AT4G23940

Peptidase family M41

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Forward (+)
12437108 .. 12442030
4923 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G23940.1

Sequence Viewer

Length: 2841 bp
ATGGCGTCTATAGACAATGTTTTCTCACTCGGTACTCGGTTCTCAATCCCAGAAAACCCCAAGAGATCGATATTGAAACACGCGACTACATCGAGTTTCTCCGCGAGAACTCAAACTCGATGGAGAGCTCCAATTCTGCGTCGGTCGTTTACAGTTTTGTGCGAATTGAAAACTGGGTCATCTAGCTCCGGCGAGACGAACAATTCCCCTGCTGCTGACGATTTCGTAACTAGGGTTTTGAAGGAGAATCCTAGCCAAGTGGAACCTCGTTACCGAGTTGGTGATAAGCTGTATAATCTGAAGGAGAGAGAAGATTTAAGCAAAGGCACCAATGCGGCGACGGGTGCGTTTGAATTTATCAAAAGGAAGTTTGATTCGAAGAAGAAAACAGAGACAGACAAAAGCGAAGAGTCTGTTTATTTGAGTGATATTTTGAGGGAGTACAAAGGAAAGCTTTATGTTCCGGAGCAAGTTTTTGGGCCAGAGTTATCTGAAGAAGAGGAGTTTGAGAAAAATGTGAAAGATTTACCAAAGATGAGTTTGGAAGATTTTAGAAAAGCTATGGAGAATGATAAAGTTAAGCTGCTTACATCGAAGGAAGTTTCTGGTGTTTCTTATACGAGTGGCTATAGAGGTTTTATTGTTGATCTTAAGGAGATTCCTGGAGTCAAGAGCTTACAGAGAACCAAATGGTCAATGAAGCTTGAAGTTGGAGAAGCTCAAGCTCTTCTGAAAGAATACACGGGTCCGCAGTACGAAATTGAAAGGCACATGACGTCTTGGGTTGGAAAAGTGGCGGACTTCCCAAACCCTGTTGCGTCTTCTATTTCAAGTAGAGTGATGGTTGAGCTGGGAATGGTGACAGCAGTTATTGCTGCAGCCGCAGTTGTTGTTGGAGGATTCTTAGCCTCAGCTGTTTTTGCAGTCACTAGTTTCGCCTTTGTCACTACAGTATATGTTGTTTGGCCTATAGCAAAGCCATTCCTCAAACTTTTTGTTGGCGTCTTCCTTGGTGTTCTTGAAAAATCATGGGATTACATTGTTGATGTTCTCGCCGATGGGGGCATCTTCTCAAGGATTTCTGATTTCTATACATTTGGTGGTGTAGCATCAAGTCTGGAGATGCTCAAACCAATCCTACTTGTTGTCATGACTATGGTTCTTCTTGTTCGTTTCACACTGTCACGGAGACCAAAGAACTTTAGGAAATGGGATTTATGGCAAGGGATTGCTTTTTCTCAGTCTAAAGCAGAAGCTCGTGTTGATGGTTCAACCGGTGTTAAATTCGCTGATGTTGCAGGGATTGATGAAGCAGTTGATGAACTTCAAGAGCTTGTAAAGTACTTGAAGAATCCCGACCTGTTTGATAAAATGGGAATTAAACCTCCCCATGGAGTTCTTCTGGAGGGTCCCCCTGGTTGTGGCAAGACACTCGTTGCAAAAGCCATTGCGGGGGAAGCTGGTGTACCGTTCTACCAAATGGCAGGATCTGAATTCGTCGAAGTTCTTGTTGGAGTTGGGTCAGCTCGTATCAGAGATCTGTTTAAAAGAGCTAAGGTAAACAAGCCATCCGTTATTTTCATCGATGAAATTGATGCCTTAGCAACTCGACGTCAAGGGATTTTCAAGGAAAACTCAGACCAGTTGTACAATGCGGCCACACAAGAAAGAGAAACCACATTGAACCAGCTACTCATCGAGCTTGATGGTTTTGACACAGGCAAAGGTGTGATTTTCTTGGGTGCCACCAATCGCAGAGATTTGTTAGACCCTGCTCTTCTACGTCCAGGTCGATTTGATCGAAAGATAAGAGTCCGTCCCCCTAATGCGAAAGGGAGATTGGATATTCTGAAGATTCATGCCAGCAAAGTCAAGATGTCGGATTCTGTTGACTTATCATCTTATGCAAGTAACTTACCAGGATGGTCCGGAGCAAAACTGGCACAGTTGGTTCAAGAGGCTGCTCTTGTAGCTGTCAGGAAAACGCATAACTCGATTCTTCAATCAGACATGGACGACGCTGTGGACCGACTCACTGTTGGTCCGACACGTATTGGTTTAGAATTGGGACATCAAGGTCAGTGTCGTAGAGCCACAACTGAAGTCGGAGTGGCAATCACTTCACATCTTTTATTGCGGTATGAGAATGCAAAGATTGAGCGGTGCGATCGCGTTTCTATCATTCCTCGTGGTCAGACACTGTCTCAAGTTGTGTTTCATCGGCTTGATGATGAGTCCTACATGTTTGGTCGTCTTCCACAACTGCTTCATCGTCTTCAGGTCTTGCTCGGAGGAAGAGCTGCAGAAGAAGTGATCTACGGTTCAGATACTTCAAAGGCATCAGTCGATTATCTCTCTGACGCCTCATGGCTAGCTCGTAAAATCTTAACCATATGGAACCTGGAGAACCCAATGGTGATACATGGCGAACCACCACCATGGAGAAAGAGACCTCAGTTCGTGGGACCACGCTTAGACTTTGAAGGATCTCTCTATGACGACTATGACCTCGTCGAGCCGCCAGTTAACTTCAACATGGATGATGAAGTCGCACATAGAAGCGAAGAACTCATTAGCCAGATGTATAACAAAACAGTTTCTCTCCTCAGGCAAAACCAAACCGCTCTCCTCAAAACCGTTAAGGTTCTATTGAACCAGAAAGAGATAAGTGGAGAAGCAATAGACTTCATACTTGACCATTACCCTCCTCAGACTCCGTTAAATTCTCTCTTACAAGAGCAAAATCCGGGAAGTCTTCCTTTTGTCCCTGAACATCTCCGGCGTGAATCCGGCGACTTTGTCCTTGTTAATCACTCTACCGACGTCAATGCTCAAGTATGA

Protein Analysis

946

Amino Acids

105.54

Weight (kDa)

7.64

Isoelectric Point (pI)

36.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
AAA PF00004 466 - 606 1.8e-39 ATPase family associated with various cellular activities (AAA)
AAA_lid_3 PF17862 629 - 672 1.5e-07 AAA+ lid domain
Peptidase_M41 PF01434 709 - 801 2.9e-11 Peptidase family M41
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011834)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2076
AatII GACGTC 3 cut(s) 779, 1615, 2826
AccB1I GGYRCC 2 cut(s) 326, 1742
AccBSI CCGCTC 2 cut(s) 2161, 2624
AccII CGCG 3 cut(s) 83, 104, 2172
AccIII TCCGGA 2 cut(s) 463, 1928
AclWI GGATC 2 cut(s) 1495, 2494
AcoI YGGCCR 1 cut(s) 1656
AcsI RAATTY 4 cut(s) 353, 1283, 1493, 2722
AcuI CTGAAG 5 cut(s) 320, 513, 1871, 2121, 2261
AcyI GRCGYC 6 cut(s) 5, 776, 1002, 1612, 2361, 2823
AfaI GTAC 6 cut(s) 34, 443, 755, 1343, 1467, 1649
AfiI CCNNNNNNNGG 3 cut(s) 1391, 1421, 1452
AflII CTTAAG 1 cut(s) 650
AflIII ACRYGT 2 cut(s) 2048, 2241
AgeI ACCGGT 1 cut(s) 1274
AhlI ACTAGT 1 cut(s) 929
AjnI CCWGG 5 cut(s) 661, 1414, 1786, 1918, 2400
AjuI GAANNNNNNNTTGG 4 cut(s) 1494, 1526, 1823, 1855
Alw21I GWGCWC 1 cut(s) 130
Alw26I GTCTC 5 cut(s) 188, 386, 1183, 2208, 2443
AlwI GGATC 2 cut(s) 1495, 2494
AlwNI CAGNNNCTG 2 cut(s) 1490, 2200
