Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0005890

Physical Location & Seq

Genomic Coordinates Reverse (-)

28336252 .. 28339513

Gene Structure 3262 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g27350.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2442 bp

ATGACTAGGGCTGTTCGCAATAGGATACTCAAGGATGCGAATGGTGATACTAGTGATCATCTGCGCAACCACATCCATTTGACAAATTGCATTCACTTGAAGAACCATATGCACAAGCAAAGCCCCATATTGGCTGACAGGTCACTTATGAGGGACCTTGTTGTCCTTCAGAGGTCGCGATCTCTCAGGGACCCTTCTGCCAGTCCGCCCTCATGGCATTCGCCTTCCATTCTTGATATGCTTTCCAGAAGAGGTGAAAATGATGCCTTGGTGCGTGAGGGGAGAAGGTCAGTAGGAAGTGAGTATCGAAGGGATGCCAGGAGGCTATCAACAGGTTCTCCACCTTTGGCAAGTTTAGCGACACCAAAAGTTGCTCAACGTGGGGCTAATGGGGGAAATGATGGTGTGGCCGGAACCAGTGAACATGGAAGCAAGAGTGGAGTTAGGGATGGTAGGAAAATTAGGAGAGAAGAATCTAGTCAGAAGAGTAAAAGGAGTGAAAGTTTGGGTGGCAATGAGGAGCCTCCGCCAGACCAGAATGGTAACGATTTGACTCATGATGCTCTTTCTGGGAATTCAGAATCCAAAAGTAGAAAAAGTAAACAAAAGGGAAAGCACACCCAAGGTGCTCGAATGAAGACTCTCTCAGAGCAATTGAATGATGGTAGGATGGATACTGATGATGTAGCGTCCTCTAATATCCACCTGCCTGGAAGACGGTCCCGGCAGGGAAGAATCTCTGAGGAACCGGAGGTCAGCGCTCGGGGCTATTGCAGTGGACTAAGTAGAGTAAAAAGGCGGAGATTACGAGGTGCAAGAAGAAGCCGTGCTTCTGTAGCGTCCAGAGACTTTGGACCTCAGCATGGTTTATCTGTAGCTTCTAATTCTATAGCTCAAGGGTCAGCTCACCGAAAGTATCACATGGAACAGGGAGCGGATGAGTATGGTGAGCAAAATGTCACAAGGGCTCCTAGAAACGGGTGTGGGATTCCCTGGAATTGGTCGAGAATCCATCATAGAGGTAAAACATTCCTTGACATTGCTGGAAGGAGCATTTCTTGTGGTTTATCTGATTCAAGGTTTAAGAAGGGTGGTCTGGCTGCCCATGGTAGAGATATTTCTGACATGCCCATGGCAACTGATAACTCGAGCGTTTCTACTAAATCTGAATCTGAGGCACTTCCCTTACTAGTTGAAGCATCTGGATCAAAGGTAAGCTCTGACAATGCTGGTTGGGTACATGACTATTCTGGTGAACTTGGTATTTATGCCGATAATTTATTCAAGCATGACGTCGGTTCCGACTATGCTTCTGAAGCTAGATCTGGTGATCAACGCAAATTGAGGGGACACCGCCGTTGTAGGCACCAAAATCTGACGCAAAAATACATGCCGAGAACCTTTAGAGATCTTGTGGGGCAGAATTTGGTGGCACAAGCTCTTTCAAATGCTGTCATGAAAAAGAAAGTTGGGTTGCTATACGTGTTCTATGGTCCTCATGGCACAGGGAAAACATCATGTGCTCGCATATTTTCTAGAGCTCTAAATTGCCAGTCTGTGGATCATCCCAAGCCTTGTGGCTTTTGCAATTCTTGCATCGCACATGATATGGGCAAGAGTAGAAATATAAAGGAAGTTGGGCCTGTTAGTAACTTCGACTTCGATAGCATTATGGATCTACTTGACAATATGAGTATTTCCCAACTGCCATCACAGTACAGAGTGTTTATCTTTGATGATTGTGATACATTGTCCCCTGAGTGCTGCAGTGCCTTATCGAAGGTCATTGATCGAGCACCCAGACATGTGGTTTTTGTCCTTGTCTGTTCAAGTCTTGATGTTTTGCCTCACATAATCATATCCAGGTGTCAAAAGTTCTTTTTCCCTAAGCTAAGGGATGCAGATATTATTTACAGTTTGCAATGGATAGCAGCCAAAGAAGATCTAGAAATTGACAATGATGCACTGAAACTTATTTCGTCAACGTCAGATGGTTCATTGAGGGATGCTGAGATGACTCTAGAGCAACTGAGTTTACTTGGCCAGAGAATCTCAGTTCCTCTTGTTCAGGAACTGGTTGGGCTTATATCTGATGAGAAATTGATAGATCTTCTTGATTTATCATTATCTGCAGACACAGTTAATACTGTGAAGAATTTGAGAATGATAATGGAAAGTGGAGTTGAGCCATTAGCTTTGATGTCACAACTTGCAACGGTGATTACAGATATACTTGCTGGCAGCTATGATTATAGAAAAGAAAGGCGTAGAAGGAAGTTCTTTCGGAACCAACCATTATCAAAAGAAGACATGGAGAAGTTGCGTCAAGCTTTGAAAACTTTATCTGAGGCCGAGAAACAATTGAGGATGTCAAATGACAAGTTAACATGGCTAACCGCTGCACTTCTCCAATTTGCTCGATCAACAGTATATGTTGCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005657 GO:0005663 GO:0005694 GO:0005886 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006281 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009987 GO:0016020 GO:0032991 GO:0033554 GO:0034641 GO:0034645 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044446 GO:0044464 GO:0046483 GO:0050896 GO:0051716 GO:0071704 GO:0071944 GO:0090304 GO:1901360 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DNA_pol3_delta2 DNA_pol3_gamma3

