damaged dna binding protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G05420 AT4G05420 AT4G21100 |
| fragaria_vesca | FvH4_3g09700 FvH4_3g09700 |
| malus_domestica | MD00G1109600.v1.1 MD05G1276000.v1.1 |
| prunus_persica | Prupe.4G088300_v2.0.a1 Prupe.4G088300_v2.0.a1 |
| pyrus_communis | pycom05g25700 pycom10g21110 |
| rosa_chinensis | RchiOBHm_Chr5g0015371 |
| rosa_laevigata | RLG00000032196 |
| rosa_multiflora | Rmu_sc0017755.1_g000009 Rmu_ssc0000085.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00061090 |
| rosa_rugosa | Rorug05G0026900 |
| rosa_samantha | Rh5AG120500 Rh5BG119300 Rh5CG129900 Rh5DG118500 |
| rosa_wichuraiana | Rw5G010420 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 845 |
| AarI | CACCTGC | 1 cut(s) | 843 |
| AasI | GACNNNNNNGTC | 3 cut(s) | 935, 2342, 2595 |
| Acc36I | ACCTGC | 3 cut(s) | 475, 843, 996 |
| Acc65I | GGTACC | 1 cut(s) | 2087 |
| AccB1I | GGYRCC | 1 cut(s) | 2087 |
| AccI | GTMKAC | 2 cut(s) | 1279, 1371 |
| AccII | CGCG | 1 cut(s) | 2568 |
| AciI | CCGC | 5 cut(s) | 1438, 1842, 2551, 2899, 3122 |
| AclWI | GGATC | 3 cut(s) | 118, 365, 652 |
| AcoI | YGGCCR | 1 cut(s) | 1509 |
| AcsI | RAATTY | 4 cut(s) | 257, 1020, 1399, 2882 |
| AcuI | CTGAAG | 2 cut(s) | 134, 1359 |
| AcyI | GRCGYC | 2 cut(s) | 684, 1175 |
| AfaI | GTAC | 8 cut(s) | 537, 666, 1386, 1589, 1900, 2089, 2362, 2779 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 176, 680, 994, 2245, 2399 |
| AflIII | ACRYGT | 1 cut(s) | 1573 |
| AjnI | CCWGG | 1 cut(s) | 1497 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 739, 771, 2067, 2099 |
| Alw21I | GWGCWC | 3 cut(s) | 1798, 2716, 2848 |
| Alw26I | GTCTC | 5 cut(s) | 1075, 1797, 2625, 3003, 3141 |
| AlwI | GGATC | 3 cut(s) | 118, 365, 652 |
| Ama87I | CYCGRG | 2 cut(s) | 2378, 2715 |
| AoxI | GGCC | 4 cut(s) | 334, 871, 1046, 1509 |
| ApeKI | GCWGC | 8 cut(s) | 1649, 1934, 2036, 2319, 2440, 2548, 2572, 2923 |
| ApoI | RAATTY | 4 cut(s) | 257, 1020, 1399, 2882 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 218, 250 |
| AseI | ATTAAT | 1 cut(s) | 2517 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2894 |
| Asp718I | GGTACC | 1 cut(s) | 2087 |
| AspS9I | GGNCC | 3 cut(s) | 487, 614, 1046 |
| AsuHPI | GGTGA | 9 cut(s) | 227, 663, 824, 824, 905, 1634, 2660, 2794, 2876 |
| AsuNHI | GCTAGC | 1 cut(s) | 1645 |
| AvaI | CYCGRG | 2 cut(s) | 2378, 2715 |
| AvaII | GGWCC | 2 cut(s) | 487, 614 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2399, 2432 |
| BalI | TGGCCA | 1 cut(s) | 1511 |
