AT4G26455

WPP domain-interacting protein

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
4
Physical Location & Seq
Forward (+)
13365283 .. 13367531
2249 bp
Loading structure...
UTR
Exon/CDS
Intron
AT4G26455.1

Sequence Viewer

Length: 1470 bp
ATGGATTTGGAGAGTGAAAGCTCTGCACTTGAGTCTGTTGATGATAATGTTTTGATTCAACAAAGTGCCAGCAACGTTTGTGATGATGGTAGGAGTTTGGATAACGGGTCTTGCTCTGATGAGAGTGTGAAACTGCTTTCGACTTCTAATTCTGTTGAACTCGGTAAACCTATGAGTTTTGATTCACCAGGTGATGGTGGTGGTGCTTATTCTCCGGTTTTGAAAGGACAAGGCTTGAGAAAATGGAGGAGGATTAGGAGAGATCTTGTTAAGGACACGTCTGCGAATATGGAGAATAGTAAAGCTCTGAAGAGAGGGTTGTCAGGTGTTGCTCATTCACATGGTAAACAGATGCAGTTTCAGTCACCGGAAGTTGAACAAGAGAGTCAGGGATCTGTTGGGTCTGTTAATATGTTGAAAAGTAGCGGTGATGGTTTTGATATACTTGGGAGTAGTGGTTACGATTCTAGGTTTGTGGCAGGGGTTGGTTTTTCAGCTGGTATGGATTTAGAGATAGATGATGATCGGAGTAGTAAGTCTTCCACGGTTGCAAGAGCTCCCAAGGTTATTAGGTATGAGAAGCCAATGATTAGTTCAGGTCAGGGAGGAAACATTCGTGTAGAGAATAGTAAGAAACATAGAGGAGAAAGTGTCGATTTCGAGAAGGAAAACTCTTATTCCAGCTTGGAATCTGACTCAAGAAAGCAGAGTGGAAGAATGATGGACTACAATGGTGAAAATGGGGAAACGTCAATGAGAAAAGATGATGCGGGAGGAGAAGGCGGAGAGTCGATAAACACGGACAATCGTTACTCAGATGAAATGGATCCATTAACAGAGGCCATCAACGGTTTCTTGGCCTTGCAAGATGCTCTTGAAAAAGAGGTTCAGCAATTCCAGGAGATCGGGAATGAACCAATGCCACAGCATCATGAACAAGTCAGCGAAGCAAATTCACCTCACCCCGAGATTGTAACCCTGGTAAACAATGTTGAACAACTGGAGAACATGCTAGAAGAAACAAGGTCCATGCTTGAGGTGAAAGAATCACACATCCGTGACCTTGAATCCACCACGAACCAAAGCAAACACTCGTGGGGAGGAACAGAGATTGTGGTTGAAGACATCTTCCGGCAGAAGATTGAGGCCGAGATTGAATATCTGATATATTCAAGATCTATCGATAACTTAAACAGTCAGATGAAGTTAATTGATGAACAAGAGTCATTGGCAGAAGAGCAAACCCATGAGACGCTGAATAAGCTAGGAAGAGTACAAACGAAGGCTGCAAATTTTACAAACAGAGCTCAAGACCTGCAAAACGATTGCATAGAAATCACCGGGACCATCAAGAAGAGAGCATGTAAGATCACTTCATACGTTCTTATACAGTTAGTATTGCTGTCAACAGTAGTTTTGTTGCTCCTGTCTCAATTGTTGCCGGAGCCAGATACTGTTGTACCCACATGA

Protein Analysis

489

Amino Acids

53.9

Weight (kDa)

4.73

Isoelectric Point (pI)

