Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0009295

Physical Location & Seq

Genomic Coordinates Reverse (-)

23828988 .. 23837631

Gene Structure 8644 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom10g21110.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3207 bp

ATGAGCGTATGGAACTACGTCGTAACGGCTCACAAGCCCACCAACGTCACACACTCCTGCGTCGGCAACTTCACCGCCCCTCAGGAGCTCAATCTCATCACTGCGAAATGTACGCGAATTGAAATTCAGCTACTTACTCCTCTGGGACTGCAGCCTATCTTGGATGTTCCAATATATGGAAGAATAGCGACGCTTGAACTTTTCCGGCCTCATGGTGAAACACAGGATTTTCTATTTATTGCAACAGAAAGGTACAAATTTTGTGTTCTTCAGTGGGATGCCGAAGCATCTGAGCTCATCACAAGGGCAATGGGGGATGTCTCAGATCGCATAGGTCGTCCTACAGACAATGGTCAAGTTATTCCTTTTGATAATAAAGGGCAGCTCAAGGAAGCATTTAATATACGGCTTGAGGAACTTCAAGTTTTGGATATCAAGTTTCTATATGGTTGTTCAAAACCAACAATTGTAGTTCTATATCAGGATAATAAAGATGTTCGCCATGTCAAAACATATGAGGTTTCTCTGAAGGATAAGGATTTTGTCGAAGGTCCTTGGGCACAGAACAACGTTGAAAATGGGGCTGATTTGTTAATACCGGTTCCTCCGCCACTCTGTGGTGTTCTTATTATTGGAGAAGATAATATTGTTTACCGCAGCCCGAATACATTTAAAGCAATCCCAATAAGACATTCCATCACAAGAGCCTATGGGAGAGTAGATGCAGATGGTTCCAGGTATTTACTTGGTGATCATGCCGGGCTACTTCACCTACTTGTTATAACGCATGAGAAAGAAAAGGTGACTGGACTGAAAATTGAGCTCTTGGGGGAGACATCAATTGCATCTACTATTTCATACCTTGATAATGCATTTGTCTATATCGGATCAAGTTATGGGGATTCACAGCTTGTAAAGCTAAATCTACAGCCTGATGCAAAGGGTTCATATGTGGAAGTCTTAGAAAGGTATGTCAATTTGGGGCCGATCGTTGACTTTTGTGTGGTCGATCTTGAGAGGCAAGGCCAAGGTCAGGTTGTGACTTGTTCTGGAGCTTTCAAGGATGGTTCTCTTCGTGTAGTTCGGAATGGAATTGGAATCAATGAACAGGCATCAGTTGAGCTTCAAGGTATCAAGGGAATGTGGTCATTAAGATCCTCCACTGATGATCCTTTTGACACCTTCCTGGTTGTAAGCTTTATCAGTGAGACAAGGATTTTGGCAATGAATCTTGAGGATGAGTTGGAAGAAACTGAGATAGAAGGCTTCTGTTCTCAAGTTCAGACTTTATTTTGCCACGATGCCGTCTGTAATCAACTGGTACAGGTCACTTCAAGCTCTGTACGACTAGTCAGTTCTACAACCAGGGAGCTCAAGCATGAGTGGAATGCTCCAGCAGGCAATTCGATTAATGTTGCCACTGCTAATGCCACCCAGGTTTTATTGGCGACTGGTGGAAAGCATTTAGTTTATTTGGAAATAGGTGATGGGGTATTGACAGAGAAAAACCACGCACAGTTAGATTTTGAGATATCATGCCTTGACATAAACCCCATAGGCGACAATCCCAACTATAGCCAGCTGGCAGCTGTTGGAATGTGGACAGATATTAGTGTCCAGATATATTCACTTCCTGACCTGAGCCGCATCACAAAGGAACATTTGGCATGGGAGATCATACCTCGTTCTGTTCTTCTTTGTGCCTTTGAAGGGATATCCTACCTATTGTGTGCCCTTGGAGATGGGCACCTCTTAAACTTTATTTTGAACACAAGCACTGGTGAGTTGACGGACAGGAAAAAAGTCTCACTTGGGACGCAACCCATTACACTCCGTACCTTCTCATCCAAGAGTACTACGCATGTATTTGCTGCATCGGATAGGCCAACTGTCATCTATAGTAGCAACAAGAAATTGCTTTACAGCAACGTAAATCTGAAAGAAGTCAGCCATATGTGCCCATTCAACTCTGCTGCTTTTCCAGACAGCCTTGCAATTGCTAAGGAAGGTGAACTTACTATTGGCACAATTGATGACATCCAGAAGCTTCATATTCGCTCTATTCCCCTAGGCGAACATGCACGACGTATCTGTCATCAGGAGCAGTCCAGGACTTTCGCCATTTTGAGTGTGAAATATAACCAGTCTAGTGCAGAAGACTCAGAAACACACTTCATCCGATTGTTGGATGACCAGAGTTTTGACCTCATAACATTTTATCAACTGGACACTTTTGAGTATGCCTGCTCTATACTTAGCTGTTCTTTCTCAGATGACAGTAATTTATATTACTGTGTCGGGACTGCATATGTTCTCCCGGAAGAAAATGAGCCAACCAAGGGCCGCATTCTGGTTTTCATTGTTGAAGATGGGAAGCTGCAGCTCGTTGCTGAGAAGGAAACCAAGGGGTCTGTTTACTCGTTGAATGCGTTCAATGGCAAGTTACTTGCTGCTATTAATCAGAAGATACAGTTATACAAGTGGACTCTGCGGGACGATGGTACTCGTGAATTGCAATCGGAATGTGGACACCATGGCCACATACTTGCCCTTTATGTCCAGACTCGTGGAGATTTCATCATTGTTGGGGACTTAATGAAGTCAATTTCTCTGTTAATGTACAAGCATGAGGAAGGTGCCATTGAGGAGCGAGCCCGTGATTATAATGCAAATTGGATGTCTGCTGTAGAGATCCTCGACGACGATGTTTACATTGGAGCTGAAAATTTCGTCAACCTGTTCACTGTTCGTAAAAATAGTGAGGGTGCAACTGATGAGGAACGGGGCCGCCTTGAGGTGGTAGGTGAGTATCACCTAGGCGAGTTTGTCAATAGGTTCCGGCACGGCTCTCTTGTCATGCGGTTGCCGGACTCTGACGTGGGCCAGATTCCAACTGTCATCTTTGGCACCGTCAATGGTGTAATTGGAGTAATTGCCTCACTTCCTCAAGAACAATATGCATTTTTGGAGAAGCTCCAGTCAAACTTGAGGAAGGTGATAAAGGGTGTTGGAGGGTTGAACCATGAGCAGTGGAGATCATTCAGCAACGAGAAGAAAACTGTAGACGCGAAAAATTTCTTGGATGGCGATCTGATAGAATCGTTCCTTGATCTCAACCGTAGCAAGATGGACGAGATCTCAAAACAAATGCGCGTTTCAGTGGAGGAGCTCTGCAAGAGAGTAGAAGAAATGACAAGGCTGCATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000151 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003684 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006281 GO:0006289 GO:0006508 GO:0006511 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0010498 GO:0019538 GO:0019941 GO:0022414 GO:0030163 GO:0031461 GO:0032501 GO:0032502 GO:0032991 GO:0033554 GO:0034641 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051603 GO:0051716 GO:0061458 GO:0071704 GO:0080008 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko03420 ko04120 ko05161 ko05203 map03420 map04120 map05161 map05203

