Cytochrome c oxidase subunit VII
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G21105 AT4G21105 AT4G21105 |
| fragaria_vesca | FvH4_3g29830 |
| malus_domestica | MD03G1137200.v1.1 MD03G1165300.v1.1 MD11G1159300.v1.1 |
| prunus_persica | Prupe.6G122400_v2.0.a1 |
| pyrus_communis | pycom03g09300 pycom11g12990 |
| rosa_chinensis | RchiOBHm_Chr5g0055141 |
| rosa_multiflora | Rmu_sc0001694.1_g000052 Rmu_sc0010632.1_g000011 |
| rosa_roxburghii | Rroxscaffold_1G00025220 |
| rosa_samantha | Rh5AG361400 Rh5BG372600 Rh5CG394400 Rh5DG386000 |
| rosa_wichuraiana | Rw5G033980 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 171 |
| AcsI | RAATTY | 1 cut(s) | 53 |
| AcuI | CTGAAG | 1 cut(s) | 107 |
| AcvI | CACGTG | 1 cut(s) | 29 |
| AflIII | ACRYGT | 1 cut(s) | 177 |
| AluBI | AGCT | 3 cut(s) | 37, 128, 137 |
| AluI | AGCT | 3 cut(s) | 37, 128, 137 |
| Ama87I | CYCGRG | 1 cut(s) | 41 |
| ApeKI | GCWGC | 2 cut(s) | 128, 137 |
| ApoI | RAATTY | 1 cut(s) | 53 |
| AspS9I | GGNCC | 1 cut(s) | 92 |
| AsuHPI | GGTGA | 1 cut(s) | 100 |
| AvaI | CYCGRG | 1 cut(s) | 41 |
| AvaII | GGWCC | 1 cut(s) | 92 |
| BauI | CACGAG | 1 cut(s) | 162 |
| BbrPI | CACGTG | 1 cut(s) | 29 |
| BbvI | GCAGC | 2 cut(s) | 115, 124 |
| BisI | GCNGC | 2 cut(s) | 129, 138 |
| BlsI | GCNGC | 2 cut(s) | 130, 139 |
| Bme18I | GGWCC | 1 cut(s) | 92 |
| BmeT110I | CYCGRG | 1 cut(s) | 41 |
| BmgT120I | GGNCC | 1 cut(s) | 92 |
| BmiI | GGNNCC | 2 cut(s) | 93, 94 |
| BmsI | GCATC | 2 cut(s) | 75, 149 |
| BsaAI | YACGTR | 1 cut(s) | 29 |
| BseGI | GGATG | 1 cut(s) | 66 |
| BseRI | GAGGAG | 2 cut(s) | 29, 180 |
| BseXI | GCAGC | 2 cut(s) | 115, 124 |
| BsiHKCI | CYCGRG | 1 cut(s) | 41 |
| BslFI | GGGAC | 1 cut(s) | 105 |
| BsmFI | GGGAC | 1 cut(s) | 105 |
| BsoBI | CYCGRG | 1 cut(s) | 41 |
| Bsp143I | GATC | 1 cut(s) | 105 |
| BspLI | GGNNCC | 2 cut(s) | 93, 94 |
| BssMI | GATC | 1 cut(s) | 105 |
| BssSI | CACGAG | 1 cut(s) | 162 |
| Bst2BI | CACGAG | 1 cut(s) | 162 |
| BstBAI | YACGTR | 1 cut(s) | 29 |
| BstF5I | GGATG | 1 cut(s) | 66 |
| BstKTI | GATC | 1 cut(s) | 108 |
| BstMBI | GATC | 1 cut(s) | 105 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 125, 134, 137 |
| BstNSI | RCATGY | 1 cut(s) | 181 |
| BstV1I | GCAGC | 2 cut(s) | 115, 124 |
| BtsCI | GGATG | 1 cut(s) | 66 |
| Cfr13I | GGNCC | 1 cut(s) | 92 |
| CviAII | CATG | 2 cut(s) | 178, 185 |
| CviJI | RGCY | 3 cut(s) | 37, 128, 137 |
| CviKI_1 | RGCY | 3 cut(s) | 37, 128, 137 |
| DpnI | GATC | 1 cut(s) | 107 |
| DpnII | GATC | 1 cut(s) | 105 |
| Eco47I | GGWCC | 1 cut(s) | 92 |
| Eco57I | CTGAAG | 1 cut(s) | 107 |
| Eco72I | CACGTG | 1 cut(s) | 29 |
| Eco88I | CYCGRG | 1 cut(s) | 41 |
| EcoO109I | RGGNCCY | 1 cut(s) | 92 |
| FaeI | CATG | 2 cut(s) | 181, 188 |
| FaiI | YATR | 4 cut(s) | 82, 99, 179, 186 |
| FaqI | GGGAC | 1 cut(s) | 105 |
| FatI | CATG | 2 cut(s) | 177, 184 |
| FblI | GTMKAC | 1 cut(s) | 171 |
| Fnu4HI | GCNGC | 2 cut(s) | 129, 138 |
