Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0007861

Physical Location & Seq

Genomic Coordinates Reverse (-)

4007605 .. 4011155

Gene Structure 3551 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1046100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1764 bp

ATGGATTTGGAAAATGAATCTGTGGAAGATATTGTAGTAAACCCACGAACAGTTTCCAATTCTGCTGCTGCTGATGGCGATGGCGACAGTAGTAGTTCGATTAGGAACAATGGGTCATGTGGTAGTGAGATTGGAAATGCAGGAGAGAGTAGAGATAATGATGGTGGCACTGAACAATTAGTGAATTCGAGTCCGCTGGCAGCCAAATCTCCCGGTGGGGGGTCACCTCCAACCGTCAAAGGGCGCGGCTTAAGGAAGTGGAGAAGAATTAAGAGAAATTTTGCCAAGGGTGATAAGGACAATGCAGTTGATGATTCTAGTAAAGTTTTGAAGCGGGGTTTGTCCGGTAATGGAAGCCCAGTTAAGTCGAAGAATTCACCCATTGAGATCAGACATAATACTAGGGAAGGTTCTGTTGGATCCGTGAATATGTTAAGAAATGTGGGAGTTGTCGATGGCTTTGCCATTCCTGGTTCAAGTTCGGATTCTAGATTTTCTGTTGGTACTGCATTTGCTGCTGGTGCAGATTCTGAGAACAGTGAGGATCGGAGTAGCAAGTCTTCGACCGCTGCCAGTGTTCCAAAGCCCAAGTTTGAGCTGCCTGCAGCATTTGTGCATGCGCGGGATAAGAGCAAGATGAAGAGTACTAGCGGGAAGAGTGTGAGTAATTCAGCTCAAAGGGCTCAACAGGGAAAGACACAAGTCGAAAGTAGTAAGAAGCATAGAGGAGACAGGGGCACAATCGAGATGGAAAACTCTTATTCAAGCATGGAATCTGACTCAAGAAGCTCCAACTTTGTCTTTATGCAGAGTCCGATTTTGACTAGTAATGGGAAGCAAAGTGGAAGGTCAATGAGTCATGATGGAGAAAACAGTGATGAAGTTCATGCAAGTGAACCACATCCAACAGACTTGCCGTGGATGGCTAATGGAGGAACAAATAAGAATCATAGGTCCTTGACAGATCAAGATCCACTGGTCGAGTCTATCCTTAATCTCCATTCTGTACAAGAAGCACTTGCTAAAGAGGTTCAGAAATTTGGGGAGATTGGGAAGGAAATTTTGTCAACGGATTCTAATGGTGGTGGTATACCTGCCGATATCTATTCAAGTGATCTGGGAATTAATGAATCTAACTTATCTGACTATTTGGGTTCTGATAAGATTGGACAAACTTCTTCGAATTCCTTGGAATCTCAGGTCTTGAGTTTGAAACAAAATGTGAAGCTTTTGGAAAGCACACTGGATGAGACAAGAGCTATACTGGAATTGAAGGAATCCAGGGTTGCTGAACTCGAAGATATGATTAACATTAGCAAGTCTGCAAAAGAAGATTCAGGTAGTACCGTAGGTCTAGAGGAGGAAAAAAGTCGAGAGCTAGAAACTGAACTTGACGGTGTGTTTAGGCAAATGATTGAAGCCCAGGTCGAGTTTATTGCTATTAAAAGTTCCACACAGAGGTTGAAGTTTGCTGCAGGTGGCCAAATCGCACTGCTTGATGAGCAAGAAGCAGTAGTTGGAGAACAAGAACAGATGCTGAACAAGCTTGGGGAAGTAGAAATTAGGGCCACAAAGCTAAAGGAACGAACAGAGGAGTTGGGAAAATTATCCGGAGATATTTTAGAGACCGAAGAGGTCTTCACCATCCAGAAGAGATTTTGTAAGATTACTTCATGTCTTTTTATTCAGTTGATATTGCTGGGCTTGGCGATCTTGGTTTTTTTCTCGCAGTCGTCCCATCAAGGGGTGGCAGTACCCACCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005635 GO:0005737 GO:0006996 GO:0006997 GO:0008150 GO:0009504 GO:0009987 GO:0012505 GO:0016043 GO:0031967 GO:0031975 GO:0042802 GO:0042803 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046982 GO:0046983 GO:0071840

KEGG Pathways

Metabolic & Signaling

ko04260 ko04261 ko05410 ko05414 map04260 map04261 map05410 map05414

Pfam Domains

Protein Families

No domains found.