Protein Analysis

814

Amino Acids

90.28

Weight (kDa)

9.5

Isoelectric Point (pI)

53.44

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005890)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G18820
fragaria_vesca	FvH4_3g07230 FvH4_3g07230 FvH4_3g07230 FvH4_3g07230 FvH4_3g07230 FvH4_3g07230 FvH4_3g07230 FvH4_3g07230
malus_domestica	MD00G1008200.v1.1 MD10G1274700.v1.1
prunus_persica	Prupe.4G067700_v2.0.a1 Prupe.4G067700_v2.0.a1 Prupe.4G067700_v2.0.a1 Prupe.4G067700_v2.0.a1
pyrus_communis	pycom05g27350 pycom10g22920
rosa_chinensis	RchiOBHm_Chr5g0011921
rosa_laevigata	RLG00000031869
rosa_multiflora	Rmu_sc0001475.1_g000004
rosa_roxburghii	Rroxscaffold_1G00064670
rosa_rugosa	Rorug04G0460000 Rorug04G0460100
rosa_samantha	Rh5AG091500 Rh5BG087300 Rh5CG101200 Rh5DG087900
rosa_wichuraiana	Rw5G007980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	714
AasI	GACNNNNNNGTC	1 cut(s)	161
AatII	GACGTC	1 cut(s)	1296
Acc16I	TGCGCA	1 cut(s)	65
Acc36I	ACCTGC	1 cut(s)	714
AccB1I	GGYRCC	1 cut(s)	1365
AccB7I	CCANNNNNTGG	1 cut(s)	1558
AccBSI	CCGCTC	1 cut(s)	935
AccII	CGCG	1 cut(s)	178
AciI	CCGC	6 cut(s)	206, 527, 799, 935, 1354, 2397
AclWI	GGATC	3 cut(s)	1213, 1569, 1683
AcoI	YGGCCR	2 cut(s)	408, 2041
AcsI	RAATTY	3 cut(s)	574, 1423, 2155
AcuI	CTGAAG	2 cut(s)	152, 1335
AcyI	GRCGYC	1 cut(s)	1293
AfaI	GTAC	2 cut(s)	1239, 1718
AfeI	AGCGCT	1 cut(s)	760
AfiI	CCNNNNNNNGG	5 cut(s)	130, 863, 977, 999, 1558
AflIII	ACRYGT	2 cut(s)	1482, 1804
AgsI	TTSAA	8 cut(s)	100, 658, 1077, 1196, 1285, 1446, 1830, 2335
AhlI	ACTAGT	2 cut(s)	50, 1189
AjnI	CCWGG	4 cut(s)	317, 709, 992, 1862
Alw21I	GWGCWC	4 cut(s)	631, 1525, 1543, 1798
Alw26I	GTCTC	1 cut(s)	840
AlwI	GGATC	3 cut(s)	1213, 1569, 1683
AlwNI	CAGNNNCTG	1 cut(s)	2074
Ama87I	CYCGRG	2 cut(s)	762, 1147
Aor51HI	AGCGCT	1 cut(s)	760
AoxI	GGCC	4 cut(s)	408, 1640, 2041, 2349
ApeKI	GCWGC	5 cut(s)	1100, 1764, 1931, 2241, 2399
ApoI	RAATTY	3 cut(s)	574, 1423, 2155
AspLEI	GCGC	2 cut(s)	66, 761
AspS9I	GGNCC	6 cut(s)	154, 190, 720, 854, 1493, 1640
AsuC2I	CCSGG	1 cut(s)	724
AsuHPI	GGTGA	7 cut(s)	56, 266, 899, 959, 1265, 1340, 2230
AvaI	CYCGRG	2 cut(s)	762, 1147
