Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0011834

Physical Location & Seq

Genomic Coordinates Forward (+)

2901844 .. 2907179

Gene Structure 5336 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g04870.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2802 bp

ATGGCATCCATTGACATTCTAAACTCACCCAGGCTTCACATTCCCAATCCTCACAGCCACTTCAGATCCCTAGCTCACTCAAGGCACCTCAATTTGATAACAAGGCTCCGAAAGCAGCCACCTTTCCCTCGCCGGTCACTCACCGTCCTCTGCTCAAAGTCCGGTGACGCTAGCAAAGCTTCCGGGGATGATTTTATGACCAGGGTTTTGAAGGAGAACCCAAGCCAGGTTGAACCCAGGTTCTTAATTGGTGAAAAGTTTTATACTTTGAAGGAAAAAGAGAGTTTAGGGAAGAAACCCAATGTGGGTTTTGCTGAGTTCTTGGCAAAGAGGTTGACTTTCAAGAAGGCAGAAGAAGATGTGAAGAAACAGAGGAATGAGGAGGAGGGTGTGTTTTTGAATGATATTTTGAGGGAGTACAAGGGGAAGCTCTATGTGCCTGAGCAGATTTTCGGAGCCGAGTTGCCGGAGGAGGATGAGTTTGAGAAGAGTTCGGAGGAATTGCCCAAGATGAGCTTTGAGGATTTTCAGAAGGCTATGAAGAATGATAAGGTTGAGTTGTTGAGTTATAAGGAAGTTAAGGGTGGTGCTTATGGGTTTAGTGATTTTGTTGTTGACTTGAAGGAGATCCCAGGAGAGAAGAGATTGCATAGAACCAAATGGGCAATGAGGCTGGATGAGGGTGAAGCTCAGGCTCTTTTGGAGGAGTATACGGGTCCGAGATATGTGATTGAAAGACATACCACGTCTTCGGTTGGAAGCTTACCGCAGTACCCTCATCCAGTGGCGTCTTCCATATCAAGCAGAATGATGGTAGAGCTTGGAGTGGTGACAGCTCTAATGGCTGCTGCTGCAGTTGTTGTTGGAGGGTTCTTGGCTTCCGCAGTATTTGCTGTTACCAGTTTTGTGTTCGTGGCAACTGTATATGTTGTGTGGCCTATAGTCAAGCCATTTATCAGGCTTTTTCTTGGTATTCTCTTTGGTATTTTGGAGAGAGTATGGGAAAAGGTTGTTGATTTTTTCAGTGATGGAGGCATTTTCTCTAAACTATATGAATTTTACACTTTTGGTGGTGTCTCTGCCAGCCTTGAGATGTTAAAGCCAATTTCAATTGTCCTTTTGACTATGGTCCTTCTTGTCCGTTTCACACTCTCAAGAAGACCTAAGAACTTCAGGAAGTGGGATCTGTGGCAAGGGATTGATTTTTCGCGGTCTAAAGCAGAAGCTCGTGTTGATGGATCGACAGGAGTCAAGTTTGGTGATGTGGCAGGGATTGATGAAGCAGTAGAGGAACTCCAGGAGTTGGTGAAGTACTTGAAGAACCCAGAATTGTTTGATAAGATGGGAATAAAGCCTCCTCATGGGGTTCTCTTAGAGGGCCCTCCCGGATGTGGCAAGACCTTGGTGGCCAAAGCAATAGCTGGGGAGGCTGGTGTTCCATTTTACCAAATGGCAGGATCTGAGTTTGTTGAAGTTTTAGTTGGTGTTGGGTCTGCTCGTATTAGAGATCTATTCAAAAGAGCCAAGGTGAACAAACCATCAGTTATATTCATTGATGAGATTGATGCATTGGCTACCAGGCGTCAAGGGATTTTCAAGGAATCTGGCGACCAACTGTATAATGCAGCCACTCAAGAAAGGGAAACTACACTAAACCAGCTCTTAATAGAACTTGATGGGTTTGATACTGGTAAAGGTGTTATCTTCTTAGCTGCTACAAATCGCAGGGATTTGCTAGACCCTGCACTTCTGCGACCAGGTCGTTTTGATCGCAAGATTAAGATTCGTCCTCCTGGTCCAAAGGGAAGATTGGAGATTTTAAAAATCCATGCAAGCAAAGTTAAAATGTCAGAATCTGTTGATTTGTCCAGCTATGCATTGAACTTACCTGGATGGACGGGAGCAAAGTTGGCACAGCTGGTCCAAGAGGCTGCACTTGTTGCAGTAAGGAAGGGGCATGATTCAATTCTTAGGTCTGACTTGGATGATGCAGTTGATAGACTTACGGTAGGACCAAGACGGGTTGGAATCGATTTGGGTTATCAAGGACAATGCCGTCGAGCTACTACTGAAGTTGGAGTCGCATTGACATCTCACCTGCTTAGGCAATATGAGAGTGCAAAAGTTGAGTCCTGTGATCGCATTTCAATCATTCCTCGTGGCCAGACACTGTCACAAGTTGTATTTGATCGTCTTGATGATGAAGCATACATGTTTGAGCGTCGGCCACAATTGTTGCATCGCCTTCAGGTTTTACTTGGAGGGAGAGCTGCAGAAGAGGTCATATATGGACGGGACACATCAATGGCATCAGTTGACTACCTTGCTGATGCATCTTGGCTTGCGCGTAAAATCTTGACTGTTTGGAATTTGGAGAATCCAATGGTCATACATGGAGAGCCACCACCTTGGAGGAGGAAACCTAAGTTTGTAGGCCCTCGGCTGGACTTTGAGGGATCGTTGTATGATGACTATGGCCTAATTGAACCACCAGTGAACTTCAATTTAGATGATCAGGTTGCACAAAGGACTGAAGAGCTGGTACAGAGCATGTATGCAAAGACACTTTCTTTGCTTAAGCGTCATCATGCAGCTTTGCTTAAAACGGTGAAGGTTCTTCTCGAACGCAAGGAAATCAGCGGTGAAGAAATCGACTTCATACTGAAAAAGTACCCTCCCCAAACACCAGTGAAGCTTCTATTAGAGGAAGAAAACCCCGGTAGCCTCCAGTTCATGAAACAGGAAGAGAAACATGAGCTAGAGTATGCCCTTCAAACCCGACAGAAAGGCGAAACCTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004176 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006508 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0008233 GO:0008237 GO:0009507 GO:0009526 GO:0009528 GO:0009536 GO:0009657 GO:0009658 GO:0009706 GO:0009790 GO:0009791 GO:0009793 GO:0009941 GO:0009987 GO:0010020 GO:0010154 GO:0016020 GO:0016043 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0016887 GO:0017111 GO:0019538 GO:0019866 GO:0022414 GO:0031090 GO:0031967 GO:0031969 GO:0031975 GO:0032501 GO:0032502 GO:0042170 GO:0042623 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043572 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0048285 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0061458 GO:0070011 GO:0071704 GO:0071840 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AAA Peptidase_M41

