FvH4_3g10210

LRR receptor-like serine threonine-protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0007159
Physical Location & Seq
Forward (+)
5949295 .. 5954137
4843 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g10210.t1

Sequence Viewer

Length: 3204 bp
ATGAGTATGAGGCTAGGTGGGCTTTTAGTGCTGTCCCTATTTTTCTTTTCTGCAATGGGACAGCTTCCTTCACAGGATATATTGGCGCTGCTCGCATTCAAGAAGGGTATCAAGCATGATCCTACTGGTTTTGTGCTCAGTTCTTGGAATGATGAGTCCATTGACTTCAATGGTTGTCCTGCTTCATGGAATGGGATTATATGTAATGGTGGAAATGTTGCTGGAGTTGTGCTTGATAATTTGAGTCTCTCTGCGGATGTGGACTTGAGTGTGTTTTCGAATCTGACGAAGCTTCTGAAACTTTCCATGGCCAACAATACGATATCTGGGAAATTTCCTGACAATATTGCAGACTTCAACAACCTTGAGTTTCTTGACCTCTCCAACAATTTGTTTTCTTCATCTTTACCACCTGGAATTGGTAAGTTGGGGAGCTTAAGGAACCTCTCATTAGGTGGCAACAACTTCTCAGGCTCCATTCCAGATTCCATTTCAGGGCTGTCTGCAATCCAGTCGTTGGATTTGAGTCGCAACTCCTTTTCAGGGCTGCTGCCGTCCTCATTGACAAAGCTGTCCAGTCTGGTATCTCTAAATCTTTCTTCAAATGGCTTAACCAAGAGCTTACCTAAGGGGTTTGATCTAATGTCAAGTCTAGATGTGCTTGACTTGCATGGCAATATGCTTGATGGTCCTCTGGATAAGGCATTTCTGATGGAAGCAACTGCCACACATGTTGACTTTAGTGGCAATATGTTTACAAGTTCTGGTTCACAGGGCCAGATGTTTCTACCTCGTCTTTCTGAGAGTATCAAGTACTTGAATCTTTCCCACAACCAGCTTACGGGGTCATTGGTGGGTGGCAGCGAGCTTCAGATATTTGAGAACCTGAAGGTGTTGGATCTTAGCTACAACCAGCTGTCTGGAGAATTGCCTGGATTTAATTTTGTATATGACCTCCAGGTCCTCAAACTTAGCAACAACAGATTTACTGGAGTTGTTCCCAATGGCCTAATAAAAGGAGATTCTCTGGTTTTAAGTGAACTAGATTTGAGTGGCAACAATCTGTCAGGACCAATCAACATGGTGACTTCAACAACTCTCCGCATCCTGAATCTTTCCTCGAATGGGCTTACTGGTAAGTTGCCTTTGCTGACTGGAAGTTGTGCTGTACTTGATCTATCCAAGAACAAATTCGAAGGAAATTTAACCAGGATGGTGAAATGGGGGAACATTGAATACCTTGATCTAAGTCAAAATCTTCTGACAGGACCCATCCCTGATGTCACTCCGCAGTTTATGCGTTTAAATTATCTCAATCTGTCCCATAATTCTCTTAGTAGTTCTATAGCAAGTGTTATAACACAGTATCCAAAGATCAGTGTCCTTGATCTTAGTTCTAACCAGTTAGATGGCACAGTTCTTGCTGAGTTGCTAAGCATGCCTACTCTGCAAGAGCTCCACCTTGAAAATAATTTACTCTCTGGGTCAATTAACATCTCATCTCCTTTGTTCAACCAATCAAATCTTCAGGTTCTTGATCTTTCTCAGAACCGGCTTAGTGGCTATTTTCCTGATCAATTTGGTTCACTCAATGGGCTTAAAGTGCTCGATATTGGGAGAAATAATTTTTCTGGCTCTCTGCCAACTTCCATGTCTGACATGAGCACACTAATCTCATTAGACATTTCCCAGAATCATTTCACAGGTCCCCTTCCAAATAACTTGCCAAACAGTCTTGAATTCTTTAATGCTTCATATAATGATCTTTCTGGGGATGTCCCAGAAAATCTGAGGAAGTTTCCGAGTTCTTCCTTCTTTCCAGGGAATACTCGTTTGCGGTTCCCAAATGGTGGTCCTCCTGGATCAAACAGTTCTGAATCTGAACATTCAAAAAGGAAACCATTCAGCACACTTGTCAAAGTTATTATTATAGTCTCCTGTGTGGTTGCTGTCTTCATTCTTCTTCTGCTTGCTATCTTCATTCATTACATTCGCATGTCAAGGAGAATCCCATCAGGGCATACTGCAAGCCAAGATATCCATAAACGTGCTCCACCAAACCCCTCTGGTGCTCGAGGAGCAGAGAGTGCTGGTGCTTTGGTTGTTTCGGCTGGTGATCTTGTGGCTTCACGGAAAGGATCGTCATCTGAAATTATCAGCTCTGGTGAAAAAGTCACAGCTGTAAGTGACTTCTCCCCTTCAAAGAACAGCCATTACTCTTGGTCACCAGAATCCGGAGATTCCTATATTGCGGAAAACCTTGCCAGACTGGATGTGAGATCACCAGATAGATTGGTTGGTGAGCTTCATTTTCTTGATGAAACAATTGCGTTAACACCTGAGGCGCTGTCAAGGGCTCCTGCTGAGGTTTTGGGGAGAAGCAGCCATGGCACTTCTTATAAGGCAACACTTGATAACGGGCTGTTCTTGACAGTTAAGTGGTTGAGAGAAGGGGTGGCAAAGCAGAAAAAGGAGTTTGCCAAGGAGGCTAAGAAATTTGCTAATATGAGGCATCCAAATGTTGTGGGTTTGAGAGGATACTATTGGGGACCTACACAGCATGAGAAGCTTATTCTTTCAGATTATATCTCACCTGGAAGTCTTGCAAGCTTTCTTTATGACCGACCAGGAAGAAAAGGTCCGCCATTGACCTGGGCCCAAAGACTCAAAATTGCAGTTGATGTTGCTCGTGGCCTGAACTACCTTCATTTTGATCGTGCTGTTCCGCATGGTAACCTCAAAGCAACAAATATTCTGTTGGATGGGTCTGATCTGAATGCCCGAGTTGCTGATTACTGCCTCCACCGCCTCATGACACAAGCTGGCACCATTGAACAGATTCTTGATGCTGGTGTCTTAGGCTACCGCGCCCCAGAGCTGGCTGCTTCCAAGAAGCCACTGCCCTCCTTCAAGTCCGATGTTTATGCCTTTGGAGTGATATTGTTGGAACTTTTAACTGGAAGGTGCGCTGGTGATGTGATTTCTGGCGAAGGAGGAGGGGCAGATTTGACTGATTGGGTGAGGTTGAGGGTAGCAGAAGGTCGTGGCTCAGATTGTTTTGATGCTACATTGGTGACTGAGATAGGAAATCCAGCAGCAGAGAAGGGAATGAAGGAAGTCCTTGGGATATCATTACGGTGTATACGTTCTGTTTCTGAGAGACCAGGTATTAAGACTATATATGAGGATCTCTCTTCCATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
LRRNT_2 LRR_1 LRR_6 LRR_8 Pkinase_Tyr

Protein Analysis

1068

Amino Acids

115.01

Weight (kDa)

6.29

Isoelectric Point (pI)

34.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRRNT_2 PF08263 24 - 69 9.5e-10 Leucine rich repeat N-terminal domain
LRR_14 PF23598 140 - 224 1.8e-08 Leucine-rich repeat region
LRR_8 PF13855 171 - 228 1.4e-07 Leucine rich repeat
LRR_8 PF13855 507 - 567 2.6e-10 Leucine rich repeat
PK_Tyr_Ser-Thr PF07714 789 - 986 4.7e-28 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 789 - 988 1.2e-24 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1358, 2400
AasI GACNNNNNNGTC 2 cut(s) 571, 959
AccB1I GGYRCC 1 cut(s) 2825
AccB7I CCANNNNNTGG 2 cut(s) 517, 1850