AvaII	GGWCC	5 cut(s)	154, 190, 720, 854, 1493
BalI	TGGCCA	1 cut(s)	2043
BanI	GGYRCC	1 cut(s)	1365
BanII	GRGCYC	2 cut(s)	970, 1543
BbsI	GAAGAC	3 cut(s)	644, 721, 2313
Bbv12I	GWGCWC	4 cut(s)	631, 1525, 1543, 1798
BbvCI	CCTCAGC	1 cut(s)	858
BbvI	GCAGC	5 cut(s)	1087, 1751, 1943, 2253, 2386
BccI	CCATC	7 cut(s)	395, 443, 656, 664, 1020, 1717, 1985
BceAI	ACGGC	2 cut(s)	810, 1341
BciT130I	CCWGG	4 cut(s)	319, 711, 994, 1864
BciVI	GTATCC	2 cut(s)	18, 667
BclI	TGATCA	2 cut(s)	55, 1330
BcnI	CCSGG	1 cut(s)	724
BcoDI	GTCTC	1 cut(s)	840
BcuI	ACTAGT	2 cut(s)	50, 1189
BfmI	CTRYAG	5 cut(s)	834, 873, 888, 1765, 2130
BfoI	RGCGCY	1 cut(s)	762
BfuAI	ACCTGC	1 cut(s)	714
BfuI	GTATCC	2 cut(s)	18, 667
BglI	GCCNNNNNGGC	1 cut(s)	214
BglII	AGATCT	4 cut(s)	1322, 1408, 1942, 2107
BisI	GCNGC	5 cut(s)	1101, 1765, 1932, 2242, 2400
BlsI	GCNGC	5 cut(s)	1102, 1766, 1933, 2243, 2401
Bme1390I	CCNGG	5 cut(s)	319, 711, 724, 994, 1864
Bme18I	GGWCC	5 cut(s)	154, 190, 720, 854, 1493
BmeT110I	CYCGRG	2 cut(s)	762, 1147
BmgT120I	GGNCC	6 cut(s)	154, 190, 720, 854, 1493, 1640
BmrFI	CCNGG	5 cut(s)	319, 711, 724, 994, 1864
BmsI	GCATC	9 cut(s)	25, 253, 304, 550, 1208, 1605, 1888, 1951, 1996
BpiI	GAAGAC	3 cut(s)	644, 721, 2313
Bpu10I	CCTNAGC	3 cut(s)	858, 1887, 1892
BpuEI	CTTGAG	2 cut(s)	14, 879
BpuMI	CCSGG	1 cut(s)	724
BsaAI	YACGTR	1 cut(s)	1483
BsaHI	GRCGYC	1 cut(s)	1293
BsaJI	CCNNGG	5 cut(s)	267, 622, 992, 1105, 1131
BsaWI	WCCGGW	1 cut(s)	748
BsaXI	ACNNNNNCTCC	6 cut(s)	322, 352, 487, 517, 952, 982
Bsc4I	CCNNNNNNNGG	5 cut(s)	130, 863, 977, 999, 1558
Bse1I	ACTGG	4 cut(s)	201, 417, 1552, 2079
Bse3DI	GCAATG	3 cut(s)	520, 1038, 1928
BseBI	CCWGG	4 cut(s)	319, 711, 994, 1864
BseDI	CCNNGG	5 cut(s)	267, 622, 992, 1105, 1131
BseLI	CCNNNNNNNGG	5 cut(s)	130, 863, 977, 999, 1558
BseMI	GCAATG	3 cut(s)	520, 1038, 1928
BseNI	ACTGG	4 cut(s)	201, 417, 1552, 2079
BseRI	GAGGAG	1 cut(s)	533
BseXI	GCAGC	5 cut(s)	1087, 1751, 1943, 2253, 2386
BsgI	GTGCAG	1 cut(s)	2385
Bsh1236I	CGCG	1 cut(s)	178
BshFI	GGCC	4 cut(s)	410, 1642, 2043, 2351
BshNI	GGYRCC	1 cut(s)	1365
BsiHKAI	GWGCWC	4 cut(s)	631, 1525, 1543, 1798
