AT4G20940

LRR receptor-like serine threonine-protein kinase At4g20940

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
OG0007159
Physical Location & Seq
Forward (+)
11202728 .. 11206280
3553 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G20940.1

Sequence Viewer

Length: 3114 bp
ATGGGGCAACTTCCATCACAGGACATCATGGCATTGCTTGAATTCAAGAAAGGCATCAAACATGACCCTACAGGGTTTGTCCTTAATTCATGGAACGATGAGTCTATTGACTTCAATGGTTGTCCTTCTTCATGGAATGGTATTGTCTGCAATGGCGGTAATGTGGCTGGTGTTGTTTTGGATAATTTGGGTTTGACTGCTGATGCTGATTTCAGTCTGTTCTCCAACTTGACAAAGCTTGTCAAGCTATCTATGTCAAACAATTCCCTTTCTGGTGTGTTGCCAAATGATTTAGGCAGTTTCAAAAGCCTCCAGTTCCTGGATTTATCAGATAATCTGTTCTCTTCTTCATTGCCTAAAGAGATTGGTAGATCAGTAAGCTTGAGGAATCTTTCTTTATCTGGTAACAACTTTTCTGGTGAGATTCCAGAGTCTATGGGTGGTTTGATTTCACTTCAGTCGTTGGATATGAGTAGCAACTCCTTATCTGGACCTTTGCCAAAGTCCTTGACAAGGCTGAACGATCTGCTGTACTTGAATCTGTCTTCTAATGGATTCACGGGGAAAATGCCAAGGGGCTTTGAGTTGATTTCAAGTCTTGAAGTGCTTGATTTGCATGGTAATTCAATTGATGGTAATCTTGATGGGGAGTTTTTCCTTTTAACGAATGCGAGCTATGTCGATATCAGTGGAAACAGATTGGTGACGACGTCTGGGAAACTGTTACCTGGTGTTTCTGAGAGTATCAAGCACTTGAATCTCAGCCATAATCAGCTTGAAGGTTCATTGACTAGTGGGTTTCAGTTGTTTCAGAACTTAAAAGTCTTGGATCTTAGCTACAACATGTTATCTGGAGAATTACCAGGTTTCAATTATGTCTATGATCTTGAAGTTCTCAAGCTTAGCAACAACAGATTCTCAGGTTCCCTTCCCAATAATTTGTTAAAAGGTGACTCTTTGCTTTTAACAACGCTGGATTTAAGTGGCAACAATCTCTCAGGGCCAGTAAGTTCTATCATGTCAACTACTCTTCACACCCTTGATCTTTCTTCAAATTCACTGACCGGGGAGCTTCCTCTCTTGACTGGGGGATGTGTTTTACTCGATCTCTCAAACAACCAGTTTGAAGGAAATCTGACAAGATGGTCAAAATGGGAGAATATAGAGTACCTTGATCTAAGCCAGAACCATTTCACTGGGTCGTTCCCAGACGCAACTCCCCAGCTTCTGCGAGCAAATCATCTTAATCTTTCCTACAATAAGCTCACAGGCTCACTTCCAGAACGGATTCCAACTCACTATCCGAAGCTTCGGGTACTTGATATAAGTTCTAACAGCTTAGAAGGGCCAATTCCAGGTGCGTTACTATCCATGCCCACTTTGGAGGAAATCCACCTTCAAAACAATGGCATGACAGGTAACATCGGACCCCTGCCTTCTTCTGGTTCCAGAATCCGTCTTCTTGATCTTTCTCACAACCGGTTTGACGGGGATCTTCCTGGTGTATTCGGGTCTTTAACCAATCTTCAAGTGCTGAATCTCGCAGCAAATAATTTGTCTGGCTCTTTGCCTAGCTCCATGAATGACATTGTCTCTCTAAGCTCATTAGACGTATCCCAGAATCATTTCACTGGACCACTCCCAAGCAACTTATCTAGCAACATTATGGCCTTCAACGTGTCATATAATGATCTATCAGGGACTGTGCCAGAGAATCTGAAGAACTTCCCTCCGCCTTCCTTTTATCCTGGAAACAGCAAGCTCGTCTTGCCTGCTGGGTCCCCTGGATCAAGTGCATCAGAAGCTTCCAAGAATAAATCCACGAACAAACTTGTTAAGGTTGTCATAATAGTTTCTTGCGCTGTTGCTCTAATTATTCTCATCCTTGTGGCTATCCTCCTTTTCTGCATCTGCAAATCAAGAAGGCGCGAAGAACGTAGTATTACTGGTAAAGAAACTAATAGGCGGGCTCAAACTATCCCCTCAGGCAGCGGAGGTGGTATGGTTGTCTCTGCTGAGGATCTGGTTGCTTCAAGAAAAGGCTCATCATCCGAAATCCTCAGTCCAGATGAAAAACTAGCTGTTGCAACCGGCTTCTCTCCTTCTAAGACCAGCAATTTGTCTTGGTCACCTGGCTCAGGAGATTCATTCCCAGCTGATCAGCAACTAGCACGGCTTGATGTGAGGTCACCAGATAGACTTGTGGGAGAGCTGCATTTTCTGGATGATTCAATTAAGTTGACTCCAGAGGAATTATCAAGGGCACCAGCTGAAGTTCTGGGAAGAAGTAGCCACGGCACTTCTTACAGGGCAACGCTGGATAATGGAGTGTTTCTAACAGTGAAATGGCTAAGAGAAGGAGTGGCAAAGCAGAGAAAGGAGTTTGCTAAAGAGGTGAAGAAATTTTCTAACATTAGACATCCTAATGTTGTGACTCTCCGAGGGTACTATTGGGGTCCAACGCAACACGAGAAGCTTATTCTTTCAGATTATATATCGCCTGGAAGCCTTGCCAGCTTCCTTTACGATCGACCGGGCAGGAAAGGCCCTCCCTTAGCCTGGACCCAACGGTTGAAAATCGCAGTTGATGTGGCACGTGGTCTAAACTACCTCCATTTCGACAGAGCTGTTCCACACGGTAACCTCAAGGCAACAAACATTCTCTTAGATGGAGCAGAGCTAAACGCGCGTGTGGCAGATTACTGCCTCCACCGTCTCATGACACAAGCAGGCACAGTCGAACAGATTCTAGACGCAGGAATCCTCGGTTACCGAGCTCCCGAGCTAGCAGCTTCAAGAAAACCATTACCTTCTTTCAAATCAGATGTATATGCGTTTGGTGTGATACTTCTTGAGATCCTAACCGGAAGATGTGCAGGAGATGTAATCACAGGTGAGCAAGAAGGTGTTGATCTAACCGATTGGGTTAGGTTACGTGTTGCAGAAGGGCGTGGTGCAGAATGCTTTGATTCGGTATTGACTCAGGAGATGGGAAGTGATCCGGTAACAGAAAAAGGCATGAAAGAAGTTCTTGGGATTGCTTTGAGGTGTATAAGATCAGTTTCTGAGAGACCTGGTATTAAGACCATTTACGAAGATCTTTCTTCTATTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8 Pkinase_Tyr

Protein Analysis

1037

Amino Acids

112.04

Weight (kDa)

5.85

Isoelectric Point (pI)

38.55

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 6 - 51 3.2e-08 Leucine rich repeat N-terminal domain
LRR_14 PF23598 96 - 206 1.4e-12 Leucine-rich repeat region
LRR_8 PF13855 127 - 185 1.4e-06 Leucine rich repeat
LRR_8 PF13855 414 - 470 9.6e-07 Leucine rich repeat
LRR_8 PF13855 484 - 543 5.6e-09 Leucine rich repeat
PK_Tyr_Ser-Thr PF07714 758 - 957 1.3e-28 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 758 - 958 1e-23 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1144
AatII GACGTC 1 cut(s) 713
AccB1I GGYRCC 1 cut(s) 2263
AccB7I CCANNNNNTGG 1 cut(s) 319
AccII CGCG 3 cut(s) 1929, 2687, 2689
AciI CCGC 4 cut(s) 156, 1733, 1966, 1992