AccI GTMKAC 1 cut(s) 3142
AccII CGCG 1 cut(s) 2868
AccIII TCCGGA 1 cut(s) 2234
AciI CCGC 9 cut(s) 254, 1102, 1289, 1837, 2252, 2642, 2726, 2806, 2866
AclWI GGATC 5 cut(s) 113, 906, 1870, 2146, 3195
AcoI YGGCCR 1 cut(s) 309
AcsI RAATTY 5 cut(s) 332, 1190, 1201, 1739, 2495
AcuI CTGAAG 3 cut(s) 854, 908, 1511
AfaI GTAC 2 cut(s) 815, 1170
AfiI CCNNNNNNNGG 9 cut(s) 419, 495, 517, 543, 841, 1125, 1850, 2234, 2878
AflII CTTAAG 1 cut(s) 436
AflIII ACRYGT 1 cut(s) 730
AjuI GAANNNNNNNTTGG 4 cut(s) 1175, 1207, 1509, 1541
Alw21I GWGCWC 6 cut(s) 138, 1458, 1608, 1667, 2053, 2074
Alw26I GTCTC 3 cut(s) 251, 1939, 3154
AlwI GGATC 5 cut(s) 113, 906, 1870, 2146, 3195
Ama87I CYCGRG 2 cut(s) 2073, 2781
Aor13HI TCCGGA 1 cut(s) 2234
AoxI GGCC 5 cut(s) 309, 775, 1006, 2655, 2692
ApaI GGGCCC 1 cut(s) 2659
ApeKI GCWGC 7 cut(s) 88, 547, 550, 861, 2382, 2882, 3095
ApoI RAATTY 5 cut(s) 332, 1190, 1201, 1739, 2495
Asp700I GAANNNNTTC 4 cut(s) 1190, 1697, 1901, 2838
AspLEI GCGC 4 cut(s) 88, 2347, 2870, 2969
AsuII TTCGAA 2 cut(s) 278, 1194
AvaI CYCGRG 2 cut(s) 2073, 2781
AvaII GGWCC 8 cut(s) 689, 961, 1070, 1268, 1706, 1853, 2549, 2639
AxyI CCTNAGG 2 cut(s) 627, 2340
BaeGI GKGCMC 1 cut(s) 2659
BalI TGGCCA 1 cut(s) 311
BanI GGYRCC 1 cut(s) 2825
BanII GRGCYC 3 cut(s) 1458, 2359, 2659
BauI CACGAG 1 cut(s) 2688
BbsI GAAGAC 1 cut(s) 1945
Bbv12I GWGCWC 6 cut(s) 138, 1458, 1608, 1667, 2053, 2074
BbvCI CCTCAGC 1 cut(s) 2364
BbvI GCAGC 7 cut(s) 75, 534, 537, 873, 2394, 2869, 3107
BccI CCATC 7 cut(s) 680, 706, 1207, 1280, 1403, 2020, 2756
BceAI ACGGC 1 cut(s) 538
BcgI CGANNNNNNTGC 4 cut(s) 495, 529, 2906, 2940
BciVI GTATCC 2 cut(s) 1377, 2531
BclI TGATCA 1 cut(s) 1573
BcoDI GTCTC 3 cut(s) 251, 1939, 3154
BfaI CTAG 3 cut(s) 14, 653, 1043
BfmI CTRYAG 1 cut(s) 1344
BfoI RGCGCY 2 cut(s) 89, 2348
BfrI CTTAAG 1 cut(s) 436
BfuI GTATCC 2 cut(s) 1377, 2531
BglI GCCNNNNNGGC 1 cut(s) 2486
BisI GCNGC 7 cut(s) 89, 548, 551, 862, 2383, 2883, 3096
BlpI GCTNAGC 1 cut(s) 1433
BlsI GCNGC 7 cut(s) 90, 549, 552, 863, 2384, 2884, 3097
BmcAI AGTACT 1 cut(s) 815
Bme18I GGWCC 8 cut(s) 689, 961, 1070, 1268, 1706, 1853, 2549, 2639