Protein Analysis

588

Amino Acids

63.02

Weight (kDa)

5.24

Isoelectric Point (pI)

51.26

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007861)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G26455 AT5G56210
fragaria_vesca	FvH4_3g41590 FvH4_3g41590
malus_domestica	MD03G1043100.v1.1 MD11G1046100.v1.1
prunus_persica	Prupe.6G035500_v2.0.a1 Prupe.6G035500_v2.0.a1
pyrus_communis	pycom03g03330 pycom11g03740
rosa_chinensis	RchiOBHm_Chr5g0074601
rosa_laevigata	RLG00000036490
rosa_multiflora	Rmu_sc0001104.1_g000010 Rmu_sc0025049.1_g000003
rosa_roxburghii	Rroxscaffold_1G00006970 Rroxscaffold_2G00102040 Rroxscaffold_3G00254370
rosa_rugosa	Rorug05G0433000 Rorug05G0433100 Rorug05G0433200
rosa_samantha	Rh5AG490300 Rh5BG511200 Rh5CG534900 Rh5DG523400

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1466
Acc36I	ACCTGC	2 cut(s)	1102, 1466
AccI	GTMKAC	1 cut(s)	1090
AccII	CGCG	2 cut(s)	246, 622
AccIII	TCCGGA	1 cut(s)	1610
AciI	CCGC	6 cut(s)	194, 246, 334, 567, 622, 651
AclWI	GGATC	4 cut(s)	414, 427, 552, 965
AcoI	YGGCCR	1 cut(s)	1480
AcsI	RAATTY	6 cut(s)	184, 277, 373, 1037, 1059, 1183
AfaI	GTAC	5 cut(s)	505, 646, 1008, 1345, 1755
AfiI	CCNNNNNNNGG	6 cut(s)	218, 219, 240, 1458, 1743, 1744
AflII	CTTAAG	1 cut(s)	250
AgsI	TTSAA	8 cut(s)	331, 477, 765, 1110, 1213, 1273, 1418, 1465
AhlI	ACTAGT	1 cut(s)	824
AjnI	CCWGG	3 cut(s)	469, 1280, 1422
AjuI	GAANNNNNNNTTGG	4 cut(s)	399, 431, 1500, 1532
AluBI	AGCT	8 cut(s)	598, 674, 789, 1228, 1259, 1378, 1546, 1576
AluI	AGCT	8 cut(s)	598, 674, 789, 1228, 1259, 1378, 1546, 1576
Alw26I	GTCTC	3 cut(s)	723, 1244, 1619
AlwI	GGATC	4 cut(s)	414, 427, 552, 965
AlwNI	CAGNNNCTG	2 cut(s)	530, 1537
Aor13HI	TCCGGA	1 cut(s)	1610
AoxI	GGCC	2 cut(s)	1480, 1566
ApeKI	GCWGC	8 cut(s)	65, 68, 200, 515, 569, 598, 605, 1472
ApoI	RAATTY	6 cut(s)	184, 277, 373, 1037, 1059, 1183
AseI	ATTAAT	1 cut(s)	1125
Asp700I	GAANNNNTTC	1 cut(s)	52
AspLEI	GCGC	2 cut(s)	246, 622
AspS9I	GGNCC	2 cut(s)	954, 1566
AsuC2I	CCSGG	1 cut(s)	213
AsuHPI	GGTGA	4 cut(s)	216, 302, 369, 1633
AsuII	TTCGAA	1 cut(s)	1181
AvaII	GGWCC	1 cut(s)	954
BaeGI	GKGCMC	1 cut(s)	740
BalI	TGGCCA	1 cut(s)	1482
BamHI	GGATCC	1 cut(s)	419