AclWI GGATC 6 cut(s) 837, 1500, 1795, 2028, 2851, 2993
AcsI RAATTY 3 cut(s) 41, 1054, 2402
AcuI CTGAAG 3 cut(s) 440, 1739, 2292
AcvI CACGTG 1 cut(s) 2597
AcyI GRCGYC 1 cut(s) 710
AfaI GTAC 4 cut(s) 533, 1169, 1317, 2447
AfiI CCNNNNNNNGG 6 cut(s) 319, 513, 1355, 1442, 2138, 2559
AflIII ACRYGT 3 cut(s) 843, 1677, 2935
AgeI ACCGGT 1 cut(s) 1479
AhlI ACTAGT 1 cut(s) 791
Alw21I GWGCWC 1 cut(s) 2779
Alw26I GTCTC 4 cut(s) 1597, 2014, 2720, 3064
AlwI GGATC 6 cut(s) 837, 1500, 1795, 2028, 2851, 2993
AlwNI CAGNNNCTG 4 cut(s) 319, 1228, 1703, 3065
Ama87I CYCGRG 1 cut(s) 2780
AoxI GGCC 4 cut(s) 1001, 1346, 1668, 2545
ApeKI GCWGC 4 cut(s) 1544, 1989, 2212, 2789
ApoI RAATTY 3 cut(s) 41, 1054, 2402
ArsI GACNNNNNNTTYG 4 cut(s) 1541, 1573, 2101, 2133
AsiGI ACCGGT 1 cut(s) 1479
Asp700I GAANNNNTTC 5 cut(s) 1190, 1287, 1625, 1724, 2745
AspLEI GCGC 3 cut(s) 1862, 1929, 2689
AspS9I GGNCC 9 cut(s) 491, 1001, 1346, 1427, 1634, 1779, 2456, 2546, 2562
AsuC2I CCSGG 2 cut(s) 1066, 2535
AsuHPI GGTGA 7 cut(s) 431, 715, 962, 2121, 2181, 2407, 2906
AsuNHI GCTAGC 1 cut(s) 2785
AvaI CYCGRG 1 cut(s) 2780
AvaII GGWCC 6 cut(s) 491, 1427, 1634, 1779, 2456, 2562
AxyI CCTNAGG 1 cut(s) 1984
BaeGI GKGCMC 1 cut(s) 2266
BanI GGYRCC 1 cut(s) 2263
BanII GRGCYC 2 cut(s) 1972, 2779
BauI CACGAG 1 cut(s) 2468
BbrPI CACGTG 1 cut(s) 2597
BbsI GAAGAC 2 cut(s) 537, 1451
Bbv12I GWGCWC 1 cut(s) 2779
BbvCI CCTCAGC 1 cut(s) 2016
BbvI GCAGC 4 cut(s) 1556, 2001, 2199, 2801
BccI CCATC 6 cut(s) 22, 626, 638, 1137, 2663, 2983
BceAI ACGGC 2 cut(s) 2189, 2311
BciVI GTATCC 1 cut(s) 1624
BclI TGATCA 1 cut(s) 2158
BcnI CCSGG 2 cut(s) 1066, 2535
BcoDI GTCTC 4 cut(s) 1597, 2014, 2720, 3064
BcuI ACTAGT 1 cut(s) 791
BfaI CTAG 7 cut(s) 792, 1572, 1656, 2078, 2168, 2750, 2786
BfmI CTRYAG 1 cut(s) 69
BfuI GTATCC 1 cut(s) 1624
BglII AGATCT 1 cut(s) 3097
BisI GCNGC 4 cut(s) 1545, 1990, 2213, 2790
BlpI GCTNAGC 1 cut(s) 902
BlsI GCNGC 4 cut(s) 1546, 1991, 2214, 2791
Bme18I GGWCC 6 cut(s) 491, 1427, 1634, 1779, 2456, 2562
BmeT110I CYCGRG 1 cut(s) 2780
BmgT120I GGNCC 9 cut(s) 491, 1001, 1346, 1427, 1634, 1779, 2456, 2546, 2562
BmiI GGNNCC 8 cut(s) 925, 1429, 1447, 1780, 1781, 2265, 2457, 2564