BmeT110I CYCGRG 2 cut(s) 2073, 2781
BmiI GGNNCC 9 cut(s) 443, 475, 1270, 1708, 1841, 2358, 2550, 2657, 2827
BmsI GCATC 4 cut(s) 1113, 2521, 2836, 3052
BpiI GAAGAC 1 cut(s) 1945
BplI GAGNNNNNCTC 1 cut(s) 3176
BpmI CTGGAG 4 cut(s) 243, 941, 942, 1011
Bpu10I CCTNAGC 1 cut(s) 2364
Bpu1102I GCTNAGC 1 cut(s) 1433
Bpu14I TTCGAA 2 cut(s) 278, 1194
BpuEI CTTGAG 2 cut(s) 286, 386
BsaBI GATNNNNATC 1 cut(s) 2143
BsaI GGTCTC 1 cut(s) 3154
BsaJI CCNNGG 6 cut(s) 306, 1820, 2386, 2481, 2652, 3121
BsaWI WCCGGW 1 cut(s) 2234
Bsc4I CCNNNNNNNGG 9 cut(s) 419, 495, 517, 543, 841, 1125, 1850, 2234, 2878
Bse118I RCCGGY 1 cut(s) 1551
Bse1I ACTGG 9 cut(s) 130, 511, 576, 994, 1138, 1159, 1402, 2274, 2962
Bse21I CCTNAGG 2 cut(s) 627, 2340
Bse3DI GCAATG 1 cut(s) 60
Bse8I GATNNNNATC 1 cut(s) 2143
BseAI TCCGGA 1 cut(s) 2234
BseDI CCNNGG 6 cut(s) 306, 1820, 2386, 2481, 2652, 3121
BseGI GGATG 8 cut(s) 262, 1104, 1218, 1272, 1780, 2278, 2512, 2767
BseJI GATNNNNATC 1 cut(s) 2143
BseLI CCNNNNNNNGG 9 cut(s) 419, 495, 517, 543, 841, 1125, 1850, 2234, 2878
BseMI GCAATG 1 cut(s) 60
BseNI ACTGG 9 cut(s) 130, 511, 576, 994, 1138, 1159, 1402, 2274, 2962
BseRI GAGGAG 2 cut(s) 2091, 3009
BseSI GKGCMC 1 cut(s) 2659
BseXI GCAGC 7 cut(s) 75, 534, 537, 873, 2394, 2869, 3107
Bsh1236I CGCG 1 cut(s) 2868
BshFI GGCC 5 cut(s) 311, 777, 1008, 2657, 2694
BshNI GGYRCC 1 cut(s) 2825
BsiHKAI GWGCWC 6 cut(s) 138, 1458, 1608, 1667, 2053, 2074
BsiHKCI CYCGRG 2 cut(s) 2073, 2781
BsiSI CCGG 2 cut(s) 1552, 2235
BslFI GGGAC 6 cut(s) 19, 72, 1306, 1692, 1763, 2562
BslI CCNNNNNNNGG 9 cut(s) 419, 495, 517, 543, 841, 1125, 1850, 2234, 2878
BsmAI GTCTC 3 cut(s) 251, 1939, 3154
BsmFI GGGAC 6 cut(s) 19, 72, 1306, 1692, 1763, 2562
BsmI GAATGC 2 cut(s) 95, 2782
BsnI GGCC 5 cut(s) 311, 777, 1008, 2657, 2694
Bso31I GGTCTC 1 cut(s) 3154
BsoBI CYCGRG 2 cut(s) 2073, 2781
Bsp119I TTCGAA 2 cut(s) 278, 1194
Bsp120I GGGCCC 1 cut(s) 2655
Bsp1286I GDGCHC 8 cut(s) 138, 1458, 1608, 1667, 2053, 2074, 2359, 2659
Bsp13I TCCGGA 1 cut(s) 2234
Bsp1720I GCTNAGC 1 cut(s) 1433
Bsp19I CCATGG 2 cut(s) 306, 2386
BspACI CCGC 9 cut(s) 254, 1102, 1289, 1837, 2252, 2642, 2726, 2806, 2866