Aor13HI TCCGGA 2 cut(s) 463, 1928
AoxI GGCC 3 cut(s) 479, 965, 1656
ApeKI GCWGC 6 cut(s) 212, 583, 875, 878, 1961, 2300
ApoI RAATTY 4 cut(s) 353, 1283, 1493, 2722
AsiGI ACCGGT 1 cut(s) 1274
AsiSI GCGATCGC 1 cut(s) 2170
AspS9I GGNCC 7 cut(s) 479, 746, 1409, 1926, 2026, 2042, 2465
AsuC2I CCSGG 1 cut(s) 2748
AsuHPI GGTGA 3 cut(s) 293, 871, 2428
AsuII TTCGAA 1 cut(s) 377
AsuNHI GCTAGC 1 cut(s) 2371
AvaII GGWCC 6 cut(s) 746, 1409, 1926, 2026, 2042, 2465
AxyI CCTNAGG 1 cut(s) 2606
BanI GGYRCC 2 cut(s) 326, 1742
BanII GRGCYC 1 cut(s) 130
BarI GAAGNNNNNNTAC 2 cut(s) 1449, 1481
BauI CACGAG 2 cut(s) 1257, 2187
BbsI GAAGAC 5 cut(s) 813, 997, 2246, 2267, 2747
Bbv12I GWGCWC 1 cut(s) 130
BbvCI CCTCAGC 1 cut(s) 910
BbvI GCAGC 6 cut(s) 199, 570, 862, 890, 1948, 2287
BccI CCATC 7 cut(s) 114, 835, 1052, 1259, 1576, 1700, 1917
BcgI CGANNNNNNTGC 3 cut(s) 1414, 1448, 2810
BciT130I CCWGG 5 cut(s) 663, 1416, 1788, 1920, 2402
BcnI CCSGG 1 cut(s) 2748
BcoDI GTCTC 5 cut(s) 188, 386, 1183, 2208, 2443
BcuI ACTAGT 1 cut(s) 929
BfaI CTAG 5 cut(s) 183, 231, 252, 930, 2372
BfmI CTRYAG 6 cut(s) 9, 628, 876, 948, 969, 2301
BfrI CTTAAG 1 cut(s) 650
BglII AGATCT 1 cut(s) 1537
BmcAI AGTACT 1 cut(s) 1343
Bme1390I CCNGG 6 cut(s) 663, 1416, 1788, 1920, 2402, 2748
Bme18I GGWCC 6 cut(s) 746, 1409, 1926, 2026, 2042, 2465
BmgT120I GGNCC 7 cut(s) 479, 746, 1409, 1926, 2026, 2042, 2465
BmiI GGNNCC 8 cut(s) 264, 328, 747, 1410, 1411, 1744, 2399, 2466
BmrFI CCNGG 6 cut(s) 663, 1416, 1788, 1920, 2402, 2748
BmrI ACTGGG 1 cut(s) 183
BmsI GCATC 5 cut(s) 1074, 1113, 1118, 1585, 2348
BmtI GCTAGC 1 cut(s) 2375
BmuI ACTGGG 1 cut(s) 183
BpiI GAAGAC 5 cut(s) 813, 997, 2246, 2267, 2747
BpmI CTGGAG 4 cut(s) 684, 1139, 1424, 2423
Bpu10I CCTNAGC 3 cut(s) 910, 1554, 1600
Bpu14I TTCGAA 1 cut(s) 377
BpuEI CTTGAG 4 cut(s) 705, 1057, 2190, 2817
BpuMI CCSGG 1 cut(s) 2748
Bsa29I ATCGAT 2 cut(s) 68, 1584
BsaAI YACGTR 1 cut(s) 2051
BsaHI GRCGYC 6 cut(s) 5, 776, 1002, 1612, 2361, 2823
BsaI GGTCTC 2 cut(s) 1183, 2443
BsaJI CCNNGG 4 cut(s) 1009, 1390, 1414, 2438
BsaWI WCCGGW 3 cut(s) 463, 1274, 1928
Bsc4I CCNNNNNNNGG 3 cut(s) 1391, 1421, 1452
Bse118I RCCGGY 1 cut(s) 1274
Bse1I ACTGG 4 cut(s) 178, 1642, 1944, 2522
Bse21I CCTNAGG 1 cut(s) 2606
