1550
CviQI	GTAC	3 cut(s)	28, 742, 1075
DdeI	CTNAG	7 cut(s)	256, 321, 341, 889, 1296, 1583, 1643
DpnI	GATC	6 cut(s)	102, 298, 420, 735, 1439, 1789
DpnII	GATC	6 cut(s)	100, 296, 418, 733, 1437, 1787
EaeI	YGGCCR	1 cut(s)	352
Eam1104I	CTCTTC	3 cut(s)	1144, 1376, 1786
EarI	CTCTTC	3 cut(s)	1144, 1376, 1786
Eco130I	CCWWGG	3 cut(s)	1257, 1412, 1793
Eco24I	GRGCYC	1 cut(s)	1270
Eco31I	GGTCTC	2 cut(s)	1218, 1729
Eco88I	CYCGRG	1 cut(s)	1208
EcoNI	CCTNNNNNAGG	1 cut(s)	1416
EcoO109I	RGGNCCY	1 cut(s)	1266
EcoRII	CCWGG	2 cut(s)	66, 173
EcoT14I	CCWWGG	3 cut(s)	1257, 1412, 1793
EcoT38I	GRGCYC	1 cut(s)	1270
ErhI	CCWWGG	3 cut(s)	1257, 1412, 1793
FaeI	CATG	4 cut(s)	625, 702, 748, 1553
FaqI	GGGAC	2 cut(s)	1294, 1525
FatI	CATG	4 cut(s)	621, 698, 744, 1549
FauI	CCCGC	1 cut(s)	1376
FauNDI	CATATG	1 cut(s)	1146
FbaI	TGATCA	1 cut(s)	733
Fnu4HI	GCNGC	5 cut(s)	17, 553, 711, 1113, 1404
FokI	GGATG	9 cut(s)	221, 284, 329, 827, 944, 1313, 1584, 1602, 1672
FriOI	GRGCYC	1 cut(s)	1270
Fsp4HI	GCNGC	5 cut(s)	17, 553, 711, 1113, 1404
FspBI	CTAG	8 cut(s)	332, 374, 386, 753, 771, 822, 1413, 1458
GlaI	GCGC	2 cut(s)	714, 1462
GluI	GCNGC	5 cut(s)	17, 553, 711, 1113, 1404
GsaI	CCCAGC	2 cut(s)	16, 1351
GsuI	CTGGAG	2 cut(s)	97, 1772
HaeIII	GGCC	3 cut(s)	354, 791, 1268
HgaI	GACGC	2 cut(s)	279, 623
HhaI	GCGC	2 cut(s)	715, 1463
Hin1II	CATG	4 cut(s)	625, 702, 748, 1553
Hin6I	GCGC	2 cut(s)	713, 1461
HinP1I	GCGC	2 cut(s)	713, 1461
HincII	GTYRAC	2 cut(s)	696, 994
HindII	GTYRAC	2 cut(s)	696, 994
HindIII	AAGCTT	3 cut(s)	639, 1625, 1706
HinfI	GANTC	6 cut(s)	142, 328, 360, 1454, 1513, 1652
HpaI	GTTAAC	1 cut(s)	696
Hpy166II	GTNNAC	2 cut(s)	696, 994
Hpy188I	TCNGA	8 cut(s)	183, 301, 403, 658, 1437, 1512, 1529, 1644
Hpy188III	TCNNGA	8 cut(s)	146, 294, 332, 380, 731, 1662, 1689, 1785
Hpy8I	GTNNAC	2 cut(s)	696, 994
Hpy99I	CGWCG	1 cut(s)	1704
HpyAV	CCTTC	6 cut(s)	566, 576, 1076, 1256, 1412, 1562
HpyCH4III	ACNGT	8 cut(s)	27, 53, 451, 460, 529, 782, 1123, 1225
HpyCH4IV	ACGT	2 cut(s)	115, 1714
HpyCH4V	TGCA	9 cut(s)	212, 232, 242, 275, 443, 524, 764, 1112, 1126
HpyF10VI	GCNNNNNNNGC	1 cut(s)	440
HpyF3I	CTNAG	7 cut(s)	256, 321, 341, 889, 1296, 1583, 1643
HpySE526I	ACGT	2 cut(s)	115, 1714
Hsp92II	CATG	4 cut(s)	625, 702, 748, 1553
HspAI	GCGC	2 cut(s)	713, 1461
Ksp22I	TGATCA	1 cut(s)	733
KspAI	GTTAAC	1 cut(s)	696
Kzo9I	GATC	6 cut(s)	100, 296, 418, 733, 1437, 1787
LmnI	GCTCC	3 cut(s)	733, 1120, 1753
Lsp1109I	GCAGC	5 cut(s)	3, 564, 697, 1124, 1390
LweI	GCATC	7 cut(s)	199, 262, 307, 1333, 1487, 1562, 1694
MaeI	CTAG	8 cut(s)	332, 374, 386, 753, 771, 822, 1413, 1458
MaeII	ACGT	2 cut(s)	115, 1714
MaeIII	GTNAC	2 cut(s)	513, 1593
MalI	GATC	6 cut(s)	102, 298, 420, 735, 1439, 1789
MboI	GATC	6 cut(s)	100, 296, 418, 733, 1437, 1787
MboII	GAAGA	8 cut(s)	34, 475, 629, 750, 1028, 1131, 1393, 1773
MfeI	CAATTG	2 cut(s)	671, 1011
MflI	RGATCY	2 cut(s)	418, 1787
MhlI	GDGCHC	3 cut(s)	109, 1180, 1270
MlsI	TGGCCA	1 cut(s)	354
