WPP domain-interacting protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G26455 AT5G56210 |
| fragaria_vesca | FvH4_3g41590 FvH4_3g41590 |
| malus_domestica | MD03G1043100.v1.1 MD11G1046100.v1.1 |
| prunus_persica | Prupe.6G035500_v2.0.a1 Prupe.6G035500_v2.0.a1 |
| pyrus_communis | pycom03g03330 pycom11g03740 |
| rosa_chinensis | RchiOBHm_Chr5g0074601 |
| rosa_laevigata | RLG00000036490 |
| rosa_multiflora | Rmu_sc0001104.1_g000010 Rmu_sc0025049.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00006970 Rroxscaffold_2G00102040 Rroxscaffold_3G00254370 |
| rosa_rugosa | Rorug05G0433000 Rorug05G0433100 Rorug05G0433200 |
| rosa_samantha | Rh5AG490300 Rh5BG511200 Rh5CG534900 Rh5DG523400 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 1323 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 194 |
| AciI | CCGC | 3 cut(s) | 426, 770, 783 |
| AclI | AACGTT | 1 cut(s) | 75 |
| AclWI | GGATC | 3 cut(s) | 400, 821, 834 |
| AcsI | RAATTY | 2 cut(s) | 952, 1291 |
| AcuI | CTGAAG | 1 cut(s) | 329 |
| AdeI | CACNNNGTG | 1 cut(s) | 191 |
| AfaI | GTAC | 2 cut(s) | 1275, 1461 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 194 |
| AflIII | ACRYGT | 1 cut(s) | 276 |
| AjiI | CACGTC | 1 cut(s) | 279 |
| AjnI | CCWGG | 3 cut(s) | 187, 897, 978 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 577, 609 |
| AleI | CACNNNNGTG | 1 cut(s) | 1056 |
| AluBI | AGCT | 7 cut(s) | 21, 305, 497, 557, 684, 1264, 1307 |
| AluI | AGCT | 7 cut(s) | 21, 305, 497, 557, 684, 1264, 1307 |
| Alw21I | GWGCWC | 2 cut(s) | 559, 1309 |
| Alw26I | GTCTC | 2 cut(s) | 1244, 1434 |
| AlwI | GGATC | 3 cut(s) | 400, 821, 834 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1454 |
| Ama87I | CYCGRG | 1 cut(s) | 965 |
| AoxI | GGCC | 3 cut(s) | 840, 858, 1146 |
| ApeKI | GCWGC | 1 cut(s) | 1286 |
| ApoI | RAATTY | 2 cut(s) | 952, 1291 |
| AspS9I | GGNCC | 2 cut(s) | 1026, 1344 |
| AsuC2I | CCSGG | 1 cut(s) | 1342 |
| AsuHPI | GGTGA | 9 cut(s) | 177, 203, 357, 440, 746, 948, 953, 1051, 1330 |
| AvaI | CYCGRG | 1 cut(s) | 965 |
| AvaII | GGWCC | 2 cut(s) | 1026, 1344 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1443, 1443 |
| BamHI | GGATCC | 1 cut(s) | 826 |
| BanII | GRGCYC | 2 cut(s) | 559, 1309 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 523, 555, 1357, 1389 |
| BauI | CACGAG | 1 cut(s) | 1093 |