Bse3DI GCAATG 1 cut(s) 1446
BseAI TCCGGA 2 cut(s) 463, 1928
BseBI CCWGG 5 cut(s) 663, 1416, 1788, 1920, 2402
BseCI ATCGAT 2 cut(s) 68, 1584
BseDI CCNNGG 4 cut(s) 1009, 1390, 1414, 2438
BseGI GGATG 3 cut(s) 1568, 1928, 2545
BseLI CCNNNNNNNGG 3 cut(s) 1391, 1421, 1452
BseMI GCAATG 1 cut(s) 1446
BseMII CTCAG 6 cut(s) 924, 1253, 1650, 2468, 2620, 2723
BseNI ACTGG 4 cut(s) 178, 1642, 1944, 2522
BseRI GAGGAG 4 cut(s) 515, 2594, 2618, 2697
BseXI GCAGC 6 cut(s) 199, 570, 862, 890, 1948, 2287
BseYI CCCAGC 1 cut(s) 850
Bsh1236I CGCG 3 cut(s) 83, 104, 2172
Bsh1285I CGRYCG 2 cut(s) 146, 2170
BshFI GGCC 3 cut(s) 481, 967, 1658
BshNI GGYRCC 2 cut(s) 326, 1742
BshTI ACCGGT 1 cut(s) 1274
BshVI ATCGAT 2 cut(s) 68, 1584
BsiEI CGRYCG 2 cut(s) 146, 2170
BsiHKAI GWGCWC 1 cut(s) 130
BsiSI CCGG 7 cut(s) 189, 464, 1275, 1929, 2747, 2779, 2790
BslFI GGGAC 5 cut(s) 1395, 1803, 2082, 2478, 2750
BslI CCNNNNNNNGG 3 cut(s) 1391, 1421, 1452
BsmAI GTCTC 5 cut(s) 188, 386, 1183, 2208, 2443
BsmBI CGTCTC 1 cut(s) 188
BsmFI GGGAC 5 cut(s) 1395, 1803, 2082, 2478, 2750
BsmI GAATGC 1 cut(s) 2152
BsnI GGCC 3 cut(s) 481, 967, 1658
Bso31I GGTCTC 2 cut(s) 1183, 2443
Bsp119I TTCGAA 1 cut(s) 377
Bsp1286I GDGCHC 1 cut(s) 130
Bsp13I TCCGGA 2 cut(s) 463, 1928
Bsp1407I TGTACA 1 cut(s) 1647
Bsp143I GATC 8 cut(s) 65, 646, 1487, 1537, 1798, 2167, 2313, 2486
Bsp19I CCATGG 2 cut(s) 1390, 2438
BspANI GGCC 3 cut(s) 481, 967, 1658
BspCNI CTCAG 6 cut(s) 923, 1252, 1649, 2467, 2619, 2722
BspDI ATCGAT 2 cut(s) 68, 1584
BspEI TCCGGA 2 cut(s) 463, 1928
BspFNI CGCG 3 cut(s) 83, 104, 2172
BspHI TCATGA 1 cut(s) 1149
BspLI GGNNCC 8 cut(s) 264, 328, 747, 1410, 1411, 1744, 2399, 2466
BspMAI CTGCAG 2 cut(s) 880, 2305
BspOI GCTAGC 1 cut(s) 2375
BspPI GGATC 2 cut(s) 1495, 2494
BspQI GCTCTTC 3 cut(s) 732, 1782, 2290
BspT104I TTCGAA 1 cut(s) 377
BspT107I GGYRCC 2 cut(s) 326, 1742
BspTI CTTAAG 1 cut(s) 650
BspTNI GGTCTC 2 cut(s) 1183, 2443
BsrBI CCGCTC 2 cut(s) 2161, 2624
BsrDI GCAATG 1 cut(s) 1446
BsrFI RCCGGY 1 cut(s) 1274
BsrGI TGTACA 1 cut(s) 1647
BsrI ACTGG 4 cut(s) 178, 1642, 1944, 2522
BssAI RCCGGY 1 cut(s) 1274
BssECI CCNNGG 4 cut(s) 1009, 1390, 1414, 2438
BssMI GATC 8 cut(s) 65, 646, 1487, 1537, 1798, 2167, 2313, 2486