BspANI GGCC 5 cut(s) 311, 777, 1008, 2657, 2694
BspEI TCCGGA 1 cut(s) 2234
BspFNI CGCG 1 cut(s) 2868
BspHI TCATGA 1 cut(s) 2811
BspLI GGNNCC 9 cut(s) 443, 475, 1270, 1708, 1841, 2358, 2550, 2657, 2827
BspPI GGATC 5 cut(s) 113, 906, 1870, 2146, 3195
BspT104I TTCGAA 2 cut(s) 278, 1194
BspT107I GGYRCC 1 cut(s) 2825
BspTI CTTAAG 1 cut(s) 436
BspTNI GGTCTC 1 cut(s) 3154
BsrDI GCAATG 1 cut(s) 60
BsrFI RCCGGY 1 cut(s) 1551
BsrI ACTGG 9 cut(s) 130, 511, 576, 994, 1138, 1159, 1402, 2274, 2962
BssAI RCCGGY 1 cut(s) 1551
BssECI CCNNGG 6 cut(s) 306, 1820, 2386, 2481, 2652, 3121
BssNAI GTATAC 1 cut(s) 3143
BssSI CACGAG 1 cut(s) 2688
BssT1I CCWWGG 4 cut(s) 306, 2386, 2481, 3121
Bst1107I GTATAC 1 cut(s) 3143
Bst2BI CACGAG 1 cut(s) 2688
Bst4CI ACNGT 6 cut(s) 1365, 1417, 1733, 1871, 2434, 3138
Bst6I CTCTTC 1 cut(s) 3199
BstAFI CTTAAG 1 cut(s) 436
BstAPI GCANNNNNTGC 2 cut(s) 1297, 2087
BstBI TTCGAA 2 cut(s) 278, 1194
BstC8I GCNNGC 8 cut(s) 93, 866, 1439, 1971, 2029, 2608, 2824, 2880
BstDSI CCRYGG 2 cut(s) 306, 2386
BstEII GGTNACC 2 cut(s) 2223, 2732
BstF5I GGATG 8 cut(s) 262, 1104, 1218, 1272, 1780, 2278, 2512, 2767
BstFNI CGCG 1 cut(s) 2868
BstH2I RGCGCY 2 cut(s) 89, 2348
BstHHI GCGC 4 cut(s) 88, 2347, 2870, 2969
BstMAI GTCTC 3 cut(s) 251, 1939, 3154
BstNSI RCATGY 3 cut(s) 734, 1441, 1999
BstPI GGTNACC 2 cut(s) 2223, 2732
BstSFI CTRYAG 1 cut(s) 1344
BstSLI GKGCMC 1 cut(s) 2659
BstUI CGCG 1 cut(s) 2868
BstV1I GCAGC 7 cut(s) 75, 534, 537, 873, 2394, 2869, 3107
BstV2I GAAGAC 1 cut(s) 1945
BstX2I RGATCY 2 cut(s) 898, 3187
BstXI CCANNNNNNTGG 3 cut(s) 920, 1409, 2652
BstYI RGATCY 2 cut(s) 898, 3187
BstZ17I GTATAC 1 cut(s) 3143
Bsu36I CCTNAGG 2 cut(s) 627, 2340
BsuI GTATCC 2 cut(s) 1377, 2531
BsuRI GGCC 5 cut(s) 311, 777, 1008, 2657, 2694
BtgI CCRYGG 2 cut(s) 306, 2386
BtsCI GGATG 8 cut(s) 262, 1104, 1218, 1272, 1780, 2278, 2512, 2767
BtsI GCAGTG 1 cut(s) 2897
BtsIMutI CAGTG 2 cut(s) 1384, 2897
Cac8I GCNNGC 8 cut(s) 93, 866, 1439, 1971, 2029, 2608, 2824, 2880
CciI TCATGA 1 cut(s) 2811
CfoI GCGC 4 cut(s) 88, 2347, 2870, 2969
Cfr10I RCCGGY 1 cut(s) 1551
CsiI ACCWGGT 1 cut(s) 3163