Pfam Domains

Protein Families

CPSF_A MMS1_N

Protein Analysis

1069

Amino Acids

119.38

Weight (kDa)

5.2

Isoelectric Point (pI)

35.17

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009295)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G05420 AT4G05420 AT4G21100
fragaria_vesca	FvH4_3g09700 FvH4_3g09700
malus_domestica	MD00G1109600.v1.1 MD05G1276000.v1.1
prunus_persica	Prupe.4G088300_v2.0.a1 Prupe.4G088300_v2.0.a1
pyrus_communis	pycom05g25700 pycom10g21110
rosa_chinensis	RchiOBHm_Chr5g0015371
rosa_laevigata	RLG00000032196
rosa_multiflora	Rmu_sc0017755.1_g000009 Rmu_ssc0000085.1_g000001
rosa_roxburghii	Rroxscaffold_1G00061090
rosa_rugosa	Rorug05G0026900
rosa_samantha	Rh5AG120500 Rh5BG119300 Rh5CG129900 Rh5DG118500
rosa_wichuraiana	Rw5G010420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	782, 2664
AasI	GACNNNNNNGTC	1 cut(s)	2091
AccB1I	GGYRCC	3 cut(s)	1746, 2636, 2906
AccB7I	CCANNNNNTGG	2 cut(s)	176, 617
AccI	GTMKAC	1 cut(s)	3063
AccII	CGCG	3 cut(s)	115, 3068, 3153
AciI	CCGC	8 cut(s)	75, 608, 655, 1645, 2344, 2491, 2788, 2860
AclI	AACGTT	1 cut(s)	570
AclWI	GGATC	4 cut(s)	895, 1149, 1163, 2686
AcoI	YGGCCR	1 cut(s)	2536
AcsI	RAATTY	4 cut(s)	123, 257, 2725, 3073
AcuI	CTGAAG	2 cut(s)	254, 548
AdeI	CACNNNGTG	1 cut(s)	617
AfaI	GTAC	8 cut(s)	112, 254, 1323, 1344, 1837, 1855, 2503, 2621
AfiI	CCNNNNNNNGG	9 cut(s)	176, 617, 1033, 1710, 2185, 2339, 2350, 2794, 2797
AgeI	ACCGGT	1 cut(s)	598
AhlI	ACTAGT	1 cut(s)	1348
AjiI	CACGTC	1 cut(s)	2878
AjnI	CCWGG	5 cut(s)	734, 1185, 1364, 1434, 2108
AjuI	GAANNNNNNNTTGG	6 cut(s)	676, 708, 2004, 2036, 3062, 3094
Alw21I	GWGCWC	5 cut(s)	90, 297, 825, 1374, 3171
Alw26I	GTCTC	4 cut(s)	325, 827, 1202, 1810
AlwI	GGATC	4 cut(s)	895, 1149, 1163, 2686
AoxI	GGCC	8 cut(s)	206, 983, 1024, 1883, 2341, 2536, 2785, 2881
ApoI	RAATTY	4 cut(s)	123, 257, 2725, 3073
ArsI	GACNNNNNNTTYG	6 cut(s)	1201, 1233, 2183, 2215, 2663, 2695
AseI	ATTAAT	2 cut(s)	1410, 2457
AsiGI	ACCGGT	1 cut(s)	598
Asp700I	GAANNNNTTC	2 cut(s)	2429, 3074
AspA2I	CCTAGG	2 cut(s)	2068, 2815
AspLEI	GCGC	1 cut(s)	3153
AspS9I	GGNCC	5 cut(s)	551, 983, 2341, 2785, 2881
AsuC2I	CCSGG	2 cut(s)	760, 2318
AvaII	GGWCC	1 cut(s)	551
AvrII	CCTAGG	2 cut(s)	2068, 2815
AxyI	CCTNAGG	1 cut(s)	81
BaeGI	GKGCMC	4 cut(s)	562, 1735, 1749, 1961
BalI	TGGCCA	1 cut(s)	2538