51.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1323
AccB7I CCANNNNNTGG 1 cut(s) 194
AciI CCGC 3 cut(s) 426, 770, 783
AclI AACGTT 1 cut(s) 75
AclWI GGATC 3 cut(s) 400, 821, 834
AcsI RAATTY 2 cut(s) 952, 1291
AcuI CTGAAG 1 cut(s) 329
AdeI CACNNNGTG 1 cut(s) 191
AfaI GTAC 2 cut(s) 1275, 1461
AfiI CCNNNNNNNGG 1 cut(s) 194
AflIII ACRYGT 1 cut(s) 276
AjiI CACGTC 1 cut(s) 279
AjnI CCWGG 3 cut(s) 187, 897, 978
AjuI GAANNNNNNNTTGG 2 cut(s) 577, 609
AleI CACNNNNGTG 1 cut(s) 1056
AluBI AGCT 7 cut(s) 21, 305, 497, 557, 684, 1264, 1307
AluI AGCT 7 cut(s) 21, 305, 497, 557, 684, 1264, 1307
Alw21I GWGCWC 2 cut(s) 559, 1309
Alw26I GTCTC 2 cut(s) 1244, 1434
AlwI GGATC 3 cut(s) 400, 821, 834
AlwNI CAGNNNCTG 1 cut(s) 1454
Ama87I CYCGRG 1 cut(s) 965
AoxI GGCC 3 cut(s) 840, 858, 1146
ApeKI GCWGC 1 cut(s) 1286
ApoI RAATTY 2 cut(s) 952, 1291
AspS9I GGNCC 2 cut(s) 1026, 1344
AsuC2I CCSGG 1 cut(s) 1342
AsuHPI GGTGA 9 cut(s) 177, 203, 357, 440, 746, 948, 953, 1051, 1330
AvaI CYCGRG 1 cut(s) 965
AvaII GGWCC 2 cut(s) 1026, 1344
BaeI ACNNNNGTAYC 2 cut(s) 1443, 1443
BamHI GGATCC 1 cut(s) 826
BanII GRGCYC 2 cut(s) 559, 1309
BarI GAAGNNNNNNTAC 4 cut(s) 523, 555, 1357, 1389
BauI CACGAG 1 cut(s) 1093
BbsI GAAGAC 2 cut(s) 531, 1128
Bbv12I GWGCWC 2 cut(s) 559, 1309
BbvI GCAGC 1 cut(s) 1273
BccI CCATC 6 cut(s) 80, 188, 425, 715, 851, 1355
BciT130I CCWGG 3 cut(s) 189, 899, 980
BcnI CCSGG 1 cut(s) 1342
BcoDI GTCTC 2 cut(s) 1244, 1434
BfaI CTAG 3 cut(s) 468, 1013, 1265
BfuAI ACCTGC 1 cut(s) 1323
BglII AGATCT 2 cut(s) 262, 1175
BisI GCNGC 1 cut(s) 1287
BlsI GCNGC 1 cut(s) 1288
Bme1390I CCNGG 4 cut(s) 189, 899, 980, 1342
Bme18I GGWCC 2 cut(s) 1026, 1344
BmeT110I CYCGRG 1 cut(s) 965
BmgBI CACGTC 1 cut(s) 279
BmgT120I GGNCC 2 cut(s) 1026, 1344
BmiI GGNNCC 3 cut(s) 828, 1345, 1446
BmrFI CCNGG 4 cut(s) 189, 899, 980, 1342
BmsI GCATC 4 cut(s) 342, 757, 859, 937
BpiI GAAGAC 2 cut(s) 531, 1128
BpmI CTGGAG 1 cut(s) 1022
BpuEI CTTGAG 5 cut(s) 50, 256, 682, 1055, 1293
BpuMI CCSGG 1 cut(s) 1342
Bsa29I ATCGAT 1 cut(s) 1182
BsaBI GATNNNNATC 1 cut(s) 522
BsaJI CCNNGG 3 cut(s) 543, 561, 978
BsaWI WCCGGW 2 cut(s) 214, 367
BsaXI ACNNNNNCTCC 4 cut(s) 442, 472, 636, 666
Bsc4I CCNNNNNNNGG 1 cut(s) 194
Bse1I ACTGG 1 cut(s) 1005
Bse8I GATNNNNATC 1 cut(s) 522
BseBI CCWGG 3 cut(s) 189, 899, 980
BseCI ATCGAT 1 cut(s) 1182
BseDI CCNNGG 3 cut(s) 543, 561, 978
BseGI GGATG 1 cut(s) 1053
BseJI GATNNNNATC 1 cut(s) 522
BseLI CCNNNNNNNGG 1 cut(s) 194
BseMII CTCAG 1 cut(s) 828
BseNI ACTGG 1 cut(s) 1005
BseRI GAGGAG 3 cut(s) 262, 657, 789