| BanI | GGYRCC | 1 cut(s) | 2087 |
| BanII | GRGCYC | 1 cut(s) | 2716 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1967, 1999 |
| BauI | CACGAG | 2 cut(s) | 2687, 3083 |
| BbsI | GAAGAC | 1 cut(s) | 1921 |
| Bbv12I | GWGCWC | 3 cut(s) | 1798, 2716, 2848 |
| BbvI | GCAGC | 8 cut(s) | 1636, 1921, 2023, 2306, 2452, 2535, 2559, 2910 |
| BceAI | ACGGC | 5 cut(s) | 5, 42, 424, 1637, 2757 |
| BcgI | CGANNNNNNTGC | 8 cut(s) | 626, 660, 2129, 2163, 2192, 2226, 2678, 2712 |
| BciT130I | CCWGG | 1 cut(s) | 1499 |
| BciVI | GTATCC | 2 cut(s) | 1825, 2400 |
| BcoDI | GTCTC | 5 cut(s) | 1075, 1797, 2625, 3003, 3141 |
| BfmI | CTRYAG | 2 cut(s) | 2829, 3035 |
| BfuAI | ACCTGC | 3 cut(s) | 475, 843, 996 |
| BfuI | GTATCC | 2 cut(s) | 1825, 2400 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 26 |
| BglII | AGATCT | 1 cut(s) | 3195 |
| BisI | GCNGC | 8 cut(s) | 1650, 1935, 2037, 2320, 2441, 2549, 2573, 2924 |
| BlsI | GCNGC | 8 cut(s) | 1651, 1936, 2038, 2321, 2442, 2550, 2574, 2925 |
| BmcAI | AGTACT | 1 cut(s) | 537 |
| Bme1390I | CCNGG | 1 cut(s) | 1499 |
| Bme18I | GGWCC | 2 cut(s) | 487, 614 |
| BmeT110I | CYCGRG | 2 cut(s) | 2378, 2715 |
| BmgT120I | GGNCC | 3 cut(s) | 487, 614, 1046 |
| BmiI | GGNNCC | 2 cut(s) | 1047, 2089 |
| BmrFI | CCNGG | 1 cut(s) | 1499 |
| BmrI | ACTGGG | 1 cut(s) | 1883 |
| BmtI | GCTAGC | 1 cut(s) | 1649 |
| BmuI | ACTGGG | 1 cut(s) | 1883 |
| BoxI | GACNNNNGTC | 2 cut(s) | 44, 351 |
| BpiI | GAAGAC | 1 cut(s) | 1921 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3182, 3214 |
| BpmI | CTGGAG | 3 cut(s) | 494, 1134, 1536 |
| BpuEI | CTTGAG | 4 cut(s) | 66, 434, 1097, 2991 |
| Bsa29I | ATCGAT | 1 cut(s) | 2094 |
| BsaAI | YACGTR | 1 cut(s) | 2617 |
| BsaHI | GRCGYC | 2 cut(s) | 684, 1175 |
| BsaI | GGTCTC | 1 cut(s) | 3141 |
| BsaJI | CCNNGG | 8 cut(s) | 211, 617, 1179, 2379, 2463, 2626, 2773, 2902 |
| BsaWI | WCCGGW | 1 cut(s) | 994 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 176, 680, 994, 2245, 2399 |
| Bse1I | ACTGG | 7 cut(s) | 165, 874, 1311, 1519, 1825, 1878, 2738 |
| Bse3DI | GCAATG | 2 cut(s) | 315, 1156 |
| BseBI | CCWGG | 1 cut(s) | 1499 |
| BseCI | ATCGAT | 1 cut(s) | 2094 |
| BseDI | CCNNGG | 8 cut(s) | 211, 617, 1179, 2379, 2463, 2626, 2773, 2902 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 176, 680, 994, 2245, 2399 |
| BseMI | GCAATG | 2 cut(s) | 315, 1156 |
| BseMII | CTCAG | 3 cut(s) | 44, 282, 3038 |
| BseNI | ACTGG | 7 cut(s) | 165, 874, 1311, 1519, 1825, 1878, 2738 |