| BbsI | GAAGAC | 2 cut(s) | 531, 1128 |
| Bbv12I | GWGCWC | 2 cut(s) | 559, 1309 |
| BbvI | GCAGC | 1 cut(s) | 1273 |
| BccI | CCATC | 6 cut(s) | 80, 188, 425, 715, 851, 1355 |
| BciT130I | CCWGG | 3 cut(s) | 189, 899, 980 |
| BcnI | CCSGG | 1 cut(s) | 1342 |
| BcoDI | GTCTC | 2 cut(s) | 1244, 1434 |
| BfaI | CTAG | 3 cut(s) | 468, 1013, 1265 |
| BfuAI | ACCTGC | 1 cut(s) | 1323 |
| BglII | AGATCT | 2 cut(s) | 262, 1175 |
| BisI | GCNGC | 1 cut(s) | 1287 |
| BlsI | GCNGC | 1 cut(s) | 1288 |
| Bme1390I | CCNGG | 4 cut(s) | 189, 899, 980, 1342 |
| Bme18I | GGWCC | 2 cut(s) | 1026, 1344 |
| BmeT110I | CYCGRG | 1 cut(s) | 965 |
| BmgBI | CACGTC | 1 cut(s) | 279 |
| BmgT120I | GGNCC | 2 cut(s) | 1026, 1344 |
| BmiI | GGNNCC | 3 cut(s) | 828, 1345, 1446 |
| BmrFI | CCNGG | 4 cut(s) | 189, 899, 980, 1342 |
| BmsI | GCATC | 4 cut(s) | 342, 757, 859, 937 |
| BpiI | GAAGAC | 2 cut(s) | 531, 1128 |
| BpmI | CTGGAG | 1 cut(s) | 1022 |
| BpuEI | CTTGAG | 5 cut(s) | 50, 256, 682, 1055, 1293 |
| BpuMI | CCSGG | 1 cut(s) | 1342 |
| Bsa29I | ATCGAT | 1 cut(s) | 1182 |
| BsaBI | GATNNNNATC | 1 cut(s) | 522 |
| BsaJI | CCNNGG | 3 cut(s) | 543, 561, 978 |
| BsaWI | WCCGGW | 2 cut(s) | 214, 367 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 442, 472, 636, 666 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 194 |
| Bse1I | ACTGG | 1 cut(s) | 1005 |
| Bse8I | GATNNNNATC | 1 cut(s) | 522 |
| BseBI | CCWGG | 3 cut(s) | 189, 899, 980 |
| BseCI | ATCGAT | 1 cut(s) | 1182 |
| BseDI | CCNNGG | 3 cut(s) | 543, 561, 978 |
| BseGI | GGATG | 1 cut(s) | 1053 |
| BseJI | GATNNNNATC | 1 cut(s) | 522 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 194 |
| BseMII | CTCAG | 1 cut(s) | 828 |
| BseNI | ACTGG | 1 cut(s) | 1005 |
| BseRI | GAGGAG | 3 cut(s) | 262, 657, 789 |
| BseXI | GCAGC | 1 cut(s) | 1273 |
| BsgI | GTGCAG | 1 cut(s) | 9 |
| BshFI | GGCC | 3 cut(s) | 842, 860, 1148 |
| BshVI | ATCGAT | 1 cut(s) | 1182 |
| BsiHKAI | GWGCWC | 2 cut(s) | 559, 1309 |
| BsiHKCI | CYCGRG | 1 cut(s) | 965 |
| BsiSI | CCGG | 5 cut(s) | 215, 368, 1132, 1341, 1442 |
| BslFI | GGGAC | 1 cut(s) | 1357 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 194 |
| BsmAI | GTCTC | 2 cut(s) | 1244, 1434 |
| BsmBI | CGTCTC | 1 cut(s) | 1244 |
| BsmFI | GGGAC | 1 cut(s) | 1357 |