BmrI ACTGGG 2 cut(s) 1095, 1206
BmsI GCATC 4 cut(s) 63, 193, 1805, 1917
BmtI GCTAGC 1 cut(s) 2789
BmuI ACTGGG 2 cut(s) 1095, 1206
BpiI GAAGAC 2 cut(s) 537, 1451
BpmI CTGGAG 3 cut(s) 296, 873, 2229
Bpu10I CCTNAGC 3 cut(s) 2016, 2137, 2554
Bpu1102I GCTNAGC 1 cut(s) 902
BpuEI CTTGAG 4 cut(s) 403, 881, 2630, 2873
BpuMI CCSGG 2 cut(s) 1066, 2535
BsaAI YACGTR 2 cut(s) 2597, 2936
BsaBI GATNNNNATC 1 cut(s) 636
BsaHI GRCGYC 1 cut(s) 710
BsaI GGTCTC 1 cut(s) 3064
BsaJI CCNNGG 6 cut(s) 572, 1065, 1783, 2293, 2440, 2764
BsaWI WCCGGW 3 cut(s) 1479, 2864, 3001
Bsc4I CCNNNNNNNGG 6 cut(s) 319, 513, 1355, 1442, 2138, 2559
Bse118I RCCGGY 2 cut(s) 1479, 2090
Bse1I ACTGG 7 cut(s) 313, 1004, 1090, 1120, 1201, 1636, 1951
Bse21I CCTNAGG 1 cut(s) 1984
Bse3DI GCAATG 3 cut(s) 32, 157, 350
Bse8I GATNNNNATC 1 cut(s) 636
BseDI CCNNGG 6 cut(s) 572, 1065, 1783, 2293, 2440, 2764
BseGI GGATG 5 cut(s) 1097, 1881, 2048, 2230, 2419
BseJI GATNNNNATC 1 cut(s) 636
BseLI CCNNNNNNNGG 6 cut(s) 319, 513, 1355, 1442, 2138, 2559
BseMI GCAATG 3 cut(s) 32, 157, 350
BseNI ACTGG 7 cut(s) 313, 1004, 1090, 1120, 1201, 1636, 1951
BseSI GKGCMC 1 cut(s) 2266
BseXI GCAGC 4 cut(s) 1556, 2001, 2199, 2801
BseYI CCCAGC 3 cut(s) 1221, 1775, 2152
BsgI GTGCAG 2 cut(s) 2895, 2976
Bsh1236I CGCG 3 cut(s) 1929, 2687, 2689
Bsh1285I CGRYCG 2 cut(s) 2530, 2534
BshFI GGCC 4 cut(s) 1003, 1348, 1670, 2547
BshNI GGYRCC 1 cut(s) 2263
BshTI ACCGGT 1 cut(s) 1479
BsiEI CGRYCG 2 cut(s) 2530, 2534
BsiHKAI GWGCWC 1 cut(s) 2779
BsiHKCI CYCGRG 1 cut(s) 2780
BsiSI CCGG 6 cut(s) 1065, 1480, 2091, 2534, 2865, 3002
BslFI GGGAC 2 cut(s) 1714, 1765
BslI CCNNNNNNNGG 6 cut(s) 319, 513, 1355, 1442, 2138, 2559
BsmAI GTCTC 4 cut(s) 1597, 2014, 2720, 3064
BsmBI CGTCTC 1 cut(s) 2720
BsmFI GGGAC 2 cut(s) 1714, 1765
BsmI GAATGC 2 cut(s) 673, 2966
BsnI GGCC 4 cut(s) 1003, 1348, 1670, 2547
Bso31I GGTCTC 1 cut(s) 3064
BsoBI CYCGRG 1 cut(s) 2780
Bsp1286I GDGCHC 3 cut(s) 1972, 2266, 2779
Bsp1720I GCTNAGC 1 cut(s) 902
BspACI CCGC 4 cut(s) 156, 1733, 1966, 1992
BspANI GGCC 4 cut(s) 1003, 1348, 1670, 2547
BspFNI CGCG 3 cut(s) 1929, 2687, 2689
BspHI TCATGA 1 cut(s) 2718
