Basic Information
Type: gene
Biological Identity
arabidopsis_thaliana
Physical Location & Seq
Forward (+)
11265479 .. 11267056
AT4G21105.1
Length: 207 bp
ATGTTGACTGAAACTCCATTTAGGCCACGAGAGAAGCTTCTGGAGAAACAGAGATTGTTCCAGAGCATCCAAAGGCACACTTACTTGAAAGGACCAATGGACAAGATCACTTCTGTTGCTATTCCTATTGCCTTGGCTGCAAGTTCTCTCTACATGATTGGAACAGGAATCTACAACATGTCGAATGGAATCGGCAAAAAGGAATAA
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Protein Analysis
9.9
Isoelectric Point (pI)
| Domain Name |
Pfam ID |
Position |
E-value |
Description |
| COX7a |
PF02238 |
11 - 63 |
1.9e-14 |
Cytochrome c oxidase subunit VII |
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...
Gene Family Tree
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Publication-ready
Orthologous Genes
(Group: OG0011983)
Restriction Enzyme Sites
| Enzyme |
Recognition Site |
Cut Count |
Positions (bp) |
| AflIII |
ACRYGT |
1 cut(s)
|
177 |
| AgsI |
TTSAA |
1 cut(s)
|
88 |
| AluBI |
AGCT |
1 cut(s)
|
37 |
| AluI |
AGCT |
1 cut(s)
|
37 |
| AoxI |
GGCC |
1 cut(s)
|
23 |
| ApeKI |
GCWGC |
1 cut(s)
|
137 |
| AspS9I |
GGNCC |
1 cut(s)
|
92 |
| AvaII |
GGWCC |
1 cut(s)
|
92 |
| BauI |
CACGAG |
1 cut(s)
|
27 |
| BbvI |
GCAGC |
1 cut(s)
|
124 |
| BisI |
GCNGC |
1 cut(s)
|
138 |
| BlsI |
GCNGC |
1 cut(s)
|
139 |
| Bme18I |
GGWCC |
1 cut(s)
|
92 |
| BmgT120I |
GGNCC |
1 cut(s)
|
92 |
| BmsI |
GCATC |
1 cut(s)
|
75 |
| BpmI |
CTGGAG |
1 cut(s)
|
62 |
| BsaJI |
CCNNGG |
1 cut(s)
|
132 |
| BsaXI |
ACNNNNNCTCC |
1 cut(s)
|
28 |
| BseDI |
CCNNGG |
1 cut(s)
|
132 |
| BseGI |
GGATG |
1 cut(s)
|
66 |
| BseXI |
GCAGC |
1 cut(s)
|
124 |
| BshFI |
GGCC |
1 cut(s)
|
25 |
| BsnI |
GGCC |
1 cut(s)
|
25 |
| Bsp143I |
GATC |
1 cut(s)
|
105 |
| BspANI |
GGCC |
1 cut(s)
|
25 |
| BssECI |
CCNNGG |
1 cut(s)
|
132 |
| BssMI |
GATC |
1 cut(s)
|
105 |
| BssSI |
CACGAG |
1 cut(s)
|
27 |
| BssT1I |
CCWWGG |
1 cut(s)
|
132 |
| Bst2BI |
CACGAG |
1 cut(s)
|
27 |
| BstF5I |
GGATG |
1 cut(s)
|
66 |
| BstKTI |
GATC |
1 cut(s)
|
108 |
| BstMBI |
GATC |
1 cut(s)
|
105 |
| BstMWI |
GCNNNNNNNGC |
1 cut(s)
|
137 |
| BstNSI |
RCATGY |
1 cut(s)
|
181 |
| BstV1I |
GCAGC |
1 cut(s)
|
124 |
| BsuRI |
GGCC |
1 cut(s)
|
25 |
| BtsCI |
GGATG |
1 cut(s)
