Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0017755.1

Orthogroup ID

OG0009295

Physical Location & Seq

Genomic Coordinates Reverse (-)

29104 .. 36299

Gene Structure 7196 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0017755.1_g000009.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2238 bp

atgagagtgctttcttatccattttgcttaattttgtggccaggaaatgcacacggattgaaattcttctacttactcctctggcctgtcttggatgtgccgatatatggacgaattgcaacccttcaactttttcggccacatggtgaagcccaggattttctgtttattgcaacagaaagatacaagttttgtgtccttcagtgggatgttgaaacgcaggagcttattaccaaggcaatgggtgatgtctcagatcgtataggtcgtcctacagacagcggtcagattggtataatagatccagattgcagattaattggacttcatttgtatgatggcttgtttaaggttattcctttcgacaataaagggcagctgaaggaagcatttaacattaggcttgaggaacttcaagttttagatatcaagtttctttatggttgttcaaaacccacaattgtagttctttaccaggataacaaggatgcccgccatgtcaaaacatatgaggttgctctgaaggataaagattttgtcgagggtccttggtcacagaacaaccttgacaatggggctgagttgttaataccagttcctccaccactatgcggtgttctaattattggagaggaaacaattgtttactgcagtgccaatgcatttaaagcaatacccataagaccgtccatcacaagagcctatggaagagtggatgcagatggttctaggtatctacttggtgatcatgctgggctacttcacctgcttgttataacccatgagaaagaaaaggtgactggactcaagattgagctcttgggtgaaacatcgattgcatctacaatctcttatcttgataatggattcgtctatattggatcaagctatggggactcacagcttgtaaagctgactataaatccagatgcaaaaggttcatatgtcgaagttttggaaaggtatgtcaacttggggccaatagttgacttctgtgtggttgatcttgagagacaaggccaaggccaagtggtaacttgctctggtgcttacaaagatggttctcttcgtgttgttcgaaatggaattggaatcaatgaacaggcatcagttgagcttcaaggtatcaagggaatgtggtcattaagatcgtccactgatgatccacatgacttcttcctggttgttagctttatcagtgagacacgtattttggcaatgaatatggaggatgagctggaagaaaccgagatacagggcttctcttctcaagtgcaaactttattttgccatgatgctgtcttcaatcaacttgtgcaggtcacttcaagctcggtaaggctagtcagttctacatctagggatctgaagaatgagtggcatgctcctgcaggctattcgattaatgtagcaacagctaatgccacccaggttttattggcaactggaggaaagcatttagtttatttagaaattggtgacggggtcttgatagagaagaagtatgtacagttggactttgagatctcatgccttgacataaaccccataggtgaaaatcctaattatagccagctagcagctgttgggatgtggacagatataagtgtgcaaatatactctcttcctgatctgaaccgcatcacaaaggagcatttgggaggagagatcatacctcgttctgttcttctctgtacttttgaagggatatcatcatctacatccagaaagccgtatgctttggaagaagcttgtacagttttggaaggggttttgattgatcaaaaagaagaatctactttaaccgatatgcccttaggcacggccatacataacatagaaatcacccttggaaagggtggacaattagctagagcagcaggtgctgtagcgaaactgattgcaaaagaggggaaatcggccacattaaaattaccttctggggagttccgtttgatatccaaaaactgctcagcaacagtcggacaagtggggaatgttggggtgaagcagaaaagtttgggtaaagccggagctaaatgttggctaggtaagcgtcctgtagtaagaggagtagttatgaaccctgtagaccatccccatgggggtggtgaagggagggccccaattggtagaaaaaaacccgcaaccccttgggtttatcctgcacttggaagaagaagtagaaaaaggaataaatatagtgataatttgattcttcgtcgccgtagtaaatag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000151 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003684 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0006139 GO:0006259 GO:0006281 GO:0006289 GO:0006508 GO:0006511 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0010498 GO:0019538 GO:0019941 GO:0022414 GO:0030163 GO:0031461 GO:0032501 GO:0032502 GO:0032991 GO:0033554 GO:0034641 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0050896 GO:0051603 GO:0051716 GO:0061458 GO:0071704 GO:0080008 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko03420 ko04120 ko05161 ko05203 map03420 map04120 map05161 map05203