BspLI GGNNCC 8 cut(s) 925, 1429, 1447, 1780, 1781, 2265, 2457, 2564
BspOI GCTAGC 1 cut(s) 2789
BspPI GGATC 6 cut(s) 837, 1500, 1795, 2028, 2851, 2993
BspT107I GGYRCC 1 cut(s) 2263
BspTNI GGTCTC 1 cut(s) 3064
BsrDI GCAATG 3 cut(s) 32, 157, 350
BsrFI RCCGGY 2 cut(s) 1479, 2090
BsrI ACTGG 7 cut(s) 313, 1004, 1090, 1120, 1201, 1636, 1951
BssAI RCCGGY 2 cut(s) 1479, 2090
BssECI CCNNGG 6 cut(s) 572, 1065, 1783, 2293, 2440, 2764
BssNI GRCGYC 1 cut(s) 710
BssSI CACGAG 1 cut(s) 2468
BssT1I CCWWGG 1 cut(s) 572
Bst2BI CACGAG 1 cut(s) 2468
Bst4CI ACNGT 7 cut(s) 723, 1705, 2341, 2571, 2639, 2714, 2737
Bst6I CTCTTC 2 cut(s) 349, 1035
BstACI GRCGYC 1 cut(s) 710
BstBAI YACGTR 2 cut(s) 2597, 2936
BstC8I GCNNGC 8 cut(s) 673, 1233, 1760, 1773, 1968, 2515, 2731, 2787
BstDSI CCRYGG 1 cut(s) 2293
BstEII GGTNACC 4 cut(s) 2127, 2187, 2639, 2768
BstENI CCTNNNNNAGG 2 cut(s) 511, 2136
BstF5I GGATG 5 cut(s) 1097, 1881, 2048, 2230, 2419
BstFNI CGCG 3 cut(s) 1929, 2687, 2689
BstHHI GCGC 3 cut(s) 1862, 1929, 2689
BstMAI GTCTC 4 cut(s) 1597, 2014, 2720, 3064
BstMCI CGRYCG 2 cut(s) 2530, 2534
BstMWI GCNNNNNNNGC 8 cut(s) 244, 613, 1768, 1802, 2514, 2544, 2686, 2693
BstNSI RCATGY 1 cut(s) 847
BstPI GGTNACC 4 cut(s) 2127, 2187, 2639, 2768
BstSFI CTRYAG 1 cut(s) 69
BstSLI GKGCMC 1 cut(s) 2266
BstUI CGCG 3 cut(s) 1929, 2687, 2689
BstV1I GCAGC 4 cut(s) 1556, 2001, 2199, 2801
BstV2I GAAGAC 2 cut(s) 537, 1451
BstX2I RGATCY 5 cut(s) 829, 1492, 2020, 2856, 3097
BstXI CCANNNNNNTGG 1 cut(s) 1196
BstYI RGATCY 5 cut(s) 829, 1492, 2020, 2856, 3097
Bsu36I CCTNAGG 1 cut(s) 1984
BsuI GTATCC 1 cut(s) 1624
BsuRI GGCC 4 cut(s) 1003, 1348, 1670, 2547
BtgI CCRYGG 1 cut(s) 2293
BtsCI GGATG 5 cut(s) 1097, 1881, 2048, 2230, 2419
BtsIMutI CAGTG 5 cut(s) 694, 1058, 1194, 1629, 2346
Cac8I GCNNGC 8 cut(s) 673, 1233, 1760, 1773, 1968, 2515, 2731, 2787
CaiI CAGNNNCTG 4 cut(s) 319, 1228, 1703, 3065
CciI TCATGA 1 cut(s) 2718
CfoI GCGC 3 cut(s) 1862, 1929, 2689
Cfr10I RCCGGY 2 cut(s) 1479, 2090
Cfr13I GGNCC 9 cut(s) 491, 1001, 1346, 1427, 1634, 1779, 2456, 2546, 2562
CseI GACGC 2 cut(s) 1220, 2762
CsiI ACCWGGT 3 cut(s) 727, 862, 3073
Csp6I GTAC 4 cut(s) 532, 1168, 1316, 2446