BssNI GRCGYC 6 cut(s) 5, 776, 1002, 1612, 2361, 2823
BssSI CACGAG 2 cut(s) 1257, 2187
BssT1I CCWWGG 3 cut(s) 1009, 1390, 2438
Bst2BI CACGAG 2 cut(s) 1257, 2187
Bst2UI CCWGG 5 cut(s) 663, 1416, 1788, 1920, 2402
Bst6I CTCTTC 5 cut(s) 402, 492, 732, 1782, 2290
BstACI GRCGYC 6 cut(s) 5, 776, 1002, 1612, 2361, 2823
BstAFI CTTAAG 1 cut(s) 650
BstAPI GCANNNNNTGC 1 cut(s) 872
BstAUI TGTACA 1 cut(s) 1647
BstBAI YACGTR 1 cut(s) 2051
BstBI TTCGAA 1 cut(s) 377
BstC8I GCNNGC 2 cut(s) 1864, 2373
BstDSI CCRYGG 2 cut(s) 1390, 2438
BstF5I GGATG 3 cut(s) 1568, 1928, 2545
BstFNI CGCG 3 cut(s) 83, 104, 2172
BstKTI GATC 8 cut(s) 68, 649, 1490, 1540, 1801, 2170, 2316, 2489
BstMAI GTCTC 5 cut(s) 188, 386, 1183, 2208, 2443
BstMBI GATC 8 cut(s) 65, 646, 1487, 1537, 1798, 2167, 2313, 2486
BstMCI CGRYCG 2 cut(s) 146, 2170
BstMWI GCNNNNNNNGC 8 cut(s) 344, 872, 881, 920, 1295, 1457, 1940, 1970
BstNI CCWGG 5 cut(s) 663, 1416, 1788, 1920, 2402
BstNSI RCATGY 1 cut(s) 2245
BstSCI CCNGG 6 cut(s) 661, 1414, 1786, 1918, 2400, 2746
BstSFI CTRYAG 6 cut(s) 9, 628, 876, 948, 969, 2301
BstUI CGCG 3 cut(s) 83, 104, 2172
BstV1I GCAGC 6 cut(s) 199, 570, 862, 890, 1948, 2287
BstV2I GAAGAC 5 cut(s) 813, 997, 2246, 2267, 2747
BstX2I RGATCY 3 cut(s) 1487, 1537, 2486
BstXI CCANNNNNNTGG 1 cut(s) 2439
BstYI RGATCY 3 cut(s) 1487, 1537, 2486
Bsu15I ATCGAT 2 cut(s) 68, 1584
Bsu36I CCTNAGG 1 cut(s) 2606
BsuRI GGCC 3 cut(s) 481, 967, 1658
BsuTUI ATCGAT 2 cut(s) 68, 1584
BtgI CCRYGG 2 cut(s) 1390, 2438
BtsCI GGATG 3 cut(s) 1568, 1928, 2545
BtsIMutI CAGTG 4 cut(s) 1178, 2034, 2087, 2198
Cac8I GCNNGC 2 cut(s) 1864, 2373
CaiI CAGNNNCTG 2 cut(s) 1490, 2200
CciI TCATGA 1 cut(s) 1149
Cfr10I RCCGGY 1 cut(s) 1274
Cfr13I GGNCC 7 cut(s) 479, 746, 1409, 1926, 2026, 2042, 2465
ClaI ATCGAT 2 cut(s) 68, 1584
CseI GACGC 5 cut(s) 128, 807, 991, 2027, 2369
Csp6I GTAC 6 cut(s) 33, 442, 754, 1342, 1466, 1648
CspAI ACCGGT 1 cut(s) 1274
CviQI GTAC 6 cut(s) 33, 442, 754, 1342, 1466, 1648
DpnI GATC 8 cut(s) 67, 648, 1489, 1539, 1800, 2169, 2315, 2488
DpnII GATC 8 cut(s) 65, 646, 1487, 1537, 1798, 2167, 2313, 2486
DraI TTTAAA 1 cut(s) 1546
DrdI GACNNNNNNGTC 1 cut(s) 2076
DseDI GACNNNNNNGTC 1 cut(s) 2076