| BsnI | GGCC | 3 cut(s) | 842, 860, 1148 |
| BsoBI | CYCGRG | 1 cut(s) | 965 |
| Bsp1286I | GDGCHC | 2 cut(s) | 559, 1309 |
| Bsp143I | GATC | 7 cut(s) | 262, 392, 523, 826, 903, 1175, 1368 |
| BspACI | CCGC | 3 cut(s) | 426, 770, 783 |
| BspANI | GGCC | 3 cut(s) | 842, 860, 1148 |
| BspCNI | CTCAG | 1 cut(s) | 827 |
| BspDI | ATCGAT | 1 cut(s) | 1182 |
| BspHI | TCATGA | 1 cut(s) | 931 |
| BspLI | GGNNCC | 3 cut(s) | 828, 1345, 1446 |
| BspMI | ACCTGC | 1 cut(s) | 1323 |
| BspPI | GGATC | 3 cut(s) | 400, 821, 834 |
| BspQI | GCTCTTC | 1 cut(s) | 1230 |
| BsrI | ACTGG | 1 cut(s) | 1005 |
| BssECI | CCNNGG | 3 cut(s) | 543, 561, 978 |
| BssMI | GATC | 7 cut(s) | 262, 392, 523, 826, 903, 1175, 1368 |
| BssSI | CACGAG | 1 cut(s) | 1093 |
| BssT1I | CCWWGG | 1 cut(s) | 561 |
| Bst2BI | CACGAG | 1 cut(s) | 1093 |
| Bst2UI | CCWGG | 3 cut(s) | 189, 899, 980 |
| Bst4CI | ACNGT | 6 cut(s) | 547, 851, 1196, 1392, 1411, 1456 |
| Bst6I | CTCTTC | 4 cut(s) | 305, 1230, 1264, 1349 |
| BstC8I | GCNNGC | 1 cut(s) | 70 |
| BstDEI | CTNAG | 1 cut(s) | 814 |
| BstDSI | CCRYGG | 1 cut(s) | 543 |
| BstF5I | GGATG | 1 cut(s) | 1053 |
| BstKTI | GATC | 7 cut(s) | 265, 395, 526, 829, 906, 1178, 1371 |
| BstMAI | GTCTC | 2 cut(s) | 1244, 1434 |
| BstMBI | GATC | 7 cut(s) | 262, 392, 523, 826, 903, 1175, 1368 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 1261 |
| BstNI | CCWGG | 3 cut(s) | 189, 899, 980 |
| BstNSI | RCATGY | 2 cut(s) | 1012, 1365 |
| BstSCI | CCNGG | 4 cut(s) | 187, 897, 978, 1340 |
| BstV1I | GCAGC | 1 cut(s) | 1273 |
| BstV2I | GAAGAC | 2 cut(s) | 531, 1128 |
| BstX2I | RGATCY | 4 cut(s) | 262, 392, 826, 1175 |
| BstYI | RGATCY | 4 cut(s) | 262, 392, 826, 1175 |
| Bsu15I | ATCGAT | 1 cut(s) | 1182 |
| BsuRI | GGCC | 3 cut(s) | 842, 860, 1148 |
| BsuTUI | ATCGAT | 1 cut(s) | 1182 |
| BtgI | CCRYGG | 1 cut(s) | 543 |
| BtrI | CACGTC | 1 cut(s) | 279 |
| BtsCI | GGATG | 1 cut(s) | 1053 |
| BveI | ACCTGC | 1 cut(s) | 1323 |
| Cac8I | GCNNGC | 1 cut(s) | 70 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1454 |
| CciI | TCATGA | 1 cut(s) | 931 |
| Cfr13I | GGNCC | 2 cut(s) | 1026, 1344 |
| ClaI | ATCGAT | 1 cut(s) | 1182 |
| CseI | GACGC | 1 cut(s) | 1261 |
| CsiI | ACCWGGT | 1 cut(s) | 187 |
| Csp6I | GTAC | 2 cut(s) | 1274, 1460 |
| CviAII | CATG | 7 cut(s) | 341, 932, 1009, 1030, 1247, 1362, 1467 |