CspAI ACCGGT 1 cut(s) 1479
CviQI GTAC 4 cut(s) 532, 1168, 1316, 2446
DrdI GACNNNNNNGTC 1 cut(s) 1144
DseDI GACNNNNNNGTC 1 cut(s) 1144
Eam1104I CTCTTC 2 cut(s) 349, 1035
EarI CTCTTC 2 cut(s) 349, 1035
EciI GGCGGA 1 cut(s) 1722
Ecl136II GAGCTC 1 cut(s) 2777
Eco130I CCWWGG 1 cut(s) 572
Eco24I GRGCYC 2 cut(s) 1972, 2779
Eco31I GGTCTC 1 cut(s) 3064
Eco32I GATATC 1 cut(s) 685
Eco47I GGWCC 6 cut(s) 491, 1427, 1634, 1779, 2456, 2562
Eco53kI GAGCTC 1 cut(s) 2777
Eco57I CTGAAG 3 cut(s) 440, 1739, 2292
Eco72I CACGTG 1 cut(s) 2597
Eco81I CCTNAGG 1 cut(s) 1984
Eco88I CYCGRG 1 cut(s) 2780
Eco91I GGTNACC 4 cut(s) 2127, 2187, 2639, 2768
EcoICRI GAGCTC 1 cut(s) 2777
EcoNI CCTNNNNNAGG 2 cut(s) 511, 2136
EcoO109I RGGNCCY 2 cut(s) 1779, 2546
EcoO65I GGTNACC 4 cut(s) 2127, 2187, 2639, 2768
EcoRI GAATTC 1 cut(s) 41
EcoRV GATATC 1 cut(s) 685
EcoT14I CCWWGG 1 cut(s) 572
EcoT38I GRGCYC 2 cut(s) 1972, 2779
ErhI CCWWGG 1 cut(s) 572
Esp3I CGTCTC 1 cut(s) 2720
FalI AAGNNNNNCTT 4 cut(s) 1751, 1783, 3015, 3047
FaqI GGGAC 2 cut(s) 1714, 1765
FauI CCCGC 1 cut(s) 1959
FbaI TGATCA 1 cut(s) 2158
Fnu4HI GCNGC 4 cut(s) 1545, 1990, 2213, 2790
FokI GGATG 5 cut(s) 1104, 1868, 2035, 2237, 2406
FriOI GRGCYC 2 cut(s) 1972, 2779
Fsp4HI GCNGC 4 cut(s) 1545, 1990, 2213, 2790
FspBI CTAG 7 cut(s) 792, 1572, 1656, 2078, 2168, 2750, 2786
GlaI GCGC 3 cut(s) 1861, 1928, 2688
GluI GCNGC 4 cut(s) 1545, 1990, 2213, 2790
GsaI CCCAGC 3 cut(s) 1225, 1779, 2156
GsuI CTGGAG 3 cut(s) 296, 873, 2229
HaeIII GGCC 4 cut(s) 1003, 1348, 1670, 2547
HapII CCGG 6 cut(s) 1065, 1480, 2091, 2534, 2865, 3002
HgaI GACGC 2 cut(s) 1220, 2762
HhaI GCGC 3 cut(s) 1862, 1929, 2689
Hin1I GRCGYC 1 cut(s) 710
Hin6I GCGC 3 cut(s) 1860, 1927, 2687
HinP1I GCGC 3 cut(s) 1860, 1927, 2687
HincII GTYRAC 2 cut(s) 1023, 2241
HindII GTYRAC 2 cut(s) 1023, 2241
HindIII AAGCTT 6 cut(s) 236, 379, 899, 1307, 1803, 2474
HpaII CCGG 6 cut(s) 1065, 1480, 2091, 2534, 2865, 3002
HphI GGTGA 7 cut(s) 431, 715, 962, 2121, 2181, 2407, 2906
Hpy166II GTNNAC 2 cut(s) 1023, 2241
Hpy8I GTNNAC 2 cut(s) 1023, 2241
Hpy99I CGWCG 1 cut(s) 712
HpyCH4III ACNGT 7 cut(s) 723, 1705, 2341, 2571, 2639, 2714, 2737
