DNA damage-binding protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G05420 AT4G05420 AT4G21100 |
| fragaria_vesca | FvH4_3g09700 FvH4_3g09700 |
| malus_domestica | MD00G1109600.v1.1 MD05G1276000.v1.1 |
| prunus_persica | Prupe.4G088300_v2.0.a1 Prupe.4G088300_v2.0.a1 |
| pyrus_communis | pycom05g25700 pycom10g21110 |
| rosa_chinensis | RchiOBHm_Chr5g0015371 |
| rosa_laevigata | RLG00000032196 |
| rosa_multiflora | Rmu_sc0017755.1_g000009 Rmu_ssc0000085.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00061090 |
| rosa_rugosa | Rorug05G0026900 |
| rosa_samantha | Rh5AG120500 Rh5BG119300 Rh5CG129900 Rh5DG118500 |
| rosa_wichuraiana | Rw5G010420 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 845 |
| Acc36I | ACCTGC | 1 cut(s) | 1378 |
| AccB1I | GGYRCC | 1 cut(s) | 1809 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 680 |
| AccII | CGCG | 3 cut(s) | 1140, 2571, 3216 |
| AciI | CCGC | 4 cut(s) | 1708, 2242, 2554, 2589 |
| AclWI | GGATC | 7 cut(s) | 333, 365, 958, 1212, 1226, 2749, 2944 |
| AcoI | YGGCCR | 2 cut(s) | 2599, 2848 |
| AcsI | RAATTY | 8 cut(s) | 123, 257, 1278, 1819, 1996, 2885, 3136, 3198 |
| AcuI | CTGAAG | 2 cut(s) | 1457, 2788 |
| AcvI | CACGTG | 1 cut(s) | 2720 |
| AdeI | CACNNNGTG | 1 cut(s) | 680 |
| AfaI | GTAC | 5 cut(s) | 112, 1840, 1900, 1918, 2566 |
| AfeI | AGCGCT | 1 cut(s) | 2613 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 176, 680, 1096, 1773, 2402, 2857 |
| AflIII | ACRYGT | 1 cut(s) | 113 |
| AhlI | ACTAGT | 1 cut(s) | 1411 |
| AjnI | CCWGG | 3 cut(s) | 1248, 1497, 2171 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 739, 771, 2067, 2099 |
| AleI | CACNNNNGTG | 1 cut(s) | 2880 |
| Alw21I | GWGCWC | 6 cut(s) | 90, 297, 888, 1403, 2719, 3234 |
| Alw26I | GTCTC | 4 cut(s) | 325, 890, 1265, 1873 |
| AlwI | GGATC | 7 cut(s) | 333, 365, 958, 1212, 1226, 2749, 2944 |
| Aor51HI | AGCGCT | 1 cut(s) | 2613 |
| AoxI | GGCC | 7 cut(s) | 27, 1046, 1087, 1946, 2599, 2848, 2944 |
| ApeKI | GCWGC | 9 cut(s) | 445, 1649, 1934, 1978, 2036, 2307, 2440, 2513, 3262 |
| ApoI | RAATTY | 8 cut(s) | 123, 257, 1278, 1819, 1996, 2885, 3136, 3198 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 1264, 1296, 2246, 2278, 2726, 2758 |
| AseI | ATTAAT | 1 cut(s) | 386 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 126, 2492 |
| AspA2I | CCTAGG | 1 cut(s) | 2878 |
| AspLEI | GCGC | 3 cut(s) | 2614, 2925, 3216 |
| AspS9I | GGNCC | 6 cut(s) | 28, 77, 614, 1046, 2175, 2944 |