BanII	GRGCYC	1 cut(s)	685
BarI	GAAGNNNNNNTAC	4 cut(s)	544, 576, 1654, 1686
BbsI	GAAGAC	2 cut(s)	552, 1630
BbvI	GCAGC	8 cut(s)	52, 55, 212, 502, 556, 585, 617, 1459
BccI	CCATC	9 cut(s)	68, 74, 155, 449, 742, 857, 916, 1652, 1746
BceAI	ACGGC	1 cut(s)	901
BcgI	CGANNNNNNTGC	4 cut(s)	443, 477, 1418, 1452
BciT130I	CCWGG	3 cut(s)	471, 1282, 1424
BcnI	CCSGG	1 cut(s)	213
BcoDI	GTCTC	3 cut(s)	723, 1244, 1619
BcuI	ACTAGT	1 cut(s)	824
BfaI	CTAG	7 cut(s)	318, 402, 489, 648, 825, 1355, 1379
BfmI	CTRYAG	2 cut(s)	603, 1473
BfrI	CTTAAG	1 cut(s)	250
BfuAI	ACCTGC	2 cut(s)	1102, 1466
BisI	GCNGC	9 cut(s)	66, 69, 201, 247, 516, 570, 599, 606, 1473
BlsI	GCNGC	9 cut(s)	67, 70, 202, 248, 517, 571, 600, 607, 1474
BmcAI	AGTACT	1 cut(s)	646
Bme1390I	CCNGG	4 cut(s)	213, 471, 1282, 1424
Bme18I	GGWCC	1 cut(s)	954
BmgT120I	GGNCC	2 cut(s)	954, 1566
BmiI	GGNNCC	1 cut(s)	421
BmrFI	CCNGG	4 cut(s)	213, 471, 1282, 1424
BmrI	ACTGGG	1 cut(s)	353
BmsI	GCATC	1 cut(s)	1524
BmuI	ACTGGG	1 cut(s)	353
BoxI	GACNNNNGTC	1 cut(s)	701
BpiI	GAAGAC	2 cut(s)	552, 1630
Bpu14I	TTCGAA	1 cut(s)	1181
BpuEI	CTTGAG	2 cut(s)	766, 1225
BpuMI	CCSGG	1 cut(s)	213
BsaBI	GATNNNNATC	1 cut(s)	969
BsaI	GGTCTC	1 cut(s)	1619
BsaJI	CCNNGG	5 cut(s)	285, 917, 1188, 1281, 1422
BsaWI	WCCGGW	2 cut(s)	344, 1610
Bsc4I	CCNNNNNNNGG	6 cut(s)	218, 219, 240, 1458, 1743, 1744
Bse1I	ACTGG	5 cut(s)	359, 573, 981, 1248, 1269
Bse8I	GATNNNNATC	1 cut(s)	969
BseAI	TCCGGA	1 cut(s)	1610
BseBI	CCWGG	3 cut(s)	471, 1282, 1424
BseDI	CCNNGG	5 cut(s)	285, 917, 1188, 1281, 1422
BseGI	GGATG	4 cut(s)	901, 927, 1252, 1644
BseJI	GATNNNNATC	1 cut(s)	969
BseLI	CCNNNNNNNGG	6 cut(s)	218, 219, 240, 1458, 1743, 1744
BseMII	CTCAG	2 cut(s)	522, 1211
BseNI	ACTGG	5 cut(s)	359, 573, 981, 1248, 1269
BseRI	GAGGAG	3 cut(s)	741, 1373, 1607
BseSI	GKGCMC	1 cut(s)	740
BseXI	GCAGC	8 cut(s)	52, 55, 212, 502, 556, 585, 617, 1459
BseYI	CCCAGC	1 cut(s)	1699
BsgI	GTGCAG	1 cut(s)	543
Bsh1236I	CGCG	2 cut(s)	246, 622
Bsh1285I	CGRYCG	1 cut(s)	567
BshFI	GGCC	2 cut(s)	1482, 1568
BsiEI	CGRYCG	1 cut(s)	567
BsiSI	CCGG	3 cut(s)	213, 345, 1611
BslFI	GGGAC	1 cut(s)	1720
BslI	CCNNNNNNNGG	6 cut(s)	218, 219, 240, 1458, 1743, 1744
BsmAI	GTCTC	3 cut(s)	723, 1244, 1619