BanI	GGYRCC	3 cut(s)	1746, 2636, 2906
BanII	GRGCYC	6 cut(s)	90, 297, 825, 1374, 2656, 3171
BauI	CACGAG	2 cut(s)	2505, 2565
BbsI	GAAGAC	1 cut(s)	2163
Bbv12I	GWGCWC	5 cut(s)	90, 297, 825, 1374, 3171
BccI	CCATC	9 cut(s)	704, 722, 1058, 1481, 1736, 2363, 2492, 3077, 3121
BceAI	ACGGC	4 cut(s)	42, 422, 1289, 2860
BcgI	CGANNNNNNTGC	2 cut(s)	1386, 1420
BciT130I	CCWGG	5 cut(s)	736, 1187, 1366, 1436, 2110
BclI	TGATCA	1 cut(s)	751
BcnI	CCSGG	2 cut(s)	760, 2318
BcoDI	GTCTC	4 cut(s)	325, 827, 1202, 1810
BcuI	ACTAGT	1 cut(s)	1348
BfaI	CTAG	4 cut(s)	1349, 2069, 2148, 2816
BfmI	CTRYAG	8 cut(s)	149, 342, 926, 1573, 1897, 2378, 2685, 3060
BglII	AGATCT	1 cut(s)	3135
BlnI	CCTAGG	2 cut(s)	2068, 2815
BmcAI	AGTACT	1 cut(s)	1855
Bme1390I	CCNGG	7 cut(s)	736, 760, 1187, 1366, 1436, 2110, 2318
Bme18I	GGWCC	1 cut(s)	551
BmgBI	CACGTC	1 cut(s)	2878
BmgT120I	GGNCC	5 cut(s)	551, 983, 2341, 2785, 2881
BmiI	GGNNCC	8 cut(s)	603, 733, 984, 1748, 2638, 2786, 2837, 2908
BmrFI	CCNGG	7 cut(s)	736, 760, 1187, 1366, 1436, 2110, 2318
BmsI	GCATC	9 cut(s)	268, 296, 712, 854, 925, 1121, 1291, 1656, 1883
BoxI	GACNNNNGTC	1 cut(s)	351
BpiI	GAAGAC	1 cut(s)	2163
BpmI	CTGGAG	3 cut(s)	1071, 1377, 2960
Bpu10I	CCTNAGC	2 cut(s)	1640, 2001
BpuEI	CTTGAG	9 cut(s)	371, 431, 1034, 1253, 1260, 1358, 2813, 2931, 3007
BpuMI	CCSGG	2 cut(s)	760, 2318
BsaBI	GATNNNNATC	1 cut(s)	3087
BsaWI	WCCGGW	1 cut(s)	598
Bsc4I	CCNNNNNNNGG	9 cut(s)	176, 617, 1033, 1710, 2185, 2339, 2350, 2794, 2797
Bse118I	RCCGGY	1 cut(s)	598
Bse1I	ACTGG	7 cut(s)	811, 1323, 1456, 1783, 2143, 2229, 2977
Bse21I	CCTNAGG	1 cut(s)	81
Bse3DI	GCAATG	2 cut(s)	315, 1230
Bse8I	GATNNNNATC	1 cut(s)	3087
BseBI	CCWGG	5 cut(s)	736, 1187, 1366, 1436, 2110
BseJI	GATNNNNATC	1 cut(s)	3087
BseLI	CCNNNNNNNGG	9 cut(s)	176, 617, 1033, 1710, 2185, 2339, 2350, 2794, 2797
BseMI	GCAATG	2 cut(s)	315, 1230
BseMII	CTCAG	8 cut(s)	95, 282, 336, 1245, 1631, 2175, 2283, 2382
BseNI	ACTGG	7 cut(s)	811, 1323, 1456, 1783, 2143, 2229, 2977
BseRI	GAGGAG	3 cut(s)	129, 2660, 3179
BseSI	GKGCMC	4 cut(s)	562, 1735, 1749, 1961
BsgI	GTGCAG	1 cut(s)	2172
Bsh1236I	CGCG	3 cut(s)	115, 3068, 3153
Bsh1285I	CGRYCG	1 cut(s)	990
BshFI	GGCC	8 cut(s)	208, 985, 1026, 1885, 2343, 2538, 2787, 2883
BshNI	GGYRCC	3 cut(s)	1746, 2636, 2906
BshTI	ACCGGT	1 cut(s)	598
BsiEI	CGRYCG	1 cut(s)	990