| AsuC2I | CCSGG | 1 cut(s) | 823 |
| AsuII | TTCGAA | 1 cut(s) | 1147 |
| AsuNHI | GCTAGC | 1 cut(s) | 1645 |
| AvaII | GGWCC | 3 cut(s) | 77, 614, 2175 |
| AvrII | CCTAGG | 1 cut(s) | 2878 |
| AxyI | CCTNAGG | 2 cut(s) | 81, 2131 |
| BaeGI | GKGCMC | 4 cut(s) | 625, 1798, 1812, 2024 |
| BanI | GGYRCC | 1 cut(s) | 1809 |
| BanII | GRGCYC | 5 cut(s) | 90, 297, 888, 1403, 3234 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1967, 1999 |
| BauI | CACGAG | 4 cut(s) | 763, 1834, 2628, 2690 |
| BbrPI | CACGTG | 1 cut(s) | 2720 |
| BbsI | GAAGAC | 1 cut(s) | 1363 |
| Bbv12I | GWGCWC | 6 cut(s) | 90, 297, 888, 1403, 2719, 3234 |
| BbvI | GCAGC | 9 cut(s) | 457, 1661, 1921, 1965, 2023, 2294, 2427, 2500, 3249 |
| BceAI | ACGGC | 8 cut(s) | 42, 1637, 2133, 2382, 2614, 2835, 3163, 3165 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1433, 1449, 1467, 1483 |
| BciT130I | CCWGG | 3 cut(s) | 1250, 1499, 2173 |
| BclI | TGATCA | 1 cut(s) | 814 |
| BcnI | CCSGG | 1 cut(s) | 823 |
| BcoDI | GTCTC | 4 cut(s) | 325, 890, 1265, 1873 |
| BcuI | ACTAGT | 1 cut(s) | 1411 |
| BfaI | CTAG | 9 cut(s) | 798, 1412, 1428, 1646, 2190, 2211, 2414, 2609, 2879 |
| BfmI | CTRYAG | 4 cut(s) | 342, 989, 2748, 3123 |
| BfoI | RGCGCY | 1 cut(s) | 2615 |
| BfuAI | ACCTGC | 1 cut(s) | 1378 |
| BglII | AGATCT | 1 cut(s) | 1593 |
| BlnI | CCTAGG | 1 cut(s) | 2878 |
| BmcAI | AGTACT | 2 cut(s) | 1840, 1918 |
| Bme1390I | CCNGG | 4 cut(s) | 823, 1250, 1499, 2173 |
| Bme18I | GGWCC | 3 cut(s) | 77, 614, 2175 |
| BmgT120I | GGNCC | 6 cut(s) | 28, 77, 614, 1046, 2175, 2944 |
| BmiI | GGNNCC | 3 cut(s) | 615, 1047, 1811 |
| BmrFI | CCNGG | 4 cut(s) | 823, 1250, 1499, 2173 |
| BmtI | GCTAGC | 1 cut(s) | 1649 |
| BoxI | GACNNNNGTC | 1 cut(s) | 351 |
| BpiI | GAAGAC | 1 cut(s) | 1363 |
| BpmI | CTGGAG | 3 cut(s) | 1134, 1440, 3023 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1703 |
| Bpu14I | TTCGAA | 1 cut(s) | 1147 |
| BpuEI | CTTGAG | 7 cut(s) | 434, 494, 1097, 1316, 1323, 2876, 3070 |
| BpuMI | CCSGG | 1 cut(s) | 823 |
| BsaAI | YACGTR | 2 cut(s) | 116, 2720 |
| BsaJI | CCNNGG | 8 cut(s) | 617, 1090, 1497, 1716, 1798, 2466, 2776, 2878 |
| BsaWI | WCCGGW | 2 cut(s) | 74, 1514 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 176, 680, 1096, 1773, 2402, 2857 |
| Bse1I | ACTGG | 6 cut(s) | 499, 662, 874, 1846, 2206, 3040 |
| Bse21I | CCTNAGG | 2 cut(s) | 81, 2131 |
| Bse3DI | GCAATG | 4 cut(s) | 315, 903, 1293, 2994 |