BsiHKCI	CYCGRG	2 cut(s)	762, 1147
BsiSI	CCGG	3 cut(s)	411, 724, 749
BslFI	GGGAC	5 cut(s)	167, 203, 706, 1362, 1738
BslI	CCNNNNNNNGG	5 cut(s)	130, 863, 977, 999, 1558
BsmAI	GTCTC	1 cut(s)	840
BsmFI	GGGAC	5 cut(s)	167, 203, 706, 1362, 1738
BsmI	GAATGC	2 cut(s)	90, 217
BsnI	GGCC	4 cut(s)	410, 1642, 2043, 2351
BsoBI	CYCGRG	2 cut(s)	762, 1147
Bsp1286I	GDGCHC	5 cut(s)	631, 970, 1525, 1543, 1798
Bsp19I	CCATGG	2 cut(s)	1105, 1131
Bsp68I	TCGCGA	1 cut(s)	178
BspACI	CCGC	6 cut(s)	206, 527, 799, 935, 1354, 2397
BspANI	GGCC	4 cut(s)	410, 1642, 2043, 2351
BspFNI	CGCG	1 cut(s)	178
BspHI	TCATGA	2 cut(s)	556, 1455
BspMAI	CTGCAG	2 cut(s)	1769, 2134
BspMI	ACCTGC	1 cut(s)	714
BspPI	GGATC	3 cut(s)	1213, 1569, 1683
BspT107I	GGYRCC	1 cut(s)	1365
BsrBI	CCGCTC	1 cut(s)	935
BsrDI	GCAATG	3 cut(s)	520, 1038, 1928
BsrI	ACTGG	4 cut(s)	201, 417, 1552, 2079
BssECI	CCNNGG	5 cut(s)	267, 622, 992, 1105, 1131
BssNI	GRCGYC	1 cut(s)	1293
BssT1I	CCWWGG	4 cut(s)	267, 622, 1105, 1131
Bst2UI	CCWGG	4 cut(s)	319, 711, 994, 1864
Bst4CI	ACNGT	7 cut(s)	720, 1716, 1916, 2140, 2149, 2218, 2428
Bst6I	CTCTTC	2 cut(s)	244, 479
BstACI	GRCGYC	1 cut(s)	1293
BstAPI	GCANNNNNTGC	1 cut(s)	1593
BstBAI	YACGTR	1 cut(s)	1483
BstC8I	GCNNGC	2 cut(s)	1525, 2239
BstDSI	CCRYGG	2 cut(s)	1105, 1131
BstFNI	CGCG	1 cut(s)	178
BstH2I	RGCGCY	1 cut(s)	762
BstHHI	GCGC	2 cut(s)	66, 761
BstMAI	GTCTC	1 cut(s)	840
BstMWI	GCNNNNNNNGC	6 cut(s)	214, 356, 765, 836, 1316, 1593
BstNI	CCWGG	4 cut(s)	319, 711, 994, 1864
BstNSI	RCATGY	3 cut(s)	1129, 1393, 1808
BstSCI	CCNGG	5 cut(s)	317, 709, 722, 992, 1862
BstSFI	CTRYAG	5 cut(s)	834, 873, 888, 1765, 2130
BstUI	CGCG	1 cut(s)	178
BstV1I	GCAGC	5 cut(s)	1087, 1751, 1943, 2253, 2386
BstV2I	GAAGAC	3 cut(s)	644, 721, 2313
BstX2I	RGATCY	5 cut(s)	1322, 1408, 1675, 1942, 2107
BstXI	CCANNNNNNTGG	2 cut(s)	710, 1807
BstYI	RGATCY	5 cut(s)	1322, 1408, 1675, 1942, 2107
BsuI	GTATCC	2 cut(s)	18, 667
BsuRI	GGCC	4 cut(s)	410, 1642, 2043, 2351
BtgI	CCRYGG	2 cut(s)	1105, 1131
BtgZI	GCGATG	1 cut(s)	1582
BtsI	GCAGTG	2 cut(s)	781, 1774
BtsIMutI	CAGTG	4 cut(s)	424, 781, 1774, 1964
BtuMI	TCGCGA	1 cut(s)	178
BveI	ACCTGC	1 cut(s)	714