Pfam Domains

Protein Families

CPSF_A MMS1_N

Protein Analysis

745

Amino Acids

82.08

Weight (kDa)

6.46

Isoelectric Point (pI)

34.37

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009295)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G05420 AT4G05420 AT4G21100
fragaria_vesca	FvH4_3g09700 FvH4_3g09700
malus_domestica	MD00G1109600.v1.1 MD05G1276000.v1.1
prunus_persica	Prupe.4G088300_v2.0.a1 Prupe.4G088300_v2.0.a1
pyrus_communis	pycom05g25700 pycom10g21110
rosa_chinensis	RchiOBHm_Chr5g0015371
rosa_laevigata	RLG00000032196
rosa_multiflora	Rmu_sc0017755.1_g000009 Rmu_ssc0000085.1_g000001
rosa_roxburghii	Rroxscaffold_1G00061090
rosa_rugosa	Rorug05G0026900
rosa_samantha	Rh5AG120500 Rh5BG119300 Rh5CG129900 Rh5DG118500
rosa_wichuraiana	Rw5G010420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	776
AarI	CACCTGC	2 cut(s)	774, 1871
Acc36I	ACCTGC	3 cut(s)	774, 1309, 1871
AccI	GTMKAC	1 cut(s)	2091
AciI	CCGC	5 cut(s)	282, 493, 612, 1639, 2145
AclWI	GGATC	4 cut(s)	296, 889, 1157, 1371
AcoI	YGGCCR	4 cut(s)	38, 137, 1824, 1920
AcsI	RAATTY	1 cut(s)	62
AcuI	CTGAAG	4 cut(s)	185, 401, 542, 1388
AdeI	CACNNNGTG	1 cut(s)	146
AfaI	GTAC	3 cut(s)	1509, 1696, 1756
AfiI	CCNNNNNNNGG	6 cut(s)	107, 205, 611, 1855, 2105, 2171
AflIII	ACRYGT	1 cut(s)	1205
AgsI	TTSAA	9 cut(s)	61, 128, 215, 416, 450, 1121, 1306, 1329, 1703
AjnI	CCWGG	5 cut(s)	40, 153, 474, 1179, 1428
AjuI	GAANNNNNNNTTGG	2 cut(s)	1833, 1865
Alw21I	GWGCWC	1 cut(s)	819
Alw26I	GTCTC	3 cut(s)	256, 1006, 1196
AlwI	GGATC	4 cut(s)	296, 889, 1157, 1371
AlwNI	CAGNNNCTG	1 cut(s)	1886
AoxI	GGCC	9 cut(s)	38, 83, 137, 977, 1018, 1024, 1824, 1920, 2121
ApaI	GGGCCC	1 cut(s)	2125
ApeKI	GCWGC	3 cut(s)	376, 1580, 1877
ApoI	RAATTY	1 cut(s)	62
ArsI	GACNNNNNNTTYG	2 cut(s)	1195, 1227
AseI	ATTAAT	2 cut(s)	317, 1404
Asp700I	GAANNNNTTC	1 cut(s)	65
AspS9I	GGNCC	4 cut(s)	545, 977, 2121, 2122
AsuII	TTCGAA	1 cut(s)	1078
AsuNHI	GCTAGC	1 cut(s)	1576
AvaII	GGWCC	1 cut(s)	545
AxyI	CCTNAGG	1 cut(s)	1816
BaeGI	GKGCMC	1 cut(s)	2125
BalI	TGGCCA	1 cut(s)	40
BanII	GRGCYC	2 cut(s)	819, 2125
BbsI	GAAGAC	1 cut(s)	1294
Bbv12I	GWGCWC	1 cut(s)	819
BbvI	GCAGC	3 cut(s)	388, 1592, 1889
BccI	CCATC	5 cut(s)	332, 698, 716, 1052, 2103