HpyCH4IV ACGT 6 cut(s) 710, 1611, 1677, 1936, 2596, 2935
HpyF10VI GCNNNNNNNGC 8 cut(s) 244, 613, 1768, 1802, 2514, 2544, 2686, 2693
HpySE526I ACGT 6 cut(s) 710, 1611, 1677, 1936, 2596, 2935
Hsp92I GRCGYC 1 cut(s) 710
HspAI GCGC 3 cut(s) 1860, 1927, 2687
KflI GGGWCCC 1 cut(s) 1779
Ksp22I TGATCA 1 cut(s) 2158
LmnI GCTCC 4 cut(s) 1069, 1580, 2672, 2782
Lsp1109I GCAGC 4 cut(s) 1556, 2001, 2199, 2801
LweI GCATC 4 cut(s) 63, 193, 1805, 1917
MabI ACCWGGT 3 cut(s) 727, 862, 3073
MaeI CTAG 7 cut(s) 792, 1572, 1656, 2078, 2168, 2750, 2786
MaeII ACGT 6 cut(s) 710, 1611, 1677, 1936, 2596, 2935
MfeI CAATTG 1 cut(s) 627
MflI RGATCY 5 cut(s) 829, 1492, 2020, 2856, 3097
MhlI GDGCHC 3 cut(s) 1972, 2266, 2779
MlyI GAGTC 6 cut(s) 110, 440, 947, 2236, 2428, 2974
MmeI TCCRAC 4 cut(s) 249, 444, 1316, 2483
MroXI GAANNNNTTC 5 cut(s) 1190, 1287, 1625, 1724, 2745
MslI CAYNNNNRTG 2 cut(s) 1886, 2424
MspA1I CMGCKG 3 cut(s) 1992, 2156, 2270
MspI CCGG 6 cut(s) 1065, 1480, 2091, 2534, 2865, 3002
MunI CAATTG 1 cut(s) 627
Mva1269I GAATGC 2 cut(s) 673, 2966
MvnI CGCG 3 cut(s) 1929, 2687, 2689
MwoI GCNNNNNNNGC 8 cut(s) 244, 613, 1768, 1802, 2514, 2544, 2686, 2693
NciI CCSGG 2 cut(s) 1066, 2535
NheI GCTAGC 1 cut(s) 2785
NlaIV GGNNCC 8 cut(s) 925, 1429, 1447, 1780, 1781, 2265, 2457, 2564
NmuCI GTSAC 5 cut(s) 703, 950, 2127, 2187, 2431
NspI RCATGY 1 cut(s) 847
PagI TCATGA 1 cut(s) 2718
PciI ACATGT 1 cut(s) 843
PctI GAATGC 2 cut(s) 673, 2966
PdmI GAANNNNTTC 5 cut(s) 1190, 1287, 1625, 1724, 2745
PflFI GACNNNGTC 2 cut(s) 709, 1589
PflMI CCANNNNNTGG 1 cut(s) 319
PfoI TCCNGGA 2 cut(s) 318, 1747
PinAI ACCGGT 1 cut(s) 1479
PkrI GCNGC 4 cut(s) 1546, 1991, 2214, 2791
Ple19I CGATCG 1 cut(s) 2530
PleI GAGTC 6 cut(s) 109, 439, 947, 2236, 2428, 2974
PmaCI CACGTG 1 cut(s) 2597
PmlI CACGTG 1 cut(s) 2597
PpsI GAGTC 6 cut(s) 109, 439, 947, 2236, 2428, 2974
Ppu21I YACGTR 2 cut(s) 2597, 2936
PpuMI RGGWCCY 1 cut(s) 1779
PscI ACATGT 1 cut(s) 843
Psp124BI GAGCTC 1 cut(s) 2779
Psp5II RGGWCCY 1 cut(s) 1779
PspCI CACGTG 1 cut(s) 2597
PspEI GGTNACC 4 cut(s) 2127, 2187, 2639, 2768
PspFI CCCAGC 3 cut(s) 1221, 1775, 2152
PspN4I GGNNCC 8 cut(s) 925, 1429, 1447, 1780, 1781, 2265, 2457, 2564