BsmFI	GGGAC	1 cut(s)	1720
BsnI	GGCC	2 cut(s)	1482, 1568
Bso31I	GGTCTC	1 cut(s)	1619
Bsp119I	TTCGAA	1 cut(s)	1181
Bsp1286I	GDGCHC	2 cut(s)	685, 740
Bsp13I	TCCGGA	1 cut(s)	1610
Bsp1407I	TGTACA	1 cut(s)	1006
Bsp143I	GATC	7 cut(s)	387, 419, 544, 964, 970, 1114, 1710
BspACI	CCGC	6 cut(s)	194, 246, 334, 567, 622, 651
BspANI	GGCC	2 cut(s)	1482, 1568
BspCNI	CTCAG	2 cut(s)	523, 1210
BspEI	TCCGGA	1 cut(s)	1610
BspFNI	CGCG	2 cut(s)	246, 622
BspHI	TCATGA	1 cut(s)	859
BspLI	GGNNCC	1 cut(s)	421
BspMAI	CTGCAG	2 cut(s)	607, 1477
BspMI	ACCTGC	2 cut(s)	1102, 1466
BspPI	GGATC	4 cut(s)	414, 427, 552, 965
BspT104I	TTCGAA	1 cut(s)	1181
BspTI	CTTAAG	1 cut(s)	250
BspTNI	GGTCTC	1 cut(s)	1619
BsrGI	TGTACA	1 cut(s)	1006
BsrI	ACTGG	5 cut(s)	359, 573, 981, 1248, 1269
BssECI	CCNNGG	5 cut(s)	285, 917, 1188, 1281, 1422
BssMI	GATC	7 cut(s)	387, 419, 544, 964, 970, 1114, 1710
BssNAI	GTATAC	1 cut(s)	1091
BssT1I	CCWWGG	2 cut(s)	285, 1188
Bst1107I	GTATAC	1 cut(s)	1091
Bst2UI	CCWGG	3 cut(s)	471, 1282, 1424
Bst4CI	ACNGT	7 cut(s)	52, 89, 235, 539, 875, 1348, 1397
Bst6I	CTCTTC	4 cut(s)	635, 650, 1626, 1646
BstAFI	CTTAAG	1 cut(s)	250
BstAPI	GCANNNNNTGC	1 cut(s)	515
BstAUI	TGTACA	1 cut(s)	1006
BstBI	TTCGAA	1 cut(s)	1181
BstC8I	GCNNGC	3 cut(s)	198, 603, 618
BstDEI	CTNAG	2 cut(s)	531, 1197
BstDSI	CCRYGG	1 cut(s)	917
BstEII	GGTNACC	1 cut(s)	222
BstF5I	GGATG	4 cut(s)	901, 927, 1252, 1644
BstFNI	CGCG	2 cut(s)	246, 622
BstHHI	GCGC	2 cut(s)	246, 622
BstKTI	GATC	7 cut(s)	390, 422, 547, 967, 973, 1117, 1713
BstMAI	GTCTC	3 cut(s)	723, 1244, 1619
BstMBI	GATC	7 cut(s)	387, 419, 544, 964, 970, 1114, 1710
BstMCI	CGRYCG	1 cut(s)	567
BstMWI	GCNNNNNNNGC	5 cut(s)	515, 521, 680, 1501, 1543
BstNI	CCWGG	3 cut(s)	471, 1282, 1424
BstNSI	RCATGY	1 cut(s)	620
BstPAI	GACNNNNGTC	1 cut(s)	701
BstPI	GGTNACC	1 cut(s)	222
BstSCI	CCNGG	4 cut(s)	211, 469, 1280, 1422
BstSFI	CTRYAG	2 cut(s)	603, 1473
BstSLI	GKGCMC	1 cut(s)	740
BstUI	CGCG	2 cut(s)	246, 622
BstV1I	GCAGC	8 cut(s)	52, 55, 212, 502, 556, 585, 617, 1459
BstV2I	GAAGAC	2 cut(s)	552, 1630
BstX2I	RGATCY	2 cut(s)	419, 970
BstYI	RGATCY	2 cut(s)	419, 970
BstZ17I	GTATAC	1 cut(s)	1091
BsuRI	GGCC	2 cut(s)	1482, 1568