BsiHKAI	GWGCWC	5 cut(s)	90, 297, 825, 1374, 3171
BsiSI	CCGG	6 cut(s)	205, 599, 759, 2318, 2839, 2867
BslFI	GGGAC	5 cut(s)	159, 1828, 2314, 2507, 2603
BslI	CCNNNNNNNGG	9 cut(s)	176, 617, 1033, 1710, 2185, 2339, 2350, 2794, 2797
BsmAI	GTCTC	4 cut(s)	325, 827, 1202, 1810
BsmFI	GGGAC	5 cut(s)	159, 1828, 2314, 2507, 2603
BsmI	GAATGC	3 cut(s)	1393, 2346, 2431
BsnI	GGCC	8 cut(s)	208, 985, 1026, 1885, 2343, 2538, 2787, 2883
Bsp1407I	TGTACA	1 cut(s)	2619
Bsp19I	CCATGG	1 cut(s)	2533
BspACI	CCGC	8 cut(s)	75, 608, 655, 1645, 2344, 2491, 2788, 2860
BspANI	GGCC	8 cut(s)	208, 985, 1026, 1885, 2343, 2538, 2787, 2883
BspCNI	CTCAG	8 cut(s)	94, 283, 335, 1246, 1632, 2174, 2282, 2383
BspFNI	CGCG	3 cut(s)	115, 3068, 3153
BspLI	GGNNCC	8 cut(s)	603, 733, 984, 1748, 2638, 2786, 2837, 2908
BspMAI	CTGCAG	2 cut(s)	153, 2382
BspPI	GGATC	4 cut(s)	895, 1149, 1163, 2686
BspT107I	GGYRCC	3 cut(s)	1746, 2636, 2906
BsrDI	GCAATG	2 cut(s)	315, 1230
BsrFI	RCCGGY	1 cut(s)	598
BsrGI	TGTACA	1 cut(s)	2619
BsrI	ACTGG	7 cut(s)	811, 1323, 1456, 1783, 2143, 2229, 2977
BssAI	RCCGGY	1 cut(s)	598
BssSI	CACGAG	2 cut(s)	2505, 2565
BssT1I	CCWWGG	8 cut(s)	554, 1027, 1735, 2068, 2337, 2403, 2533, 2815
Bst2BI	CACGAG	2 cut(s)	2505, 2565
Bst2UI	CCWGG	5 cut(s)	736, 1187, 1366, 1436, 2110
Bst6I	CTCTTC	1 cut(s)	1077
BstAUI	TGTACA	1 cut(s)	2619
BstC8I	GCNNGC	5 cut(s)	1399, 1580, 1584, 2245, 2652
BstDSI	CCRYGG	1 cut(s)	2533
BstFNI	CGCG	3 cut(s)	115, 3068, 3153
BstHHI	GCGC	1 cut(s)	3153
BstMAI	GTCTC	4 cut(s)	325, 827, 1202, 1810
BstMCI	CGRYCG	1 cut(s)	990
BstMWI	GCNNNNNNNGC	2 cut(s)	916, 1956
BstNI	CCWGG	5 cut(s)	736, 1187, 1366, 1436, 2110
BstNSI	RCATGY	2 cut(s)	1865, 2081
BstPAI	GACNNNNGTC	1 cut(s)	351
BstSCI	CCNGG	7 cut(s)	734, 758, 1185, 1364, 1434, 2108, 2316
BstSFI	CTRYAG	8 cut(s)	149, 342, 926, 1573, 1897, 2378, 2685, 3060
BstSLI	GKGCMC	4 cut(s)	562, 1735, 1749, 1961
BstUI	CGCG	3 cut(s)	115, 3068, 3153
BstV2I	GAAGAC	1 cut(s)	2163
BstX2I	RGATCY	3 cut(s)	1154, 2691, 3135
BstXI	CCANNNNNNTGG	1 cut(s)	2567
BstYI	RGATCY	3 cut(s)	1154, 2691, 3135
Bsu36I	CCTNAGG	1 cut(s)	81
BsuRI	GGCC	8 cut(s)	208, 985, 1026, 1885, 2343, 2538, 2787, 2883
BtgI	CCRYGG	1 cut(s)	2533
BtrI	CACGTC	1 cut(s)	2878
BtsI	GCAGTG	3 cut(s)	99, 1419, 3035
BtsIMutI	CAGTG	9 cut(s)	99, 278, 1161, 1210, 1419, 1776, 2742, 3035, 3165
Cac8I	GCNNGC	5 cut(s)	1399, 1580, 1584, 2245, 2652