Cac8I	GCNNGC	2 cut(s)	1525, 2239
CaiI	CAGNNNCTG	1 cut(s)	2074
CciI	TCATGA	2 cut(s)	556, 1455
CfoI	GCGC	2 cut(s)	66, 761
Cfr13I	GGNCC	6 cut(s)	154, 190, 720, 854, 1493, 1640
CseI	GACGC	4 cut(s)	678, 828, 1387, 2312
Csp6I	GTAC	2 cut(s)	1238, 1717
CspCI	CAANNNNNGTGG	2 cut(s)	1558, 1593
CviQI	GTAC	2 cut(s)	1238, 1717
DrdI	GACNNNNNNGTC	1 cut(s)	161
DseDI	GACNNNNNNGTC	1 cut(s)	161
EaeI	YGGCCR	2 cut(s)	408, 2041
Eam1104I	CTCTTC	2 cut(s)	244, 479
EarI	CTCTTC	2 cut(s)	244, 479
EciI	GGCGGA	3 cut(s)	195, 516, 814
Ecl136II	GAGCTC	1 cut(s)	1541
Eco130I	CCWWGG	4 cut(s)	267, 622, 1105, 1131
Eco24I	GRGCYC	2 cut(s)	970, 1543
Eco47I	GGWCC	5 cut(s)	154, 190, 720, 854, 1493
Eco47III	AGCGCT	1 cut(s)	760
Eco53kI	GAGCTC	1 cut(s)	1541
Eco57I	CTGAAG	2 cut(s)	152, 1335
Eco88I	CYCGRG	2 cut(s)	762, 1147
EcoICRI	GAGCTC	1 cut(s)	1541
EcoO109I	RGGNCCY	2 cut(s)	154, 190
EcoRI	GAATTC	1 cut(s)	574
EcoRII	CCWGG	4 cut(s)	317, 709, 992, 1862
EcoT14I	CCWWGG	4 cut(s)	267, 622, 1105, 1131
EcoT38I	GRGCYC	2 cut(s)	970, 1543
ErhI	CCWWGG	4 cut(s)	267, 622, 1105, 1131
FalI	AAGNNNNNCTT	2 cut(s)	814, 846
FaqI	GGGAC	5 cut(s)	167, 203, 706, 1362, 1738
FauNDI	CATATG	1 cut(s)	108
FbaI	TGATCA	2 cut(s)	55, 1330
Fnu4HI	GCNGC	5 cut(s)	1101, 1765, 1932, 2242, 2400
FriOI	GRGCYC	2 cut(s)	970, 1543
Fsp4HI	GCNGC	5 cut(s)	1101, 1765, 1932, 2242, 2400
FspI	TGCGCA	1 cut(s)	65
GlaI	GCGC	2 cut(s)	65, 760
GluI	GCNGC	5 cut(s)	1101, 1765, 1932, 2242, 2400
HaeII	RGCGCY	1 cut(s)	762
HaeIII	GGCC	4 cut(s)	410, 1642, 2043, 2351
HapII	CCGG	3 cut(s)	411, 724, 749
HgaI	GACGC	4 cut(s)	678, 828, 1387, 2312
HhaI	GCGC	2 cut(s)	66, 761
Hin1I	GRCGYC	1 cut(s)	1293
Hin6I	GCGC	2 cut(s)	64, 759
HinP1I	GCGC	2 cut(s)	64, 759
HincII	GTYRAC	2 cut(s)	1983, 2385
HindII	GTYRAC	2 cut(s)	1983, 2385
HindIII	AAGCTT	1 cut(s)	2328
HpaI	GTTAAC	1 cut(s)	2385
HpaII	CCGG	3 cut(s)	411, 724, 749
HphI	GGTGA	7 cut(s)	56, 266, 899, 959, 1265, 1340, 2230
Hpy166II	GTNNAC	7 cut(s)	422, 602, 779, 1256, 1983, 2036, 2385
Hpy8I	GTNNAC	7 cut(s)	422, 602, 779, 1256, 1983, 2036, 2385
Hpy99I	CGWCG	1 cut(s)	1298
HpyAV	CCTTC	9 cut(s)	176, 204, 234, 279, 303, 1041, 1081, 1774, 2265