| CviQI | GTAC | 2 cut(s) | 1274, 1460 |
| DdeI | CTNAG | 1 cut(s) | 814 |
| DpnI | GATC | 7 cut(s) | 264, 394, 525, 828, 905, 1177, 1370 |
| DpnII | GATC | 7 cut(s) | 262, 392, 523, 826, 903, 1175, 1368 |
| DraIII | CACNNNGTG | 1 cut(s) | 191 |
| Eam1104I | CTCTTC | 4 cut(s) | 305, 1230, 1264, 1349 |
| EarI | CTCTTC | 4 cut(s) | 305, 1230, 1264, 1349 |
| EciI | GGCGGA | 1 cut(s) | 798 |
| Ecl136II | GAGCTC | 2 cut(s) | 557, 1307 |
| Eco130I | CCWWGG | 1 cut(s) | 561 |
| Eco24I | GRGCYC | 2 cut(s) | 559, 1309 |
| Eco47I | GGWCC | 2 cut(s) | 1026, 1344 |
| Eco53kI | GAGCTC | 2 cut(s) | 557, 1307 |
| Eco57I | CTGAAG | 1 cut(s) | 329 |
| Eco88I | CYCGRG | 1 cut(s) | 965 |
| EcoICRI | GAGCTC | 2 cut(s) | 557, 1307 |
| EcoRII | CCWGG | 3 cut(s) | 187, 897, 978 |
| EcoT14I | CCWWGG | 1 cut(s) | 561 |
| EcoT38I | GRGCYC | 2 cut(s) | 559, 1309 |
| ErhI | CCWWGG | 1 cut(s) | 561 |
| Esp3I | CGTCTC | 1 cut(s) | 1244 |
| FaeI | CATG | 7 cut(s) | 344, 935, 1012, 1033, 1250, 1365, 1470 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 858, 890 |
| FaqI | GGGAC | 1 cut(s) | 1357 |
| FatI | CATG | 7 cut(s) | 340, 931, 1008, 1029, 1246, 1361, 1466 |
| FauI | CCCGC | 1 cut(s) | 763 |
| Fnu4HI | GCNGC | 1 cut(s) | 1287 |
| FokI | GGATG | 1 cut(s) | 1040 |
| FriOI | GRGCYC | 2 cut(s) | 559, 1309 |
| Fsp4HI | GCNGC | 1 cut(s) | 1287 |
| FspBI | CTAG | 3 cut(s) | 468, 1013, 1265 |
| GluI | GCNGC | 1 cut(s) | 1287 |
| GsuI | CTGGAG | 1 cut(s) | 1022 |
| HaeIII | GGCC | 3 cut(s) | 842, 860, 1148 |
| HapII | CCGG | 5 cut(s) | 215, 368, 1132, 1341, 1442 |
| HgaI | GACGC | 1 cut(s) | 1261 |
| Hin1II | CATG | 7 cut(s) | 344, 935, 1012, 1033, 1250, 1365, 1470 |
| HincII | GTYRAC | 1 cut(s) | 1407 |
| HindII | GTYRAC | 1 cut(s) | 1407 |
| HpaII | CCGG | 5 cut(s) | 215, 368, 1132, 1341, 1442 |
| HphI | GGTGA | 9 cut(s) | 177, 203, 357, 440, 746, 948, 953, 1051, 1330 |
| Hpy166II | GTNNAC | 4 cut(s) | 167, 347, 985, 1407 |
| Hpy188I | TCNGA | 7 cut(s) | 118, 309, 528, 694, 817, 1164, 1200 |
| Hpy188III | TCNNGA | 8 cut(s) | 661, 699, 875, 907, 932, 1173, 1310, 1351 |
| Hpy8I | GTNNAC | 4 cut(s) | 167, 347, 985, 1407 |
| HpyAV | CCTTC | 3 cut(s) | 658, 773, 1276 |
| HpyCH4III | ACNGT | 6 cut(s) | 547, 851, 1196, 1392, 1411, 1456 |
| HpyCH4IV | ACGT | 4 cut(s) | 75, 278, 749, 1380 |