MluCI	AATT	9 cut(s)	185, 261, 466, 671, 1011, 1020, 1044, 1389, 1554
MluNI	TGGCCA	1 cut(s)	354
MlyI	GAGTC	3 cut(s)	151, 322, 1522
MmeI	TCCRAC	3 cut(s)	745, 841, 1008
Mox20I	TGGCCA	1 cut(s)	354
MroXI	GAANNNNTTC	1 cut(s)	1708
MscI	TGGCCA	1 cut(s)	354
MseI	TTAA	4 cut(s)	453, 695, 794, 852
Msp20I	TGGCCA	1 cut(s)	354
MspA1I	CMGCKG	1 cut(s)	16
MspR9I	CCNGG	2 cut(s)	68, 175
MunI	CAATTG	2 cut(s)	671, 1011
MvaI	CCWGG	2 cut(s)	68, 175
MvnI	CGCG	1 cut(s)	1371
MwoI	GCNNNNNNNGC	1 cut(s)	440
NdeI	CATATG	1 cut(s)	1146
NdeII	GATC	6 cut(s)	100, 296, 418, 733, 1437, 1787
NlaIII	CATG	4 cut(s)	625, 702, 748, 1553
NlaIV	GGNNCC	3 cut(s)	599, 1267, 1268
NmuCI	GTSAC	2 cut(s)	513, 1593
NspI	RCATGY	2 cut(s)	748, 1553
PciI	ACATGT	2 cut(s)	744, 1549
PdmI	GAANNNNTTC	1 cut(s)	1708
PfeI	GAWTC	3 cut(s)	360, 1454, 1652
PkrI	GCNGC	5 cut(s)	18, 554, 712, 1114, 1405
PleI	GAGTC	3 cut(s)	150, 322, 1521
PpsI	GAGTC	3 cut(s)	150, 322, 1521
PscI	ACATGT	2 cut(s)	744, 1549
Psp6I	CCWGG	2 cut(s)	66, 173
PspFI	CCCAGC	2 cut(s)	12, 1347
PspGI	CCWGG	2 cut(s)	66, 173
PspN4I	GGNNCC	3 cut(s)	599, 1267, 1268
PspOMI	GGGCCC	1 cut(s)	1266
PspPI	GGNCC	2 cut(s)	1266, 1267
PsrI	GAACNNNNNNTAC	4 cut(s)	20, 52, 801, 833
PstI	CTGCAG	2 cut(s)	445, 766
PsuI	RGATCY	2 cut(s)	418, 1787
PvuII	CAGCTG	1 cut(s)	16
RsaI	GTAC	3 cut(s)	29, 743, 1076
RsaNI	GTAC	3 cut(s)	28, 742, 1075
SaqAI	TTAA	4 cut(s)	453, 695, 794, 852
SatI	GCNGC	5 cut(s)	17, 553, 711, 1113, 1404
Sau3AI	GATC	6 cut(s)	100, 296, 418, 733, 1437, 1787
Sau96I	GGNCC	2 cut(s)	1266, 1267
SchI	GAGTC	3 cut(s)	151, 322, 1522
ScrFI	CCNGG	2 cut(s)	68, 175
SduI	GDGCHC	3 cut(s)	109, 1180, 1270
SfaNI	GCATC	7 cut(s)	199, 262, 307, 1333, 1487, 1562, 1694
SfcI	CTRYAG	4 cut(s)	441, 762, 942, 1158
SmlI	CTYRAG	1 cut(s)	1037
SmoI	CTYRAG	1 cut(s)	1037
SpeI	ACTAGT	1 cut(s)	385
Sse9I	AATT	9 cut(s)	185, 261, 466, 671, 1011, 1020, 1044, 1389, 1554
SsiI	CCGC	1 cut(s)	1369
SspMI	CTAG	8 cut(s)	332, 374, 386, 753, 771, 822, 1413, 1458
StyD4I	CCNGG	2 cut(s)	66, 173
StyI	CCWWGG	3 cut(s)	1257, 1412, 1793
TaaI	ACNGT	8 cut(s)	27, 53, 451, 460, 529, 782, 1123, 1225
TaiI	ACGT	2 cut(s)	118, 1717
TaqI	TCGA	6 cut(s)	45, 103, 140, 1440, 1661, 1702
TasI	AATT	9 cut(s)	185, 261, 466, 671, 1011, 1020, 1044, 1389, 1554
TatI	WGTACW	2 cut(s)	27, 741
TfiI	GAWTC	3 cut(s)	360, 1454, 1652
Tru1I	TTAA	4 cut(s)	453, 695, 794, 852
Tru9I	TTAA	4 cut(s)	453, 695, 794, 852
TscAI	CASTG	4 cut(s)	282, 1126, 1591, 1752
TseFI	GTSAC	2 cut(s)	513, 1593
TseI	GCWGC	5 cut(s)	16, 552, 710, 1112, 1403
Tsp45I	GTSAC	2 cut(s)	513, 1593
TspDTI	ATGAA	2 cut(s)	28, 297
TspGWI	ACGGA	1 cut(s)	1480
TspRI	CASTG	4 cut(s)	282, 1126, 1591, 1752
XagI	CCTNNNNNAGG	1 cut(s)	1416
XapI	RAATTY	4 cut(s)	185, 466, 1020, 1044
XbaI	TCTAGA	1 cut(s)	331
XceI	RCATGY	2 cut(s)	748, 1553
XmaJI	CCTAGG	1 cut(s)	1412
XmnI	GAANNNNTTC	1 cut(s)	1708
XspI	CTAG	8 cut(s)	332, 374, 386, 753, 771, 822, 1413, 1458

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.