Protein Analysis

934

Amino Acids

105.09

Weight (kDa)

8.4

Isoelectric Point (pI)

41.29

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
AAA	PF00004	456 - 596	1.7e-39	ATPase family associated with various cellular activities (AAA)
AAA_lid_3	PF17862	619 - 662	6.3e-07	AAA+ lid domain
Peptidase_M41	PF01434	691 - 791	6.8e-12	Peptidase family M41

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011834)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G23940
fragaria_vesca	FvH4_5g04870 FvH4_5g04870
malus_domestica	MD06G1109500.v1.1 MD14G1130500.v1.1
prunus_persica	Prupe.5G122500_v2.0.a1
pyrus_communis	pycom06g10310
rosa_chinensis	RchiOBHm_Chr7g0194221
rosa_laevigata	RLG00000004209
rosa_multiflora	Rmu_co8268851.1_g000001 Rmu_sc0000901.1_g000001 Rmu_sc0009433.1_g000015
rosa_roxburghii	Rroxscaffold_3G00261490
rosa_rugosa	Rorug07G0014400
rosa_samantha	Rh7AG141800 Rh7BG142200 Rh7CG145900 Rh7DG143200
rosa_wichuraiana	Rw7G012120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	570
AarI	CACCTGC	1 cut(s)	2106
AasI	GACNNNNNNGTC	1 cut(s)	2055
Acc36I	ACCTGC	1 cut(s)	2106
AccB1I	GGYRCC	1 cut(s)	84
AccB7I	CCANNNNNTGG	1 cut(s)	1303
AccI	GTMKAC	1 cut(s)	710
AccII	CGCG	2 cut(s)	1210, 2347
AciI	CCGC	4 cut(s)	767, 882, 1210, 2640
AclWI	GGATC	6 cut(s)	60, 622, 1191, 1246, 1465, 2464
AcoI	YGGCCR	3 cut(s)	1407, 2161, 2225
AcsI	RAATTY	2 cut(s)	1055, 2368
AcuI	CTGAAG	5 cut(s)	46, 1156, 2091, 2231, 2553
AcyI	GRCGYC	2 cut(s)	788, 1582
AfaI	GTAC	5 cut(s)	419, 773, 1313, 2544, 2672
AfiI	CCNNNNNNNGG	6 cut(s)	226, 305, 1303, 1361, 1391, 2443
AflII	CTTAAG	1 cut(s)	2576
AflIII	ACRYGT	1 cut(s)	2211
AjiI	CACGTC	1 cut(s)	747
AjuI	GAANNNNNNNTTGG	2 cut(s)	1464, 1496
Alw26I	GTCTC	1 cut(s)	1081
AlwI	GGATC	6 cut(s)	60, 622, 1191, 1246, 1465, 2464
AlwNI	CAGNNNCTG	3 cut(s)	1460, 1856, 2170
AoxI	GGCC	7 cut(s)	935, 1378, 1407, 2161, 2225, 2434, 2476
ApaI	GGGCCC	1 cut(s)	1382
ApeKI	GCWGC	9 cut(s)	115, 845, 848, 851, 1625, 1712, 1931, 2270, 2591
ApoI	RAATTY	2 cut(s)	1055, 2368
ArsI	GACNNNNNNTTYG	6 cut(s)	190, 222, 2114, 2146, 2554, 2586
AspLEI	GCGC	1 cut(s)	2347
AspS9I	GGNCC	8 cut(s)	716, 1129, 1378, 1379, 1796, 1921, 2012, 2435
AsuC2I	CCSGG	3 cut(s)	184, 1386, 2718
AsuNHI	GCTAGC	1 cut(s)	170
AvaII	GGWCC	5 cut(s)	716, 1129, 1796, 1921, 2012
BaeGI	GKGCMC	1 cut(s)	1382
BaeI	ACNNNNGTAYC	2 cut(s)	755, 788
BalI	TGGCCA	2 cut(s)	1409, 2163