BceAI	ACGGC	3 cut(s)	1717, 1839, 2211
BcgI	CGANNNNNNTGC	2 cut(s)	1380, 1414
BciT130I	CCWGG	5 cut(s)	42, 155, 476, 1181, 1430
BclI	TGATCA	2 cut(s)	745, 1780
BcoDI	GTCTC	3 cut(s)	256, 1006, 1196
BfaI	CTAG	6 cut(s)	729, 1343, 1359, 1577, 1872, 2048
BfmI	CTRYAG	6 cut(s)	273, 649, 1389, 1887, 2061, 2088
BfuAI	ACCTGC	3 cut(s)	774, 1309, 1871
BglII	AGATCT	1 cut(s)	1524
BisI	GCNGC	3 cut(s)	377, 1581, 1878
BlpI	GCTNAGC	1 cut(s)	1972
BlsI	GCNGC	3 cut(s)	378, 1582, 1879
Bme1390I	CCNGG	5 cut(s)	42, 155, 476, 1181, 1430
Bme18I	GGWCC	1 cut(s)	545
BmgT120I	GGNCC	4 cut(s)	545, 977, 2121, 2122
BmiI	GGNNCC	4 cut(s)	546, 978, 2123, 2124
BmrFI	CCNGG	5 cut(s)	42, 155, 476, 1181, 1430
BmsI	GCATC	7 cut(s)	478, 706, 848, 919, 1115, 1285, 1650
BmtI	GCTAGC	1 cut(s)	1580
BoxI	GACNNNNGTC	1 cut(s)	282
BpiI	GAAGAC	1 cut(s)	1294
BpmI	CTGGAG	1 cut(s)	1467
Bpu1102I	GCTNAGC	1 cut(s)	1972
Bpu14I	TTCGAA	1 cut(s)	1078
BpuEI	CTTGAG	4 cut(s)	425, 791, 1028, 1254
Bsa29I	ATCGAT	1 cut(s)	833
BsaAI	YACGTR	1 cut(s)	1208
BsaJI	CCNNGG	8 cut(s)	153, 234, 548, 1021, 1428, 1849, 2101, 2153
Bsc4I	CCNNNNNNNGG	6 cut(s)	107, 205, 611, 1855, 2105, 2171
Bse1I	ACTGG	3 cut(s)	593, 805, 1450
Bse21I	CCTNAGG	1 cut(s)	1816
Bse3DI	GCAATG	2 cut(s)	246, 1224
BseBI	CCWGG	5 cut(s)	42, 155, 476, 1181, 1430
BseCI	ATCGAT	1 cut(s)	833
BseDI	CCNNGG	8 cut(s)	153, 234, 548, 1021, 1428, 1849, 2101, 2153
BseGI	GGATG	8 cut(s)	100, 214, 493, 721, 1237, 1596, 1721, 2095
BseLI	CCNNNNNNNGG	6 cut(s)	107, 205, 611, 1855, 2105, 2171
BseMI	GCAATG	2 cut(s)	246, 1224
BseMII	CTCAG	3 cut(s)	267, 570, 1986
BseNI	ACTGG	3 cut(s)	593, 805, 1450
BseRI	GAGGAG	3 cut(s)	68, 1677, 2085
BseSI	GKGCMC	1 cut(s)	2125
BseXI	GCAGC	3 cut(s)	388, 1592, 1889
BseYI	CCCAGC	1 cut(s)	752
BsgI	GTGCAG	2 cut(s)	1337, 2151
BshFI	GGCC	9 cut(s)	40, 85, 139, 979, 1020, 1026, 1826, 1922, 2123
BshVI	ATCGAT	1 cut(s)	833
BsiHKAI	GWGCWC	1 cut(s)	819
BsiSI	CCGG	1 cut(s)	2031
BslFI	GGGAC	1 cut(s)	908
BslI	CCNNNNNNNGG	6 cut(s)	107, 205, 611, 1855, 2105, 2171
BsmAI	GTCTC	3 cut(s)	256, 1006, 1196
BsmFI	GGGAC	1 cut(s)	908
BsnI	GGCC	9 cut(s)	40, 85, 139, 979, 1020, 1026, 1826, 1922, 2123
Bsp119I	TTCGAA	1 cut(s)	1078
Bsp120I	GGGCCC	1 cut(s)	2121
Bsp1286I	GDGCHC	2 cut(s)	819, 2125