| BseRI | GAGGAG | 4 cut(s) | 491, 1746, 2720, 3206 |
| BseXI | GCAGC | 8 cut(s) | 1636, 1921, 2023, 2306, 2452, 2535, 2559, 2910 |
| BseYI | CCCAGC | 1 cut(s) | 1456 |
| BsgI | GTGCAG | 2 cut(s) | 2232, 2639 |
| Bsh1236I | CGCG | 1 cut(s) | 2568 |
| Bsh1285I | CGRYCG | 2 cut(s) | 341, 2703 |
| BshFI | GGCC | 4 cut(s) | 336, 873, 1048, 1511 |
| BshNI | GGYRCC | 1 cut(s) | 2087 |
| BshVI | ATCGAT | 1 cut(s) | 2094 |
| BsiEI | CGRYCG | 2 cut(s) | 341, 2703 |
| BsiHKAI | GWGCWC | 3 cut(s) | 1798, 2716, 2848 |
| BsiHKCI | CYCGRG | 2 cut(s) | 2378, 2715 |
| BsiSI | CCGG | 2 cut(s) | 822, 995 |
| BslFI | GGGAC | 6 cut(s) | 159, 192, 1567, 1891, 2007, 2732 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 176, 680, 994, 2245, 2399 |
| BsmAI | GTCTC | 5 cut(s) | 1075, 1797, 2625, 3003, 3141 |
| BsmBI | CGTCTC | 2 cut(s) | 1797, 3003 |
| BsmFI | GGGAC | 6 cut(s) | 159, 192, 1567, 1891, 2007, 2732 |
| BsmI | GAATGC | 1 cut(s) | 731 |
| BsnI | GGCC | 4 cut(s) | 336, 873, 1048, 1511 |
| Bso31I | GGTCTC | 1 cut(s) | 3141 |
| BsoBI | CYCGRG | 2 cut(s) | 2378, 2715 |
| Bsp1286I | GDGCHC | 3 cut(s) | 1798, 2716, 2848 |
| Bsp1407I | TGTACA | 1 cut(s) | 1384 |
| Bsp19I | CCATGG | 3 cut(s) | 211, 617, 2902 |
| Bsp68I | TCGCGA | 1 cut(s) | 2568 |
| BspACI | CCGC | 5 cut(s) | 1438, 1842, 2551, 2899, 3122 |
| BspANI | GGCC | 4 cut(s) | 336, 873, 1048, 1511 |
| BspCNI | CTCAG | 3 cut(s) | 43, 283, 3039 |
| BspDI | ATCGAT | 1 cut(s) | 2094 |
| BspFNI | CGCG | 1 cut(s) | 2568 |
| BspHI | TCATGA | 2 cut(s) | 2655, 2916 |
| BspLI | GGNNCC | 2 cut(s) | 1047, 2089 |
| BspMAI | CTGCAG | 1 cut(s) | 3039 |
| BspMI | ACCTGC | 3 cut(s) | 475, 843, 996 |
| BspOI | GCTAGC | 1 cut(s) | 1649 |
| BspPI | GGATC | 3 cut(s) | 118, 365, 652 |
| BspT107I | GGYRCC | 1 cut(s) | 2087 |
| BspTNI | GGTCTC | 1 cut(s) | 3141 |
| BsrDI | GCAATG | 2 cut(s) | 315, 1156 |
| BsrGI | TGTACA | 1 cut(s) | 1384 |
| BsrI | ACTGG | 7 cut(s) | 165, 874, 1311, 1519, 1825, 1878, 2738 |
| BssECI | CCNNGG | 8 cut(s) | 211, 617, 1179, 2379, 2463, 2626, 2773, 2902 |
| BssNAI | GTATAC | 1 cut(s) | 1280 |
| BssNI | GRCGYC | 2 cut(s) | 684, 1175 |
| BssSI | CACGAG | 2 cut(s) | 2687, 3083 |
| BssT1I | CCWWGG | 4 cut(s) | 211, 617, 2463, 2902 |
| Bst1107I | GTATAC | 1 cut(s) | 1280 |
| Bst2BI | CACGAG | 2 cut(s) | 2687, 3083 |
| Bst2UI | CCWGG | 1 cut(s) | 1499 |
| Bst4CI | ACNGT | 8 cut(s) | 1640, 1808, 2051, 2597, 2806, 2956, 2971, 3015 |
| Bst6I | CTCTTC | 3 cut(s) | 772, 1140, 3219 |
| BstACI | GRCGYC | 2 cut(s) | 684, 1175 |