| HpyCH4V | TGCA | 7 cut(s) | 26, 355, 551, 865, 1289, 1318, 1329 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 1261 |
| HpyF3I | CTNAG | 1 cut(s) | 814 |
| HpySE526I | ACGT | 4 cut(s) | 75, 278, 749, 1380 |
| Hsp92II | CATG | 7 cut(s) | 344, 935, 1012, 1033, 1250, 1365, 1470 |
| Kzo9I | GATC | 7 cut(s) | 262, 392, 523, 826, 903, 1175, 1368 |
| LguI | GCTCTTC | 1 cut(s) | 1230 |
| LmnI | GCTCC | 3 cut(s) | 562, 1428, 1444 |
| Lsp1109I | GCAGC | 1 cut(s) | 1273 |
| LweI | GCATC | 4 cut(s) | 342, 757, 859, 937 |
| MabI | ACCWGGT | 1 cut(s) | 187 |
| MaeI | CTAG | 3 cut(s) | 468, 1013, 1265 |
| MaeII | ACGT | 4 cut(s) | 75, 278, 749, 1380 |
| MaeIII | GTNAC | 5 cut(s) | 363, 458, 809, 973, 1058 |
| MalI | GATC | 7 cut(s) | 264, 394, 525, 828, 905, 1177, 1370 |
| MboI | GATC | 7 cut(s) | 262, 392, 523, 826, 903, 1175, 1368 |
| MfeI | CAATTG | 1 cut(s) | 1433 |
| MflI | RGATCY | 4 cut(s) | 262, 392, 826, 1175 |
| MhlI | GDGCHC | 2 cut(s) | 559, 1309 |
| MluCI | AATT | 6 cut(s) | 148, 893, 952, 1209, 1291, 1433 |
| MlyI | GAGTC | 5 cut(s) | 41, 394, 689, 797, 1232 |
| MseI | TTAA | 5 cut(s) | 270, 408, 833, 1190, 1208 |
| MslI | CAYNNNNRTG | 2 cut(s) | 339, 1056 |
| MspA1I | CMGCKG | 1 cut(s) | 497 |
| MspI | CCGG | 5 cut(s) | 215, 368, 1132, 1341, 1442 |
| MspR9I | CCNGG | 4 cut(s) | 189, 899, 980, 1342 |
| MunI | CAATTG | 1 cut(s) | 1433 |
| MvaI | CCWGG | 3 cut(s) | 189, 899, 980 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 1261 |
| NciI | CCSGG | 1 cut(s) | 1342 |
| NdeII | GATC | 7 cut(s) | 262, 392, 523, 826, 903, 1175, 1368 |
| NlaIII | CATG | 7 cut(s) | 344, 935, 1012, 1033, 1250, 1365, 1470 |
| NlaIV | GGNNCC | 3 cut(s) | 828, 1345, 1446 |
| NmeAIII | GCCGAG | 1 cut(s) | 1174 |
| NmuCI | GTSAC | 2 cut(s) | 363, 1058 |
| NspI | RCATGY | 2 cut(s) | 1012, 1365 |
| OliI | CACNNNNGTG | 1 cut(s) | 1056 |
| PagI | TCATGA | 1 cut(s) | 931 |
| PciSI | GCTCTTC | 1 cut(s) | 1230 |
| PfeI | GAWTC | 6 cut(s) | 55, 182, 464, 689, 1046, 1067 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 194 |
| PfoI | TCCNGGA | 1 cut(s) | 897 |
| PkrI | GCNGC | 1 cut(s) | 1288 |
| PleI | GAGTC | 5 cut(s) | 40, 393, 689, 796, 1231 |
| PpsI | GAGTC | 5 cut(s) | 40, 393, 689, 796, 1231 |
| Psp124BI | GAGCTC | 2 cut(s) | 559, 1309 |
| Psp1406I | AACGTT | 1 cut(s) | 75 |
| Psp6I | CCWGG | 3 cut(s) | 187, 897, 978 |