BanI	GGYRCC	1 cut(s)	84
BanII	GRGCYC	1 cut(s)	1382
BarI	GAAGNNNNNNTAC	2 cut(s)	2526, 2558
BauI	CACGAG	2 cut(s)	1227, 2157
BbsI	GAAGAC	3 cut(s)	741, 783, 1165
BbvI	GCAGC	9 cut(s)	127, 832, 835, 838, 1637, 1699, 1918, 2257, 2603
BccI	CCATC	7 cut(s)	805, 1022, 1229, 1336, 1546, 1670, 1887
BceAI	ACGGC	1 cut(s)	2040
BclI	TGATCA	1 cut(s)	2512
BcnI	CCSGG	3 cut(s)	184, 1386, 2718
BcoDI	GTCTC	1 cut(s)	1081
BfaI	CTAG	4 cut(s)	71, 171, 1736, 2759
BfmI	CTRYAG	3 cut(s)	852, 939, 2271
BfrI	CTTAAG	1 cut(s)	2576
BfuAI	ACCTGC	1 cut(s)	2106
BglII	AGATCT	1 cut(s)	1507
BisI	GCNGC	9 cut(s)	116, 846, 849, 852, 1626, 1713, 1932, 2271, 2592
BlsI	GCNGC	9 cut(s)	117, 847, 850, 853, 1627, 1714, 1933, 2272, 2593
BmcAI	AGTACT	1 cut(s)	1313
Bme18I	GGWCC	5 cut(s)	716, 1129, 1796, 1921, 2012
BmgBI	CACGTC	1 cut(s)	747
BmgT120I	GGNCC	8 cut(s)	716, 1129, 1378, 1379, 1796, 1921, 2012, 2435
BmiI	GGNNCC	5 cut(s)	86, 107, 457, 717, 1380
BmsI	GCATC	7 cut(s)	14, 1555, 1978, 2248, 2318, 2320, 2342
BmtI	GCTAGC	1 cut(s)	174
BoxI	GACNNNNGTC	2 cut(s)	1127, 1247
BpiI	GAAGAC	3 cut(s)	741, 783, 1165
BpmI	CTGGAG	2 cut(s)	1280, 2711
Bpu10I	CCTNAGC	3 cut(s)	441, 690, 2102
BpuEI	CTTGAG	4 cut(s)	64, 1109, 1138, 1617
BpuMI	CCSGG	3 cut(s)	184, 1386, 2718
Bsa29I	ATCGAT	1 cut(s)	2031
BsaHI	GRCGYC	2 cut(s)	788, 1582
BsaWI	WCCGGW	1 cut(s)	161
BsaXI	ACNNNNNCTCC	4 cut(s)	377, 407, 464, 494
Bsc4I	CCNNNNNNNGG	6 cut(s)	226, 305, 1303, 1361, 1391, 2443
Bse118I	RCCGGY	1 cut(s)	132
Bse1I	ACTGG	6 cut(s)	782, 900, 1693, 2492, 2687, 2728
Bse3DI	GCAATG	1 cut(s)	672
BseCI	ATCGAT	1 cut(s)	2031
BseGI	GGATG	8 cut(s)	5, 193, 481, 682, 778, 1394, 1898, 1990
BseLI	CCNNNNNNNGG	6 cut(s)	226, 305, 1303, 1361, 1391, 2443
BseMI	GCAATG	1 cut(s)	672
BseMII	CTCAG	4 cut(s)	306, 432, 704, 1452
BseNI	ACTGG	6 cut(s)	782, 900, 1693, 2492, 2687, 2728
BseRI	GAGGAG	6 cut(s)	395, 398, 485, 719, 1347, 2428
BseSI	GKGCMC	1 cut(s)	1382
BseXI	GCAGC	9 cut(s)	127, 832, 835, 838, 1637, 1699, 1918, 2257, 2603
BseYI	CCCAGC	1 cut(s)	1421
BsgI	GTGCAG	2 cut(s)	1728, 1917
Bsh1236I	CGCG	2 cut(s)	1210, 2347
BshFI	GGCC	7 cut(s)	937, 1380, 1409, 2163, 2227, 2436, 2478
BshNI	GGYRCC	1 cut(s)	84
BshVI	ATCGAT	1 cut(s)	2031
BsiSI	CCGG	6 cut(s)	133, 162, 183, 467, 1386, 2718
BslFI	GGGAC	1 cut(s)	2309
BslI	CCNNNNNNNGG	6 cut(s)	226, 305, 1303, 1361, 1391, 2443
BsmAI	GTCTC	1 cut(s)	1081
BsmFI	GGGAC	1 cut(s)	2309