Bsp1407I	TGTACA	2 cut(s)	1507, 1754
Bsp1720I	GCTNAGC	1 cut(s)	1972
Bsp19I	CCATGG	1 cut(s)	2101
BspACI	CCGC	5 cut(s)	282, 493, 612, 1639, 2145
BspANI	GGCC	9 cut(s)	40, 85, 139, 979, 1020, 1026, 1826, 1922, 2123
BspCNI	CTCAG	3 cut(s)	266, 571, 1985
BspDI	ATCGAT	1 cut(s)	833
BspLI	GGNNCC	4 cut(s)	546, 978, 2123, 2124
BspMAI	CTGCAG	2 cut(s)	653, 1393
BspMI	ACCTGC	3 cut(s)	774, 1309, 1871
BspOI	GCTAGC	1 cut(s)	1580
BspPI	GGATC	4 cut(s)	296, 889, 1157, 1371
BspT104I	TTCGAA	1 cut(s)	1078
BsrDI	GCAATG	2 cut(s)	246, 1224
BsrGI	TGTACA	2 cut(s)	1507, 1754
BsrI	ACTGG	3 cut(s)	593, 805, 1450
BssECI	CCNNGG	8 cut(s)	153, 234, 548, 1021, 1428, 1849, 2101, 2153
BssT1I	CCWWGG	6 cut(s)	234, 548, 1021, 1849, 2101, 2153
Bst2UI	CCWGG	5 cut(s)	42, 155, 476, 1181, 1430
Bst4CI	ACNGT	4 cut(s)	687, 1512, 1759, 1981
Bst6I	CTCTTC	4 cut(s)	703, 1071, 1270, 1629
BstAPI	GCANNNNNTGC	1 cut(s)	1883
BstAUI	TGTACA	2 cut(s)	1507, 1754
BstBAI	YACGTR	1 cut(s)	1208
BstBI	TTCGAA	1 cut(s)	1078
BstC8I	GCNNGC	5 cut(s)	493, 1383, 1393, 1574, 1578
BstDEI	CTNAG	4 cut(s)	253, 579, 1816, 1972
BstDSI	CCRYGG	1 cut(s)	2101
BstENI	CCTNNNNNAGG	1 cut(s)	1853
BstF5I	GGATG	8 cut(s)	100, 214, 493, 721, 1237, 1596, 1721, 2095
BstMAI	GTCTC	3 cut(s)	256, 1006, 1196
BstMWI	GCNNNNNNNGC	5 cut(s)	668, 910, 1877, 1883, 2053
BstNI	CCWGG	5 cut(s)	42, 155, 476, 1181, 1430
BstNSI	RCATGY	1 cut(s)	1385
BstPAI	GACNNNNGTC	1 cut(s)	282
BstSCI	CCNGG	5 cut(s)	40, 153, 474, 1179, 1428
BstSFI	CTRYAG	6 cut(s)	273, 649, 1389, 1887, 2061, 2088
BstSLI	GKGCMC	1 cut(s)	2125
BstV1I	GCAGC	3 cut(s)	388, 1592, 1889
BstV2I	GAAGAC	1 cut(s)	1294
BstX2I	RGATCY	3 cut(s)	301, 1363, 1524
BstXI	CCANNNNNNTGG	3 cut(s)	241, 2102, 2108
BstYI	RGATCY	3 cut(s)	301, 1363, 1524
Bsu15I	ATCGAT	1 cut(s)	833
Bsu36I	CCTNAGG	1 cut(s)	1816
BsuRI	GGCC	9 cut(s)	40, 85, 139, 979, 1020, 1026, 1826, 1922, 2123
BsuTUI	ATCGAT	1 cut(s)	833
BtgI	CCRYGG	1 cut(s)	2101
BtsCI	GGATG	8 cut(s)	100, 214, 493, 721, 1237, 1596, 1721, 2095
BtsI	GCAGTG	1 cut(s)	658
BtsIMutI	CAGTG	4 cut(s)	209, 658, 1155, 1204
BveI	ACCTGC	3 cut(s)	774, 1309, 1871
Cac8I	GCNNGC	5 cut(s)	493, 1383, 1393, 1574, 1578
CaiI	CAGNNNCTG	1 cut(s)	1886
Cfr13I	GGNCC	4 cut(s)	545, 977, 2121, 2122
ClaI	ATCGAT	1 cut(s)	833