BseXI GCAGC 1 cut(s) 1273
BsgI GTGCAG 1 cut(s) 9
BshFI GGCC 3 cut(s) 842, 860, 1148
BshVI ATCGAT 1 cut(s) 1182
BsiHKAI GWGCWC 2 cut(s) 559, 1309
BsiHKCI CYCGRG 1 cut(s) 965
BsiSI CCGG 5 cut(s) 215, 368, 1132, 1341, 1442
BslFI GGGAC 1 cut(s) 1357
BslI CCNNNNNNNGG 1 cut(s) 194
BsmAI GTCTC 2 cut(s) 1244, 1434
BsmBI CGTCTC 1 cut(s) 1244
BsmFI GGGAC 1 cut(s) 1357
BsnI GGCC 3 cut(s) 842, 860, 1148
BsoBI CYCGRG 1 cut(s) 965
Bsp1286I GDGCHC 2 cut(s) 559, 1309
Bsp143I GATC 7 cut(s) 262, 392, 523, 826, 903, 1175, 1368
BspACI CCGC 3 cut(s) 426, 770, 783
BspANI GGCC 3 cut(s) 842, 860, 1148
BspCNI CTCAG 1 cut(s) 827
BspDI ATCGAT 1 cut(s) 1182
BspHI TCATGA 1 cut(s) 931
BspLI GGNNCC 3 cut(s) 828, 1345, 1446
BspMI ACCTGC 1 cut(s) 1323
BspPI GGATC 3 cut(s) 400, 821, 834
BspQI GCTCTTC 1 cut(s) 1230
BsrI ACTGG 1 cut(s) 1005
BssECI CCNNGG 3 cut(s) 543, 561, 978
BssMI GATC 7 cut(s) 262, 392, 523, 826, 903, 1175, 1368
BssSI CACGAG 1 cut(s) 1093
BssT1I CCWWGG 1 cut(s) 561
Bst2BI CACGAG 1 cut(s) 1093
Bst2UI CCWGG 3 cut(s) 189, 899, 980
Bst4CI ACNGT 6 cut(s) 547, 851, 1196, 1392, 1411, 1456
Bst6I CTCTTC 4 cut(s) 305, 1230, 1264, 1349
BstC8I GCNNGC 1 cut(s) 70
BstDEI CTNAG 1 cut(s) 814
BstDSI CCRYGG 1 cut(s) 543
BstF5I GGATG 1 cut(s) 1053
BstKTI GATC 7 cut(s) 265, 395, 526, 829, 906, 1178, 1371
BstMAI GTCTC 2 cut(s) 1244, 1434
BstMBI GATC 7 cut(s) 262, 392, 523, 826, 903, 1175, 1368
BstMWI GCNNNNNNNGC 1 cut(s) 1261
BstNI CCWGG 3 cut(s) 189, 899, 980
BstNSI RCATGY 2 cut(s) 1012, 1365
BstSCI CCNGG 4 cut(s) 187, 897, 978, 1340
BstV1I GCAGC 1 cut(s) 1273
BstV2I GAAGAC 2 cut(s) 531, 1128
BstX2I RGATCY 4 cut(s) 262, 392, 826, 1175
BstYI RGATCY 4 cut(s) 262, 392, 826, 1175
Bsu15I ATCGAT 1 cut(s) 1182
BsuRI GGCC 3 cut(s) 842, 860, 1148
BsuTUI ATCGAT 1 cut(s) 1182
BtgI CCRYGG 1 cut(s) 543
BtrI CACGTC 1 cut(s) 279
BtsCI GGATG 1 cut(s) 1053
BveI ACCTGC 1 cut(s) 1323
Cac8I GCNNGC 1 cut(s) 70
CaiI CAGNNNCTG 1 cut(s) 1454
CciI TCATGA 1 cut(s) 931
Cfr13I GGNCC 2 cut(s) 1026, 1344
ClaI ATCGAT 1 cut(s) 1182
CseI GACGC 1 cut(s) 1261
CsiI ACCWGGT 1 cut(s) 187
Csp6I GTAC 2 cut(s) 1274, 1460
CviAII CATG 7 cut(s) 341, 932, 1009, 1030, 1247, 1362, 1467
CviQI GTAC 2 cut(s) 1274, 1460
DdeI CTNAG 1 cut(s) 814
DpnI GATC 7 cut(s) 264, 394, 525, 828, 905, 1177, 1370
DpnII GATC 7 cut(s) 262, 392, 523, 826, 903, 1175, 1368
DraIII CACNNNGTG 1 cut(s) 191
Eam1104I CTCTTC 4 cut(s) 305, 1230, 1264, 1349
EarI CTCTTC 4 cut(s) 305, 1230, 1264, 1349
EciI GGCGGA 1 cut(s) 798
Ecl136II GAGCTC 2 cut(s) 557, 1307
Eco130I CCWWGG 1 cut(s) 561
Eco24I GRGCYC 2 cut(s) 559, 1309