PspPI GGNCC 9 cut(s) 491, 1001, 1346, 1427, 1634, 1779, 2456, 2546, 2562
PspPPI RGGWCCY 1 cut(s) 1779
PstNI CAGNNNCTG 4 cut(s) 319, 1228, 1703, 3065
PsuI RGATCY 5 cut(s) 829, 1492, 2020, 2856, 3097
PsyI GACNNNGTC 2 cut(s) 709, 1589
PvuI CGATCG 1 cut(s) 2530
PvuII CAGCTG 2 cut(s) 2156, 2270
RsaI GTAC 4 cut(s) 533, 1169, 1317, 2447
RsaNI GTAC 4 cut(s) 532, 1168, 1316, 2446
RseI CAYNNNNRTG 2 cut(s) 1886, 2424
SacI GAGCTC 1 cut(s) 2779
SatI GCNGC 4 cut(s) 1545, 1990, 2213, 2790
Sau96I GGNCC 9 cut(s) 491, 1001, 1346, 1427, 1634, 1779, 2456, 2546, 2562
SchI GAGTC 6 cut(s) 110, 440, 947, 2236, 2428, 2974
SduI GDGCHC 3 cut(s) 1972, 2266, 2779
SexAI ACCWGGT 3 cut(s) 727, 862, 3073
SfaNI GCATC 4 cut(s) 63, 193, 1805, 1917
SfcI CTRYAG 1 cut(s) 69
SinI GGWCC 6 cut(s) 491, 1427, 1634, 1779, 2456, 2562
SmiMI CAYNNNNRTG 2 cut(s) 1886, 2424
SmlI CTYRAG 4 cut(s) 382, 896, 2645, 2852
SmoI CTYRAG 4 cut(s) 382, 896, 2645, 2852
SpeI ACTAGT 1 cut(s) 791
SsiI CCGC 4 cut(s) 156, 1733, 1966, 1992
SspMI CTAG 7 cut(s) 792, 1572, 1656, 2078, 2168, 2750, 2786
SstI GAGCTC 1 cut(s) 2779
StyI CCWWGG 1 cut(s) 572
TaaI ACNGT 7 cut(s) 723, 1705, 2341, 2571, 2639, 2714, 2737
TaiI ACGT 6 cut(s) 713, 1614, 1680, 1939, 2599, 2938
TaqI TCGA 5 cut(s) 681, 1104, 2530, 2619, 2739
TatI WGTACW 1 cut(s) 531
TscAI CASTG 5 cut(s) 694, 1065, 1201, 1636, 2346
TseFI GTSAC 5 cut(s) 703, 950, 2127, 2187, 2431
TseI GCWGC 4 cut(s) 1544, 1989, 2212, 2789
Tsp45I GTSAC 5 cut(s) 703, 950, 2127, 2187, 2431
TspDTI ATGAA 8 cut(s) 78, 120, 339, 774, 1595, 2085, 2136, 3035
TspGWI ACGGA 2 cut(s) 1300, 1445
TspRI CASTG 5 cut(s) 694, 1065, 1201, 1636, 2346
Tth111I GACNNNGTC 2 cut(s) 709, 1589
Van91I CCANNNNNTGG 1 cut(s) 319
VpaK11BI GGWCC 6 cut(s) 491, 1427, 1634, 1779, 2456, 2562
XagI CCTNNNNNAGG 2 cut(s) 511, 2136
XapI RAATTY 3 cut(s) 41, 1054, 2402
XbaI TCTAGA 1 cut(s) 2749
XceI RCATGY 1 cut(s) 847
XcmI CCANNNNNNNNNTGG 1 cut(s) 1378
XmnI GAANNNNTTC 5 cut(s) 1190, 1287, 1625, 1724, 2745
XspI CTAG 7 cut(s) 792, 1572, 1656, 2078, 2168, 2750, 2786
ZraI GACGTC 1 cut(s) 711
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.