| BstAUI | TGTACA | 1 cut(s) | 1384 |
| BstBAI | YACGTR | 1 cut(s) | 2617 |
| BstC8I | GCNNGC | 4 cut(s) | 1495, 1647, 2142, 2570 |
| BstDEI | CTNAG | 6 cut(s) | 30, 291, 1716, 2397, 3047, 3077 |
| BstDSI | CCRYGG | 5 cut(s) | 211, 617, 1179, 2626, 2902 |
| BstEII | GGTNACC | 2 cut(s) | 812, 1390 |
| BstFNI | CGCG | 1 cut(s) | 2568 |
| BstMAI | GTCTC | 5 cut(s) | 1075, 1797, 2625, 3003, 3141 |
| BstMCI | CGRYCG | 2 cut(s) | 341, 2703 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 26, 737, 979, 988, 1146 |
| BstNI | CCWGG | 1 cut(s) | 1499 |
| BstNSI | RCATGY | 3 cut(s) | 1577, 1928, 2144 |
| BstPAI | GACNNNNGTC | 2 cut(s) | 44, 351 |
| BstPI | GGTNACC | 2 cut(s) | 812, 1390 |
| BstSCI | CCNGG | 1 cut(s) | 1497 |
| BstSFI | CTRYAG | 2 cut(s) | 2829, 3035 |
| BstUI | CGCG | 1 cut(s) | 2568 |
| BstV1I | GCAGC | 8 cut(s) | 1636, 1921, 2023, 2306, 2452, 2535, 2559, 2910 |
| BstV2I | GAAGAC | 1 cut(s) | 1921 |
| BstX2I | RGATCY | 2 cut(s) | 123, 3195 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3208 |
| BstYI | RGATCY | 2 cut(s) | 123, 3195 |
| BstZ17I | GTATAC | 1 cut(s) | 1280 |
| Bsu15I | ATCGAT | 1 cut(s) | 2094 |
| BsuI | GTATCC | 2 cut(s) | 1825, 2400 |
| BsuRI | GGCC | 4 cut(s) | 336, 873, 1048, 1511 |
| BsuTUI | ATCGAT | 1 cut(s) | 2094 |
| BtgI | CCRYGG | 5 cut(s) | 211, 617, 1179, 2626, 2902 |
| BtgZI | GCGATG | 1 cut(s) | 2623 |
| BtsI | GCAGTG | 1 cut(s) | 3095 |
| BtsIMutI | CAGTG | 8 cut(s) | 867, 1273, 1512, 1871, 2967, 2980, 3095, 3262 |
| BtuMI | TCGCGA | 1 cut(s) | 2568 |
| BveI | ACCTGC | 3 cut(s) | 475, 843, 996 |
| Cac8I | GCNNGC | 4 cut(s) | 1495, 1647, 2142, 2570 |
| CciI | TCATGA | 2 cut(s) | 2655, 2916 |
| Cfr13I | GGNCC | 3 cut(s) | 487, 614, 1046 |
| ClaI | ATCGAT | 1 cut(s) | 2094 |
| CseI | GACGC | 4 cut(s) | 49, 673, 1164, 2985 |
| Csp6I | GTAC | 8 cut(s) | 536, 665, 1385, 1588, 1899, 2088, 2361, 2778 |
| CviQI | GTAC | 8 cut(s) | 536, 665, 1385, 1588, 1899, 2088, 2361, 2778 |
| DdeI | CTNAG | 6 cut(s) | 30, 291, 1716, 2397, 3047, 3077 |
| DrdI | GACNNNNNNGTC | 3 cut(s) | 935, 2342, 2595 |
| DseDI | GACNNNNNNGTC | 3 cut(s) | 935, 2342, 2595 |
| EaeI | YGGCCR | 1 cut(s) | 1509 |
| Eam1104I | CTCTTC | 3 cut(s) | 772, 1140, 3219 |
| EarI | CTCTTC | 3 cut(s) | 772, 1140, 3219 |
| EciI | GGCGGA | 1 cut(s) | 2888 |
| Ecl136II | GAGCTC | 1 cut(s) | 2714 |
| Eco130I | CCWWGG | 4 cut(s) | 211, 617, 2463, 2902 |
| Eco24I | GRGCYC | 1 cut(s) | 2716 |
| Eco31I | GGTCTC | 1 cut(s) | 3141 |
| Eco32I | GATATC | 2 cut(s) | 496, 1779 |