BsnI	GGCC	7 cut(s)	937, 1380, 1409, 2163, 2227, 2436, 2478
Bsp120I	GGGCCC	1 cut(s)	1378
Bsp1286I	GDGCHC	1 cut(s)	1382
BspACI	CCGC	4 cut(s)	767, 882, 1210, 2640
BspANI	GGCC	7 cut(s)	937, 1380, 1409, 2163, 2227, 2436, 2478
BspCNI	CTCAG	4 cut(s)	307, 433, 703, 1453
BspDI	ATCGAT	1 cut(s)	2031
BspFNI	CGCG	2 cut(s)	1210, 2347
BspHI	TCATGA	1 cut(s)	2733
BspLI	GGNNCC	5 cut(s)	86, 107, 457, 717, 1380
BspMAI	CTGCAG	2 cut(s)	856, 2275
BspMI	ACCTGC	1 cut(s)	2106
BspOI	GCTAGC	1 cut(s)	174
BspPI	GGATC	6 cut(s)	60, 622, 1191, 1246, 1465, 2464
BspQI	GCTCTTC	1 cut(s)	2529
BspT107I	GGYRCC	1 cut(s)	84
BspTI	CTTAAG	1 cut(s)	2576
BsrDI	GCAATG	1 cut(s)	672
BsrFI	RCCGGY	1 cut(s)	132
BsrI	ACTGG	6 cut(s)	782, 900, 1693, 2492, 2687, 2728
BssAI	RCCGGY	1 cut(s)	132
BssNAI	GTATAC	1 cut(s)	711
BssNI	GRCGYC	2 cut(s)	788, 1582
BssSI	CACGAG	2 cut(s)	1227, 2157
BssT1I	CCWWGG	3 cut(s)	1401, 1524, 2408
Bst1107I	GTATAC	1 cut(s)	711
Bst2BI	CACGAG	2 cut(s)	1227, 2157
Bst4CI	ACNGT	7 cut(s)	145, 922, 1617, 2008, 2172, 2362, 2608
Bst6I	CTCTTC	5 cut(s)	482, 635, 2271, 2529, 2739
BstACI	GRCGYC	2 cut(s)	788, 1582
BstAFI	CTTAAG	1 cut(s)	2576
BstAPI	GCANNNNNTGC	2 cut(s)	890, 1940
BstC8I	GCNNGC	4 cut(s)	172, 1084, 1834, 2343
BstF5I	GGATG	8 cut(s)	5, 193, 481, 682, 778, 1394, 1898, 1990
BstFNI	CGCG	2 cut(s)	1210, 2347
BstHHI	GCGC	1 cut(s)	2347
BstMAI	GTCTC	1 cut(s)	1081
BstMWI	GCNNNNNNNGC	9 cut(s)	112, 176, 436, 842, 851, 890, 1427, 1910, 1940
BstNSI	RCATGY	2 cut(s)	2215, 2554
BstPAI	GACNNNNGTC	2 cut(s)	1127, 1247
BstSFI	CTRYAG	3 cut(s)	852, 939, 2271
BstSLI	GKGCMC	1 cut(s)	1382
BstUI	CGCG	2 cut(s)	1210, 2347
BstV1I	GCAGC	9 cut(s)	127, 832, 835, 838, 1637, 1699, 1918, 2257, 2603
BstV2I	GAAGAC	3 cut(s)	741, 783, 1165
BstX2I	RGATCY	5 cut(s)	65, 627, 1183, 1457, 1507
BstXI	CCANNNNNNTGG	1 cut(s)	2409
BstYI	RGATCY	5 cut(s)	65, 627, 1183, 1457, 1507
BstZ17I	GTATAC	1 cut(s)	711
Bsu15I	ATCGAT	1 cut(s)	2031
BsuRI	GGCC	7 cut(s)	937, 1380, 1409, 2163, 2227, 2436, 2478
BsuTUI	ATCGAT	1 cut(s)	2031
BtgZI	GCGATG	1 cut(s)	2225
BtrI	CACGTC	1 cut(s)	747
BtsCI	GGATG	8 cut(s)	5, 193, 481, 682, 778, 1394, 1898, 1990
BtsIMutI	CAGTG	5 cut(s)	789, 1030, 2168, 2499, 2694
BveI	ACCTGC	1 cut(s)	2106
Cac8I	GCNNGC	4 cut(s)	172, 1084, 1834, 2343
CaiI	CAGNNNCTG	3 cut(s)	1460, 1856, 2170
CciI	TCATGA	1 cut(s)	2733
CfoI	GCGC	1 cut(s)	2347
Cfr10I	RCCGGY	1 cut(s)	132