Csp6I GTAC 2 cut(s) 814, 1169
CspCI CAANNNNNGTGG 4 cut(s) 715, 750, 2505, 2540
CviQI GTAC 2 cut(s) 814, 1169
DraI TTTAAA 1 cut(s) 1305
DrdI GACNNNNNNGTC 2 cut(s) 571, 959
DseDI GACNNNNNNGTC 2 cut(s) 571, 959
EaeI YGGCCR 1 cut(s) 309
Eam1104I CTCTTC 1 cut(s) 3199
EarI CTCTTC 1 cut(s) 3199
EciI GGCGGA 1 cut(s) 2631
Ecl136II GAGCTC 1 cut(s) 1456
Eco130I CCWWGG 4 cut(s) 306, 2386, 2481, 3121
Eco24I GRGCYC 3 cut(s) 1458, 2359, 2659
Eco31I GGTCTC 1 cut(s) 3154
Eco32I GATATC 3 cut(s) 324, 2038, 3129
Eco47I GGWCC 8 cut(s) 689, 961, 1070, 1268, 1706, 1853, 2549, 2639
Eco53kI GAGCTC 1 cut(s) 1456
Eco57I CTGAAG 3 cut(s) 854, 908, 1511
Eco81I CCTNAGG 2 cut(s) 627, 2340
Eco88I CYCGRG 2 cut(s) 2073, 2781
Eco91I GGTNACC 2 cut(s) 2223, 2732
EcoICRI GAGCTC 1 cut(s) 1456
EcoO109I RGGNCCY 4 cut(s) 961, 1268, 1706, 2549
EcoO65I GGTNACC 2 cut(s) 2223, 2732
EcoRI GAATTC 1 cut(s) 1739
EcoRV GATATC 3 cut(s) 324, 2038, 3129
EcoT14I CCWWGG 4 cut(s) 306, 2386, 2481, 3121
EcoT38I GRGCYC 3 cut(s) 1458, 2359, 2659
ErhI CCWWGG 4 cut(s) 306, 2386, 2481, 3121
FaqI GGGAC 6 cut(s) 19, 72, 1306, 1692, 1763, 2562
FbaI TGATCA 1 cut(s) 1573
FblI GTMKAC 1 cut(s) 3142
Fnu4HI GCNGC 7 cut(s) 89, 548, 551, 862, 2383, 2883, 3096
FokI GGATG 8 cut(s) 269, 1091, 1225, 1259, 1787, 2285, 2499, 2774
FriOI GRGCYC 3 cut(s) 1458, 2359, 2659
Fsp4HI GCNGC 7 cut(s) 89, 548, 551, 862, 2383, 2883, 3096
FspBI CTAG 3 cut(s) 14, 653, 1043
GlaI GCGC 4 cut(s) 87, 2346, 2869, 2968
GluI GCNGC 7 cut(s) 89, 548, 551, 862, 2383, 2883, 3096
GsuI CTGGAG 4 cut(s) 243, 941, 942, 1011
HaeII RGCGCY 2 cut(s) 89, 2348
HaeIII GGCC 5 cut(s) 311, 777, 1008, 2657, 2694
HapII CCGG 2 cut(s) 1552, 2235
HhaI GCGC 4 cut(s) 88, 2347, 2870, 2969
Hin6I GCGC 4 cut(s) 86, 2345, 2868, 2967
HinP1I GCGC 4 cut(s) 86, 2345, 2868, 2967
HincII GTYRAC 2 cut(s) 736, 2334
HindII GTYRAC 2 cut(s) 736, 2334
HindIII AAGCTT 3 cut(s) 290, 2567, 2608
HpaI GTTAAC 1 cut(s) 2334
HpaII CCGG 2 cut(s) 1552, 2235
Hpy166II GTNNAC 8 cut(s) 262, 736, 756, 770, 1040, 1586, 2334, 3143
Hpy8I GTNNAC 8 cut(s) 262, 736, 756, 770, 1040, 1586, 2334, 3143
HpyCH4III ACNGT 6 cut(s) 1365, 1417, 1733, 1871, 2434, 3138