| Eco47I | GGWCC | 2 cut(s) | 487, 614 |
| Eco53kI | GAGCTC | 1 cut(s) | 2714 |
| Eco57I | CTGAAG | 2 cut(s) | 134, 1359 |
| Eco88I | CYCGRG | 2 cut(s) | 2378, 2715 |
| Eco91I | GGTNACC | 2 cut(s) | 812, 1390 |
| EcoICRI | GAGCTC | 1 cut(s) | 2714 |
| EcoO109I | RGGNCCY | 2 cut(s) | 487, 1046 |
| EcoO65I | GGTNACC | 2 cut(s) | 812, 1390 |
| EcoRII | CCWGG | 1 cut(s) | 1497 |
| EcoRV | GATATC | 2 cut(s) | 496, 1779 |
| EcoT14I | CCWWGG | 4 cut(s) | 211, 617, 2463, 2902 |
| EcoT22I | ATGCAT | 1 cut(s) | 733 |
| EcoT38I | GRGCYC | 1 cut(s) | 2716 |
| ErhI | CCWWGG | 4 cut(s) | 211, 617, 2463, 2902 |
| Esp3I | CGTCTC | 2 cut(s) | 1797, 3003 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 443, 475, 2266, 2298, 3122, 3154 |
| FaqI | GGGAC | 6 cut(s) | 159, 192, 1567, 1891, 2007, 2732 |
| FauI | CCCGC | 2 cut(s) | 1835, 2544 |
| FauNDI | CATATG | 5 cut(s) | 577, 772, 1012, 2016, 2368 |
| FblI | GTMKAC | 2 cut(s) | 1279, 1371 |
| Fnu4HI | GCNGC | 8 cut(s) | 1650, 1935, 2037, 2320, 2441, 2549, 2573, 2924 |
| FriOI | GRGCYC | 1 cut(s) | 2716 |
| Fsp4HI | GCNGC | 8 cut(s) | 1650, 1935, 2037, 2320, 2441, 2549, 2573, 2924 |
| GluI | GCNGC | 8 cut(s) | 1650, 1935, 2037, 2320, 2441, 2549, 2573, 2924 |
| GsaI | CCCAGC | 1 cut(s) | 1460 |
| GsuI | CTGGAG | 3 cut(s) | 494, 1134, 1536 |
| HaeIII | GGCC | 4 cut(s) | 336, 873, 1048, 1511 |
| HapII | CCGG | 2 cut(s) | 822, 995 |
| HgaI | GACGC | 4 cut(s) | 49, 673, 1164, 2985 |
| Hin1I | GRCGYC | 2 cut(s) | 684, 1175 |
| HincII | GTYRAC | 2 cut(s) | 1039, 1072 |
| HindII | GTYRAC | 2 cut(s) | 1039, 1072 |
| HindIII | AAGCTT | 1 cut(s) | 2108 |
| HpaII | CCGG | 2 cut(s) | 822, 995 |
| HphI | GGTGA | 9 cut(s) | 227, 663, 824, 824, 905, 1634, 2660, 2794, 2876 |
| Hpy166II | GTNNAC | 8 cut(s) | 1039, 1072, 1280, 1372, 1665, 2328, 2588, 2890 |
| Hpy8I | GTNNAC | 8 cut(s) | 1039, 1072, 1280, 1372, 1665, 2328, 2588, 2890 |
| Hpy99I | CGWCG | 3 cut(s) | 65, 1658, 2151 |
| HpyCH4III | ACNGT | 8 cut(s) | 1640, 1808, 2051, 2597, 2806, 2956, 2971, 3015 |
| HpyCH4IV | ACGT | 3 cut(s) | 1992, 2616, 2842 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 26, 737, 979, 988, 1146 |
| HpyF3I | CTNAG | 6 cut(s) | 30, 291, 1716, 2397, 3047, 3077 |
| HpySE526I | ACGT | 3 cut(s) | 1992, 2616, 2842 |
| Hsp92I | GRCGYC | 2 cut(s) | 684, 1175 |
| KpnI | GGTACC | 1 cut(s) | 2091 |
| LmnI | GCTCC | 3 cut(s) | 1115, 2312, 2468 |
| Lsp1109I | GCAGC | 8 cut(s) | 1636, 1921, 2023, 2306, 2452, 2535, 2559, 2910 |
| MaeII | ACGT | 3 cut(s) | 1992, 2616, 2842 |