Eco47I GGWCC 2 cut(s) 1026, 1344
Eco53kI GAGCTC 2 cut(s) 557, 1307
Eco57I CTGAAG 1 cut(s) 329
Eco88I CYCGRG 1 cut(s) 965
EcoICRI GAGCTC 2 cut(s) 557, 1307
EcoRII CCWGG 3 cut(s) 187, 897, 978
EcoT14I CCWWGG 1 cut(s) 561
EcoT38I GRGCYC 2 cut(s) 559, 1309
ErhI CCWWGG 1 cut(s) 561
Esp3I CGTCTC 1 cut(s) 1244
FaeI CATG 7 cut(s) 344, 935, 1012, 1033, 1250, 1365, 1470
FalI AAGNNNNNCTT 2 cut(s) 858, 890
FaqI GGGAC 1 cut(s) 1357
FatI CATG 7 cut(s) 340, 931, 1008, 1029, 1246, 1361, 1466
FauI CCCGC 1 cut(s) 763
Fnu4HI GCNGC 1 cut(s) 1287
FokI GGATG 1 cut(s) 1040
FriOI GRGCYC 2 cut(s) 559, 1309
Fsp4HI GCNGC 1 cut(s) 1287
FspBI CTAG 3 cut(s) 468, 1013, 1265
GluI GCNGC 1 cut(s) 1287
GsuI CTGGAG 1 cut(s) 1022
HaeIII GGCC 3 cut(s) 842, 860, 1148
HapII CCGG 5 cut(s) 215, 368, 1132, 1341, 1442
HgaI GACGC 1 cut(s) 1261
Hin1II CATG 7 cut(s) 344, 935, 1012, 1033, 1250, 1365, 1470
HincII GTYRAC 1 cut(s) 1407
HindII GTYRAC 1 cut(s) 1407
HpaII CCGG 5 cut(s) 215, 368, 1132, 1341, 1442
HphI GGTGA 9 cut(s) 177, 203, 357, 440, 746, 948, 953, 1051, 1330
Hpy166II GTNNAC 4 cut(s) 167, 347, 985, 1407
Hpy188I TCNGA 7 cut(s) 118, 309, 528, 694, 817, 1164, 1200
Hpy188III TCNNGA 8 cut(s) 661, 699, 875, 907, 932, 1173, 1310, 1351
Hpy8I GTNNAC 4 cut(s) 167, 347, 985, 1407
HpyAV CCTTC 3 cut(s) 658, 773, 1276
HpyCH4III ACNGT 6 cut(s) 547, 851, 1196, 1392, 1411, 1456
HpyCH4IV ACGT 4 cut(s) 75, 278, 749, 1380
HpyCH4V TGCA 7 cut(s) 26, 355, 551, 865, 1289, 1318, 1329
HpyF10VI GCNNNNNNNGC 1 cut(s) 1261
HpyF3I CTNAG 1 cut(s) 814
HpySE526I ACGT 4 cut(s) 75, 278, 749, 1380
Hsp92II CATG 7 cut(s) 344, 935, 1012, 1033, 1250, 1365, 1470
Kzo9I GATC 7 cut(s) 262, 392, 523, 826, 903, 1175, 1368
LguI GCTCTTC 1 cut(s) 1230
LmnI GCTCC 3 cut(s) 562, 1428, 1444
Lsp1109I GCAGC 1 cut(s) 1273
LweI GCATC 4 cut(s) 342, 757, 859, 937
MabI ACCWGGT 1 cut(s) 187
MaeI CTAG 3 cut(s) 468, 1013, 1265
MaeII ACGT 4 cut(s) 75, 278, 749, 1380
MaeIII GTNAC 5 cut(s) 363, 458, 809, 973, 1058
MalI GATC 7 cut(s) 264, 394, 525, 828, 905, 1177, 1370
MboI GATC 7 cut(s) 262, 392, 523, 826, 903, 1175, 1368
MfeI CAATTG 1 cut(s) 1433
MflI RGATCY 4 cut(s) 262, 392, 826, 1175
MhlI GDGCHC 2 cut(s) 559, 1309
MluCI AATT 6 cut(s) 148, 893, 952, 1209, 1291, 1433
MlyI GAGTC 5 cut(s) 41, 394, 689, 797, 1232
MseI TTAA 5 cut(s) 270, 408, 833, 1190, 1208
MslI CAYNNNNRTG 2 cut(s) 339, 1056
MspA1I CMGCKG 1 cut(s) 497
MspI CCGG 5 cut(s) 215, 368, 1132, 1341, 1442
MspR9I CCNGG 4 cut(s) 189, 899, 980, 1342
MunI CAATTG 1 cut(s) 1433
MvaI CCWGG 3 cut(s) 189, 899, 980