CfoI	GCGC	1 cut(s)	3153
Cfr10I	RCCGGY	1 cut(s)	598
Cfr13I	GGNCC	5 cut(s)	551, 983, 2341, 2785, 2881
CseI	GACGC	4 cut(s)	49, 199, 1825, 3074
Csp6I	GTAC	8 cut(s)	111, 253, 1322, 1343, 1836, 1854, 2502, 2620
CspAI	ACCGGT	1 cut(s)	598
CviQI	GTAC	8 cut(s)	111, 253, 1322, 1343, 1836, 1854, 2502, 2620
DraI	TTTAAA	1 cut(s)	673
DraIII	CACNNNGTG	1 cut(s)	617
DrdI	GACNNNNNNGTC	1 cut(s)	2091
DseDI	GACNNNNNNGTC	1 cut(s)	2091
EaeI	YGGCCR	1 cut(s)	2536
Eam1104I	CTCTTC	1 cut(s)	1077
EarI	CTCTTC	1 cut(s)	1077
EciI	GGCGGA	1 cut(s)	597
Ecl136II	GAGCTC	5 cut(s)	88, 295, 823, 1372, 3169
Eco130I	CCWWGG	8 cut(s)	554, 1027, 1735, 2068, 2337, 2403, 2533, 2815
Eco24I	GRGCYC	6 cut(s)	90, 297, 825, 1374, 2656, 3171
Eco32I	GATATC	3 cut(s)	433, 1533, 1716
Eco47I	GGWCC	1 cut(s)	551
Eco53kI	GAGCTC	5 cut(s)	88, 295, 823, 1372, 3169
Eco57I	CTGAAG	2 cut(s)	254, 548
Eco81I	CCTNAGG	1 cut(s)	81
EcoICRI	GAGCTC	5 cut(s)	88, 295, 823, 1372, 3169
EcoO109I	RGGNCCY	1 cut(s)	551
EcoRII	CCWGG	5 cut(s)	734, 1185, 1364, 1434, 2108
EcoRV	GATATC	3 cut(s)	433, 1533, 1716
EcoT14I	CCWWGG	8 cut(s)	554, 1027, 1735, 2068, 2337, 2403, 2533, 2815
EcoT22I	ATGCAT	2 cut(s)	874, 2962
EcoT38I	GRGCYC	6 cut(s)	90, 297, 825, 1374, 2656, 3171
ErhI	CCWWGG	8 cut(s)	554, 1027, 1735, 2068, 2337, 2403, 2533, 2815
FalI	AAGNNNNNCTT	4 cut(s)	1794, 1826, 1998, 2030
FaqI	GGGAC	5 cut(s)	159, 1828, 2314, 2507, 2603
FauI	CCCGC	1 cut(s)	2484
FauNDI	CATATG	4 cut(s)	514, 949, 1953, 2308
FbaI	TGATCA	1 cut(s)	751
FblI	GTMKAC	1 cut(s)	3063
FriOI	GRGCYC	6 cut(s)	90, 297, 825, 1374, 2656, 3171
FspBI	CTAG	4 cut(s)	1349, 2069, 2148, 2816
GlaI	GCGC	1 cut(s)	3152
GsuI	CTGGAG	3 cut(s)	1071, 1377, 2960
HaeIII	GGCC	8 cut(s)	208, 985, 1026, 1885, 2343, 2538, 2787, 2883
HapII	CCGG	6 cut(s)	205, 599, 759, 2318, 2839, 2867
HgaI	GACGC	4 cut(s)	49, 199, 1825, 3074
HhaI	GCGC	1 cut(s)	3153
Hin6I	GCGC	1 cut(s)	3151
HinP1I	GCGC	1 cut(s)	3151
HincII	GTYRAC	3 cut(s)	994, 1788, 2734
HindII	GTYRAC	3 cut(s)	994, 1788, 2734
HindIII	AAGCTT	2 cut(s)	1195, 2045
HinfI	GANTC	9 cut(s)	902, 1098, 1228, 2159, 2485, 2563, 2870, 2887, 3098
HpaII	CCGG	6 cut(s)	205, 599, 759, 2318, 2839, 2867
Hpy99I	CGWCG	6 cut(s)	23, 65, 193, 2088, 2702, 2705
HpyCH4IV	ACGT	6 cut(s)	18, 45, 570, 1929, 2086, 2877
HpyF10VI	GCNNNNNNNGC	2 cut(s)	916, 1956