BtgI	CCRYGG	1 cut(s)	917
BtgZI	GCGATG	1 cut(s)	93
BtsCI	GGATG	4 cut(s)	901, 927, 1252, 1644
BtsI	GCAGTG	1 cut(s)	1490
BtsIMutI	CAGTG	7 cut(s)	168, 544, 580, 880, 974, 1241, 1490
BveI	ACCTGC	2 cut(s)	1102, 1466
Cac8I	GCNNGC	3 cut(s)	198, 603, 618
CaiI	CAGNNNCTG	2 cut(s)	530, 1537
CciI	TCATGA	1 cut(s)	859
CfoI	GCGC	2 cut(s)	246, 622
Cfr13I	GGNCC	2 cut(s)	954, 1566
Csp6I	GTAC	5 cut(s)	504, 645, 1007, 1344, 1754
CviAII	CATG	6 cut(s)	117, 617, 769, 860, 887, 1674
CviQI	GTAC	5 cut(s)	504, 645, 1007, 1344, 1754
DdeI	CTNAG	2 cut(s)	531, 1197
DpnI	GATC	7 cut(s)	389, 421, 546, 966, 972, 1116, 1712
DpnII	GATC	7 cut(s)	387, 419, 544, 964, 970, 1114, 1710
EaeI	YGGCCR	1 cut(s)	1480
Eam1104I	CTCTTC	4 cut(s)	635, 650, 1626, 1646
EarI	CTCTTC	4 cut(s)	635, 650, 1626, 1646
Eco130I	CCWWGG	2 cut(s)	285, 1188
Eco24I	GRGCYC	1 cut(s)	685
Eco31I	GGTCTC	1 cut(s)	1619
Eco32I	GATATC	1 cut(s)	1102
Eco47I	GGWCC	1 cut(s)	954
Eco91I	GGTNACC	1 cut(s)	222
EcoO109I	RGGNCCY	1 cut(s)	954
EcoO65I	GGTNACC	1 cut(s)	222
EcoRI	GAATTC	3 cut(s)	184, 373, 1183
EcoRII	CCWGG	3 cut(s)	469, 1280, 1422
EcoRV	GATATC	1 cut(s)	1102
EcoT14I	CCWWGG	2 cut(s)	285, 1188
EcoT38I	GRGCYC	1 cut(s)	685
ErhI	CCWWGG	2 cut(s)	285, 1188
FaeI	CATG	6 cut(s)	120, 620, 772, 863, 890, 1677
FalI	AAGNNNNNCTT	2 cut(s)	1002, 1034
FaqI	GGGAC	1 cut(s)	1720
FatI	CATG	6 cut(s)	116, 616, 768, 859, 886, 1673
FauI	CCCGC	3 cut(s)	327, 615, 644
FblI	GTMKAC	1 cut(s)	1090
Fnu4HI	GCNGC	9 cut(s)	66, 69, 201, 247, 516, 570, 599, 606, 1473
FokI	GGATG	4 cut(s)	888, 934, 1259, 1631
FriOI	GRGCYC	1 cut(s)	685
Fsp4HI	GCNGC	9 cut(s)	66, 69, 201, 247, 516, 570, 599, 606, 1473
FspBI	CTAG	7 cut(s)	318, 402, 489, 648, 825, 1355, 1379
GlaI	GCGC	2 cut(s)	245, 621
GluI	GCNGC	9 cut(s)	66, 69, 201, 247, 516, 570, 599, 606, 1473
GsaI	CCCAGC	1 cut(s)	1703
HaeIII	GGCC	2 cut(s)	1482, 1568
HapII	CCGG	3 cut(s)	213, 345, 1611
HhaI	GCGC	2 cut(s)	246, 622
Hin1II	CATG	6 cut(s)	120, 620, 772, 863, 890, 1677
Hin6I	GCGC	2 cut(s)	244, 620
HinP1I	GCGC	2 cut(s)	244, 620
HincII	GTYRAC	1 cut(s)	1068
HindII	GTYRAC	1 cut(s)	1068
HindIII	AAGCTT	2 cut(s)	1226, 1544
HpaII	CCGG	3 cut(s)	213, 345, 1611
HphI	GGTGA	4 cut(s)	216, 302, 369, 1633