| BseBI | CCWGG | 3 cut(s) | 1250, 1499, 2173 |
| BseDI | CCNNGG | 8 cut(s) | 617, 1090, 1497, 1716, 1798, 2466, 2776, 2878 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 176, 680, 1096, 1773, 2402, 2857 |
| BseMI | GCAATG | 4 cut(s) | 315, 903, 1293, 2994 |
| BseMII | CTCAG | 6 cut(s) | 95, 282, 1308, 1694, 2445, 3190 |
| BseNI | ACTGG | 6 cut(s) | 499, 662, 874, 1846, 2206, 3040 |
| BseRI | GAGGAG | 4 cut(s) | 129, 1746, 2723, 3242 |
| BseSI | GKGCMC | 4 cut(s) | 625, 1798, 1812, 2024 |
| BseXI | GCAGC | 9 cut(s) | 457, 1661, 1921, 1965, 2023, 2294, 2427, 2500, 3249 |
| BsgI | GTGCAG | 3 cut(s) | 1364, 1406, 2235 |
| Bsh1236I | CGCG | 3 cut(s) | 1140, 2571, 3216 |
| BshFI | GGCC | 7 cut(s) | 29, 1048, 1089, 1948, 2601, 2850, 2946 |
| BshNI | GGYRCC | 1 cut(s) | 1809 |
| BsiHKAI | GWGCWC | 6 cut(s) | 90, 297, 888, 1403, 2719, 3234 |
| BsiSI | CCGG | 4 cut(s) | 75, 822, 995, 1515 |
| BslFI | GGGAC | 2 cut(s) | 1891, 2377 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 176, 680, 1096, 1773, 2402, 2857 |
| BsmAI | GTCTC | 4 cut(s) | 325, 890, 1265, 1873 |
| BsmFI | GGGAC | 2 cut(s) | 1891, 2377 |
| BsmI | GAATGC | 4 cut(s) | 2409, 2492, 2494, 2591 |
| BsnI | GGCC | 7 cut(s) | 29, 1048, 1089, 1948, 2601, 2850, 2946 |
| Bsp119I | TTCGAA | 1 cut(s) | 1147 |
| Bsp1407I | TGTACA | 1 cut(s) | 110 |
| Bsp68I | TCGCGA | 1 cut(s) | 2571 |
| BspACI | CCGC | 4 cut(s) | 1708, 2242, 2554, 2589 |
| BspANI | GGCC | 7 cut(s) | 29, 1048, 1089, 1948, 2601, 2850, 2946 |
| BspCNI | CTCAG | 6 cut(s) | 94, 283, 1309, 1695, 2446, 3189 |
| BspFNI | CGCG | 3 cut(s) | 1140, 2571, 3216 |
| BspLI | GGNNCC | 3 cut(s) | 615, 1047, 1811 |
| BspMI | ACCTGC | 1 cut(s) | 1378 |
| BspOI | GCTAGC | 1 cut(s) | 1649 |
| BspPI | GGATC | 7 cut(s) | 333, 365, 958, 1212, 1226, 2749, 2944 |
| BspT104I | TTCGAA | 1 cut(s) | 1147 |
| BspT107I | GGYRCC | 1 cut(s) | 1809 |
| BsrDI | GCAATG | 4 cut(s) | 315, 903, 1293, 2994 |
| BsrGI | TGTACA | 1 cut(s) | 110 |
| BsrI | ACTGG | 6 cut(s) | 499, 662, 874, 1846, 2206, 3040 |
| BssECI | CCNNGG | 8 cut(s) | 617, 1090, 1497, 1716, 1798, 2466, 2776, 2878 |
| BssSI | CACGAG | 4 cut(s) | 763, 1834, 2628, 2690 |
| BssT1I | CCWWGG | 7 cut(s) | 617, 1090, 1716, 1798, 2466, 2776, 2878 |
| Bst2BI | CACGAG | 4 cut(s) | 763, 1834, 2628, 2690 |
| Bst2UI | CCWGG | 3 cut(s) | 1250, 1499, 2173 |
| Bst6I | CTCTTC | 2 cut(s) | 1140, 2807 |
| BstAUI | TGTACA | 1 cut(s) | 110 |
| BstBAI | YACGTR | 2 cut(s) | 116, 2720 |
| BstBI | TTCGAA | 1 cut(s) | 1147 |