HpySE526I	ACGT	6 cut(s)	18, 45, 570, 1929, 2086, 2877
HspAI	GCGC	1 cut(s)	3151
Ksp22I	TGATCA	1 cut(s)	751
LmnI	GCTCC	9 cut(s)	85, 1052, 1369, 1396, 2101, 2647, 2717, 2979, 3166
LweI	GCATC	9 cut(s)	268, 296, 712, 854, 925, 1121, 1291, 1656, 1883
MaeI	CTAG	4 cut(s)	1349, 2069, 2148, 2816
MaeII	ACGT	6 cut(s)	18, 45, 570, 1929, 2086, 2877
MaeIII	GTNAC	6 cut(s)	22, 46, 802, 1039, 1327, 2442
MfeI	CAATTG	4 cut(s)	465, 840, 1995, 2028
MflI	RGATCY	3 cut(s)	1154, 2691, 3135
MlsI	TGGCCA	1 cut(s)	2538
MluNI	TGGCCA	1 cut(s)	2538
MlyI	GAGTC	4 cut(s)	2153, 2479, 2557, 2864
MmeI	TCCRAC	5 cut(s)	1224, 1573, 2166, 2915, 2989
Mox20I	TGGCCA	1 cut(s)	2538
Mph1103I	ATGCAT	2 cut(s)	874, 2962
MroXI	GAANNNNTTC	2 cut(s)	2429, 3074
MscI	TGGCCA	1 cut(s)	2538
MseI	TTAA	9 cut(s)	399, 593, 672, 1151, 1410, 1754, 2457, 2594, 2615
Msp20I	TGGCCA	1 cut(s)	2538
MspA1I	CMGCKG	2 cut(s)	1582, 1589
MspI	CCGG	6 cut(s)	205, 599, 759, 2318, 2839, 2867
MspR9I	CCNGG	7 cut(s)	736, 760, 1187, 1366, 1436, 2110, 2318
MunI	CAATTG	4 cut(s)	465, 840, 1995, 2028
Mva1269I	GAATGC	3 cut(s)	1393, 2346, 2431
MvaI	CCWGG	5 cut(s)	736, 1187, 1366, 1436, 2110
MvnI	CGCG	3 cut(s)	115, 3068, 3153
MwoI	GCNNNNNNNGC	2 cut(s)	916, 1956
NciI	CCSGG	2 cut(s)	760, 2318
NcoI	CCATGG	1 cut(s)	2533
NdeI	CATATG	4 cut(s)	514, 949, 1953, 2308
NlaIV	GGNNCC	8 cut(s)	603, 733, 984, 1748, 2638, 2786, 2837, 2908
NmuCI	GTSAC	4 cut(s)	46, 802, 1039, 1327
NsiI	ATGCAT	2 cut(s)	874, 2962
NspI	RCATGY	2 cut(s)	1865, 2081
PcsI	WCGNNNNNNNCGW	2 cut(s)	334, 2426
PctI	GAATGC	3 cut(s)	1393, 2346, 2431
PdmI	GAANNNNTTC	2 cut(s)	2429, 3074
PfeI	GAWTC	5 cut(s)	902, 1098, 1228, 2887, 3098
PflMI	CCANNNNNTGG	2 cut(s)	176, 617
PfoI	TCCNGGA	2 cut(s)	2108, 2316
PinAI	ACCGGT	1 cut(s)	598
Ple19I	CGATCG	1 cut(s)	990
PleI	GAGTC	4 cut(s)	2153, 2479, 2557, 2864
PpsI	GAGTC	4 cut(s)	2153, 2479, 2557, 2864
PpuMI	RGGWCCY	1 cut(s)	551
PshAI	GACNNNNGTC	1 cut(s)	351
PshBI	ATTAAT	2 cut(s)	1410, 2457
PsiI	TTATAA	2 cut(s)	782, 2664
Psp124BI	GAGCTC	5 cut(s)	90, 297, 825, 1374, 3171
Psp1406I	AACGTT	1 cut(s)	570
Psp5II	RGGWCCY	1 cut(s)	551
Psp6I	CCWGG	5 cut(s)	734, 1185, 1364, 1434, 2108
PspGI	CCWGG	5 cut(s)	734, 1185, 1364, 1434, 2108
PspN4I	GGNNCC	8 cut(s)	603, 733, 984, 1748, 2638, 2786, 2837, 2908
PspPI	GGNCC	5 cut(s)	551, 983, 2341, 2785, 2881
PspPPI	RGGWCCY	1 cut(s)	551