EaeI YGGCCR 1 cut(s) 1656
Eam1104I CTCTTC 5 cut(s) 402, 492, 732, 1782, 2290
EarI CTCTTC 5 cut(s) 402, 492, 732, 1782, 2290
EciI GGCGGA 1 cut(s) 812
Ecl136II GAGCTC 1 cut(s) 128
Eco130I CCWWGG 3 cut(s) 1009, 1390, 2438
Eco24I GRGCYC 1 cut(s) 130
Eco31I GGTCTC 2 cut(s) 1183, 2443
Eco47I GGWCC 6 cut(s) 746, 1409, 1926, 2026, 2042, 2465
Eco53kI GAGCTC 1 cut(s) 128
Eco57I CTGAAG 5 cut(s) 320, 513, 1871, 2121, 2261
Eco81I CCTNAGG 1 cut(s) 2606
EcoICRI GAGCTC 1 cut(s) 128
EcoO109I RGGNCCY 1 cut(s) 1409
EcoRI GAATTC 1 cut(s) 1493
EcoRII CCWGG 5 cut(s) 661, 1414, 1786, 1918, 2400
EcoT14I CCWWGG 3 cut(s) 1009, 1390, 2438
EcoT38I GRGCYC 1 cut(s) 130
ErhI CCWWGG 3 cut(s) 1009, 1390, 2438
Esp3I CGTCTC 1 cut(s) 188
FalI AAGNNNNNCTT 4 cut(s) 438, 470, 2743, 2775
FaqI GGGAC 5 cut(s) 1395, 1803, 2082, 2478, 2750
FauI CCCGC 1 cut(s) 1444
FauNDI CATATG 1 cut(s) 2393
FokI GGATG 3 cut(s) 1555, 1935, 2552
FriOI GRGCYC 1 cut(s) 130
FspBI CTAG 5 cut(s) 183, 231, 252, 930, 2372
GsaI CCCAGC 1 cut(s) 854
GsuI CTGGAG 4 cut(s) 684, 1139, 1424, 2423
HaeIII GGCC 3 cut(s) 481, 967, 1658
HapII CCGG 7 cut(s) 189, 464, 1275, 1929, 2747, 2779, 2790
HgaI GACGC 5 cut(s) 128, 807, 991, 2027, 2369
Hin1I GRCGYC 6 cut(s) 5, 776, 1002, 1612, 2361, 2823
HincII GTYRAC 2 cut(s) 1891, 2527
HindII GTYRAC 2 cut(s) 1891, 2527
HindIII AAGCTT 2 cut(s) 452, 701
HpaI GTTAAC 1 cut(s) 2527
HpaII CCGG 7 cut(s) 189, 464, 1275, 1929, 2747, 2779, 2790
HphI GGTGA 3 cut(s) 293, 871, 2428
Hpy166II GTNNAC 6 cut(s) 150, 1466, 1561, 1891, 2026, 2527
Hpy8I GTNNAC 6 cut(s) 150, 1466, 1561, 1891, 2026, 2527
Hpy99I CGWCG 7 cut(s) 144, 343, 1502, 1614, 2021, 2516, 2825
HpyAV CCTTC 4 cut(s) 235, 295, 589, 2477
HpyCH4IV ACGT 5 cut(s) 776, 1612, 1783, 2050, 2823
HpyCH4V TGCA 7 cut(s) 878, 923, 1298, 1439, 1907, 2150, 2303
HpyF10VI GCNNNNNNNGC 8 cut(s) 344, 872, 881, 920, 1295, 1457, 1940, 1970
HpySE526I ACGT 5 cut(s) 776, 1612, 1783, 2050, 2823
Hsp92I GRCGYC 6 cut(s) 5, 776, 1002, 1612, 2361, 2823
KflI GGGWCCC 1 cut(s) 1409
Kpn2I TCCGGA 2 cut(s) 463, 1928
KspAI GTTAAC 1 cut(s) 2527
Kzo9I GATC 8 cut(s) 65, 646, 1487, 1537, 1798, 2167, 2313, 2486
LguI GCTCTTC 3 cut(s) 732, 1782, 2290
LmnI GCTCC 4 cut(s) 133, 191, 466, 1931