| BstC8I | GCNNGC | 8 cut(s) | 562, 1462, 1643, 1647, 2142, 2146, 2715, 2927 |
| BstDEI | CTNAG | 8 cut(s) | 81, 291, 1317, 1703, 2131, 2318, 2454, 3176 |
| BstFNI | CGCG | 3 cut(s) | 1140, 2571, 3216 |
| BstH2I | RGCGCY | 1 cut(s) | 2615 |
| BstHHI | GCGC | 3 cut(s) | 2614, 2925, 3216 |
| BstMAI | GTCTC | 4 cut(s) | 325, 890, 1265, 1873 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 737, 979, 2019, 2154 |
| BstNI | CCWGG | 3 cut(s) | 1250, 1499, 2173 |
| BstNSI | RCATGY | 2 cut(s) | 1928, 2144 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 351 |
| BstSCI | CCNGG | 4 cut(s) | 821, 1248, 1497, 2171 |
| BstSFI | CTRYAG | 4 cut(s) | 342, 989, 2748, 3123 |
| BstSLI | GKGCMC | 4 cut(s) | 625, 1798, 1812, 2024 |
| BstUI | CGCG | 3 cut(s) | 1140, 2571, 3216 |
| BstV1I | GCAGC | 9 cut(s) | 457, 1661, 1921, 1965, 2023, 2294, 2427, 2500, 3249 |
| BstV2I | GAAGAC | 1 cut(s) | 1363 |
| BstX2I | RGATCY | 4 cut(s) | 1217, 1593, 2754, 2949 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2630 |
| BstYI | RGATCY | 4 cut(s) | 1217, 1593, 2754, 2949 |
| Bsu36I | CCTNAGG | 2 cut(s) | 81, 2131 |
| BsuRI | GGCC | 7 cut(s) | 29, 1048, 1089, 1948, 2601, 2850, 2946 |
| BtsI | GCAGTG | 3 cut(s) | 727, 1482, 3098 |
| BtsIMutI | CAGTG | 8 cut(s) | 727, 1224, 1273, 1482, 2812, 2970, 3098, 3228 |
| BtuMI | TCGCGA | 1 cut(s) | 2571 |
| BveI | ACCTGC | 1 cut(s) | 1378 |
| Cac8I | GCNNGC | 8 cut(s) | 562, 1462, 1643, 1647, 2142, 2146, 2715, 2927 |
| CfoI | GCGC | 3 cut(s) | 2614, 2925, 3216 |
| Cfr13I | GGNCC | 6 cut(s) | 28, 77, 614, 1046, 2175, 2944 |
| CseI | GACGC | 1 cut(s) | 1926 |
| Csp6I | GTAC | 5 cut(s) | 111, 1839, 1899, 1917, 2565 |
| CviQI | GTAC | 5 cut(s) | 111, 1839, 1899, 1917, 2565 |
| DdeI | CTNAG | 8 cut(s) | 81, 291, 1317, 1703, 2131, 2318, 2454, 3176 |
| DraI | TTTAAA | 1 cut(s) | 736 |
| DraIII | CACNNNGTG | 1 cut(s) | 680 |
| EaeI | YGGCCR | 2 cut(s) | 2599, 2848 |
| Eam1104I | CTCTTC | 2 cut(s) | 1140, 2807 |
| EarI | CTCTTC | 2 cut(s) | 1140, 2807 |
| Ecl136II | GAGCTC | 5 cut(s) | 88, 295, 886, 1401, 3232 |
| Eco130I | CCWWGG | 7 cut(s) | 617, 1090, 1716, 1798, 2466, 2776, 2878 |
| Eco24I | GRGCYC | 5 cut(s) | 90, 297, 888, 1403, 3234 |
| Eco32I | GATATC | 2 cut(s) | 496, 1779 |
| Eco47I | GGWCC | 3 cut(s) | 77, 614, 2175 |
| Eco47III | AGCGCT | 1 cut(s) | 2613 |
| Eco53kI | GAGCTC | 5 cut(s) | 88, 295, 886, 1401, 3232 |
| Eco57I | CTGAAG | 2 cut(s) | 1457, 2788 |
| Eco72I | CACGTG | 1 cut(s) | 2720 |