Cfr13I	GGNCC	8 cut(s)	716, 1129, 1378, 1379, 1796, 1921, 2012, 2435
ClaI	ATCGAT	1 cut(s)	2031
CseI	GACGC	5 cut(s)	176, 777, 1571, 2210, 2570
CsiI	ACCWGGT	1 cut(s)	1756
Csp6I	GTAC	5 cut(s)	418, 772, 1312, 2543, 2671
CspCI	CAANNNNNGTGG	2 cut(s)	2217, 2252
CviAII	CATG	9 cut(s)	1361, 1829, 1958, 2212, 2393, 2551, 2588, 2734, 2753
CviQI	GTAC	5 cut(s)	418, 772, 1312, 2543, 2671
DraI	TTTAAA	1 cut(s)	1821
DrdI	GACNNNNNNGTC	1 cut(s)	2055
DseDI	GACNNNNNNGTC	1 cut(s)	2055
EaeI	YGGCCR	3 cut(s)	1407, 2161, 2225
Eam1104I	CTCTTC	5 cut(s)	482, 635, 2271, 2529, 2739
EarI	CTCTTC	5 cut(s)	482, 635, 2271, 2529, 2739
Eco130I	CCWWGG	3 cut(s)	1401, 1524, 2408
Eco24I	GRGCYC	1 cut(s)	1382
Eco47I	GGWCC	5 cut(s)	716, 1129, 1796, 1921, 2012
Eco57I	CTGAAG	5 cut(s)	46, 1156, 2091, 2231, 2553
EcoO109I	RGGNCCY	3 cut(s)	1378, 1379, 2435
EcoT14I	CCWWGG	3 cut(s)	1401, 1524, 2408
EcoT22I	ATGCAT	3 cut(s)	1570, 1879, 2335
EcoT38I	GRGCYC	1 cut(s)	1382
ErhI	CCWWGG	3 cut(s)	1401, 1524, 2408
FaeI	CATG	9 cut(s)	1364, 1832, 1961, 2215, 2396, 2554, 2591, 2737, 2756
FalI	AAGNNNNNCTT	2 cut(s)	500, 532
FaqI	GGGAC	1 cut(s)	2309
FatI	CATG	9 cut(s)	1360, 1828, 1957, 2211, 2392, 2550, 2587, 2733, 2752
FbaI	TGATCA	1 cut(s)	2512
FblI	GTMKAC	1 cut(s)	710
Fnu4HI	GCNGC	9 cut(s)	116, 846, 849, 852, 1626, 1713, 1932, 2271, 2592
FokI	GGATG	7 cut(s)	200, 488, 689, 765, 1401, 1905, 1997
FriOI	GRGCYC	1 cut(s)	1382
Fsp4HI	GCNGC	9 cut(s)	116, 846, 849, 852, 1626, 1713, 1932, 2271, 2592
FspBI	CTAG	4 cut(s)	71, 171, 1736, 2759
GlaI	GCGC	1 cut(s)	2346
GluI	GCNGC	9 cut(s)	116, 846, 849, 852, 1626, 1713, 1932, 2271, 2592
GsaI	CCCAGC	1 cut(s)	1425
GsuI	CTGGAG	2 cut(s)	1280, 2711
HaeIII	GGCC	7 cut(s)	937, 1380, 1409, 2163, 2227, 2436, 2478
HapII	CCGG	6 cut(s)	133, 162, 183, 467, 1386, 2718
HgaI	GACGC	5 cut(s)	176, 777, 1571, 2210, 2570
HhaI	GCGC	1 cut(s)	2347
Hin1I	GRCGYC	2 cut(s)	788, 1582
Hin1II	CATG	9 cut(s)	1364, 1832, 1961, 2215, 2396, 2554, 2591, 2737, 2756
Hin6I	GCGC	1 cut(s)	2345
HinP1I	GCGC	1 cut(s)	2345
HincII	GTYRAC	3 cut(s)	336, 616, 2317
HindII	GTYRAC	3 cut(s)	336, 616, 2317
HindIII	AAGCTT	3 cut(s)	177, 760, 2693
HinfI	GANTC	9 cut(s)	1248, 1601, 1783, 1853, 1961, 2028, 2079, 2129, 2377
HpaII	CCGG	6 cut(s)	133, 162, 183, 467, 1386, 2718
Hpy166II	GTNNAC	6 cut(s)	336, 616, 711, 1531, 2317, 2497
Hpy188I	TCNGA	9 cut(s)	65, 110, 455, 496, 531, 720, 1462, 1852, 1978