| FokI | GGATG | 1 cut(s) | 53 |
| Fsp4HI | GCNGC | 2 cut(s) | 129, 138 |
| GluI | GCNGC | 2 cut(s) | 129, 138 |
| Hin1II | CATG | 2 cut(s) | 181, 188 |
| HinfI | GANTC | 1 cut(s) | 168 |
| HphI | GGTGA | 1 cut(s) | 100 |
| Hpy166II | GTNNAC | 1 cut(s) | 172 |
| Hpy188I | TCNGA | 3 cut(s) | 7, 23, 87 |
| Hpy188III | TCNNGA | 1 cut(s) | 43 |
| Hpy8I | GTNNAC | 1 cut(s) | 172 |
| HpyAV | CCTTC | 3 cut(s) | 28, 82, 193 |
| HpyCH4IV | ACGT | 1 cut(s) | 28 |
| HpyCH4V | TGCA | 2 cut(s) | 140, 161 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 125, 134, 137 |
| HpySE526I | ACGT | 1 cut(s) | 28 |
| Hsp92II | CATG | 2 cut(s) | 181, 188 |
| KflI | GGGWCCC | 1 cut(s) | 92 |
| Kzo9I | GATC | 1 cut(s) | 105 |
| LmnI | GCTCC | 1 cut(s) | 42 |
| LpnPI | CCDG | 1 cut(s) | 138 |
| Lsp1109I | GCAGC | 2 cut(s) | 115, 124 |
| LweI | GCATC | 2 cut(s) | 75, 149 |
| MaeII | ACGT | 1 cut(s) | 28 |
| MaeIII | GTNAC | 1 cut(s) | 180 |
| MalI | GATC | 1 cut(s) | 107 |
| MboI | GATC | 1 cut(s) | 105 |
| MboII | GAAGA | 2 cut(s) | 20, 135 |
| MluCI | AATT | 1 cut(s) | 53 |
| MlyI | GAGTC | 1 cut(s) | 177 |
| MmeI | TCCRAC | 1 cut(s) | 46 |
| MnlI | CCTC | 3 cut(s) | 50, 121, 158 |
| MspA1I | CMGCKG | 1 cut(s) | 128 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 125, 134, 137 |
| NdeII | GATC | 1 cut(s) | 105 |
| NlaIII | CATG | 2 cut(s) | 181, 188 |
| NlaIV | GGNNCC | 2 cut(s) | 93, 94 |
| NmuCI | GTSAC | 1 cut(s) | 180 |
| NspI | RCATGY | 1 cut(s) | 181 |
| PaeR7I | CTCGAG | 1 cut(s) | 41 |
| PciI | ACATGT | 1 cut(s) | 177 |
| PkrI | GCNGC | 2 cut(s) | 130, 139 |
| PleI | GAGTC | 1 cut(s) | 176 |
| PmaCI | CACGTG | 1 cut(s) | 29 |
| PmlI | CACGTG | 1 cut(s) | 29 |
| PpsI | GAGTC | 1 cut(s) | 176 |
| Ppu21I | YACGTR | 1 cut(s) | 29 |
| PpuMI | RGGWCCY | 1 cut(s) | 92 |
| PscI | ACATGT | 1 cut(s) | 177 |
| Psp5II | RGGWCCY | 1 cut(s) | 92 |
| PspCI | CACGTG | 1 cut(s) | 29 |
| PspN4I | GGNNCC | 2 cut(s) | 93, 94 |
| PspPI | GGNCC | 1 cut(s) | 92 |
| PspPPI | RGGWCCY | 1 cut(s) | 92 |
| PvuII | CAGCTG | 1 cut(s) | 128 |
| SatI | GCNGC | 2 cut(s) | 129, 138 |
| Sau3AI | GATC | 1 cut(s) | 105 |
| Sau96I | GGNCC | 1 cut(s) | 92 |
| SchI | GAGTC | 1 cut(s) | 177 |
| SetI | ASST | 5 cut(s) | 31, 39, 113, 130, 139 |
| SfaNI | GCATC | 2 cut(s) | 75, 149 |
| Sfr274I | CTCGAG | 1 cut(s) | 41 |
| SgeI | CNNG | 9 cut(s) | 39, 41, 53, 55, 137, 174, 176, 190, 197 |
| SinI | GGWCC | 1 cut(s) | 92 |
| SlaI | CTCGAG | 1 cut(s) | 41 |
| SmlI | CTYRAG | 1 cut(s) | 41 |
| SmoI | CTYRAG | 1 cut(s) | 41 |
| Sse9I | AATT | 1 cut(s) | 53 |
| TaiI | ACGT | 1 cut(s) | 31 |
| TaqI | TCGA | 1 cut(s) | 42 |
| TasI | AATT | 1 cut(s) | 53 |
| TseFI | GTSAC | 1 cut(s) | 180 |
| TseI | GCWGC | 2 cut(s) | 128, 137 |
| Tsp45I | GTSAC | 1 cut(s) | 180 |
| VpaK11BI | GGWCC | 1 cut(s) | 92 |
| XapI | RAATTY | 1 cut(s) | 53 |
| XceI | RCATGY | 1 cut(s) | 181 |
| XhoI | CTCGAG | 1 cut(s) | 41 |
| XmiI | GTMKAC | 1 cut(s) | 171 |