| Eco81I | CCTNAGG | 2 cut(s) | 81, 2131 |
| EcoICRI | GAGCTC | 5 cut(s) | 88, 295, 886, 1401, 3232 |
| EcoO109I | RGGNCCY | 2 cut(s) | 614, 2175 |
| EcoRII | CCWGG | 3 cut(s) | 1248, 1497, 2171 |
| EcoRV | GATATC | 2 cut(s) | 496, 1779 |
| EcoT14I | CCWWGG | 7 cut(s) | 617, 1090, 1716, 1798, 2466, 2776, 2878 |
| EcoT22I | ATGCAT | 3 cut(s) | 733, 937, 2494 |
| EcoT38I | GRGCYC | 5 cut(s) | 90, 297, 888, 1403, 3234 |
| ErhI | CCWWGG | 7 cut(s) | 617, 1090, 1716, 1798, 2466, 2776, 2878 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1857, 1889 |
| FaqI | GGGAC | 2 cut(s) | 1891, 2377 |
| FauI | CCCGC | 1 cut(s) | 2547 |
| FauNDI | CATATG | 4 cut(s) | 577, 1012, 2016, 2371 |
| FbaI | TGATCA | 1 cut(s) | 814 |
| FriOI | GRGCYC | 5 cut(s) | 90, 297, 888, 1403, 3234 |
| FspBI | CTAG | 9 cut(s) | 798, 1412, 1428, 1646, 2190, 2211, 2414, 2609, 2879 |
| GlaI | GCGC | 3 cut(s) | 2613, 2924, 3215 |
| GsuI | CTGGAG | 3 cut(s) | 1134, 1440, 3023 |
| HaeII | RGCGCY | 1 cut(s) | 2615 |
| HaeIII | GGCC | 7 cut(s) | 29, 1048, 1089, 1948, 2601, 2850, 2946 |
| HapII | CCGG | 4 cut(s) | 75, 822, 995, 1515 |
| HgaI | GACGC | 1 cut(s) | 1926 |
| HhaI | GCGC | 3 cut(s) | 2614, 2925, 3216 |
| Hin6I | GCGC | 3 cut(s) | 2612, 2923, 3214 |
| HinP1I | GCGC | 3 cut(s) | 2612, 2923, 3214 |
| HincII | GTYRAC | 3 cut(s) | 1057, 1851, 2977 |
| HindII | GTYRAC | 3 cut(s) | 1057, 1851, 2977 |
| HindIII | AAGCTT | 2 cut(s) | 1258, 2108 |
| HpaI | GTTAAC | 1 cut(s) | 1851 |
| HpaII | CCGG | 4 cut(s) | 75, 822, 995, 1515 |
| Hpy166II | GTNNAC | 9 cut(s) | 113, 1057, 1665, 1851, 2075, 2479, 2547, 2773, 2977 |
| Hpy8I | GTNNAC | 9 cut(s) | 113, 1057, 1665, 1851, 2075, 2479, 2547, 2773, 2977 |
| Hpy99I | CGWCG | 2 cut(s) | 1942, 2453 |
| HpyAV | CCTTC | 9 cut(s) | 174, 765, 1255, 1319, 1766, 2063, 2338, 2452, 2819 |
| HpyCH4IV | ACGT | 5 cut(s) | 45, 115, 1992, 2719, 2845 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 737, 979, 2019, 2154 |
| HpyF3I | CTNAG | 8 cut(s) | 81, 291, 1317, 1703, 2131, 2318, 2454, 3176 |
| HpySE526I | ACGT | 5 cut(s) | 45, 115, 1992, 2719, 2845 |
| HspAI | GCGC | 3 cut(s) | 2612, 2923, 3214 |
| Ksp22I | TGATCA | 1 cut(s) | 814 |
| KspAI | GTTAAC | 1 cut(s) | 1851 |
| Lsp1109I | GCAGC | 9 cut(s) | 457, 1661, 1921, 1965, 2023, 2294, 2427, 2500, 3249 |
| MaeI | CTAG | 9 cut(s) | 798, 1412, 1428, 1646, 2190, 2211, 2414, 2609, 2879 |
| MaeII | ACGT | 5 cut(s) | 45, 115, 1992, 2719, 2845 |