|
66 |
| Cfr13I |
GGNCC |
1 cut(s)
|
92 |
| CviAII |
CATG |
2 cut(s)
|
154, 178 |
| CviJI |
RGCY |
3 cut(s)
|
25, 37, 137 |
| CviKI_1 |
RGCY |
3 cut(s)
|
25, 37, 137 |
| DpnI |
GATC |
1 cut(s)
|
107 |
| DpnII |
GATC |
1 cut(s)
|
105 |
| Eco130I |
CCWWGG |
1 cut(s)
|
132 |
| Eco47I |
GGWCC |
1 cut(s)
|
92 |
| EcoT14I |
CCWWGG |
1 cut(s)
|
132 |
| ErhI |
CCWWGG |
1 cut(s)
|
132 |
| FaeI |
CATG |
2 cut(s)
|
157, 181 |
| FaiI |
YATR |
2 cut(s)
|
155, 179 |
| FalI |
AAGNNNNNCTT |
2 cut(s)
|
64, 96 |
| FatI |
CATG |
2 cut(s)
|
153, 177 |
| Fnu4HI |
GCNGC |
1 cut(s)
|
138 |
| FokI |
GGATG |
1 cut(s)
|
53 |
| Fsp4HI |
GCNGC |
1 cut(s)
|
138 |
| GluI |
GCNGC |
1 cut(s)
|
138 |
| GsuI |
CTGGAG |
1 cut(s)
|
62 |
| HaeIII |
GGCC |
1 cut(s)
|
25 |
| Hin1II |
CATG |
2 cut(s)
|
157, 181 |
| HincII |
GTYRAC |
1 cut(s)
|
6 |
| HindII |
GTYRAC |
1 cut(s)
|
6 |
| HindIII |
AAGCTT |
1 cut(s)
|
35 |
| HinfI |
GANTC |
2 cut(s)
|
168, 189 |
| Hpy166II |
GTNNAC |
1 cut(s)
|
6 |
| Hpy188III |
TCNNGA |
2 cut(s)
|
41, 61 |
| Hpy8I |
GTNNAC |
1 cut(s)
|
6 |
| HpyCH4V |
TGCA |
1 cut(s)
|
140 |
| HpyF10VI |
GCNNNNNNNGC |
1 cut(s)
|
137 |
| Hsp92II |
CATG |
2 cut(s)
|
157, 181 |
| Kzo9I |
GATC |
1 cut(s)
|
105 |
| LpnPI |
CCDG |
3 cut(s)
|
26, 74, 150 |
| Lsp1109I |
GCAGC |
1 cut(s)
|
124 |
| LweI |
GCATC |
1 cut(s)
|
75 |
| MalI |
GATC |
1 cut(s)
|
107 |
| MboI |
GATC |
1 cut(s)
|
105 |
| MwoI |
GCNNNNNNNGC |
1 cut(s)
|
137 |
| NdeII |
GATC |
1 cut(s)
|
105 |
| NlaIII |
CATG |
2 cut(s)
|
157, 181 |
| NspI |
RCATGY |
1 cut(s)
|
181 |
| PciI |
ACATGT |
1 cut(s)
|
177 |
| PfeI |
GAWTC |
2 cut(s)
|
168, 189 |
| PkrI |
GCNGC |
1 cut(s)
|
139 |
| PscI |
ACATGT |
1 cut(s)
|
177 |
| PspPI |
GGNCC |
1 cut(s)
|
92 |
| SatI |
GCNGC |
1 cut(s)
|
138 |
| Sau3AI |
GATC |
1 cut(s)
|
105 |
| Sau96I |
GGNCC |
1 cut(s)
|
92 |
| SetI |
ASST |
1 cut(s)
|
39 |
| SfaNI |
GCATC |
1 cut(s)
|
75 |
| SinI |
GGWCC |
1 cut(s)
|
92 |
| StyI |
CCWWGG |
1 cut(s)
|
132 |
| TaqI |
TCGA |
1 cut(s)
|
182 |
| TfiI |
GAWTC |
2 cut(s)
|
168, 189 |
| TseI |
GCWGC |
1 cut(s)
|
137 |
| VpaK11BI |
GGWCC |
1 cut(s)
|
92 |
| XceI |
RCATGY |
1 cut(s)
|
181 |
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.