HpyCH4III	ACNGT	7 cut(s)	720, 1716, 1916, 2140, 2149, 2218, 2428
HpyCH4IV	ACGT	4 cut(s)	379, 1293, 1482, 1985
HpyF10VI	GCNNNNNNNGC	6 cut(s)	214, 356, 765, 836, 1316, 1593
HpySE526I	ACGT	4 cut(s)	379, 1293, 1482, 1985
Hsp92I	GRCGYC	1 cut(s)	1293
HspAI	GCGC	2 cut(s)	64, 759
KflI	GGGWCCC	1 cut(s)	190
Ksp22I	TGATCA	2 cut(s)	55, 1330
KspAI	GTTAAC	1 cut(s)	2385
LmnI	GCTCC	4 cut(s)	520, 932, 973, 1050
Lsp1109I	GCAGC	5 cut(s)	1087, 1751, 1943, 2253, 2386
LweI	GCATC	9 cut(s)	25, 253, 304, 550, 1208, 1605, 1888, 1951, 1996
MaeII	ACGT	4 cut(s)	379, 1293, 1482, 1985
MaeIII	GTNAC	5 cut(s)	141, 542, 958, 1649, 2202
MbiI	CCGCTC	1 cut(s)	935
MfeI	CAATTG	2 cut(s)	653, 2360
MflI	RGATCY	5 cut(s)	1322, 1408, 1675, 1942, 2107
MhlI	GDGCHC	5 cut(s)	631, 970, 1525, 1543, 1798
MlsI	TGGCCA	1 cut(s)	2043
MluNI	TGGCCA	1 cut(s)	2043
MlyI	GAGTC	3 cut(s)	547, 634, 2011
MmeI	TCCRAC	1 cut(s)	1326
Mox20I	TGGCCA	1 cut(s)	2043
MscI	TGGCCA	1 cut(s)	2043
MseI	TTAA	3 cut(s)	1083, 2142, 2384
MslI	CAYNNNNRTG	1 cut(s)	1130
Msp20I	TGGCCA	1 cut(s)	2043
MspA1I	CMGCKG	1 cut(s)	2399
MspI	CCGG	3 cut(s)	411, 724, 749
MspR9I	CCNGG	5 cut(s)	319, 711, 724, 994, 1864
MunI	CAATTG	2 cut(s)	653, 2360
Mva1269I	GAATGC	2 cut(s)	90, 217
MvaI	CCWGG	4 cut(s)	319, 711, 994, 1864
MvnI	CGCG	1 cut(s)	178
MwoI	GCNNNNNNNGC	6 cut(s)	214, 356, 765, 836, 1316, 1593
NciI	CCSGG	1 cut(s)	724
NcoI	CCATGG	2 cut(s)	1105, 1131
NdeI	CATATG	1 cut(s)	108
NmeAIII	GCCGAG	2 cut(s)	1419, 2377
NmuCI	GTSAC	3 cut(s)	141, 958, 2202
NruI	TCGCGA	1 cut(s)	178
NsbI	TGCGCA	1 cut(s)	65
NspI	RCATGY	3 cut(s)	1129, 1393, 1808
PaeR7I	CTCGAG	1 cut(s)	1147
PagI	TCATGA	2 cut(s)	556, 1455
PaqCI	CACCTGC	1 cut(s)	714
PciI	ACATGT	1 cut(s)	1804
PcsI	WCGNNNNNNNCGW	1 cut(s)	1299
PctI	GAATGC	2 cut(s)	90, 217
PfeI	GAWTC	8 cut(s)	473, 581, 735, 988, 1008, 1073, 1169, 2049
PflMI	CCANNNNNTGG	1 cut(s)	1558
PkrI	GCNGC	5 cut(s)	1102, 1766, 1933, 2243, 2401
PleI	GAGTC	3 cut(s)	547, 634, 2011
PpsI	GAGTC	3 cut(s)	547, 634, 2011
Ppu21I	YACGTR	1 cut(s)	1483
PpuMI	RGGWCCY	2 cut(s)	154, 190
PscI	ACATGT	1 cut(s)	1804
Psp124BI	GAGCTC	1 cut(s)	1543
Psp5II	RGGWCCY	2 cut(s)	154, 190