CseI	GACGC	1 cut(s)	2045
Csp6I	GTAC	3 cut(s)	1508, 1695, 1755
CviAII	CATG	9 cut(s)	143, 497, 749, 782, 1169, 1292, 1382, 1530, 2102
CviQI	GTAC	3 cut(s)	1508, 1695, 1755
DdeI	CTNAG	4 cut(s)	253, 579, 1816, 1972
DraI	TTTAAA	1 cut(s)	667
DraIII	CACNNNGTG	1 cut(s)	146
EaeI	YGGCCR	4 cut(s)	38, 137, 1824, 1920
Eam1104I	CTCTTC	4 cut(s)	703, 1071, 1270, 1629
EarI	CTCTTC	4 cut(s)	703, 1071, 1270, 1629
Ecl136II	GAGCTC	1 cut(s)	817
Eco130I	CCWWGG	6 cut(s)	234, 548, 1021, 1849, 2101, 2153
Eco24I	GRGCYC	2 cut(s)	819, 2125
Eco32I	GATATC	3 cut(s)	427, 1710, 1959
Eco47I	GGWCC	1 cut(s)	545
Eco53kI	GAGCTC	1 cut(s)	817
Eco57I	CTGAAG	4 cut(s)	185, 401, 542, 1388
Eco81I	CCTNAGG	1 cut(s)	1816
EcoICRI	GAGCTC	1 cut(s)	817
EcoNI	CCTNNNNNAGG	1 cut(s)	1853
EcoO109I	RGGNCCY	3 cut(s)	545, 2121, 2122
EcoRII	CCWGG	5 cut(s)	40, 153, 474, 1179, 1428
EcoRV	GATATC	3 cut(s)	427, 1710, 1959
EcoT14I	CCWWGG	6 cut(s)	234, 548, 1021, 1849, 2101, 2153
EcoT22I	ATGCAT	1 cut(s)	664
EcoT38I	GRGCYC	2 cut(s)	819, 2125
ErhI	CCWWGG	6 cut(s)	234, 548, 1021, 1849, 2101, 2153
FaeI	CATG	9 cut(s)	146, 500, 752, 785, 1172, 1295, 1385, 1533, 2105
FaqI	GGGAC	1 cut(s)	908
FatI	CATG	9 cut(s)	142, 496, 748, 781, 1168, 1291, 1381, 1529, 2101
FauI	CCCGC	2 cut(s)	500, 2152
FauNDI	CATATG	2 cut(s)	508, 943
FbaI	TGATCA	2 cut(s)	745, 1780
FblI	GTMKAC	1 cut(s)	2091
Fnu4HI	GCNGC	3 cut(s)	377, 1581, 1878
FokI	GGATG	8 cut(s)	107, 221, 500, 728, 1244, 1603, 1708, 2082
FriOI	GRGCYC	2 cut(s)	819, 2125
Fsp4HI	GCNGC	3 cut(s)	377, 1581, 1878
FspBI	CTAG	6 cut(s)	729, 1343, 1359, 1577, 1872, 2048
GluI	GCNGC	3 cut(s)	377, 1581, 1878
GsaI	CCCAGC	1 cut(s)	756
GsuI	CTGGAG	1 cut(s)	1467
HaeIII	GGCC	9 cut(s)	40, 85, 139, 979, 1020, 1026, 1826, 1922, 2123
HapII	CCGG	1 cut(s)	2031
HgaI	GACGC	1 cut(s)	2045
Hin1II	CATG	9 cut(s)	146, 500, 752, 785, 1172, 1295, 1385, 1533, 2105
HincII	GTYRAC	2 cut(s)	970, 988
HindII	GTYRAC	2 cut(s)	970, 988
HindIII	AAGCTT	1 cut(s)	1749
HinfI	GANTC	6 cut(s)	804, 867, 896, 1092, 1793, 2215
HpaII	CCGG	1 cut(s)	2031
Hpy166II	GTNNAC	7 cut(s)	646, 970, 988, 1155, 1596, 1862, 2092
Hpy188I	TCNGA	6 cut(s)	256, 288, 522, 1368, 1635, 1985
Hpy188III	TCNNGA	8 cut(s)	305, 808, 857, 926, 1007, 1489, 1628, 1725