Hpy188III	TCNNGA	8 cut(s)	343, 1155, 1174, 1634, 2195, 2356, 2621, 2734
Hpy8I	GTNNAC	6 cut(s)	336, 616, 711, 1531, 2317, 2497
Hpy99I	CGWCG	2 cut(s)	2061, 2226
HpyCH4III	ACNGT	7 cut(s)	145, 922, 1617, 2008, 2172, 2362, 2608
HpyCH4IV	ACGT	1 cut(s)	746
HpyF10VI	GCNNNNNNNGC	9 cut(s)	112, 176, 436, 842, 851, 890, 1427, 1910, 1940
HpySE526I	ACGT	1 cut(s)	746
Hsp92I	GRCGYC	2 cut(s)	788, 1582
Hsp92II	CATG	9 cut(s)	1364, 1832, 1961, 2215, 2396, 2554, 2591, 2737, 2756
HspAI	GCGC	1 cut(s)	2345
Ksp22I	TGATCA	1 cut(s)	2512
LguI	GCTCTTC	1 cut(s)	2529
LmnI	GCTCC	3 cut(s)	111, 455, 1901
Lsp1109I	GCAGC	9 cut(s)	127, 832, 835, 838, 1637, 1699, 1918, 2257, 2603
LweI	GCATC	7 cut(s)	14, 1555, 1978, 2248, 2318, 2320, 2342
MabI	ACCWGGT	1 cut(s)	1756
MaeI	CTAG	4 cut(s)	71, 171, 1736, 2759
MaeII	ACGT	1 cut(s)	746
MaeIII	GTNAC	5 cut(s)	135, 164, 829, 895, 2172
MfeI	CAATTG	2 cut(s)	1110, 2231
MflI	RGATCY	5 cut(s)	65, 627, 1183, 1457, 1507
MhlI	GDGCHC	1 cut(s)	1382
MlsI	TGGCCA	2 cut(s)	1409, 2163
MluNI	TGGCCA	2 cut(s)	1409, 2163
MlyI	GAGTC	3 cut(s)	1257, 2088, 2138
MmeI	TCCRAC	4 cut(s)	736, 844, 2005, 2056
Mox20I	TGGCCA	2 cut(s)	1409, 2163
Mph1103I	ATGCAT	3 cut(s)	1570, 1879, 2335
MscI	TGGCCA	2 cut(s)	1409, 2163
MseI	TTAA	9 cut(s)	245, 579, 1097, 1664, 1779, 1820, 1842, 2577, 2601
MslI	CAYNNNNRTG	1 cut(s)	2303
Msp20I	TGGCCA	2 cut(s)	1409, 2163
MspA1I	CMGCKG	2 cut(s)	1918, 2640
MspCI	CTTAAG	1 cut(s)	2576
MspI	CCGG	6 cut(s)	133, 162, 183, 467, 1386, 2718
MunI	CAATTG	2 cut(s)	1110, 2231
MvnI	CGCG	2 cut(s)	1210, 2347
MwoI	GCNNNNNNNGC	9 cut(s)	112, 176, 436, 842, 851, 890, 1427, 1910, 1940
NciI	CCSGG	3 cut(s)	184, 1386, 2718
NheI	GCTAGC	1 cut(s)	170
NlaIII	CATG	9 cut(s)	1364, 1832, 1961, 2215, 2396, 2554, 2591, 2737, 2756
NlaIV	GGNNCC	5 cut(s)	86, 107, 457, 717, 1380
NmeAIII	GCCGAG	2 cut(s)	484, 2419
NmuCI	GTSAC	4 cut(s)	135, 164, 829, 2172
NsiI	ATGCAT	3 cut(s)	1570, 1879, 2335
NspI	RCATGY	2 cut(s)	2215, 2554
PagI	TCATGA	1 cut(s)	2733
PaqCI	CACCTGC	1 cut(s)	2106
PciI	ACATGT	1 cut(s)	2211
PciSI	GCTCTTC	1 cut(s)	2529
PfeI	GAWTC	6 cut(s)	1601, 1783, 1853, 1961, 2028, 2377
PflFI	GACNNNGTC	2 cut(s)	1758, 2170
PflMI	CCANNNNNTGG	1 cut(s)	1303
PfoI	TCCNGGA	2 cut(s)	1296, 1384
PkrI	GCNGC	9 cut(s)	117, 847, 850, 853, 1627, 1714, 1933, 2272, 2593
PleI	GAGTC	3 cut(s)	1256, 2087, 2137
PpsI	GAGTC	3 cut(s)	1256, 2087, 2137
PscI	ACATGT	1 cut(s)	2211
PshAI	GACNNNNGTC	2 cut(s)	1127, 1247