Lsp1109I GCAGC 6 cut(s) 199, 570, 862, 890, 1948, 2287
LweI GCATC 5 cut(s) 1074, 1113, 1118, 1585, 2348
MaeI CTAG 5 cut(s) 183, 231, 252, 930, 2372
MaeII ACGT 5 cut(s) 776, 1612, 1783, 2050, 2823
MaeIII GTNAC 7 cut(s) 226, 269, 859, 925, 943, 1182, 1910
MalI GATC 8 cut(s) 67, 648, 1489, 1539, 1800, 2169, 2315, 2488
MbiI CCGCTC 2 cut(s) 2161, 2624
MboI GATC 8 cut(s) 65, 646, 1487, 1537, 1798, 2167, 2313, 2486
MflI RGATCY 3 cut(s) 1487, 1537, 2486
MhlI GDGCHC 1 cut(s) 130
MlyI GAGTC 6 cut(s) 419, 675, 1821, 2025, 2243, 2707
MmeI TCCRAC 7 cut(s) 691, 766, 874, 1492, 1860, 2069, 2086
MroI TCCGGA 2 cut(s) 463, 1928
MslI CAYNNNNRTG 2 cut(s) 1154, 2437
MspA1I CMGCKG 1 cut(s) 914
MspCI CTTAAG 1 cut(s) 650
MspI CCGG 7 cut(s) 189, 464, 1275, 1929, 2747, 2779, 2790
MspR9I CCNGG 6 cut(s) 663, 1416, 1788, 1920, 2402, 2748
Mva1269I GAATGC 1 cut(s) 2152
MvaI CCWGG 5 cut(s) 663, 1416, 1788, 1920, 2402
MvnI CGCG 3 cut(s) 83, 104, 2172
MwoI GCNNNNNNNGC 8 cut(s) 344, 872, 881, 920, 1295, 1457, 1940, 1970
NciI CCSGG 1 cut(s) 2748
NcoI CCATGG 2 cut(s) 1390, 2438
NdeI CATATG 1 cut(s) 2393
NdeII GATC 8 cut(s) 65, 646, 1487, 1537, 1798, 2167, 2313, 2486
NheI GCTAGC 1 cut(s) 2371
NlaIV GGNNCC 8 cut(s) 264, 328, 747, 1410, 1411, 1744, 2399, 2466
NmuCI GTSAC 4 cut(s) 859, 925, 943, 1182
NspI RCATGY 1 cut(s) 2245
NspV TTCGAA 1 cut(s) 377
PagI TCATGA 1 cut(s) 1149
PciI ACATGT 1 cut(s) 2241
PciSI GCTCTTC 3 cut(s) 732, 1782, 2290
PcsI WCGNNNNNNNCGW 3 cut(s) 1789, 1798, 1991
PctI GAATGC 1 cut(s) 2152
PfeI GAWTC 9 cut(s) 247, 374, 658, 900, 1351, 1855, 1883, 1996, 2786
PflFI GACNNNGTC 3 cut(s) 2200, 2510, 2798
PfoI TCCNGGA 2 cut(s) 661, 2746
PinAI ACCGGT 1 cut(s) 1274
Ple19I CGATCG 1 cut(s) 2170
PleI GAGTC 6 cut(s) 418, 674, 1820, 2025, 2242, 2707
PpsI GAGTC 6 cut(s) 418, 674, 1820, 2025, 2242, 2707
Ppu21I YACGTR 1 cut(s) 2051
PpuMI RGGWCCY 1 cut(s) 1409
PscI ACATGT 1 cut(s) 2241
Psp124BI GAGCTC 1 cut(s) 130
Psp5II RGGWCCY 1 cut(s) 1409
Psp6I CCWGG 5 cut(s) 661, 1414, 1786, 1918, 2400
PspFI CCCAGC 1 cut(s) 850
PspGI CCWGG 5 cut(s) 661, 1414, 1786, 1918, 2400
PspN4I GGNNCC 8 cut(s) 264, 328, 747, 1410, 1411, 1744, 2399, 2466
PspPI GGNCC 7 cut(s) 479, 746, 1409, 1926, 2026, 2042, 2465