MwoI GCNNNNNNNGC 1 cut(s) 1261
NciI CCSGG 1 cut(s) 1342
NdeII GATC 7 cut(s) 262, 392, 523, 826, 903, 1175, 1368
NlaIII CATG 7 cut(s) 344, 935, 1012, 1033, 1250, 1365, 1470
NlaIV GGNNCC 3 cut(s) 828, 1345, 1446
NmeAIII GCCGAG 1 cut(s) 1174
NmuCI GTSAC 2 cut(s) 363, 1058
NspI RCATGY 2 cut(s) 1012, 1365
OliI CACNNNNGTG 1 cut(s) 1056
PagI TCATGA 1 cut(s) 931
PciSI GCTCTTC 1 cut(s) 1230
PfeI GAWTC 6 cut(s) 55, 182, 464, 689, 1046, 1067
PflMI CCANNNNNTGG 1 cut(s) 194
PfoI TCCNGGA 1 cut(s) 897
PkrI GCNGC 1 cut(s) 1288
PleI GAGTC 5 cut(s) 40, 393, 689, 796, 1231
PpsI GAGTC 5 cut(s) 40, 393, 689, 796, 1231
Psp124BI GAGCTC 2 cut(s) 559, 1309
Psp1406I AACGTT 1 cut(s) 75
Psp6I CCWGG 3 cut(s) 187, 897, 978
PspGI CCWGG 3 cut(s) 187, 897, 978
PspN4I GGNNCC 3 cut(s) 828, 1345, 1446
PspPI GGNCC 2 cut(s) 1026, 1344
PstNI CAGNNNCTG 1 cut(s) 1454
PsuI RGATCY 4 cut(s) 262, 392, 826, 1175
PvuII CAGCTG 1 cut(s) 497
RsaI GTAC 2 cut(s) 1275, 1461
RsaNI GTAC 2 cut(s) 1274, 1460
RseI CAYNNNNRTG 2 cut(s) 339, 1056
SacI GAGCTC 2 cut(s) 559, 1309
SapI GCTCTTC 1 cut(s) 1230
SaqAI TTAA 5 cut(s) 270, 408, 833, 1190, 1208
SatI GCNGC 1 cut(s) 1287
Sau3AI GATC 7 cut(s) 262, 392, 523, 826, 903, 1175, 1368
Sau96I GGNCC 2 cut(s) 1026, 1344
SchI GAGTC 5 cut(s) 41, 394, 689, 797, 1232
ScrFI CCNGG 4 cut(s) 189, 899, 980, 1342
SduI GDGCHC 2 cut(s) 559, 1309
SexAI ACCWGGT 1 cut(s) 187
SfaNI GCATC 4 cut(s) 342, 757, 859, 937
SinI GGWCC 2 cut(s) 1026, 1344
SmiMI CAYNNNNRTG 2 cut(s) 339, 1056
SmlI CTYRAG 5 cut(s) 29, 235, 697, 1034, 1308
SmoI CTYRAG 5 cut(s) 29, 235, 697, 1034, 1308
Sse9I AATT 6 cut(s) 148, 893, 952, 1209, 1291, 1433
SsiI CCGC 3 cut(s) 426, 770, 783
SspMI CTAG 3 cut(s) 468, 1013, 1265
SstI GAGCTC 2 cut(s) 559, 1309
StyD4I CCNGG 4 cut(s) 187, 897, 978, 1340
StyI CCWWGG 1 cut(s) 561
TaaI ACNGT 6 cut(s) 547, 851, 1196, 1392, 1411, 1456
TaiI ACGT 4 cut(s) 78, 281, 752, 1383
TaqI TCGA 5 cut(s) 140, 654, 660, 791, 1182
TasI AATT 6 cut(s) 148, 893, 952, 1209, 1291, 1433
TatI WGTACW 1 cut(s) 1273
TfiI GAWTC 6 cut(s) 55, 182, 464, 689, 1046, 1067
Tru1I TTAA 5 cut(s) 270, 408, 833, 1190, 1208
Tru9I TTAA 5 cut(s) 270, 408, 833, 1190, 1208
TseFI GTSAC 2 cut(s) 363, 1058
TseI GCWGC 1 cut(s) 1286
Tsp45I GTSAC 2 cut(s) 363, 1058
TspDTI ATGAA 6 cut(s) 834, 927, 948, 1217, 1230, 1365
TspGWI ACGGA 2 cut(s) 815, 1046
Van91I CCANNNNNTGG 1 cut(s) 194
VpaK11BI GGWCC 2 cut(s) 1026, 1344
XapI RAATTY 2 cut(s) 952, 1291
XceI RCATGY 2 cut(s) 1012, 1365
XspI CTAG 3 cut(s) 468, 1013, 1265
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.