Hpy166II	GTNNAC	4 cut(s)	40, 896, 1068, 1091
Hpy188I	TCNGA	9 cut(s)	392, 484, 532, 549, 778, 816, 1035, 1144, 1159
Hpy8I	GTNNAC	4 cut(s)	40, 896, 1068, 1091
HpyAV	CCTTC	4 cut(s)	401, 840, 1048, 1267
HpyCH4III	ACNGT	7 cut(s)	52, 89, 235, 539, 875, 1348, 1397
HpyF10VI	GCNNNNNNNGC	5 cut(s)	515, 521, 680, 1501, 1543
HpyF3I	CTNAG	2 cut(s)	531, 1197
Hsp92II	CATG	6 cut(s)	120, 620, 772, 863, 890, 1677
HspAI	GCGC	2 cut(s)	244, 620
Kpn2I	TCCGGA	1 cut(s)	1610
Kzo9I	GATC	7 cut(s)	387, 419, 544, 964, 970, 1114, 1710
LmnI	GCTCC	1 cut(s)	794
Lsp1109I	GCAGC	8 cut(s)	52, 55, 212, 502, 556, 585, 617, 1459
LweI	GCATC	1 cut(s)	1524
MaeI	CTAG	7 cut(s)	318, 402, 489, 648, 825, 1355, 1379
MaeIII	GTNAC	1 cut(s)	222
MalI	GATC	7 cut(s)	389, 421, 546, 966, 972, 1116, 1712
MboI	GATC	7 cut(s)	387, 419, 544, 964, 970, 1114, 1710
MflI	RGATCY	2 cut(s)	419, 970
MhlI	GDGCHC	2 cut(s)	685, 740
MlsI	TGGCCA	1 cut(s)	1482
MluNI	TGGCCA	1 cut(s)	1482
MlyI	GAGTC	5 cut(s)	199, 773, 820, 865, 992
MmeI	TCCRAC	5 cut(s)	254, 397, 816, 929, 1498
Mox20I	TGGCCA	1 cut(s)	1482
MroI	TCCGGA	1 cut(s)	1610
MroXI	GAANNNNTTC	1 cut(s)	52
MscI	TGGCCA	1 cut(s)	1482
MseI	TTAA	8 cut(s)	251, 270, 363, 434, 993, 1125, 1308, 1443
MslI	CAYNNNNRTG	1 cut(s)	891
Msp20I	TGGCCA	1 cut(s)	1482
MspA1I	CMGCKG	2 cut(s)	196, 569
MspCI	CTTAAG	1 cut(s)	250
MspI	CCGG	3 cut(s)	213, 345, 1611
MspR9I	CCNGG	4 cut(s)	213, 471, 1282, 1424
MvaI	CCWGG	3 cut(s)	471, 1282, 1424
MvnI	CGCG	2 cut(s)	246, 622
MwoI	GCNNNNNNNGC	5 cut(s)	515, 521, 680, 1501, 1543
NciI	CCSGG	1 cut(s)	213
NdeII	GATC	7 cut(s)	387, 419, 544, 964, 970, 1114, 1710
NlaIII	CATG	6 cut(s)	120, 620, 772, 863, 890, 1677
NlaIV	GGNNCC	1 cut(s)	421
NmuCI	GTSAC	1 cut(s)	222
NspI	RCATGY	1 cut(s)	620
NspV	TTCGAA	1 cut(s)	1181
PaeI	GCATGC	1 cut(s)	620
PagI	TCATGA	1 cut(s)	859
PaqCI	CACCTGC	1 cut(s)	1466
PdmI	GAANNNNTTC	1 cut(s)	52
PkrI	GCNGC	9 cut(s)	67, 70, 202, 248, 517, 571, 600, 607, 1474
PleI	GAGTC	5 cut(s)	198, 773, 819, 864, 991
PpsI	GAGTC	5 cut(s)	198, 773, 819, 864, 991
PpuMI	RGGWCCY	1 cut(s)	954
PshAI	GACNNNNGTC	1 cut(s)	701
PshBI	ATTAAT	1 cut(s)	1125
Psp5II	RGGWCCY	1 cut(s)	954
Psp6I	CCWGG	3 cut(s)	469, 1280, 1422