Hpy8I	GTNNAC	7 cut(s)	646, 970, 988, 1155, 1596, 1862, 2092
Hpy99I	CGWCG	1 cut(s)	2226
HpyAV	CCTTC	8 cut(s)	134, 209, 376, 517, 1697, 1760, 1947, 2108
HpyCH4III	ACNGT	4 cut(s)	687, 1512, 1759, 1981
HpyCH4IV	ACGT	1 cut(s)	1207
HpyF10VI	GCNNNNNNNGC	5 cut(s)	668, 910, 1877, 1883, 2053
HpyF3I	CTNAG	4 cut(s)	253, 579, 1816, 1972
HpySE526I	ACGT	1 cut(s)	1207
Hsp92II	CATG	9 cut(s)	146, 500, 752, 785, 1172, 1295, 1385, 1533, 2105
Ksp22I	TGATCA	2 cut(s)	745, 1780
LmnI	GCTCC	4 cut(s)	223, 1390, 1651, 2033
Lsp1109I	GCAGC	3 cut(s)	388, 1592, 1889
LweI	GCATC	7 cut(s)	478, 706, 848, 919, 1115, 1285, 1650
MaeI	CTAG	6 cut(s)	729, 1343, 1359, 1577, 1872, 2048
MaeII	ACGT	1 cut(s)	1207
MaeIII	GTNAC	5 cut(s)	552, 796, 1033, 1321, 1478
MfeI	CAATTG	3 cut(s)	459, 639, 2127
MflI	RGATCY	3 cut(s)	301, 1363, 1524
MhlI	GDGCHC	2 cut(s)	819, 2125
MlsI	TGGCCA	1 cut(s)	40
MluNI	TGGCCA	1 cut(s)	40
MlyI	GAGTC	2 cut(s)	798, 890
MmeI	TCCRAC	2 cut(s)	1494, 1963
Mox20I	TGGCCA	1 cut(s)	40
Mph1103I	ATGCAT	1 cut(s)	664
MroXI	GAANNNNTTC	1 cut(s)	65
MscI	TGGCCA	1 cut(s)	40
MslI	CAYNNNNRTG	4 cut(s)	333, 607, 2100, 2106
Msp20I	TGGCCA	1 cut(s)	40
MspA1I	CMGCKG	3 cut(s)	282, 379, 1583
MspI	CCGG	1 cut(s)	2031
MspR9I	CCNGG	5 cut(s)	42, 155, 476, 1181, 1430
MunI	CAATTG	3 cut(s)	459, 639, 2127
MvaI	CCWGG	5 cut(s)	42, 155, 476, 1181, 1430
MwoI	GCNNNNNNNGC	5 cut(s)	668, 910, 1877, 1883, 2053
NcoI	CCATGG	1 cut(s)	2101
NdeI	CATATG	2 cut(s)	508, 943
NheI	GCTAGC	1 cut(s)	1576
NlaIII	CATG	9 cut(s)	146, 500, 752, 785, 1172, 1295, 1385, 1533, 2105
NlaIV	GGNNCC	4 cut(s)	546, 978, 2123, 2124
NmuCI	GTSAC	4 cut(s)	552, 796, 1321, 1478
NsiI	ATGCAT	1 cut(s)	664
NspI	RCATGY	1 cut(s)	1385
NspV	TTCGAA	1 cut(s)	1078
PaeI	GCATGC	1 cut(s)	1385
PaqCI	CACCTGC	2 cut(s)	774, 1871
PcsI	WCGNNNNNNNCGW	2 cut(s)	265, 1075
PdmI	GAANNNNTTC	1 cut(s)	65
PfeI	GAWTC	4 cut(s)	867, 1092, 1793, 2215
PflFI	GACNNNGTC	1 cut(s)	1484
PkrI	GCNGC	3 cut(s)	378, 1582, 1879
PleI	GAGTC	2 cut(s)	798, 890
PpsI	GAGTC	2 cut(s)	798, 890
Ppu21I	YACGTR	1 cut(s)	1208
PpuMI	RGGWCCY	1 cut(s)	545
PshAI	GACNNNNGTC	1 cut(s)	282
PshBI	ATTAAT	2 cut(s)	317, 1404
PsiI	TTATAA	1 cut(s)	776
Psp124BI	GAGCTC	1 cut(s)	819
Psp5II	RGGWCCY	1 cut(s)	545
Psp6I	CCWGG	5 cut(s)	40, 153, 474, 1179, 1428