PsiI	TTATAA	1 cut(s)	570
PspFI	CCCAGC	1 cut(s)	1421
PspN4I	GGNNCC	5 cut(s)	86, 107, 457, 717, 1380
PspOMI	GGGCCC	1 cut(s)	1378
PspPI	GGNCC	8 cut(s)	716, 1129, 1378, 1379, 1796, 1921, 2012, 2435
PstI	CTGCAG	2 cut(s)	856, 2275
PstNI	CAGNNNCTG	3 cut(s)	1460, 1856, 2170
PsuI	RGATCY	5 cut(s)	65, 627, 1183, 1457, 1507
PsyI	GACNNNGTC	2 cut(s)	1758, 2170
PvuII	CAGCTG	1 cut(s)	1918
RsaI	GTAC	5 cut(s)	419, 773, 1313, 2544, 2672
RsaNI	GTAC	5 cut(s)	418, 772, 1312, 2543, 2671
RseI	CAYNNNNRTG	1 cut(s)	2303
SapI	GCTCTTC	1 cut(s)	2529
SaqAI	TTAA	9 cut(s)	245, 579, 1097, 1664, 1779, 1820, 1842, 2577, 2601
SatI	GCNGC	9 cut(s)	116, 846, 849, 852, 1626, 1713, 1932, 2271, 2592
Sau96I	GGNCC	8 cut(s)	716, 1129, 1378, 1379, 1796, 1921, 2012, 2435
ScaI	AGTACT	1 cut(s)	1313
SchI	GAGTC	3 cut(s)	1257, 2088, 2138
SduI	GDGCHC	1 cut(s)	1382
SexAI	ACCWGGT	1 cut(s)	1756
SfaNI	GCATC	7 cut(s)	14, 1555, 1978, 2248, 2318, 2320, 2342
SfcI	CTRYAG	3 cut(s)	852, 939, 2271
SinI	GGWCC	5 cut(s)	716, 1129, 1796, 1921, 2012
SmiMI	CAYNNNNRTG	1 cut(s)	2303
SmlI	CTYRAG	5 cut(s)	79, 1088, 1153, 1632, 2576
SmoI	CTYRAG	5 cut(s)	79, 1088, 1153, 1632, 2576
SsiI	CCGC	4 cut(s)	767, 882, 1210, 2640
SspMI	CTAG	4 cut(s)	71, 171, 1736, 2759
StyI	CCWWGG	3 cut(s)	1401, 1524, 2408
TaaI	ACNGT	7 cut(s)	145, 922, 1617, 2008, 2172, 2362, 2608
TaiI	ACGT	1 cut(s)	749
TaqI	TCGA	5 cut(s)	1241, 2031, 2059, 2622, 2652
TatI	WGTACW	2 cut(s)	417, 1311
TfiI	GAWTC	6 cut(s)	1601, 1783, 1853, 1961, 2028, 2377
Tru1I	TTAA	9 cut(s)	245, 579, 1097, 1664, 1779, 1820, 1842, 2577, 2601
Tru9I	TTAA	9 cut(s)	245, 579, 1097, 1664, 1779, 1820, 1842, 2577, 2601
TscAI	CASTG	5 cut(s)	789, 1030, 2175, 2499, 2694
TseFI	GTSAC	4 cut(s)	135, 164, 829, 2172
TseI	GCWGC	9 cut(s)	115, 845, 848, 851, 1625, 1712, 1931, 2270, 2591
Tsp45I	GTSAC	4 cut(s)	135, 164, 829, 2172
TspDTI	ATGAA	8 cut(s)	554, 1068, 1293, 1540, 2217, 2647, 2722, 2750
TspGWI	ACGGA	1 cut(s)	1130
TspRI	CASTG	5 cut(s)	789, 1030, 2175, 2499, 2694
Tth111I	GACNNNGTC	2 cut(s)	1758, 2170
Van91I	CCANNNNNTGG	1 cut(s)	1303
Vha464I	CTTAAG	1 cut(s)	2576
VpaK11BI	GGWCC	5 cut(s)	716, 1129, 1796, 1921, 2012
XapI	RAATTY	2 cut(s)	1055, 2368
XceI	RCATGY	2 cut(s)	2215, 2554
XmiI	GTMKAC	1 cut(s)	710
XspI	CTAG	4 cut(s)	71, 171, 1736, 2759
ZrmI	AGTACT	1 cut(s)	1313
Zsp2I	ATGCAT	3 cut(s)	1570, 1879, 2335

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.