PspEI	GGTNACC	1 cut(s)	222
PspFI	CCCAGC	1 cut(s)	1699
PspGI	CCWGG	3 cut(s)	469, 1280, 1422
PspN4I	GGNNCC	1 cut(s)	421
PspPI	GGNCC	2 cut(s)	954, 1566
PspPPI	RGGWCCY	1 cut(s)	954
PstI	CTGCAG	2 cut(s)	607, 1477
PstNI	CAGNNNCTG	2 cut(s)	530, 1537
PsuI	RGATCY	2 cut(s)	419, 970
RsaI	GTAC	5 cut(s)	505, 646, 1008, 1345, 1755
RsaNI	GTAC	5 cut(s)	504, 645, 1007, 1344, 1754
RseI	CAYNNNNRTG	1 cut(s)	891
SaqAI	TTAA	8 cut(s)	251, 270, 363, 434, 993, 1125, 1308, 1443
SatI	GCNGC	9 cut(s)	66, 69, 201, 247, 516, 570, 599, 606, 1473
Sau3AI	GATC	7 cut(s)	387, 419, 544, 964, 970, 1114, 1710
Sau96I	GGNCC	2 cut(s)	954, 1566
ScaI	AGTACT	1 cut(s)	646
SchI	GAGTC	5 cut(s)	199, 773, 820, 865, 992
ScrFI	CCNGG	4 cut(s)	213, 471, 1282, 1424
SduI	GDGCHC	2 cut(s)	685, 740
SfaNI	GCATC	1 cut(s)	1524
SfcI	CTRYAG	2 cut(s)	603, 1473
SfuI	TTCGAA	1 cut(s)	1181
SinI	GGWCC	1 cut(s)	954
SmiMI	CAYNNNNRTG	1 cut(s)	891
SmlI	CTYRAG	3 cut(s)	250, 781, 1204
SmoI	CTYRAG	3 cut(s)	250, 781, 1204
SpeI	ACTAGT	1 cut(s)	824
SphI	GCATGC	1 cut(s)	620
SsiI	CCGC	6 cut(s)	194, 246, 334, 567, 622, 651
SspMI	CTAG	7 cut(s)	318, 402, 489, 648, 825, 1355, 1379
StyD4I	CCNGG	4 cut(s)	211, 469, 1280, 1422
StyI	CCWWGG	2 cut(s)	285, 1188
TaaI	ACNGT	7 cut(s)	52, 89, 235, 539, 875, 1348, 1397
TaqII	GACCGA	1 cut(s)	1643
TatI	WGTACW	2 cut(s)	644, 1006
TauI	GCSGC	1 cut(s)	249
Tru1I	TTAA	8 cut(s)	251, 270, 363, 434, 993, 1125, 1308, 1443
Tru9I	TTAA	8 cut(s)	251, 270, 363, 434, 993, 1125, 1308, 1443
TscAI	CASTG	7 cut(s)	175, 544, 580, 880, 981, 1248, 1497
TseFI	GTSAC	1 cut(s)	222
TseI	GCWGC	8 cut(s)	65, 68, 200, 515, 569, 598, 605, 1472
Tsp45I	GTSAC	1 cut(s)	222
TspDTI	ATGAA	6 cut(s)	30, 653, 875, 894, 1143, 1662
TspGWI	ACGGA	2 cut(s)	412, 1085
TspRI	CASTG	7 cut(s)	175, 544, 580, 880, 981, 1248, 1497
Vha464I	CTTAAG	1 cut(s)	250
VpaK11BI	GGWCC	1 cut(s)	954
VspI	ATTAAT	1 cut(s)	1125
XapI	RAATTY	6 cut(s)	184, 277, 373, 1037, 1059, 1183
XbaI	TCTAGA	2 cut(s)	488, 1354
XceI	RCATGY	1 cut(s)	620
XmiI	GTMKAC	1 cut(s)	1090
XmnI	GAANNNNTTC	1 cut(s)	52
XspI	CTAG	7 cut(s)	318, 402, 489, 648, 825, 1355, 1379
ZrmI	AGTACT	1 cut(s)	646

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.