PspPPI RGGWCCY 1 cut(s) 1409
PstI CTGCAG 2 cut(s) 880, 2305
PstNI CAGNNNCTG 2 cut(s) 1490, 2200
PsuI RGATCY 3 cut(s) 1487, 1537, 2486
PsyI GACNNNGTC 3 cut(s) 2200, 2510, 2798
PvuI CGATCG 1 cut(s) 2170
PvuII CAGCTG 1 cut(s) 914
RgaI GCGATCGC 1 cut(s) 2170
RsaI GTAC 6 cut(s) 34, 443, 755, 1343, 1467, 1649
RsaNI GTAC 6 cut(s) 33, 442, 754, 1342, 1466, 1648
RseI CAYNNNNRTG 2 cut(s) 1154, 2437
SacI GAGCTC 1 cut(s) 130
SapI GCTCTTC 3 cut(s) 732, 1782, 2290
Sau3AI GATC 8 cut(s) 65, 646, 1487, 1537, 1798, 2167, 2313, 2486
Sau96I GGNCC 7 cut(s) 479, 746, 1409, 1926, 2026, 2042, 2465
ScaI AGTACT 1 cut(s) 1343
SchI GAGTC 6 cut(s) 419, 675, 1821, 2025, 2243, 2707
ScrFI CCNGG 6 cut(s) 663, 1416, 1788, 1920, 2402, 2748
SduI GDGCHC 1 cut(s) 130
SfaAI GCGATCGC 1 cut(s) 2170
SfaNI GCATC 5 cut(s) 1074, 1113, 1118, 1585, 2348
SfcI CTRYAG 6 cut(s) 9, 628, 876, 948, 969, 2301
SfuI TTCGAA 1 cut(s) 377
SgfI GCGATCGC 1 cut(s) 2170
SinI GGWCC 6 cut(s) 746, 1409, 1926, 2026, 2042, 2465
SmiMI CAYNNNNRTG 2 cut(s) 1154, 2437
SmlI CTYRAG 5 cut(s) 650, 720, 1072, 2205, 2832
SmoI CTYRAG 5 cut(s) 650, 720, 1072, 2205, 2832
SpeI ACTAGT 1 cut(s) 929
SspMI CTAG 5 cut(s) 183, 231, 252, 930, 2372
SstI GAGCTC 1 cut(s) 130
StyD4I CCNGG 6 cut(s) 661, 1414, 1786, 1918, 2400, 2746
StyI CCWWGG 3 cut(s) 1009, 1390, 2438
TaiI ACGT 5 cut(s) 779, 1615, 1786, 2053, 2826
TaqII GACCGA 2 cut(s) 132, 2043
TatI WGTACW 3 cut(s) 441, 1341, 1647
TauI GCSGC 4 cut(s) 338, 884, 1658, 2521
TfiI GAWTC 9 cut(s) 247, 374, 658, 900, 1351, 1855, 1883, 1996, 2786
TscAI CASTG 4 cut(s) 1185, 2041, 2087, 2205
TseFI GTSAC 4 cut(s) 859, 925, 943, 1182
TseI GCWGC 6 cut(s) 212, 583, 875, 878, 1961, 2300
Tsp45I GTSAC 4 cut(s) 859, 925, 943, 1182
TspGWI ACGGA 4 cut(s) 1201, 1561, 1805, 2706
TspRI CASTG 4 cut(s) 1185, 2041, 2087, 2205
Tth111I GACNNNGTC 3 cut(s) 2200, 2510, 2798
Vha464I CTTAAG 1 cut(s) 650
VpaK11BI GGWCC 6 cut(s) 746, 1409, 1926, 2026, 2042, 2465
XapI RAATTY 4 cut(s) 353, 1283, 1493, 2722
XceI RCATGY 1 cut(s) 2245
XcmI CCANNNNNNNNNTGG 1 cut(s) 2398
XspI CTAG 5 cut(s) 183, 231, 252, 930, 2372
ZraI GACGTC 3 cut(s) 777, 1613, 2824
ZrmI AGTACT 1 cut(s) 1343
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.