HpyCH4IV ACGT 2 cut(s) 2047, 3145
HpyCH4V TGCA 8 cut(s) 53, 350, 506, 670, 1450, 2027, 2606, 2675
HpySE526I ACGT 2 cut(s) 2047, 3145
HspAI GCGC 4 cut(s) 86, 2345, 2868, 2967
Kpn2I TCCGGA 1 cut(s) 2234
Ksp22I TGATCA 1 cut(s) 1573
KspAI GTTAAC 1 cut(s) 2334
LmnI GCTCC 6 cut(s) 432, 479, 1461, 2056, 2078, 2362
Lsp1109I GCAGC 7 cut(s) 75, 534, 537, 873, 2394, 2869, 3107
LweI GCATC 4 cut(s) 1113, 2521, 2836, 3052
MabI ACCWGGT 1 cut(s) 3163
MaeI CTAG 3 cut(s) 14, 653, 1043
MaeII ACGT 2 cut(s) 2047, 3145
MaeIII GTNAC 7 cut(s) 1084, 1282, 2173, 2186, 2223, 2732, 3073
MfeI CAATTG 1 cut(s) 2325
MflI RGATCY 2 cut(s) 898, 3187
MhlI GDGCHC 8 cut(s) 138, 1458, 1608, 1667, 2053, 2074, 2359, 2659
MlsI TGGCCA 1 cut(s) 311
MluNI TGGCCA 1 cut(s) 311
MlyI GAGTC 4 cut(s) 164, 253, 535, 2658
MmeI TCCRAC 5 cut(s) 408, 498, 876, 2739, 2925
Mox20I TGGCCA 1 cut(s) 311
MroI TCCGGA 1 cut(s) 2234
MroXI GAANNNNTTC 4 cut(s) 1190, 1697, 1901, 2838
MscI TGGCCA 1 cut(s) 311
MslI CAYNNNNRTG 4 cut(s) 1994, 2046, 2517, 3136
Msp20I TGGCCA 1 cut(s) 311
MspA1I CMGCKG 2 cut(s) 916, 2180
MspCI CTTAAG 1 cut(s) 436
MspI CCGG 2 cut(s) 1552, 2235
MunI CAATTG 1 cut(s) 2325
Mva1269I GAATGC 2 cut(s) 95, 2782
MvnI CGCG 1 cut(s) 2868
NcoI CCATGG 2 cut(s) 306, 2386
NlaIV GGNNCC 9 cut(s) 443, 475, 1270, 1708, 1841, 2358, 2550, 2657, 2827
NmuCI GTSAC 6 cut(s) 1084, 1282, 2173, 2186, 2223, 3073
NspI RCATGY 3 cut(s) 734, 1441, 1999
NspV TTCGAA 2 cut(s) 278, 1194
PaeI GCATGC 1 cut(s) 1441
PaeR7I CTCGAG 1 cut(s) 2073
PagI TCATGA 1 cut(s) 2811
PciI ACATGT 1 cut(s) 730
PcsI WCGNNNNNNNCGW 2 cut(s) 284, 3142
PctI GAATGC 2 cut(s) 95, 2782
PdmI GAANNNNTTC 4 cut(s) 1190, 1697, 1901, 2838
PflMI CCANNNNNTGG 2 cut(s) 517, 1850
PfoI TCCNGGA 1 cut(s) 1858
PkrI GCNGC 7 cut(s) 90, 549, 552, 863, 2384, 2884, 3097
PleI GAGTC 4 cut(s) 163, 252, 534, 2658
PpsI GAGTC 4 cut(s) 163, 252, 534, 2658
PpuMI RGGWCCY 4 cut(s) 961, 1268, 1706, 2549
PscI ACATGT 1 cut(s) 730
PsiI TTATAA 2 cut(s) 1358, 2400
Psp124BI GAGCTC 1 cut(s) 1458
Psp5II RGGWCCY 4 cut(s) 961, 1268, 1706, 2549
PspEI GGTNACC 2 cut(s) 2223, 2732