| MfeI | CAATTG | 5 cut(s) | 528, 708, 1224, 2058, 2082 |
| MflI | RGATCY | 2 cut(s) | 123, 3195 |
| MhlI | GDGCHC | 3 cut(s) | 1798, 2716, 2848 |
| MlsI | TGGCCA | 1 cut(s) | 1511 |
| MluNI | TGGCCA | 1 cut(s) | 1511 |
| MlyI | GAGTC | 4 cut(s) | 293, 1699, 1873, 3052 |
| MmeI | TCCRAC | 3 cut(s) | 1563, 1809, 2129 |
| Mox20I | TGGCCA | 1 cut(s) | 1511 |
| Mph1103I | ATGCAT | 1 cut(s) | 733 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2894 |
| MscI | TGGCCA | 1 cut(s) | 1511 |
| MseI | TTAA | 8 cut(s) | 417, 462, 978, 1473, 1817, 1850, 2517, 3060 |
| MslI | CAYNNNNRTG | 2 cut(s) | 402, 676 |
| Msp20I | TGGCCA | 1 cut(s) | 1511 |
| MspA1I | CMGCKG | 2 cut(s) | 1460, 1952 |
| MspI | CCGG | 2 cut(s) | 822, 995 |
| MspR9I | CCNGG | 1 cut(s) | 1499 |
| MunI | CAATTG | 5 cut(s) | 528, 708, 1224, 2058, 2082 |
| Mva1269I | GAATGC | 1 cut(s) | 731 |
| MvaI | CCWGG | 1 cut(s) | 1499 |
| MvnI | CGCG | 1 cut(s) | 2568 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 26, 737, 979, 988, 1146 |
| NcoI | CCATGG | 3 cut(s) | 211, 617, 2902 |
| NdeI | CATATG | 5 cut(s) | 577, 772, 1012, 2016, 2368 |
| NheI | GCTAGC | 1 cut(s) | 1645 |
| NlaIV | GGNNCC | 2 cut(s) | 1047, 2089 |
| NmuCI | GTSAC | 5 cut(s) | 46, 621, 812, 865, 2597 |
| NruI | TCGCGA | 1 cut(s) | 2568 |
| NsiI | ATGCAT | 1 cut(s) | 733 |
| NspI | RCATGY | 3 cut(s) | 1577, 1928, 2144 |
| PaeI | GCATGC | 1 cut(s) | 2144 |
| PagI | TCATGA | 2 cut(s) | 2655, 2916 |
| PaqCI | CACCTGC | 1 cut(s) | 843 |
| PciI | ACATGT | 1 cut(s) | 1573 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 334, 1217 |
| PctI | GAATGC | 1 cut(s) | 731 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2894 |
| PkrI | GCNGC | 8 cut(s) | 1651, 1936, 2038, 2321, 2442, 2550, 2574, 2925 |
| Ple19I | CGATCG | 1 cut(s) | 2703 |
| PleI | GAGTC | 4 cut(s) | 292, 1699, 1873, 3051 |
| PpsI | GAGTC | 4 cut(s) | 292, 1699, 1873, 3051 |
| Ppu21I | YACGTR | 1 cut(s) | 2617 |
| PpuMI | RGGWCCY | 1 cut(s) | 487 |
| PscI | ACATGT | 1 cut(s) | 1573 |
| PshAI | GACNNNNGTC | 2 cut(s) | 44, 351 |
| PshBI | ATTAAT | 1 cut(s) | 2517 |
| PsiI | TTATAA | 1 cut(s) | 845 |
| Psp124BI | GAGCTC | 1 cut(s) | 2716 |
| Psp5II | RGGWCCY | 1 cut(s) | 487 |
| Psp6I | CCWGG | 1 cut(s) | 1497 |
| PspEI | GGTNACC | 2 cut(s) | 812, 1390 |
| PspFI | CCCAGC | 1 cut(s) | 1456 |
| PspGI | CCWGG | 1 cut(s) | 1497 |
| PspN4I | GGNNCC | 2 cut(s) | 1047, 2089 |
| PspPI | GGNCC | 3 cut(s) | 487, 614, 1046 |
| PspPPI | RGGWCCY | 1 cut(s) | 487 |