| PspGI | CCWGG | 3 cut(s) | 187, 897, 978 |
| PspN4I | GGNNCC | 3 cut(s) | 828, 1345, 1446 |
| PspPI | GGNCC | 2 cut(s) | 1026, 1344 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1454 |
| PsuI | RGATCY | 4 cut(s) | 262, 392, 826, 1175 |
| PvuII | CAGCTG | 1 cut(s) | 497 |
| RsaI | GTAC | 2 cut(s) | 1275, 1461 |
| RsaNI | GTAC | 2 cut(s) | 1274, 1460 |
| RseI | CAYNNNNRTG | 2 cut(s) | 339, 1056 |
| SacI | GAGCTC | 2 cut(s) | 559, 1309 |
| SapI | GCTCTTC | 1 cut(s) | 1230 |
| SaqAI | TTAA | 5 cut(s) | 270, 408, 833, 1190, 1208 |
| SatI | GCNGC | 1 cut(s) | 1287 |
| Sau3AI | GATC | 7 cut(s) | 262, 392, 523, 826, 903, 1175, 1368 |
| Sau96I | GGNCC | 2 cut(s) | 1026, 1344 |
| SchI | GAGTC | 5 cut(s) | 41, 394, 689, 797, 1232 |
| ScrFI | CCNGG | 4 cut(s) | 189, 899, 980, 1342 |
| SduI | GDGCHC | 2 cut(s) | 559, 1309 |
| SexAI | ACCWGGT | 1 cut(s) | 187 |
| SfaNI | GCATC | 4 cut(s) | 342, 757, 859, 937 |
| SinI | GGWCC | 2 cut(s) | 1026, 1344 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 339, 1056 |
| SmlI | CTYRAG | 5 cut(s) | 29, 235, 697, 1034, 1308 |
| SmoI | CTYRAG | 5 cut(s) | 29, 235, 697, 1034, 1308 |
| Sse9I | AATT | 6 cut(s) | 148, 893, 952, 1209, 1291, 1433 |
| SsiI | CCGC | 3 cut(s) | 426, 770, 783 |
| SspMI | CTAG | 3 cut(s) | 468, 1013, 1265 |
| SstI | GAGCTC | 2 cut(s) | 559, 1309 |
| StyD4I | CCNGG | 4 cut(s) | 187, 897, 978, 1340 |
| StyI | CCWWGG | 1 cut(s) | 561 |
| TaaI | ACNGT | 6 cut(s) | 547, 851, 1196, 1392, 1411, 1456 |
| TaiI | ACGT | 4 cut(s) | 78, 281, 752, 1383 |
| TaqI | TCGA | 5 cut(s) | 140, 654, 660, 791, 1182 |
| TasI | AATT | 6 cut(s) | 148, 893, 952, 1209, 1291, 1433 |
| TatI | WGTACW | 1 cut(s) | 1273 |
| TfiI | GAWTC | 6 cut(s) | 55, 182, 464, 689, 1046, 1067 |
| Tru1I | TTAA | 5 cut(s) | 270, 408, 833, 1190, 1208 |
| Tru9I | TTAA | 5 cut(s) | 270, 408, 833, 1190, 1208 |
| TseFI | GTSAC | 2 cut(s) | 363, 1058 |
| TseI | GCWGC | 1 cut(s) | 1286 |
| Tsp45I | GTSAC | 2 cut(s) | 363, 1058 |
| TspDTI | ATGAA | 6 cut(s) | 834, 927, 948, 1217, 1230, 1365 |
| TspGWI | ACGGA | 2 cut(s) | 815, 1046 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 194 |
| VpaK11BI | GGWCC | 2 cut(s) | 1026, 1344 |
| XapI | RAATTY | 2 cut(s) | 952, 1291 |
| XceI | RCATGY | 2 cut(s) | 1012, 1365 |
| XspI | CTAG | 3 cut(s) | 468, 1013, 1265 |