PspN4I GGNNCC 9 cut(s) 443, 475, 1270, 1708, 1841, 2358, 2550, 2657, 2827
PspOMI GGGCCC 1 cut(s) 2655
PspPPI RGGWCCY 4 cut(s) 961, 1268, 1706, 2549
PspXI VCTCGAGB 1 cut(s) 2073
PsrI GAACNNNNNNTAC 4 cut(s) 1220, 1252, 2198, 2230
PsuI RGATCY 2 cut(s) 898, 3187
PvuII CAGCTG 2 cut(s) 916, 2180
RsaI GTAC 2 cut(s) 815, 1170
RsaNI GTAC 2 cut(s) 814, 1169
RseI CAYNNNNRTG 4 cut(s) 1994, 2046, 2517, 3136
SacI GAGCTC 1 cut(s) 1458
SatI GCNGC 7 cut(s) 89, 548, 551, 862, 2383, 2883, 3096
ScaI AGTACT 1 cut(s) 815
SchI GAGTC 4 cut(s) 164, 253, 535, 2658
SduI GDGCHC 8 cut(s) 138, 1458, 1608, 1667, 2053, 2074, 2359, 2659
SexAI ACCWGGT 1 cut(s) 3163
SfaNI GCATC 4 cut(s) 1113, 2521, 2836, 3052
SfcI CTRYAG 1 cut(s) 1344
Sfr274I CTCGAG 1 cut(s) 2073
SfuI TTCGAA 2 cut(s) 278, 1194
SinI GGWCC 8 cut(s) 689, 961, 1070, 1268, 1706, 1853, 2549, 2639
SlaI CTCGAG 1 cut(s) 2073
SmiMI CAYNNNNRTG 4 cut(s) 1994, 2046, 2517, 3136
SmlI CTYRAG 4 cut(s) 265, 365, 436, 2073
SmoI CTYRAG 4 cut(s) 265, 365, 436, 2073
SphI GCATGC 1 cut(s) 1441
SsiI CCGC 9 cut(s) 254, 1102, 1289, 1837, 2252, 2642, 2726, 2806, 2866
SspI AATATT 2 cut(s) 346, 2752
SspMI CTAG 3 cut(s) 14, 653, 1043
SstI GAGCTC 1 cut(s) 1458
StyI CCWWGG 4 cut(s) 306, 2386, 2481, 3121
TaaI ACNGT 6 cut(s) 1365, 1417, 1733, 1871, 2434, 3138
TaiI ACGT 2 cut(s) 2050, 3148
TaqI TCGA 5 cut(s) 278, 1121, 1194, 1608, 2074
TaqII GACCGA 1 cut(s) 2637
TatI WGTACW 2 cut(s) 813, 1168
TscAI CASTG 2 cut(s) 1384, 2904
TseFI GTSAC 6 cut(s) 1084, 1282, 2173, 2186, 2223, 3073
TseI GCWGC 7 cut(s) 88, 547, 550, 861, 2382, 2882, 3095
Tsp45I GTSAC 6 cut(s) 1084, 1282, 2173, 2186, 2223, 3073
TspGWI ACGGA 1 cut(s) 2146
TspRI CASTG 2 cut(s) 1384, 2904
Van91I CCANNNNNTGG 2 cut(s) 517, 1850
Vha464I CTTAAG 1 cut(s) 436
VpaK11BI GGWCC 8 cut(s) 689, 961, 1070, 1268, 1706, 1853, 2549, 2639
XapI RAATTY 5 cut(s) 332, 1190, 1201, 1739, 2495
XbaI TCTAGA 1 cut(s) 652
XceI RCATGY 3 cut(s) 734, 1441, 1999
XhoI CTCGAG 1 cut(s) 2073
XmiI GTMKAC 1 cut(s) 3142
XmnI GAANNNNTTC 4 cut(s) 1190, 1697, 1901, 2838
XspI CTAG 3 cut(s) 14, 653, 1043
ZrmI AGTACT 1 cut(s) 815
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.