| PstI | CTGCAG | 1 cut(s) | 3039 |
| PsuI | RGATCY | 2 cut(s) | 123, 3195 |
| PvuI | CGATCG | 1 cut(s) | 2703 |
| PvuII | CAGCTG | 2 cut(s) | 1460, 1952 |
| RruI | TCGCGA | 1 cut(s) | 2568 |
| RsaI | GTAC | 8 cut(s) | 537, 666, 1386, 1589, 1900, 2089, 2362, 2779 |
| RsaNI | GTAC | 8 cut(s) | 536, 665, 1385, 1588, 1899, 2088, 2361, 2778 |
| RseI | CAYNNNNRTG | 2 cut(s) | 402, 676 |
| SacI | GAGCTC | 1 cut(s) | 2716 |
| SaqAI | TTAA | 8 cut(s) | 417, 462, 978, 1473, 1817, 1850, 2517, 3060 |
| SatI | GCNGC | 8 cut(s) | 1650, 1935, 2037, 2320, 2441, 2549, 2573, 2924 |
| Sau96I | GGNCC | 3 cut(s) | 487, 614, 1046 |
| ScaI | AGTACT | 1 cut(s) | 537 |
| SchI | GAGTC | 4 cut(s) | 293, 1699, 1873, 3052 |
| ScrFI | CCNGG | 1 cut(s) | 1499 |
| SduI | GDGCHC | 3 cut(s) | 1798, 2716, 2848 |
| SfcI | CTRYAG | 2 cut(s) | 2829, 3035 |
| SinI | GGWCC | 2 cut(s) | 487, 614 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 402, 676 |
| SmlI | CTYRAG | 4 cut(s) | 81, 449, 1076, 3006 |
| SmoI | CTYRAG | 4 cut(s) | 81, 449, 1076, 3006 |
| SphI | GCATGC | 1 cut(s) | 2144 |
| SsiI | CCGC | 5 cut(s) | 1438, 1842, 2551, 2899, 3122 |
| SstI | GAGCTC | 1 cut(s) | 2716 |
| StyD4I | CCNGG | 1 cut(s) | 1497 |
| StyI | CCWWGG | 4 cut(s) | 211, 617, 2463, 2902 |
| TaaI | ACNGT | 8 cut(s) | 1640, 1808, 2051, 2597, 2806, 2956, 2971, 3015 |
| TaiI | ACGT | 3 cut(s) | 1995, 2619, 2845 |
| TaqI | TCGA | 9 cut(s) | 115, 120, 609, 636, 1056, 1882, 2094, 2262, 2703 |
| TaqII | GACCGA | 1 cut(s) | 355 |
| TatI | WGTACW | 2 cut(s) | 535, 1384 |
| Tru1I | TTAA | 8 cut(s) | 417, 462, 978, 1473, 1817, 1850, 2517, 3060 |
| Tru9I | TTAA | 8 cut(s) | 417, 462, 978, 1473, 1817, 1850, 2517, 3060 |
| TscAI | CASTG | 7 cut(s) | 874, 1273, 1519, 1878, 2974, 2980, 3095 |
| TseFI | GTSAC | 5 cut(s) | 46, 621, 812, 865, 2597 |
| TseI | GCWGC | 8 cut(s) | 1649, 1934, 2036, 2319, 2440, 2548, 2572, 2923 |
| Tsp45I | GTSAC | 5 cut(s) | 46, 621, 812, 865, 2597 |
| TspGWI | ACGGA | 4 cut(s) | 194, 1168, 1577, 2228 |
| TspRI | CASTG | 7 cut(s) | 874, 1273, 1519, 1878, 2974, 2980, 3095 |
| VpaK11BI | GGWCC | 2 cut(s) | 487, 614 |
| VspI | ATTAAT | 1 cut(s) | 2517 |
| XapI | RAATTY | 4 cut(s) | 257, 1020, 1399, 2882 |
| XbaI | TCTAGA | 2 cut(s) | 1537, 3025 |
| XceI | RCATGY | 3 cut(s) | 1577, 1928, 2144 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 922 |
| XmiI | GTMKAC | 2 cut(s) | 1279, 1371 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2894 |
| ZrmI | AGTACT | 1 cut(s) | 537 |
| Zsp2I | ATGCAT | 1 cut(s) | 733 |