| MaeIII | GTNAC | 7 cut(s) | 22, 46, 865, 1102, 1390, 2505, 2720 |
| MfeI | CAATTG | 2 cut(s) | 708, 2091 |
| MflI | RGATCY | 4 cut(s) | 1217, 1593, 2754, 2949 |
| MlyI | GAGTC | 7 cut(s) | 387, 867, 1873, 2542, 2620, 2927, 3000 |
| MmeI | TCCRAC | 6 cut(s) | 220, 1287, 1563, 1636, 1920, 3052 |
| Mph1103I | ATGCAT | 3 cut(s) | 733, 937, 2494 |
| MroXI | GAANNNNTTC | 2 cut(s) | 126, 2492 |
| MslI | CAYNNNNRTG | 2 cut(s) | 402, 2880 |
| MspA1I | CMGCKG | 1 cut(s) | 2747 |
| MspI | CCGG | 4 cut(s) | 75, 822, 995, 1515 |
| MspR9I | CCNGG | 4 cut(s) | 823, 1250, 1499, 2173 |
| MunI | CAATTG | 2 cut(s) | 708, 2091 |
| Mva1269I | GAATGC | 4 cut(s) | 2409, 2492, 2494, 2591 |
| MvaI | CCWGG | 3 cut(s) | 1250, 1499, 2173 |
| MvnI | CGCG | 3 cut(s) | 1140, 2571, 3216 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 737, 979, 2019, 2154 |
| NciI | CCSGG | 1 cut(s) | 823 |
| NdeI | CATATG | 4 cut(s) | 577, 1012, 2016, 2371 |
| NheI | GCTAGC | 1 cut(s) | 1645 |
| NlaIV | GGNNCC | 3 cut(s) | 615, 1047, 1811 |
| NmuCI | GTSAC | 5 cut(s) | 22, 46, 865, 1390, 2720 |
| NruI | TCGCGA | 1 cut(s) | 2571 |
| NsiI | ATGCAT | 3 cut(s) | 733, 937, 2494 |
| NspI | RCATGY | 2 cut(s) | 1928, 2144 |
| NspV | TTCGAA | 1 cut(s) | 1147 |
| OliI | CACNNNNGTG | 1 cut(s) | 2880 |
| PaeI | GCATGC | 1 cut(s) | 2144 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 334, 1144 |
| PctI | GAATGC | 4 cut(s) | 2409, 2492, 2494, 2591 |
| PdmI | GAANNNNTTC | 2 cut(s) | 126, 2492 |
| PfeI | GAWTC | 5 cut(s) | 965, 1161, 1291, 2222, 3161 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 680 |
| PfoI | TCCNGGA | 1 cut(s) | 2171 |
| PleI | GAGTC | 7 cut(s) | 387, 867, 1873, 2542, 2620, 2927, 2999 |
| PmaCI | CACGTG | 1 cut(s) | 2720 |
| PmlI | CACGTG | 1 cut(s) | 2720 |
| PpsI | GAGTC | 7 cut(s) | 387, 867, 1873, 2542, 2620, 2927, 2999 |
| Ppu21I | YACGTR | 2 cut(s) | 116, 2720 |
| PpuMI | RGGWCCY | 2 cut(s) | 614, 2175 |
| PshAI | GACNNNNGTC | 1 cut(s) | 351 |
| PshBI | ATTAAT | 1 cut(s) | 386 |
| PsiI | TTATAA | 1 cut(s) | 845 |
| Psp124BI | GAGCTC | 5 cut(s) | 90, 297, 888, 1403, 3234 |
| Psp5II | RGGWCCY | 2 cut(s) | 614, 2175 |
| Psp6I | CCWGG | 3 cut(s) | 1248, 1497, 2171 |
| PspCI | CACGTG | 1 cut(s) | 2720 |
| PspGI | CCWGG | 3 cut(s) | 1248, 1497, 2171 |
| PspN4I | GGNNCC | 3 cut(s) | 615, 1047, 1811 |
| PspPI | GGNCC | 6 cut(s) | 28, 77, 614, 1046, 2175, 2944 |
| PspPPI | RGGWCCY | 2 cut(s) | 614, 2175 |
| PsuI | RGATCY | 4 cut(s) | 1217, 1593, 2754, 2949 |