PstI	CTGCAG	2 cut(s)	153, 2382
PsuI	RGATCY	3 cut(s)	1154, 2691, 3135
PvuI	CGATCG	1 cut(s)	990
PvuII	CAGCTG	2 cut(s)	1582, 1589
RsaI	GTAC	8 cut(s)	112, 254, 1323, 1344, 1837, 1855, 2503, 2621
RsaNI	GTAC	8 cut(s)	111, 253, 1322, 1343, 1836, 1854, 2502, 2620
SacI	GAGCTC	5 cut(s)	90, 297, 825, 1374, 3171
SaqAI	TTAA	9 cut(s)	399, 593, 672, 1151, 1410, 1754, 2457, 2594, 2615
Sau96I	GGNCC	5 cut(s)	551, 983, 2341, 2785, 2881
ScaI	AGTACT	1 cut(s)	1855
SchI	GAGTC	4 cut(s)	2153, 2479, 2557, 2864
ScrFI	CCNGG	7 cut(s)	736, 760, 1187, 1366, 1436, 2110, 2318
SfaNI	GCATC	9 cut(s)	268, 296, 712, 854, 925, 1121, 1291, 1656, 1883
SfcI	CTRYAG	8 cut(s)	149, 342, 926, 1573, 1897, 2378, 2685, 3060
SinI	GGWCC	1 cut(s)	551
SmlI	CTYRAG	9 cut(s)	386, 410, 1013, 1232, 1275, 1373, 2792, 2946, 2986
SmoI	CTYRAG	9 cut(s)	386, 410, 1013, 1232, 1275, 1373, 2792, 2946, 2986
SpeI	ACTAGT	1 cut(s)	1348
SsiI	CCGC	8 cut(s)	75, 608, 655, 1645, 2344, 2491, 2788, 2860
SspI	AATATT	1 cut(s)	646
SspMI	CTAG	4 cut(s)	1349, 2069, 2148, 2816
SstI	GAGCTC	5 cut(s)	90, 297, 825, 1374, 3171
StyD4I	CCNGG	7 cut(s)	734, 758, 1185, 1364, 1434, 2108, 2316
StyI	CCWWGG	8 cut(s)	554, 1027, 1735, 2068, 2337, 2403, 2533, 2815
TaiI	ACGT	6 cut(s)	21, 48, 573, 1932, 2089, 2880
TaqI	TCGA	4 cut(s)	546, 1008, 1406, 2697
TatI	WGTACW	2 cut(s)	1853, 2619
TauI	GCSGC	3 cut(s)	1647, 2346, 2790
TfiI	GAWTC	5 cut(s)	902, 1098, 1228, 2887, 3098
Tru1I	TTAA	9 cut(s)	399, 593, 672, 1151, 1410, 1754, 2457, 2594, 2615
Tru9I	TTAA	9 cut(s)	399, 593, 672, 1151, 1410, 1754, 2457, 2594, 2615
TscAI	CASTG	9 cut(s)	106, 278, 1168, 1210, 1426, 1783, 2749, 3035, 3165
TseFI	GTSAC	4 cut(s)	46, 802, 1039, 1327
Tsp45I	GTSAC	4 cut(s)	46, 802, 1039, 1327
TspDTI	ATGAA	9 cut(s)	846, 936, 1119, 1241, 2039, 2164, 2347, 2566, 2612
TspGWI	ACGGA	2 cut(s)	1805, 1823
TspRI	CASTG	9 cut(s)	106, 278, 1168, 1210, 1426, 1783, 2749, 3035, 3165
Van91I	CCANNNNNTGG	2 cut(s)	176, 617
VpaK11BI	GGWCC	1 cut(s)	551
VspI	ATTAAT	2 cut(s)	1410, 2457
XapI	RAATTY	4 cut(s)	123, 257, 2725, 3073
XceI	RCATGY	2 cut(s)	1865, 2081
XmaJI	CCTAGG	2 cut(s)	2068, 2815
XmiI	GTMKAC	1 cut(s)	3063
XmnI	GAANNNNTTC	2 cut(s)	2429, 3074
XspI	CTAG	4 cut(s)	1349, 2069, 2148, 2816
ZrmI	AGTACT	1 cut(s)	1855
Zsp2I	ATGCAT	2 cut(s)	874, 2962

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.