Psp6I	CCWGG	4 cut(s)	317, 709, 992, 1862
PspGI	CCWGG	4 cut(s)	317, 709, 992, 1862
PspPI	GGNCC	6 cut(s)	154, 190, 720, 854, 1493, 1640
PspPPI	RGGWCCY	2 cut(s)	154, 190
PspXI	VCTCGAGB	1 cut(s)	1147
PstI	CTGCAG	2 cut(s)	1769, 2134
PstNI	CAGNNNCTG	1 cut(s)	2074
PsuI	RGATCY	5 cut(s)	1322, 1408, 1675, 1942, 2107
RruI	TCGCGA	1 cut(s)	178
RsaI	GTAC	2 cut(s)	1239, 1718
RsaNI	GTAC	2 cut(s)	1238, 1717
RseI	CAYNNNNRTG	1 cut(s)	1130
SacI	GAGCTC	1 cut(s)	1543
SaqAI	TTAA	3 cut(s)	1083, 2142, 2384
SatI	GCNGC	5 cut(s)	1101, 1765, 1932, 2242, 2400
Sau96I	GGNCC	6 cut(s)	154, 190, 720, 854, 1493, 1640
SchI	GAGTC	3 cut(s)	547, 634, 2011
ScrFI	CCNGG	5 cut(s)	319, 711, 724, 994, 1864
SduI	GDGCHC	5 cut(s)	631, 970, 1525, 1543, 1798
SfaNI	GCATC	9 cut(s)	25, 253, 304, 550, 1208, 1605, 1888, 1951, 1996
SfcI	CTRYAG	5 cut(s)	834, 873, 888, 1765, 2130
Sfr274I	CTCGAG	1 cut(s)	1147
SinI	GGWCC	5 cut(s)	154, 190, 720, 854, 1493
SlaI	CTCGAG	1 cut(s)	1147
SmiMI	CAYNNNNRTG	1 cut(s)	1130
SmlI	CTYRAG	3 cut(s)	29, 894, 1147
SmoI	CTYRAG	3 cut(s)	29, 894, 1147
SpeI	ACTAGT	2 cut(s)	50, 1189
SsiI	CCGC	6 cut(s)	206, 527, 799, 935, 1354, 2397
SstI	GAGCTC	1 cut(s)	1543
StyD4I	CCNGG	5 cut(s)	317, 709, 722, 992, 1862
StyI	CCWWGG	4 cut(s)	267, 622, 1105, 1131
TaaI	ACNGT	7 cut(s)	720, 1716, 1916, 2140, 2149, 2218, 2428
TaiI	ACGT	4 cut(s)	382, 1296, 1485, 1988
TaqI	TCGA	9 cut(s)	307, 631, 1004, 1148, 1656, 1662, 1778, 1792, 2419
TatI	WGTACW	1 cut(s)	1716
TfiI	GAWTC	8 cut(s)	473, 581, 735, 988, 1008, 1073, 1169, 2049
Tru1I	TTAA	3 cut(s)	1083, 2142, 2384
Tru9I	TTAA	3 cut(s)	1083, 2142, 2384
TscAI	CASTG	4 cut(s)	424, 781, 1774, 1971
TseFI	GTSAC	3 cut(s)	141, 958, 2202
TseI	GCWGC	5 cut(s)	1100, 1764, 1931, 2241, 2399
Tsp45I	GTSAC	3 cut(s)	141, 958, 2202
TspDTI	ATGAA	3 cut(s)	650, 1472, 1986
TspRI	CASTG	4 cut(s)	424, 781, 1774, 1971
Van91I	CCANNNNNTGG	1 cut(s)	1558
VpaK11BI	GGWCC	5 cut(s)	154, 190, 720, 854, 1493
XapI	RAATTY	3 cut(s)	574, 1423, 2155
XbaI	TCTAGA	3 cut(s)	1535, 1945, 2020
XceI	RCATGY	3 cut(s)	1129, 1393, 1808
XhoI	CTCGAG	1 cut(s)	1147
ZraI	GACGTC	1 cut(s)	1294

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.