| PvuII | CAGCTG | 1 cut(s) | 2747 |
| RruI | TCGCGA | 1 cut(s) | 2571 |
| RsaI | GTAC | 5 cut(s) | 112, 1840, 1900, 1918, 2566 |
| RsaNI | GTAC | 5 cut(s) | 111, 1839, 1899, 1917, 2565 |
| RseI | CAYNNNNRTG | 2 cut(s) | 402, 2880 |
| SacI | GAGCTC | 5 cut(s) | 90, 297, 888, 1403, 3234 |
| Sau96I | GGNCC | 6 cut(s) | 28, 77, 614, 1046, 2175, 2944 |
| ScaI | AGTACT | 2 cut(s) | 1840, 1918 |
| SchI | GAGTC | 7 cut(s) | 387, 867, 1873, 2542, 2620, 2927, 3000 |
| ScrFI | CCNGG | 4 cut(s) | 823, 1250, 1499, 2173 |
| SfcI | CTRYAG | 4 cut(s) | 342, 989, 2748, 3123 |
| SfuI | TTCGAA | 1 cut(s) | 1147 |
| SinI | GGWCC | 3 cut(s) | 77, 614, 2175 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 402, 2880 |
| SmlI | CTYRAG | 7 cut(s) | 449, 473, 1076, 1295, 1338, 2855, 3049 |
| SmoI | CTYRAG | 7 cut(s) | 449, 473, 1076, 1295, 1338, 2855, 3049 |
| SpeI | ACTAGT | 1 cut(s) | 1411 |
| SphI | GCATGC | 1 cut(s) | 2144 |
| SsiI | CCGC | 4 cut(s) | 1708, 2242, 2554, 2589 |
| SspMI | CTAG | 9 cut(s) | 798, 1412, 1428, 1646, 2190, 2211, 2414, 2609, 2879 |
| SstI | GAGCTC | 5 cut(s) | 90, 297, 888, 1403, 3234 |
| StyD4I | CCNGG | 4 cut(s) | 821, 1248, 1497, 2171 |
| StyI | CCWWGG | 7 cut(s) | 617, 1090, 1716, 1798, 2466, 2776, 2878 |
| TaiI | ACGT | 5 cut(s) | 48, 118, 1995, 2722, 2848 |
| TaqI | TCGA | 7 cut(s) | 205, 1017, 1147, 1397, 1469, 2289, 3159 |
| TatI | WGTACW | 3 cut(s) | 110, 1838, 1916 |
| TauI | GCSGC | 1 cut(s) | 1710 |
| TfiI | GAWTC | 5 cut(s) | 965, 1161, 1291, 2222, 3161 |
| TscAI | CASTG | 8 cut(s) | 727, 1231, 1273, 1489, 2812, 2977, 3098, 3228 |
| TseFI | GTSAC | 5 cut(s) | 22, 46, 865, 1390, 2720 |
| TseI | GCWGC | 9 cut(s) | 445, 1649, 1934, 1978, 2036, 2307, 2440, 2513, 3262 |
| Tsp45I | GTSAC | 5 cut(s) | 22, 46, 865, 1390, 2720 |
| TspGWI | ACGGA | 2 cut(s) | 192, 1886 |
| TspRI | CASTG | 8 cut(s) | 727, 1231, 1273, 1489, 2812, 2977, 3098, 3228 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 680 |
| VpaK11BI | GGWCC | 3 cut(s) | 77, 614, 2175 |
| VspI | ATTAAT | 1 cut(s) | 386 |
| XapI | RAATTY | 8 cut(s) | 123, 257, 1278, 1819, 1996, 2885, 3136, 3198 |
| XceI | RCATGY | 2 cut(s) | 1928, 2144 |
| XcmI | CCANNNNNNNNNTGG | 4 cut(s) | 404, 506, 1723, 3139 |
| XmaJI | CCTAGG | 1 cut(s) | 2878 |
| XmnI | GAANNNNTTC | 2 cut(s) | 126, 2492 |
| XspI | CTAG | 9 cut(s) | 798, 1412, 1428, 1646, 2190, 2211, 2414, 2609, 2879 |
| ZrmI | AGTACT | 2 cut(s) | 1840, 1918 |
| Zsp2I | ATGCAT | 3 cut(s) | 733, 937, 2494 |