PspFI	CCCAGC	1 cut(s)	752
PspGI	CCWGG	5 cut(s)	40, 153, 474, 1179, 1428
PspN4I	GGNNCC	4 cut(s)	546, 978, 2123, 2124
PspOMI	GGGCCC	1 cut(s)	2121
PspPI	GGNCC	4 cut(s)	545, 977, 2121, 2122
PspPPI	RGGWCCY	1 cut(s)	545
PstI	CTGCAG	2 cut(s)	653, 1393
PstNI	CAGNNNCTG	1 cut(s)	1886
PsuI	RGATCY	3 cut(s)	301, 1363, 1524
PsyI	GACNNNGTC	1 cut(s)	1484
PvuII	CAGCTG	2 cut(s)	379, 1583
RsaI	GTAC	3 cut(s)	1509, 1696, 1756
RsaNI	GTAC	3 cut(s)	1508, 1695, 1755
RseI	CAYNNNNRTG	4 cut(s)	333, 607, 2100, 2106
SacI	GAGCTC	1 cut(s)	819
SatI	GCNGC	3 cut(s)	377, 1581, 1878
Sau96I	GGNCC	4 cut(s)	545, 977, 2121, 2122
SbfI	CCTGCAGG	1 cut(s)	1393
SchI	GAGTC	2 cut(s)	798, 890
ScrFI	CCNGG	5 cut(s)	42, 155, 476, 1181, 1430
SdaI	CCTGCAGG	1 cut(s)	1393
SduI	GDGCHC	2 cut(s)	819, 2125
SfaNI	GCATC	7 cut(s)	478, 706, 848, 919, 1115, 1285, 1650
SfcI	CTRYAG	6 cut(s)	273, 649, 1389, 1887, 2061, 2088
SfuI	TTCGAA	1 cut(s)	1078
SinI	GGWCC	1 cut(s)	545
SmiMI	CAYNNNNRTG	4 cut(s)	333, 607, 2100, 2106
SmlI	CTYRAG	4 cut(s)	404, 806, 1007, 1269
SmoI	CTYRAG	4 cut(s)	404, 806, 1007, 1269
SphI	GCATGC	1 cut(s)	1385
Sse8387I	CCTGCAGG	1 cut(s)	1393
SsiI	CCGC	5 cut(s)	282, 493, 612, 1639, 2145
SspMI	CTAG	6 cut(s)	729, 1343, 1359, 1577, 1872, 2048
SstI	GAGCTC	1 cut(s)	819
StyD4I	CCNGG	5 cut(s)	40, 153, 474, 1179, 1428
StyI	CCWWGG	6 cut(s)	234, 548, 1021, 1849, 2101, 2153
TaaI	ACNGT	4 cut(s)	687, 1512, 1759, 1981
TaiI	ACGT	1 cut(s)	1210
TaqI	TCGA	6 cut(s)	363, 540, 833, 948, 1078, 1400
TatI	WGTACW	3 cut(s)	1507, 1694, 1754
TfiI	GAWTC	4 cut(s)	867, 1092, 1793, 2215
TscAI	CASTG	4 cut(s)	209, 658, 1162, 1204
TseFI	GTSAC	4 cut(s)	552, 796, 1321, 1478
TseI	GCWGC	3 cut(s)	376, 1580, 1877
Tsp45I	GTSAC	4 cut(s)	552, 796, 1321, 1478
TspDTI	ATGAA	5 cut(s)	317, 930, 1113, 1235, 2096
TspGWI	ACGGA	2 cut(s)	69, 1940
TspRI	CASTG	4 cut(s)	209, 658, 1162, 1204
Tth111I	GACNNNGTC	1 cut(s)	1484
VpaK11BI	GGWCC	1 cut(s)	545
VspI	ATTAAT	2 cut(s)	317, 1404
XagI	CCTNNNNNAGG	1 cut(s)	1853
XapI	RAATTY	1 cut(s)	62
XceI	RCATGY	1 cut(s)	1385
XmiI	GTMKAC	1 cut(s)	2091
XmnI	GAANNNNTTC	1 cut(s)	65
XspI	CTAG	6 cut(s)	729, 1343, 1359, 1577, 1872, 2048
Zsp2I	ATGCAT	1 cut(s)	664

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.